mRNA_P-wetherbeei_contig16283.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16283.1.3
Unique NamemRNA_P-wetherbeei_contig16283.1.3
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16283.1.3 vs. uniprot
Match: A0A6H5JAZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAZ7_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 1.280e-26
Identity = 60/142 (42.25%), Postives = 86/142 (60.56%), Query Frame = 1
Query:    7 PILEIDGVVLPQSVAILRFAGREAGLYPVNDPVAAAQCDAVIDGLTDIQVRSKREIEQKMEVMESERLKAVLRKELNDTILPASLAQFQRLLLASGKGDWFVGDRMSIADIAVSTRLKWFRSGVLDGIEVGVCDAFPALVAL 432
            P+LE+DG V+PQSVAILR+ G+   LYP NDP+ AA  D+ +D ++DI    +  I +K         KA LRK+L +T+LP  L   ++ L  +G G +F GD++SI DIAV  RL W   G  +G+   + + FP L +L
Sbjct:    2 PVLEVDGAVIPQSVAILRYVGKMGNLYP-NDPIQAAFADSAVDAVSDIHGYMRGIIFEK-----DADAKAQLRKDLVETLLPPWLTNSEKALKLAG-GKYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLEEFPLLSSL 136          
BLAST of mRNA_P-wetherbeei_contig16283.1.3 vs. uniprot
Match: D8LHF0_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHF0_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 2.630e-25
Identity = 59/144 (40.97%), Postives = 92/144 (63.89%), Query Frame = 1
Query:    1 KVPILEIDGVVLPQSVAILRFAGREAGLYPVNDPVAAAQCDAVIDGLTDIQVRSKREIEQKMEVMESERLKAVLRKELNDTILPASLAQFQRLLLASGKGDWFVGDRMSIADIAVSTRLKWFRSGVLDGIEVGVCDAFPALVAL 432
            ++P+LE+DG V+PQS+AILR+ G+   LYP  DP+ AA  D+  D ++DIQ   +  I +K    ++++ KA LRK+L +T+LP  LA  ++ L  +G G++F GD++SI DIAV  RL W   G  +G+   + D  P + +L
Sbjct:   50 QMPVLEVDGAVIPQSLAILRYVGKIGNLYP-TDPIQAAFADSATDAVSDIQGYMRGIIFEK----DADK-KAQLRKDLVETLLPTWLANLEKALKLAG-GEYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPLVSSL 186          
BLAST of mRNA_P-wetherbeei_contig16283.1.3 vs. uniprot
Match: A0A382CNQ0_9ZZZZ (Uncharacterized protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382CNQ0_9ZZZZ)

HSP 1 Score: 93.6 bits (231), Expect = 7.080e-21
Identity = 46/141 (32.62%), Postives = 86/141 (60.99%), Query Frame = 1
Query:    1 KVPILEIDGVVLPQSVAILRFAGREAGLYPVNDPVAAAQCDAVIDGLTDIQVRSKREIEQKMEVMESERLKAVLRKELNDTILPASLAQFQRLLLASGKGDWFVGDRMSIADIAVSTRLKWFRSGVLDGIEVGVCDAFPAL 423
            ++P+LE+DG ++ Q+  I R+ G+ + LYP +D + A++ D +ID  TDI       + +K      + +K  +R++L + +LP      +++L  +   +WFV ++MSIADIA+   L WF+SG+L+G+   + +++P L
Sbjct:   58 QLPVLEVDGEIIGQTAGIARYCGKLSNLYPKDD-LLASKVDQIIDTATDITNLVSPTVREK-----DKNIKRKMREKLTNKLLPRWFTYLEKILEKNKHSNWFVDNKMSIADIAIWRLLGWFKSGILEGVPTDISESYPKL 192          
BLAST of mRNA_P-wetherbeei_contig16283.1.3 vs. uniprot
Match: A0A2E6YXK4_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E6YXK4_9GAMM)

HSP 1 Score: 91.7 bits (226), Expect = 3.510e-20
Identity = 53/141 (37.59%), Postives = 82/141 (58.16%), Query Frame = 1
Query:    1 KVPILEIDGVVLPQSVAILRFAGREAGLYPVNDPVAAAQCDAVIDGLTDIQVRSKREIEQKMEVMESERLKAVLRKELNDTILPASLAQFQRLLLASGKGDWFVGDRMSIADIAVSTRLKWFRSGVLDGIEVGVCDAFPAL 423
            ++PILEIDG V+ QS+AI RF G+++G YPVN  + AA  D ++D +  +       +++     ++E+ KA LR  +    LP  L   +R +  +G   + +G+ M+IAD+A+   L WFRSG LDGI     D +P L
Sbjct:   52 QLPILEIDGKVIAQSLAIARFCGKKSGFYPVNSAINAALVDELLDSVAQVTELFSASLDES----DAEK-KAKLRYTIATHTLPMWLGFLERRVATNGGALYCIGEDMTIADLALWRLLGWFRSGKLDGIPTDCIDLYPRL 187          
BLAST of mRNA_P-wetherbeei_contig16283.1.3 vs. uniprot
Match: A0A8K1CB39_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CB39_PYTOL)

HSP 1 Score: 94.7 bits (234), Expect = 4.590e-20
Identity = 58/144 (40.28%), Postives = 91/144 (63.19%), Query Frame = 1
Query:    1 KVPILEIDGVVLPQSVAILRFAGREAGLYPVNDPVAAAQCDAVIDGLTDIQVRSKREIEQKMEVMESERLKAVLRKELNDTILPASLAQFQRLLLASGKGDWFVGDRMSIADIAVSTRLKWFRSGVLDGIEVGVCDAFPALVAL 432
            ++P+LE+DG V+ QS A+LR+AGR +GLYPVNDPVAA + D ++ G TD +++SK  +   +   + ++ KA LR+EL + ++P  L    R L    K   F  D + I ++ +++ + W +SGVLD I V VCD + A+  L
Sbjct:   52 QLPVLEVDGEVIAQSEALLRYAGRLSGLYPVNDPVAALKIDELL-GSTD-ELKSK--MIPSIHEQDPDKKKA-LREELANAVIPRFLGFVDRRLTLLKKHAVFQRDALFIHELLINSFVSWMKSGVLDHIPVTVCDGYTAVEEL 190          
BLAST of mRNA_P-wetherbeei_contig16283.1.3 vs. uniprot
Match: D8LK37_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK37_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 1.240e-19
Identity = 53/145 (36.55%), Postives = 80/145 (55.17%), Query Frame = 1
Query:    1 KVPILEIDGVVLPQSVAILRFAGREAGLYPVNDPVAAAQCDAVIDGLTDIQVRSKREIEQKMEVMESERLKAVLRKELNDTILPASLAQFQRLLLASGKGDWFVGDRMSIADIAVSTRLKWFRSGVLD-GIEVGVCDAFPALVAL 432
            ++P+LE+DG V+PQ+ AILR+ G+   LYP  DP+ AA  D+  D + D+    +    +K         K  L K+L + +LP  LA  ++ L  +G G +F GD++SI DIAV  RL W   G  D  +   + + FP L +L
Sbjct:   50 QMPVLEVDGAVIPQTFAILRYVGKMGDLYP-TDPIQAAFADSATDAVNDMHGHMRAIFFEK-----DADAKTQLLKDLVEKLLPPWLANLEKALKLAG-GKYFAGDKLSIGDIAVVARLNWLTDGTFDESVPSAILEEFPLLSSL 187          
BLAST of mRNA_P-wetherbeei_contig16283.1.3 vs. uniprot
Match: A0A381TIK7_9ZZZZ (Uncharacterized protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381TIK7_9ZZZZ)

HSP 1 Score: 90.1 bits (222), Expect = 1.560e-19
Identity = 50/144 (34.72%), Postives = 80/144 (55.56%), Query Frame = 1
Query:    1 KVPILEIDGVVLPQSVAILRFAGREAGLYPVNDPVAAAQCDAVIDGLTDIQVRSKREIEQKMEVMESERLKAVLRKELNDTILPASLAQFQRLLLASGKGDWFVGDRMSIADIAVSTRLKWFRSGVLDGIEVGVCDAFPALVAL 432
            ++P+LE+DG ++ Q+ AI RF G+ +G+YP ++   AA+ D +I+   DI         +K     +   K + R+ L    LP      + LL+ + + DWFVG+ M+IAD+A+   L W  SG+LDG+   V D +  LV L
Sbjct:   58 QLPVLEVDGKIVAQTGAIARFCGKLSGMYPSDNDFDAARVDQIIEAAQDINYIVSISGREK-----NPEKKLLARERLTKLHLPKWFQFLENLLIENKESDWFVGNSMTIADLAIWRLLGWLTSGLLDGVPTSVLDPYKNLVEL 196          
BLAST of mRNA_P-wetherbeei_contig16283.1.3 vs. uniprot
Match: A0A8K1CB83_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CB83_PYTOL)

HSP 1 Score: 92.4 bits (228), Expect = 2.950e-19
Identity = 51/144 (35.42%), Postives = 86/144 (59.72%), Query Frame = 1
Query:    1 KVPILEIDGVVLPQSVAILRFAGREAGLYPVNDPVAAAQCDAVIDGLTDIQVRSKREIEQKMEVMESERLKAVLRKELNDTILPASLAQFQRLLLASGKGDWFVGDRMSIADIAVSTRLKWFRSGVLDGIEVGVCDAFPALVAL 432
            ++P+LE+DG V+ QS A+LRFAGR  GLYPVNDPVAA + D ++  + ++  +      ++    + ++ KA LR+E+ +TI+P  L    R L    +   F  D + I ++ ++  ++W + GV+D +   VCD + A+ AL
Sbjct:   53 QLPVLEVDGEVIAQSEAMLRFAGRLTGLYPVNDPVAALKIDELLGSMDELSSKMSPSFREQ----DPDKKKA-LREEMANTIIPRYLGLIDRRLAQLKEYAVFKTDSLFIHELLINNFVRWMKMGVVDHVPTTVCDGYAAVDAL 191          
BLAST of mRNA_P-wetherbeei_contig16283.1.3 vs. uniprot
Match: A0A8K1FG94_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FG94_PYTOL)

HSP 1 Score: 92.4 bits (228), Expect = 2.950e-19
Identity = 51/144 (35.42%), Postives = 86/144 (59.72%), Query Frame = 1
Query:    1 KVPILEIDGVVLPQSVAILRFAGREAGLYPVNDPVAAAQCDAVIDGLTDIQVRSKREIEQKMEVMESERLKAVLRKELNDTILPASLAQFQRLLLASGKGDWFVGDRMSIADIAVSTRLKWFRSGVLDGIEVGVCDAFPALVAL 432
            ++P+LE+DG V+ QS A+LRFAGR  GLYPVNDPVAA + D ++  + ++  +      ++    + ++ KA LR+E+ +TI+P  L    R L    +   F  D + I ++ ++  ++W + GV+D +   VCD + A+ AL
Sbjct:   53 QLPVLEVDGEVIAQSEAMLRFAGRLTGLYPVNDPVAALKIDELLGSMDELSSKMSPSFREQ----DPDKKKA-LREEMANTIIPRYLGLIDRRLAQLKEYAVFKTDSLFIHELLINNFVRWMKMGVVDHVPTTVCDGYAAVDAL 191          
BLAST of mRNA_P-wetherbeei_contig16283.1.3 vs. uniprot
Match: A0A061SAH2_9CHLO (Prostaglandin-H2 D-isomerase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SAH2_9CHLO)

HSP 1 Score: 88.6 bits (218), Expect = 4.650e-19
Identity = 54/144 (37.50%), Postives = 80/144 (55.56%), Query Frame = 1
Query:    1 KVPILEIDGVVLPQSVAILRFAGREAGLYPVNDPVAAAQCDAVIDGLTDIQVRSKREIEQKMEVMESERLKAVLRKELNDTILPASLAQFQRLLLASGKGDWFVGDRMSIADIAVSTRLKWFRSGVLDGIEVGVCDAFPALVAL 432
             VP L I   V  QS AILR+AG+ AGLYP  DPV A   D ++D L D+ +  K  +++     + E+ K  +RK L +  LP  L  F + +  +G   + VGD ++IAD+ + T +    SG+LDGI   + + FP + AL
Sbjct:   49 SVPTLTIGDRVYAQSNAILRYAGKLAGLYP-TDPVEALAVDQIVDALEDMFLHVKPTVQE-----QDEKKKMEMRKVLAEETLPKWLGYFNKHIEENGSSGYIVGDSLTIADLKLYTLIGLLTSGMLDGIPKTIAEPFPKVTAL 186          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16283.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAZ7_9PHAE1.280e-2642.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHF0_ECTSI2.630e-2540.97Glutathione S-transferase n=1 Tax=Ectocarpus silic... [more]
A0A382CNQ0_9ZZZZ7.080e-2132.62Uncharacterized protein n=1 Tax=marine metagenome ... [more]
A0A2E6YXK4_9GAMM3.510e-2037.59Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A8K1CB39_PYTOL4.590e-2040.28Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D8LK37_ECTSI1.240e-1936.55Glutathione S-transferase n=1 Tax=Ectocarpus silic... [more]
A0A381TIK7_9ZZZZ1.560e-1934.72Uncharacterized protein n=1 Tax=marine metagenome ... [more]
A0A8K1CB83_PYTOL2.950e-1935.42Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A8K1FG94_PYTOL2.950e-1935.42Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A061SAH2_9CHLO4.650e-1937.50Prostaglandin-H2 D-isomerase n=1 Tax=Tetraselmis s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16283contigP-wetherbeei_contig16283:169..1329 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog38833.XP_003056913.1
PFAMsGST_C_3,GST_N
Model size432
Max annot lvl2759|Eukaryota
KEGG rclassRC00004,RC00069,RC00672,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944
KEGG koko:K00799,ko:K04097
KEGG TC1.A.12.2.2,1.A.12.3.2
KEGG ReactionR02266,R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905
KEGG Pathwayko00480,ko00590,ko00980,ko00982,ko00983,ko01100,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00590,map00980,map00982,map00983,map01100,map01524,map05200,map05204,map05225,map05418
Hectar predicted targeting categoryother localisation
GOsGO:0008150,GO:0010033,GO:0014070,GO:0042221,GO:0042493,GO:0045472,GO:0046677,GO:0050896,GO:0097327,GO:1901654,GO:1901700,GO:1904643
Exons3
Evalue9.6e-18
EggNOG OGsKOG1695@1|root,KOG1695@2759|Eukaryota
Ec32 ortholog descriptionGlutathione S-transferase
Ec32 orthologEc-18_001805.1
EC2.5.1.18,5.3.99.2
Descriptionglutathione transferase activity
Cds size432
COG categoryO
BRITEko00000,ko00001,ko01000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186081.9403684-CDS-P-wetherbeei_contig16283:168..3531683186081.9403684-CDS-P-wetherbeei_contig16283:168..353Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16283 169..353 +
1683186081.9624853-CDS-P-wetherbeei_contig16283:419..4471683186081.9624853-CDS-P-wetherbeei_contig16283:419..447Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16283 420..447 +
1683186081.9736738-CDS-P-wetherbeei_contig16283:1110..13291683186081.9736738-CDS-P-wetherbeei_contig16283:1110..1329Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16283 1111..1329 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16283.1.3prot_P-wetherbeei_contig16283.1.3Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16283 169..1329 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16283.1.3

>prot_P-wetherbeei_contig16283.1.3 ID=prot_P-wetherbeei_contig16283.1.3|Name=mRNA_P-wetherbeei_contig16283.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=144bp
KVPILEIDGVVLPQSVAILRFAGREAGLYPVNDPVAAAQCDAVIDGLTDI
QVRSKREIEQKMEVMESERLKAVLRKELNDTILPASLAQFQRLLLASGKG
DWFVGDRMSIADIAVSTRLKWFRSGVLDGIEVGVCDAFPALVAL
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mRNA from alignment at P-wetherbeei_contig16283:169..1329+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16283.1.3 ID=mRNA_P-wetherbeei_contig16283.1.3|Name=mRNA_P-wetherbeei_contig16283.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1161bp|location=Sequence derived from alignment at P-wetherbeei_contig16283:169..1329+ (Phaeothamnion wetherbeei SAG_119_79)
AAGGTGCCCATCCTGGAGATCGACGGCGTGGTGCTGCCTCAGAGCGTCGC CATCCTCCGCTTCGCCGGGCGCGAAGCCGGCTTGTACCCCGTCAACGACC CCGTCGCCGCCGCGCAGTGCGACGCCGTTATCGATGGCCTCACCGACATT CAGGTAAGAAGCAAAAGGGAAATTGAACAGAAGATGTGCTCGGAGTCCAA TCCATTTATTAGACACTAGGTATGCTCCTTTTTCTGGACCGCATCAAAAA GGGAAGTTATGGAATCGGAACGTCTGAAGGTTGGAAAAGAAGAGCGAGAA ATCGTGTTTAGCCTGAGCTGCATGTCAGCTCTCATCTGTTCTAAGGACGA AAGCGGGGAAGCCACCTTTCTATTAGCGGAACGAAGCTGAGGCCCGACGA TGGTTGACGACTCCACCTGCCGCCGCTTCCGCCGCTTATGCGTGCCGAGC CCTCCCACTGCTGCACTGCCGCCGCCGCTGTTATGTTGCTGACCGTCGAA ATTGCCGTCGCCGCCCCCGCCGCTATTACCGCCGGTGCCCGCTGCCGCCG CTGTCACTGCCGGTGCCTGCCTCCGCCGTCATCATCGTCGGTGCCTGCCT CGGCCTGTTGTCGTTTGTCGTGGCCTGCAGGCCAAGTTACGGCCGAGCCT GTACGAGCAGGACCCCGAGAAGAAGGTGGGATTAACGTGCCTGGTCGAAA CGCCGCGCGTCGCCAGCGGTGCTGTGCCTTTGTTGGTTTCCTTAATCATG GACTGCTCAATTCAAACGGCATGCATTTTCCAAGCTTTGAGTGTTGGAAG GAGCTGTTTATGCGCTCAAAGTTGTTTCCCACACTGGAGGAGAGTGCTTC TTTTCCATATCAAAGCTGTAAACAAACCGTTCTTTAACGCCTGATCGCAA TCGCCCGAAATGCTTCTTCAAACCGACGTCCAACCCGTCCAGGCCGTCCT GCGCAAGGAGCTGAACGACACGATCCTGCCGGCGTCCCTCGCCCAGTTCC AGCGGCTGCTGCTGGCGAGCGGCAAGGGCGACTGGTTCGTCGGCGACCGG ATGAGCATCGCCGACATTGCCGTCTCGACCCGCCTCAAGTGGTTCCGCAG CGGCGTCCTGGACGGCATCGAGGTCGGCGTGTGCGACGCCTTCCCGGCGC TTGTCGCGCTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16283:169..1329+

>mRNA_P-wetherbeei_contig16283.1.3 ID=mRNA_P-wetherbeei_contig16283.1.3|Name=mRNA_P-wetherbeei_contig16283.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=432bp|location=Sequence derived from alignment at P-wetherbeei_contig16283:169..1329+ (Phaeothamnion wetherbeei SAG_119_79)
AAGGTGCCCATCCTGGAGATCGACGGCGTGGTGCTGCCTCAGAGCGTCGC
CATCCTCCGCTTCGCCGGGCGCGAAGCCGGCTTGTACCCCGTCAACGACC
CCGTCGCCGCCGCGCAGTGCGACGCCGTTATCGATGGCCTCACCGACATT
CAGGTAAGAAGCAAAAGGGAAATTGAACAGAAGATGGAAGTTATGGAATC
GGAACGTCTGAAGGCCGTCCTGCGCAAGGAGCTGAACGACACGATCCTGC
CGGCGTCCCTCGCCCAGTTCCAGCGGCTGCTGCTGGCGAGCGGCAAGGGC
GACTGGTTCGTCGGCGACCGGATGAGCATCGCCGACATTGCCGTCTCGAC
CCGCCTCAAGTGGTTCCGCAGCGGCGTCCTGGACGGCATCGAGGTCGGCG
TGTGCGACGCCTTCCCGGCGCTTGTCGCGCTC
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