mRNA_P-wetherbeei_contig1628.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1628.2.1 vs. uniprot
Match: A0A7S2Y1A5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1A5_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.030e-19 Identity = 101/304 (33.22%), Postives = 137/304 (45.07%), Query Frame = 3
Query: 777 AIWHWVDAARRRMATERGSGAGYLPLLRLCNGLLRRFSRERDAAACGRVLVFLTEIMPLTERSALNVQGRTNTDNKTPIATKEEFDAQMGGFSTTAAAADDLEMTDAATVPXXXXXXXXXXXXXXXXXXXKGGDAEVEEAAGLTLVDFDCYMTIWGLQKALQDPLGLVSSPEAFAEIC----ARVDRVLAIFEAHKLSAHDLLVAAAVGSSAGVXXXXXXXXXXXXXXXXXXXIDVDVAAVSSGGGDDSNGGDXXXDNGTEXXGGDDVNAGGDKYLTGPRLLPYQLRDPAFRLHVLGQVLILQQ 1676
A+W ++ + + G L LLR+CN LLR+ S++ + CGRVL+FL PL+ERSA+NV G+ NT NKT F+ T AA ++ XXXXXXXXXXXXXX + G E + +D+ Y WG+Q+ DP ++ P + +C A + VLA FEA+ + DL A + + VAA + G + GG+ D G KYLT RLL QL DP RLHVL Q L+L Q
Sbjct: 12 AVWGLMERLAPELTRPQLFARGKLVLLRICNSLLRKLSKQCEPELCGRVLLFLAAAYPLSERSAVNVTGKANTQNKTA------FEXXXXXXETMAALKEEEXXXXXXXXXXXXXXXXXXXXXXXNAESKEEGKEEFQ-------LDYPFYRAFWGVQEFFSDPSKALTPPGSPRSVCPQLVADMGVVLAAFEANAFRSADLKAARQRWNISMGRAAEKTAAKGAKVKAEGSGASSTVAAAAVAGVGEVEGGEGWVDWGC-------------KYLTNSRLLALQLWDPQLRLHVLSQFLVLAQ 289
BLAST of mRNA_P-wetherbeei_contig1628.2.1 vs. uniprot
Match: A0A7S3MH41_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MH41_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.930e-17 Identity = 67/226 (29.65%), Postives = 102/226 (45.13%), Query Frame = 3
Query: 726 YAILEDACDRLPKAFCVAIWHWVDAARRRMATERGSGAGYLPLLRLCNGLLRRFSRERDAAACGRVLVFLTEIMPLTERSALNVQGRTNTDNKTPIATKEEFDAQMGGFSTTAAAADD--LEMTDAATVPXXXXXXXXXXXXXXXXXXXKGGDAEVEEAAGLTLVDFDCYMTIWGLQKALQDPLGLVSSPEAFAEICARVDRVLAIFEAHKLSAHDLLVAAAVGSS 1397
++++ED + A+W +++ + G L +LR CN LLR+ S+ + CGRV++FL I PL+E+SALN+ GR NT+N T KEE+ A G FS ++ A + E D V G D EA + ++ Y W LQ + +V + + + RVLA+FEAH S +L A V +S
Sbjct: 98 FSMIEDIMESQTIEKAEALWQIIESLVEVITQPDIFPKGKLTILRTCNSLLRKLSKSCNTEFCGRVMLFLAAIYPLSEKSALNLPGRMNTNNVTYFENKEEYLANKGIFSDSSNAVSNGGNEGEDGMEV-----------------VVLDGAD----EAGSSDQIGYEMYRAFWNLQSFFASEMKVVDDLSVWRDFSSHCRRVLALFEAHDFSEEELQQAHGVLNS 302
BLAST of mRNA_P-wetherbeei_contig1628.2.1 vs. uniprot
Match: R4XAS9_TAPDE (Uncharacterized protein n=1 Tax=Taphrina deformans (strain PYCC 5710 / ATCC 11124 / CBS 356.35 / IMI 108563 / JCM 9778 / NBRC 8474) TaxID=1097556 RepID=R4XAS9_TAPDE) HSP 1 Score: 96.7 bits (239), Expect = 2.500e-17 Identity = 64/209 (30.62%), Postives = 97/209 (46.41%), Query Frame = 3
Query: 720 LQYAILEDACDRLPKAFCVAIWHWVDAARRRMATERGSGAGYLPLLRLCNGLLRRFSRERDAAACGRVLVFLTEIMPLTERSALNVQGRTNTDNKTPIATKEEFDAQMGGFSTTAAAADDLEMTDAATVPXXXXXXXXXXXXXXXXXXXKGGDAEVEEAAGLTLVDFDCYMTIWGLQKALQDPLGLVSSPEAFAEICARVDRVLAIFEA 1346
L ++E+A D L + C ++ +++ R RM G G LLRLCN LLRR S+ +D CGR+L+FL+ + PL+ERSA+N++G N DN T ++ E +Q+ D EM A + + +A G + Y T W LQ +P ++S+P A + +D VL FEA
Sbjct: 82 LPLGLMEEALDVLTISKCDQLFSFLETHRHRMTARMGKGQ---TLLRLCNELLRRLSKTKDTVFCGRILIFLSLVFPLSERSAVNLRGEYNLDNATIFESEPEEPSQLRAIDA------DAEMASAES-------------------------SNNNQALG-GIAPESIYTTFWSLQAYFNNPAHIISAPLILARFRSALDTVLQAFEA 255
BLAST of mRNA_P-wetherbeei_contig1628.2.1 vs. uniprot
Match: A0A1V9ZSV5_9STRA (THO complex subunit n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZSV5_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 2.000e-14 Identity = 59/220 (26.82%), Postives = 92/220 (41.82%), Query Frame = 3
Query: 726 YAILEDACDRLPKAFCVAIWHWVDAARRRMATERGSGAGY-----LPLLRLCNGLLRRFSRERDAAACGRVLVFLTEIMPLTERSALNVQGRTNTDNKTPIATKEEFDAQMGGFSTTAAAADDLEMTDAATVPXXXXXXXXXXXXXXXXXXXKGGDAEVEEAAGLTLVDFDCYMTIWGLQKALQDPLGLVSSPEAFAEICARVDRVLAIFEAHKLSAHDL 1370
Y ILED D C +W +++ R + AG L LLR+CN LLRR S+ + CGR+L+FL L+ERSA+N+ GR N N T +++EF M +A +EEA+ D+ Y W +Q+ L++P + + + + +D+VL FE++ S D+
Sbjct: 104 YKILEDLMDCQTIVVCEKLWGLLESRRNSLTNSDFIQAGKTNKASLSLLRMCNALLRRLSKTHNTVFCGRILMFLAFTFSLSERSAVNLNGRYNLSNVTTFQSQDEFKISME-------------------------------------------NASLEEASS---TDYSLYKVFWDIQRYLRNPNAAIETDSEWNNLFKELDQVLTAFESNPFSPEDI 277
BLAST of mRNA_P-wetherbeei_contig1628.2.1 vs. uniprot
Match: A0A2P6V5B9_9CHLO (THO complex subunit 1 isoform X1 isoform A n=2 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V5B9_9CHLO) HSP 1 Score: 85.9 bits (211), Expect = 7.540e-14 Identity = 64/223 (28.70%), Postives = 97/223 (43.50%), Query Frame = 3
Query: 732 ILEDACDRLPKAFCVAIWHWVDAARRRMATERGSGAGYLPLLRLCNGLLRRFSRERDAAACGRVLVFLTEIMPLTERSALNVQGRTNTDNKTPIATKEEFDAQMGGFSTTAAAADDLEMTDAATVPXXXXXXXXXXXXXXXXXXXKGGDAEVEEAAGLTLVDFDCYMTIWGLQKALQDPLGLVSSPEAFAEICARVDRVLAIFEAHKLSAHDLLVAAAVGSSA 1400
+LE+ + A C ++ ++D+ GA L LLR CN LL+R S+ +A CGRVL+FL +++PLTERS +N+ G NTDN TP+ E+ + A D+E + VD Y T WGLQ +P + P + E+ + RVL F+A K++ + AA G++A
Sbjct: 136 LLEEISEGASNADCEGLYAYLDSRTEVFKAPPLQGASKLTLLRTCNALLKRLSKSANALLCGRVLLFLAKLLPLTERSGVNLGGAFNTDNVTPVE----------------------EVAEGAV------------------------DSEGQP------VDVAFYRTFWGLQSYFSNPPAALQ-PGKWGEVSRDIRRVLEKFQAEKVTVGE---GAAAGAAA 302
BLAST of mRNA_P-wetherbeei_contig1628.2.1 vs. uniprot
Match: A0A8J2X166_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X166_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 7.790e-14 Identity = 62/192 (32.29%), Postives = 88/192 (45.83%), Query Frame = 3
Query: 699 ESNPYFCLQYAILEDACDRLPKAFCVAIWHWVDAARRRMATERGS--GAGYLPLLRLCNGLLRRFSRERDAAACGRVLVFLTEIMPLTERSALNVQGRTNTDNKTPIATKEEFDAQMGGFSTTAAAADDLEMTDAATVPXXXXXXXXXXXXXXXXXXXKGGDAEVEEAAGLTLVDFDCYMTIWGLQKALQDP 1268
+ P + + +LED D P W V++ + + TE + AG LLRLCN LL+R SR R A CGR+L+F+ PL+E+SALN++G +TDN T + ++FDAQ A DD + DA GD +E D+D Y W +QK L +P
Sbjct: 144 DRGPVLNVAHKLLEDCIDAAPSTNADGWWDLVESHKGAL-TENPAIFKAGKFILLRLCNSLLKRLSRTRQATLCGRILMFMAAAWPLSEKSALNMKGLCHTDNVTEFESADQFDAQN--------ADDDFD--DA-------------------------GDGAPKE-------DYDTYSGFWSVQKYLSNP 292
BLAST of mRNA_P-wetherbeei_contig1628.2.1 vs. uniprot
Match: H3GQT3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GQT3_PHYRM) HSP 1 Score: 83.2 bits (204), Expect = 5.160e-13 Identity = 88/322 (27.33%), Postives = 136/322 (42.24%), Query Frame = 3
Query: 726 YAILEDACDRLPKAFCVAIWHWVDAARRRMAT-----ERG-SGAGYLPLLRLCNGLLRRFSRERDAAACGRVLVFLTEIMPLTERSALNVQGRTNTDNKTPIATKEEFDAQMGGFSTTAAAADDLEMTDAATVPXXXXXXXXXXXXXXXXXXXKGGDAEVEEAAGLTLVDFDCYMTIWGLQKALQDPLGLVSSPEAFAEICARVDRVLAIFEAHKLSAHDLLVAA-AVGSSAGVXXXXXXXXXXXXXXXXXXXIDVDVAAVSSGGGDDSNGGDXXXDNGTEXXGGDDVNAGGDKYLTGPRLLPYQLRDPAFRLHVLGQVLIL 1670
Y +LED + + C +W +++ + ++ T E+G + L LLR+CN LLRR S+ ++ CG++LVFL+ L+ERSA+N+ G++N N T ++ F XXXXXXX G + + + +A + +D++ Y T W LQ ++ S E + + ++ VLA FE + S DL + +GSS G D+ + S D D + G + KYLT RL QLRDP R +L Q LIL
Sbjct: 103 YKVLEDLMEGQTISTCEKVWDLLESRKDKLTTPEFIAEKGRTTKASLCLLRMCNALLRRLSKTHNSVFCGKILVFLSFTFALSERSAVNLTGKSNVTNVTVFEEQDAFXXXXXXXX------------------------------XXXXXXXPGLEIDSDPSADVGPIDYNLYRTFWDLQSFFREHQMATQSAENWEKFFTELNVVLAAFEGNAFSPDDLERSRDLLGSSGGAIHSA----------------DITIHEPES---------DTSKDASEQ---GSQEHFFQPKYLTNSRLFRLQLRDPILRECMLTQFLIL 366
BLAST of mRNA_P-wetherbeei_contig1628.2.1 vs. uniprot
Match: A0A7S0E2F5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E2F5_9CRYP) HSP 1 Score: 75.9 bits (185), Expect = 1.170e-12 Identity = 52/169 (30.77%), Postives = 75/169 (44.38%), Query Frame = 3
Query: 852 LLRLCNGLLRRFSRERDAAACGRVLVFLTEIMPLTERSALNVQGRTNTDNKTPIATKEEFDAQMGGFSTTAAAADDLEMTDAATVPXXXXXXXXXXXXXXXXXXXKGGDAEVEEAAGLTLVDFDCYMTIWGLQKALQDPLGLVSSPEAFAEICARVDRVLAIFEAHKLS 1358
LLR CN L++R S+ D CGRVL+FL ++PL+E+S +N++G N N T EF + T +D + + K D +++ G V F Y T WGLQK L DP L + PE + + VL F ++ LS
Sbjct: 3 LLRCCNTLMQRLSKTCDLLLCGRVLMFLAHVLPLSEKSGVNLKGEFNKANVT------EFQENLDDIDYTKMEDEDKDESKI---------------------YLKSTDEKLD---GQMEVSFSLYKTFWGLQKYLHDPSALFNGPELVDSMIQGMTLVLDCFSSYSLS 141
BLAST of mRNA_P-wetherbeei_contig1628.2.1 vs. uniprot
Match: A0A7S1XS13_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XS13_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 2.040e-12 Identity = 46/125 (36.80%), Postives = 63/125 (50.40%), Query Frame = 3
Query: 675 VSAAAPFSESNPYFCLQYAILEDACDRLPKAFCVAIWHWVDAARRRMATERGSGAGYLPLLRLCNGLLRRFSRERDAAACGRVLVFLTEIMPLTERSALNVQGRTNTDNKTPIATKEEFDAQMGG 1049
V+AA P + + +LED + A W + + G +PLLRLCN LL+R SR D A GR+L+FL + PL+ERSALN+ G+ N N+T +E F A GG
Sbjct: 111 VNAADADVAPPPAVIMPFLLLEDLLEGQTIAGAERAWAHAETRMEELTKPWLFARGKIPLLRLCNNLLKRLSRAHDTAFSGRILLFLAKAYPLSERSALNIPGKLNELNRTLYDGEEAFSAGAGG 235
BLAST of mRNA_P-wetherbeei_contig1628.2.1 vs. uniprot
Match: C1EGJ9_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EGJ9_MICCC) HSP 1 Score: 80.9 bits (198), Expect = 2.160e-12 Identity = 63/207 (30.43%), Postives = 87/207 (42.03%), Query Frame = 3
Query: 735 LEDACDRLPKAFCVAIWHWVDAARRRMATERGSGAGYLPLLRLCNGLLRRFSRERDAAACGRVLVFLTEIMPLTERSALNVQGRTNTDNKTPIATKEEFDAQMGGFSTTAAAADDLEMTDAATVPXXXXXXXXXXXXXXXXXXXKGGDAEVEEAAGLTLVDFDCYMTIWGLQKALQDPLGLVSSPEAFAEICARVDRVLAIFEAHKL 1355
LE + A C ++ WV+A R R++ + G L +LR CN L RR S+ D GRVL+ L+ + PL+ERSALN+ G N N T + +E DA D E TDA +A G+ +VD Y T W LQK +P + + C + VL FE H+L
Sbjct: 26 LEQLVETCTIADCEDVFTWVEARRGRLSADALWRRGKLVMLRTCNELQRRLSKTADTVLRGRVLLLLSSLYPLSERSALNLGGNYNAGNTTEL---DELDA------------DTAEATDANA-----------------------------KAEGV-VVDRAFYETFWSLQKFFSNPPAALEPAAGWKTFCVSLRLVLDNFETHRL 187 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1628.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1628.2.1 >prot_P-wetherbeei_contig1628.2.1 ID=prot_P-wetherbeei_contig1628.2.1|Name=mRNA_P-wetherbeei_contig1628.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=550bp MGVKRRSKAARTAEVEDRDNEEQATNNTAPEAKDGASSEGVMGTWDERVSback to top mRNA from alignment at P-wetherbeei_contig1628:1223..3542+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1628.2.1 ID=mRNA_P-wetherbeei_contig1628.2.1|Name=mRNA_P-wetherbeei_contig1628.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2320bp|location=Sequence derived from alignment at P-wetherbeei_contig1628:1223..3542+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1628:1223..3542+ >mRNA_P-wetherbeei_contig1628.2.1 ID=mRNA_P-wetherbeei_contig1628.2.1|Name=mRNA_P-wetherbeei_contig1628.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1650bp|location=Sequence derived from alignment at P-wetherbeei_contig1628:1223..3542+ (Phaeothamnion wetherbeei SAG_119_79)back to top |