mRNA_P-wetherbeei_contig16225.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16225.1.2
Unique NamemRNA_P-wetherbeei_contig16225.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16225.1.2 vs. uniprot
Match: D7FIM0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIM0_ECTSI)

HSP 1 Score: 213 bits (541), Expect = 5.010e-60
Identity = 114/200 (57.00%), Postives = 146/200 (73.00%), Query Frame = 1
Query:    7 PGYRRVRPCSYCHVPYHHAAAPFSNMRLVPCGICRRKWVAETVLATVEPPPGLKTRGGGVLVEARVVRVQRRTPSGEADAMRISDHLPFVEYELQRQLMLKLRLLGMNAAWAVHTQVQIGAALVIGTIAATACYVESLPPPAALQISR--------GVEVRDAGDRRLVGLHKAIEQAAAINRQRLAALAPRRPRRTYRR 582
            P +R VRPCSY HVPYHH  APF++MRLVPCG+C RKWVAETVL+TVE P  L +RG G LVEARV RV RR  + E +A+R+S+ LPF+EYELQRQLMLKL+ LG+NAA+++ + +Q+G  L++G+I+ATA YVESLP P  L ++R        G    DA  RR++ L   +E+  A+NRQRL ALAP+R R   RR
Sbjct:   86 PPFRTVRPCSYFHVPYHHRKAPFADMRLVPCGMCGRKWVAETVLSTVEAPENLISRGEGCLVEARVCRVHRRQGTSELEAIRVSEALPFMEYELQRQLMLKLKCLGVNAAFSLRSDIQLGPRLMVGSISATAVYVESLPTPPQLVVARPPRSLHQDGGXXXDAR-RRVLALASRVERIGAVNRQRLQALAPKRRRLRGRR 284          
BLAST of mRNA_P-wetherbeei_contig16225.1.2 vs. uniprot
Match: A0A7S4VGH9_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VGH9_9STRA)

HSP 1 Score: 201 bits (512), Expect = 3.800e-56
Identity = 101/189 (53.44%), Postives = 135/189 (71.43%), Query Frame = 1
Query:   16 RRVRPCSYCHVPYHHAAAPFSNMRLVPCGICRRKWVAETVLATVEPPPGLKTRGGGVLVEARVVRVQRRTPSGEADAMRISDHLPFVEYELQRQLMLKLRLLGMNAAWAVHTQVQIGAALVIGTIAATACYVESLPPPAALQISRGVEVRDAGDRRLVGLHKAIEQAAAINRQRLAALAPRRPRRTYRR 582
            R  RPCSYCHVPYHH  APF+NM+LVPC +C +KWV E +LATVEPP  L  RG GV ++ARV+R  R   + E DA+ +S+ LPF+EYEL RQLM+KL++LG NAA+++ ++V +G+ L+IGT  ATA Y +++PPP  L+ISR + V+D  D +LV L   IE+ +  NR RLA  A RR  R  R+
Sbjct:  354 RPARPCSYCHVPYHHRLAPFTNMKLVPCLLCGKKWVPEVILATVEPPARLPVRGQGVFIQARVMR-SRPKATNETDALAVSESLPFLEYELARQLMVKLKILGRNAAFSLKSEVDVGSQLIIGTATATALYCDAMPPPRVLEISRTIAVQDEEDHQLVKLQHQIEKISERNRHRLALSAQRRGERLRRK 541          
BLAST of mRNA_P-wetherbeei_contig16225.1.2 vs. uniprot
Match: A0A7S4AET6_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AET6_9STRA)

HSP 1 Score: 199 bits (507), Expect = 9.080e-56
Identity = 96/179 (53.63%), Postives = 130/179 (72.63%), Query Frame = 1
Query:   16 RRVRPCSYCHVPYHHAAAPFSNMRLVPCGICRRKWVAETVLATVEPPPGLKTRGGGVLVEARVVRVQRRTPSGEADAMRISDHLPFVEYELQRQLMLKLRLLGMNAAWAVHTQVQIGAALVIGTIAATACYVESLPPPAALQISRGVEVRDAGDRRLVGLHKAIEQAAAINRQRLAALA 552
            R  +PCSYCHVPYHH  APF+NM+LVPC +C +KWV E VLAT EPP  L  RG GV ++ARV R ++   + E+DA+ +S+ LPF+EYEL RQLMLKL++LG NAA+++  +V +G +L+I T+ ATA Y  ++P P  L+ISR + V+D  D +LV L + IEQ +A NRQRL+  A
Sbjct:   59 RDAKPCSYCHVPYHHRVAPFTNMKLVPCMLCGKKWVPEVVLATCEPPARLPIRGPGVFIQARVCRTRQPERNSESDALAVSEALPFLEYELARQLMLKLKVLGRNAAFSLKNEVDVGRSLIISTVTATAVYCTAMPSPRILEISRTIAVQDEEDEKLVKLQRQIEQISAKNRQRLSTAA 237          
BLAST of mRNA_P-wetherbeei_contig16225.1.2 vs. uniprot
Match: A0A448YU60_9STRA (C2 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YU60_9STRA)

HSP 1 Score: 199 bits (505), Expect = 3.450e-55
Identity = 98/189 (51.85%), Postives = 134/189 (70.90%), Query Frame = 1
Query:   16 RRVRPCSYCHVPYHHAAAPFSNMRLVPCGICRRKWVAETVLATVEPPPGLKTRGGGVLVEARVVRVQRRTPSGEADAMRISDHLPFVEYELQRQLMLKLRLLGMNAAWAVHTQVQIGAALVIGTIAATACYVESLPPPAALQISRGVEVRDAGDRRLVGLHKAIEQAAAINRQRLAALAPRRPRRTYRR 582
            R  +PCSYCHVPYHH  APF+NM+LVPC +C +KWV E VLAT EPP  L  RG GV ++ARV R +    + E+DA+ +S+ LPF+EYEL RQLMLKL++LG NAA+++  +V +G +L+I T+ ATA Y  ++P P  L+ISR + V+D  D++LV L + IE+ +A NRQRL+  A R   R  +R
Sbjct:  617 RDAKPCSYCHVPYHHRLAPFTNMKLVPCMLCGKKWVPEVVLATCEPPSRLPIRGPGVFIQARVCRSRPAERNSESDALAVSEALPFLEYELARQLMLKLKVLGRNAAFSLKNEVDVGKSLIISTVTATAVYCTAMPSPRILEISRTIAVQDEEDQKLVNLQRQIEKISAKNRQRLSTAAQRHLERVRKR 805          
BLAST of mRNA_P-wetherbeei_contig16225.1.2 vs. uniprot
Match: A0A7S4N180_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N180_9STRA)

HSP 1 Score: 196 bits (499), Expect = 2.140e-54
Identity = 102/192 (53.12%), Postives = 135/192 (70.31%), Query Frame = 1
Query:   16 RRVRPCSYCHVPYHHAAAPFSNMRLVPCGICRRKWVAETVLATVEPPPGLKTRGGGVLVEARVVRVQRRTPSGEADAMRISDHLPFVEYELQRQLMLKLRLLGMNAAWAVHTQVQIGAALVIGTIAATACYVESLPPPAALQISRGVEVRDAGDRRLVGLHKAIEQAAAINRQRLAALAPR---RPRRTYRR 582
            R  RPCSYCHVPYHH  APF+NM+LVPC +C +KWV E +LATVEPP  L  RG GV ++ARV R  R   +GE DA+ +S+ LPF+EYEL RQLMLKL++LG NAA+++ ++V +G+ L+I T  ATA Y +++P P AL+ISR + V+D  D +LV L + IE  ++ NR  LA  A R   + RR Y R
Sbjct:  399 RPARPCSYCHVPYHHRLAPFANMKLVPCLLCGKKWVPEVILATVEPPERLPVRGSGVFIQARVCR-SRPKSTGETDALAVSEALPFLEYELARQLMLKLKVLGRNAAFSLKSEVDVGSQLIIATATATALYCDAMPAPRALEISRTIAVQDEEDHQLVRLQRQIENISSKNRLWLAMAAQREAAKKRREYAR 589          
BLAST of mRNA_P-wetherbeei_contig16225.1.2 vs. uniprot
Match: A0A1E7F3B6_9STRA (C2 domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F3B6_9STRA)

HSP 1 Score: 196 bits (499), Expect = 2.210e-54
Identity = 98/190 (51.58%), Postives = 133/190 (70.00%), Query Frame = 1
Query:   16 RRVRPCSYCHVPYHHAAAPFSNMRLVPCGICRRKWVAETVLATVEPPPGLKTRGGGVLVEARVVRVQRRTPSGEADAMRISDHLPFVEYELQRQLMLKLRLLGMNAAWAVHTQVQIGAALVIGTIAATACYVESLPPPAALQISRGVEVRDAGDRRLVGLHKAIEQAAAINRQRLAALAPRRPRRTYRRR 585
            R  +PCS+CHVPYHH  APF+NM+LVPC +C +KWV E +LAT EPP  L  RG GV ++ARV R +    + E+DA+ +S+ LPF+EYEL RQLMLKL++LG NAA+++  +V +G +L+I T+ ATA Y  ++P P  L+ISR + V+D  D +LV L K IE+ +A NRQRL   A R   R  +RR
Sbjct:  597 RDAKPCSFCHVPYHHRLAPFTNMKLVPCMLCGKKWVPEVLLATCEPPARLPIRGPGVFIQARVCRSRPPEKNSESDALAVSEALPFLEYELARQLMLKLKVLGRNAAFSLKNEVDVGRSLIISTVTATAVYCTAMPSPRILEISRTIAVQDEEDHQLVKLQKQIEKISAKNRQRLLTAAQRHVERVRKRR 786          
BLAST of mRNA_P-wetherbeei_contig16225.1.2 vs. uniprot
Match: B8BXV2_THAPS (C2 domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXV2_THAPS)

HSP 1 Score: 194 bits (494), Expect = 6.130e-54
Identity = 93/172 (54.07%), Postives = 129/172 (75.00%), Query Frame = 1
Query:   16 RRVRPCSYCHVPYHHAAAPFSNMRLVPCGICRRKWVAETVLATVEPPPGLKTRGGGVLVEARVVRVQRRTPSGEADAMRISDHLPFVEYELQRQLMLKLRLLGMNAAWAVHTQVQIGAALVIGTIAATACYVESLPPPAALQISRGVEVRDAGDRRLVGLHKAIEQAAAINR 531
            R  RPCSYCHVPYHH  APF+NM+LVPC +C +KWV E +LATVEPP  L  RG GV V+ARV R + R  +GE+DA+ +S+ LPF+E++L RQLMLKL++LG NAA+++ +++ +G+ L++ T  ATA Y E++PPP  L+ISR + V+D  D++LV L + IE  +A NR
Sbjct:  600 RLARPCSYCHVPYHHRLAPFTNMKLVPCLLCGKKWVPEIILATVEPPSRLPIRGTGVFVQARVCRTRPRA-TGESDALAVSEALPFLEFDLARQLMLKLKILGRNAAFSLRSEIDVGSQLIVATATATAVYCEAMPPPRVLEISRTIAVQDEEDQQLVKLQRLIETFSARNR 770          
BLAST of mRNA_P-wetherbeei_contig16225.1.2 vs. uniprot
Match: A0A7S2RRS9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RRS9_9STRA)

HSP 1 Score: 175 bits (443), Expect = 6.950e-52
Identity = 82/144 (56.94%), Postives = 108/144 (75.00%), Query Frame = 1
Query:   16 RRVRPCSYCHVPYHHAAAPFSNMRLVPCGICRRKWVAETVLATVEPPPGLKTRGGGVLVEARVVRVQRRTPSGEADAMRISDHLPFVEYELQRQLMLKLRLLGMNAAWAVHTQVQIGAALVIGTIAATACYVESLPPPAALQIS 447
            R  RPCSYCHVPYHH  APFSNM+LVPC +C +KWV E +LAT+EPP  L  RG G  ++ARV R  R   +GE DA+ +S+ LPF+EYEL RQLMLKL++LG NAA+++ ++V +G+ L+I T  ATA + +++PPP  LQIS
Sbjct:   61 RSARPCSYCHVPYHHRLAPFSNMKLVPCLLCGKKWVPEVILATIEPPARLPVRGPGAFIQARVCR-SRPKSTGETDALAVSEALPFLEYELARQLMLKLKVLGRNAAFSLKSEVDVGSQLIIATATATALFCDAMPPPRVLQIS 203          
BLAST of mRNA_P-wetherbeei_contig16225.1.2 vs. uniprot
Match: F0WE18_9STRA (Uncharacterized protein AlNc14C71G4880 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WE18_9STRA)

HSP 1 Score: 184 bits (468), Expect = 2.050e-50
Identity = 91/171 (53.22%), Postives = 121/171 (70.76%), Query Frame = 1
Query:   28 PCSYCHVPYHHAAAPFSNMRLVPCGICRRKWVAETVLATVEPPPGLKTRGGGVLVEARVVRVQRRTPSGEADAMRISDHLPFVEYELQRQLMLKLRLLGMNAAWAVHTQVQIGAALVIGTIAATACYVESLPPPAALQISRGVEVRDAGDRRLVGLHKAIEQAAAINRQRL 540
            PC  CH+PY  + APFSNMR+V CGICR KWV E +LA++EPP GL   G G  V+ARV R QRR  +G+A+A  +SD LPFVEYEL RQL +K+++LGMNA +   +Q+QIG AL++G I  T  Y+ +LP P  L+I R +E++D  DRRLV L   IE  +A N+++L
Sbjct:  429 PCLSCHIPYSRSLAPFSNMRMVRCGICRNKWVPEMLLASIEPPTGLAIVGSGCFVQARVCR-QRRKGTGDANATIVSDALPFVEYELYRQLTVKMKVLGMNAMFGFDSQIQIGGALIVGVITGTGFYLPALPSPPTLRIERNIEIKDDEDRRLVSLQNEIEALSASNKEKL 598          
BLAST of mRNA_P-wetherbeei_contig16225.1.2 vs. uniprot
Match: K0T113_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T113_THAOC)

HSP 1 Score: 185 bits (469), Expect = 2.300e-50
Identity = 90/172 (52.33%), Postives = 120/172 (69.77%), Query Frame = 1
Query:   16 RRVRPCSYCHVPYHHAAAPFSNMRLVPCGICRRKWVAETVLATVEPPPGLKTRGGGVLVEARVVRVQRRTPSGEADAMRISDHLPFVEYELQRQLMLKLRLLGMNAAWAVHTQVQIGAALVIGTIAATACYVESLPPPAALQISRGVEVRDAGDRRLVGLHKAIEQAAAINR 531
            R  +PCSYCHVPYHH  APF NM+LVPC +C +KWV ET+LAT EPP  L  RG G  ++ARV R + +  SGE DA+ +S+ LPF+E++L RQLMLKL++LG NAA+ + ++V +G  L+I T  ATA Y E++PPP  L+I R +   D  D +LV L + IE  +A NR
Sbjct:  368 RLAKPCSYCHVPYHHRQAPFQNMKLVPCQMCGKKWVPETILATCEPPSRLPIRGHGTFIQARVCRTRPKA-SGENDALAVSEALPFLEFDLARQLMLKLKILGRNAAFGLKSEVDVGGQLIIATATATAVYCEAMPPPRVLEIDRTIACLDEEDDQLVRLQRLIETISARNR 538          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16225.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIM0_ECTSI5.010e-6057.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S4VGH9_9STRA3.800e-5653.44Hypothetical protein n=4 Tax=Ditylum brightwellii ... [more]
A0A7S4AET6_9STRA9.080e-5653.63Hypothetical protein n=2 Tax=Pseudo-nitzschia aust... [more]
A0A448YU60_9STRA3.450e-5551.85C2 domain-containing protein n=1 Tax=Pseudo-nitzsc... [more]
A0A7S4N180_9STRA2.140e-5453.13Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A1E7F3B6_9STRA2.210e-5451.58C2 domain-containing protein n=1 Tax=Fragilariopsi... [more]
B8BXV2_THAPS6.130e-5454.07C2 domain-containing protein (Fragment) n=1 Tax=Th... [more]
A0A7S2RRS9_9STRA6.950e-5256.94Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
F0WE18_9STRA2.050e-5053.22Uncharacterized protein AlNc14C71G4880 n=1 Tax=Alb... [more]
K0T113_THAOC2.300e-5052.33Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16225contigP-wetherbeei_contig16225:4..1155 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FIM0
Preferred nameC2CD5
PFAMsC2
Model size635
Max annot lvl2759|Eukaryota
KEGG koko:K20051
Hectar predicted targeting categoryother localisation
GOsGO:0000149,GO:0001505,GO:0001726,GO:0003674,GO:0005488,GO:0005509,GO:0005515,GO:0005543,GO:0005544,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005938,GO:0006810,GO:0006836,GO:0006886,GO:0006887,GO:0006906,GO:0006996,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007267,GO:0007268,GO:0007269,GO:0008104,GO:0008150,GO:0008286,GO:0008289,GO:0009719,GO:0009725,GO:0009987,GO:0010033,GO:0010243,GO:0010638,GO:0010827,GO:0010828,GO:0012506,GO:0015031,GO:0015630,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016079,GO:0016192,GO:0017156,GO:0017157,GO:0017158,GO:0019905,GO:0023052,GO:0023061,GO:0030276,GO:0030659,GO:0031090,GO:0031252,GO:0031253,GO:0031256,GO:0031338,GO:0031340,GO:0031410,GO:0031982,GO:0032386,GO:0032388,GO:0032587,GO:0032868,GO:0032869,GO:0032870,GO:0032879,GO:0032880,GO:0032940,GO:0033036,GO:0033043,GO:0033157,GO:0034613,GO:0034762,GO:0034764,GO:0038028,GO:0042221,GO:0042886,GO:0042995,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043434,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044433,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0045055,GO:0045184,GO:0046324,GO:0046326,GO:0046872,GO:0046903,GO:0046907,GO:0048284,GO:0048489,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048791,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051716,GO:0055085,GO:0060341,GO:0060627,GO:0061024,GO:0061025,GO:0065002,GO:0065007,GO:0065008,GO:0070201,GO:0070727,GO:0070887,GO:0071310,GO:0071375,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072657,GO:0072659,GO:0090087,GO:0090174,GO:0090313,GO:0090314,GO:0090316,GO:0097479,GO:0097480,GO:0097708,GO:0098590,GO:0098916,GO:0099003,GO:0099504,GO:0099536,GO:0099537,GO:0099568,GO:0099643,GO:0120025,GO:0120038,GO:1900076,GO:1900078,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1903305,GO:1903530,GO:1903533,GO:1903827,GO:1903829,GO:1904951,GO:1905475,GO:1905477,GO:1990778,GO:2001273,GO:2001275
Exons3
Evalue8.21e-61
EggNOG OGsKOG1031@1|root,KOG1031@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-27_000260.1
Descriptioninsulin receptor signaling pathway via phosphatidylinositol 3-kinase
Cds size633
COG categoryS
BRITEko00000,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186080.644925-CDS-P-wetherbeei_contig16225:3..1771683186080.644925-CDS-P-wetherbeei_contig16225:3..177Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16225 4..177 -
1683186080.6575203-CDS-P-wetherbeei_contig16225:386..5301683186080.6575203-CDS-P-wetherbeei_contig16225:386..530Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16225 387..530 -
1683186080.6671379-CDS-P-wetherbeei_contig16225:840..11551683186080.6671379-CDS-P-wetherbeei_contig16225:840..1155Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16225 841..1155 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16225.1.2prot_P-wetherbeei_contig16225.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16225 4..1155 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16225.1.2

>prot_P-wetherbeei_contig16225.1.2 ID=prot_P-wetherbeei_contig16225.1.2|Name=mRNA_P-wetherbeei_contig16225.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=211bp
MRPGYRRVRPCSYCHVPYHHAAAPFSNMRLVPCGICRRKWVAETVLATVE
PPPGLKTRGGGVLVEARVVRVQRRTPSGEADAMRISDHLPFVEYELQRQL
MLKLRLLGMNAAWAVHTQVQIGAALVIGTIAATACYVESLPPPAALQISR
GVEVRDAGDRRLVGLHKAIEQAAAINRQRLAALAPRRPRRTYRRRGNHRS
RPGETGEDGGG
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mRNA from alignment at P-wetherbeei_contig16225:4..1155-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16225.1.2 ID=mRNA_P-wetherbeei_contig16225.1.2|Name=mRNA_P-wetherbeei_contig16225.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1152bp|location=Sequence derived from alignment at P-wetherbeei_contig16225:4..1155- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGCCCGGGCTACCGCCGCGTCCGCCCCTGCTCGTACTGCCATGTGCC GTACCACCACGCCGCCGCGCCCTTCTCCAACATGCGGCTGGTGCCGTGCG GCATCTGCCGGCGGAAGTGGGTCGCCGAGACGGTGCTGGCAACCGTCGAG CCGCCACCGGGGCTCAAGACGCGCGGTGGGGGCGTACTGGTCGAGGCGCG GGTGGTGCGGGTCCAGCGCCGGACGCCCTCCGGAGAGGCGGATGCGATGC GGATCTCGGACCACCTGCCGTTCGTCGAGTACGAGCTGCAGCGGCAGCTC ATGCTCAAGTTGCGGGTGAGTGGGAGGGATTGGTGCGGATTTGATGTCGC AGCGGCAGACGACGGCGGTGGCGGCGGCGGAGGGGTCGGGCGGTTCCGGT TCCTTTCTGTAAAGTTTCGTTGCCATGCCCGACCCTTATGGGCTTTTCAA AGAGTGATACGGTCCCTGACCTCGGCCCGTTTCCGTCCACAAATGTGTTT CACTGCGTGCCACCATCGCCATCCACATTTTTTTGATTCGTCGCATCTCA CGTCCAAACGTGCGTCAACTTCTTCCTGCGACGCTCTTTCTCGCCCCGGC GCAATGCCCTGCGAATGCGGGGAAGCTGTTGGGCATGAACGCGGCGTGGG CAGTGCACACGCAGGTGCAGATTGGGGCGGCACTCGTCATCGGGACTATC GCCGCCACCGCCTGCTACGTCGAGAGCCTCCCGCCGCCCGCCGCACTGCA GATCTCTCGTGGCGTAGAGGTGCGTGCGTCACACATGTCCCCGCCTTCTG CTTTTCTGGGCAGCTGGAGTGGTCTATCTCCGCCCATTTTCGTGTTTCCT GTTCCGCATTCAATATGGCCCGTGTTGCTGTATCAGTCCTGCTCTGCGCA AATAGTCGCCACGGGCATTTTAGAAGGTTCTTTCTTAACTGATCGATTTA CCAATCCCTTTGTTTCTGGTTCGCTCAGGTTCGGGACGCCGGGGATCGGC GGCTGGTGGGGCTGCACAAGGCGATCGAGCAGGCGGCCGCAATCAACCGC CAGCGGCTGGCGGCGCTGGCGCCGCGTCGCCCCCGCCGCACCTACCGGCG CCGCGGCAACCATCGCAGCCGCCCCGGCGAAACCGGTGAGGACGGCGGCG GC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16225:4..1155-

>mRNA_P-wetherbeei_contig16225.1.2 ID=mRNA_P-wetherbeei_contig16225.1.2|Name=mRNA_P-wetherbeei_contig16225.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=633bp|location=Sequence derived from alignment at P-wetherbeei_contig16225:4..1155- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGCCCGGGCTACCGCCGCGTCCGCCCCTGCTCGTACTGCCATGTGCC
GTACCACCACGCCGCCGCGCCCTTCTCCAACATGCGGCTGGTGCCGTGCG
GCATCTGCCGGCGGAAGTGGGTCGCCGAGACGGTGCTGGCAACCGTCGAG
CCGCCACCGGGGCTCAAGACGCGCGGTGGGGGCGTACTGGTCGAGGCGCG
GGTGGTGCGGGTCCAGCGCCGGACGCCCTCCGGAGAGGCGGATGCGATGC
GGATCTCGGACCACCTGCCGTTCGTCGAGTACGAGCTGCAGCGGCAGCTC
ATGCTCAAGTTGCGGCTGTTGGGCATGAACGCGGCGTGGGCAGTGCACAC
GCAGGTGCAGATTGGGGCGGCACTCGTCATCGGGACTATCGCCGCCACCG
CCTGCTACGTCGAGAGCCTCCCGCCGCCCGCCGCACTGCAGATCTCTCGT
GGCGTAGAGGTTCGGGACGCCGGGGATCGGCGGCTGGTGGGGCTGCACAA
GGCGATCGAGCAGGCGGCCGCAATCAACCGCCAGCGGCTGGCGGCGCTGG
CGCCGCGTCGCCCCCGCCGCACCTACCGGCGCCGCGGCAACCATCGCAGC
CGCCCCGGCGAAACCGGTGAGGACGGCGGCGGC
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