mRNA_P-wetherbeei_contig1614.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1614.3.1 vs. uniprot
Match: A0A835Z0R4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0R4_9STRA) HSP 1 Score: 296 bits (758), Expect = 6.390e-95 Identity = 150/244 (61.48%), Postives = 192/244 (78.69%), Query Frame = 2
Query: 278 MKVATGLRGDIVDQLGLNGRRDVDRIAAILGGLVVGSFLGSSAVIQALPGPDIIRWTVSWSIAFLPYGFLSLGLAKPGLLQAAVVWLQRLDGDFRERLLRHEAGHFLMGHLCGLPVQEYQADAVTNAVQFYPLSDSSAGGSLWRRRGLSHDDVTRLAIVSLGGIVAECAAYGNSEGGYADLSQLQEFVRMAEPPLTDREQQERVRFAAVMAHTYLKTHDAPFEALLAAFRRKASVAECMKALED 1009
M ATG+RGDI+D+LGLNGRRD+DRIA IL GLVVGSFL S+++I+ LPGPDI+R+T SW IAF+PYGFL+LG+AKP LLQ ++V ++ ++RERL RHEAGHFL+G+LCG+P++ YQAD+VTNAV F+P SS ++ RR + ++ RLA VSLGGIVAEC +G SEGGYADL QL +R E L+DREQQ+RVRFAAVMAH+YLKTH + L AA +R ASV +C++A+ED
Sbjct: 1 MMAATGIRGDIIDKLGLNGRRDIDRIAFILFGLVVGSFLSSTSLIEFLPGPDIVRFTASWVIAFIPYGFLTLGIAKPALLQKSLVKAFSVNPEYRERLARHEAGHFLVGYLCGMPIESYQADSVTNAVAFFPAFYSS--DAMLRR--IPEPELLRLAAVSLGGIVAECLRFGTSEGGYADLMQLNALLRCGEERLSDREQQDRVRFAAVMAHSYLKTHGDALDRLTAAVQRSASVTDCIRAIED 240
BLAST of mRNA_P-wetherbeei_contig1614.3.1 vs. uniprot
Match: A0A7S4D6I6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6I6_HETAK) HSP 1 Score: 234 bits (597), Expect = 6.190e-69 Identity = 133/330 (40.30%), Postives = 193/330 (58.48%), Query Frame = 2
Query: 197 VMSALAALKEDGQLSLYNSSNPFY----LAEMKVATGLRG--DIVDQLGLNGRRDVDRIAAILGGLVVGSFLGSSAVIQALPGPDIIRWTVSWSIAFLPYGFLSLGLAKPGLLQAAVVWLQR-LDGDFRERLLRHEAGHFLMGHLCGLPVQEYQADAVTNAVQFYPLSDS----------------------------------------------------SAGGSLWRRRGLSHDDVTRLAIVSLGGIVAECAAYGNSEGGYADLSQLQEFVRMAEPPLTDREQQERVRFAAVMAHTYLKTHDAPFEALLAAFRRKASVAECMKALED 1009
V++ + +K +G ++L+NS+ +Y + ++++ T +RG D++ LGL+G+ D+D+IA+IL ++VGS L S V+Q LPGP+I+RW+V+W +AF PYG+L+LGL+ P +LQ ++ + R +D +RERLL HEAGHFL+G+L G+PVQ Y ADA NAVQFYPL+ G ++ RR LS D + RL + SL G++AE G EGGYADL QLQ F+ E LTD++QQE VR+ AV A T L+ A AL+ AFRR ASV EC++ +E+
Sbjct: 40 VVAIMEIMKSNGDINLWNSTFLYYQRYGVGDVRMLTRIRGEKDLIQTLGLDGKSDIDKIASILFAVIVGSILSSLTVLQNLPGPEIVRWSVTWLLAFAPYGYLALGLSFPAVLQRLLIQIFRAVDPAYRERLLYHEAGHFLVGYLVGMPVQSYSADAPINAVQFYPLAGLPQEIKQRSRNTEIPPESVKRNAKEEEEMSIEKLRQLWTKINQDPNGPTRRAVEEGAAIGRRGALSLDQLQRLTVTSLAGVMAEVVQLGEGEGGYADLVQLQNFLYFCEQRLTDQQQQEYVRWGAVQAFTLLEVRRAELAALVEAFRRGASVPECLRVIEE 369
BLAST of mRNA_P-wetherbeei_contig1614.3.1 vs. uniprot
Match: A0A7S0XV52_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XV52_HEMAN) HSP 1 Score: 183 bits (464), Expect = 1.900e-50 Identity = 117/282 (41.49%), Postives = 167/282 (59.22%), Query Frame = 2
Query: 197 VMSALAALKEDGQLSLYNSSNPFY--LAEMKVATGLRGDIV-DQLGLNGRRDVDRIAAILGGLVVGSFLGSSAVIQALPGPDI-------IRWTVSWSIAFLPYGFLSLGLAKPGLLQAAVVWLQRL-DGDFRERLLRHEAGHFLMGHLCGLPVQEYQAD-AVTNAVQFYPLSDSSAGGSLWRRRGLSHDDVTRLAIVSLGGIVAECAAYGNSEGGYADLSQLQEFVRMAEPPLTDREQQERVRFAAVMAHTYLKTHDAPFEALLAAFRRKASVAECMKALE 1006
VM AL K G+ +++N++ P + + + +V RG I D + G D++ ++ + S L S+ A+P D+ R+ V+ +I P+ FL +GL+ PGLLQA ++ +RL G+FR+RL+RHEAGHFL+G+ G+P+ EY+AD A+ NA QF+ DS G R LSHD V L VS+ G+VAE Y GGYADLSQLQ F+ A P L D+EQQERVR+ +V+A+T L+TH FEAL+ R SV C+K +E
Sbjct: 15 VMKALNDAKGAGEAAVWNNTQPMFRRVRQGEVRMLTRGVIKEDTIDTRGDDDMEVLSTSFYATLATSMLLSTWASIAIPNMDLPFLRGSDTRFFVTIAIGSTPFAFLGMGLSLPGLLQAILIQARRLVSGEFRDRLIRHEAGHFLVGYCLGVPIAEYKADDAILNACQFF--EDSFDTGPA---RRLSHDQVDTLCAVSMAGVVAESITYEKGLGGYADLSQLQGFLSRATPILNDKEQQERVRWGSVLAYTVLRTHGEAFEALVECMGRGESVESCVKVIE 291
BLAST of mRNA_P-wetherbeei_contig1614.3.1 vs. uniprot
Match: A0A7S0V097_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0V097_9CRYP) HSP 1 Score: 172 bits (437), Expect = 1.370e-46 Identity = 110/276 (39.86%), Postives = 163/276 (59.06%), Query Frame = 2
Query: 188 GKAVMSALAALKEDGQLSLYNSSNPFY--LAEMKVATGLRGDIV-DQLGLNGRRDVDRIAAILGGLVVGSFLGSSAVIQALPGPDI-------IRWTVSWSIAFLPYGFLSLGLAKPGLLQAAVVWLQR-LDGDFRERLLRHEAGHFLMGHLCGLPVQEYQA-DAVTNAVQFYPLSDSSAGGSLWRRRGLSHDDVTRLAIVSLGGIVAECAAYGNSEGGYADLSQLQEFVRMAEPPLTDREQQERVRFAAVMAHTYLKTHDAPFEALLAAFRRKAS 979
G+ V AL K+ G+ +++NS+ P + + + +V RG I D + G D++ ++ + S S+ A+P DI +R+ V+ +I P+ FL LGL+ PGLLQA ++ +R + G+FR+RL+RHEAGHFL+G+ G+P+ EY A DA+ NA QF+ + + R L+H+ V L VS+ G+VAE AY GGYADLSQLQ F+ A P L DREQQ++VR+ +V+A+T L+TH EAL+ A R AS
Sbjct: 16 GQLVRKALNDAKQAGEATVWNSTQPMFRRVRQGEVRMLTRGVIKEDTIDTRGDDDMEVLSTSFYATLATSMALSTWASIAIPNMDIPFLRGSDVRFFVTIAIGSSPFAFLGLGLSLPGLLQAILIQARRAVSGEFRDRLVRHEAGHFLVGYCLGVPIAEYAAGDAILNACQFFEDAFDTPA------RRLTHNQVDTLCAVSMAGVVAESLAYDKGLGGYADLSQLQGFLSRATPILDDREQQDKVRWGSVLAYTVLRTHGGALEALVEAMGRGAS 285
BLAST of mRNA_P-wetherbeei_contig1614.3.1 vs. uniprot
Match: A0A7S4KRX3_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KRX3_GUITH) HSP 1 Score: 174 bits (441), Expect = 4.030e-46 Identity = 110/292 (37.67%), Postives = 168/292 (57.53%), Query Frame = 2
Query: 197 VMSALAALKEDGQLSLYNSSNPFY----LAEMKVATGLRGDIV-DQLGLNGRRDVDRIAAILGGLVVGSFLGSSAVIQALPG--------PDIIRWTVSWSIAFLPYGFLSLGLAKPGLLQAAVVWLQRLDG-DFRERLLRHEAGHFLMGHLCGLPVQEYQAD-AVTNAVQFYPLSDSSAGGSLWRRRGLSHDDVTRLAIVSLGGIVAECAAYGNSEGGYADLSQLQEFVRMAEPPLTDREQQERVRFAAVMAHTYLKTHDAPFEALLAAFRRKASVAECMKALEDVAAAGR 1027
V+ AL +LKE QLS+++S Y + E+++ T RG + D L+G D++ + ++ S L S+ +P D++R+ V++ + LP+ FL +GL+ PGLLQ ++ ++R ++RERLL HEAGHFL+G+ GLP+ Y AD + NAVQF+ + S +SH+ + L VS G+VAE +G++ GGYAD SQLQ F+ + P L DREQQERVR+ V A T LK + +AL+ A RK+S+++C+ A+E GR
Sbjct: 92 VVDALNSLKERSQLSMWDSVPSLYRRVSVGEVRLLT--RGLVKEDTFDLSGNNDMEVLNVSFYATLLSSMLLSTLAACFIPEYPNLPFLQGDLLRYVVTFGLGSLPFAFLGMGLSVPGLLQLVLIQIRRAASQEYRERLLWHEAGHFLVGYCLGLPIAAYSADDPILNAVQFFDSEEDS----------ISHEFLDVLCAVSTAGVVAEAIRFGDAIGGYADFSQLQSFLYRSRPRLNDREQQERVRWGCVAAFTILKNREESLKALIEAMSRKSSISQCILAIESQQQLGR 371
BLAST of mRNA_P-wetherbeei_contig1614.3.1 vs. uniprot
Match: A0A5J4YTJ7_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YTJ7_PORPP) HSP 1 Score: 172 bits (437), Expect = 1.200e-44 Identity = 109/279 (39.07%), Postives = 154/279 (55.20%), Query Frame = 2
Query: 197 VMSALAALKEDGQLSLYNSSN----PFYLAEMKVATGLRGDIVDQLGLNGRRDVDRIAAILGGLVVGSFLGSSAVIQALPGPDIIRWTVSWSIAFLPYGFLSLGLAKPGLLQAAVVWLQR-LDGDFRERLLRHEAGHFLMGHLCGLPVQEYQADAVTNAVQFYPLSDSSAGGSLWRRRGLSHDDVTRLAIVSLGGIVAECAAYGNSEGGYADLSQLQEFVRMAEPPLTDREQQERVRFAAVMAHTYLKTHDAPFEALLAAFRRKASVAECMKALEDVAA 1018
V+S L +KE G L Y S+ P EM++ T R L G D I ++ S + A+ Q LPGPD++R+ ++S+ LPY FL G++ P LLQ A++ +R +FR RL HEAGHFL+G+L G+PV+EY+ADAV NAVQFY + + S R +H+ V LAI+SL G+V+E + + GGYAD QLQ + PPL R Q +VR+ V A+T L+ + A E L A + EC+ A+ED +A
Sbjct: 194 VVSKLEEMKEQGLLKKYGSAQTLARPISFQEMQLLTR-RKVTPKTLDFKGEGDKSAITVSFFAVLALSISSALAIEQYLPGPDVVRYAAAFSVGGLPYVFLLFGISVPDLLQFALILARRTFSKEFRTRLAAHEAGHFLVGYLLGVPVREYKADAVMNAVQFYFDFEEAQQDSKPLR--FTHEQVDELAIISLAGVVSEILLFKQASGGYADFMQLQRVANRSVPPLEPRAVQAKVRWGCVRAYTLLQQNAAALEQLTAKMAVGRPLDECIAAIEDASA 469
BLAST of mRNA_P-wetherbeei_contig1614.3.1 vs. uniprot
Match: A0A7S3AC95_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3AC95_9RHOD) HSP 1 Score: 163 bits (413), Expect = 1.560e-42 Identity = 106/274 (38.69%), Postives = 155/274 (56.57%), Query Frame = 2
Query: 209 LAALKEDGQLSLYN----SSNPFYLAEMKVATGLRGDIVDQLGLNGRRDVDRIAAILGGLVVGSFLGSSAVIQALPGPDIIRWTVSWSIAFLPYGFLSLGLAKPGLLQAAVVWLQ-RLDGDFRERLLRHEAGHFLMGHLCGLPVQEYQADAVTNAVQFYP---LSDSSAGGSLWRRRGLSHDDVTRLAIVSLGGIVAECAAYGNSEGGYADLSQLQEFVRMAEPPLTDREQQERVRFAAVMAHTYLKTHDAPFEALLAAFRRKASVAECMKALE 1006
L L E G L +N S P +AE+K+ L D LGL + +D A V+G + + QA+ D+ ++ S+ I L FL++G PGLL A + + L DF+ERLL HEAGHFL G+LCG+PV++Y + +T V + L++ A G + S DDV L++V+L G AE YG +EGG ADL+ LQ + +PP+ +EQQE+ R+ A+MA+T LK + A +EAL+ A + K SVA+C+KA+E
Sbjct: 73 LDGLSEQGDLKKWNRQKLSVRPVSIAELKMNARLDAD---SLGLTQKNTIDLKLASFA--VIGGSSLLAVLCQAVFSGDLAYFS-SYLIGGLSIAFLAIGSTAPGLLTALITTISANLRPDFKERLLLHEAGHFLAGYLCGVPVKKYDVNPITTGVTIFGGKFLTEDVAQGRV------SRDDVNALSVVALAGPAAEVIKYGQAEGGMADLNLLQNLLVRTKPPMLSKEQQEQTRWGALMAYTVLKKYSAEYEALVEAMKAKKSVADCIKAIE 334
BLAST of mRNA_P-wetherbeei_contig1614.3.1 vs. uniprot
Match: A0A7S2G7P9_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G7P9_9STRA) HSP 1 Score: 161 bits (407), Expect = 6.260e-42 Identity = 90/232 (38.79%), Postives = 131/232 (56.47%), Query Frame = 2
Query: 413 QALPGPDIIRWTVSWSIAFLPYGFLSLGLAKPGLLQAAVVWLQ-RLDGDFRERLLRHEAGHFLMGHLCGLPVQEYQADAVTNAVQFYPLSDSSA---------------------------GGSL------WRRRGLSHDDVTRLAIVSLGGIVAECAAYGNSEGGYADLSQLQEFVRMAEPPLTDREQQERVRFAAVMAHTYLKTHDAPFEALLAAFRRKASVAECMKALE 1006
A+PG I+R+ +SW ++F P+ FL +AKP LQ +V + L+ + R+R+ RHEAGHFL+GHLCGLPV +Y A+++ NAVQF+PL D G SL W RG+ LA+VS+ G++AE YG ++GGYAD SQLQE + +PPL D +++ VR+AA+MA+T L+ H E L+ + SV C++ L+
Sbjct: 12 NAIPG--IVRFVLSWVLSFAPFAFLGWSVAKPDQLQRIIVKVNCALNPEVRQRMARHEAGHFLVGHLCGLPVSDYSANSIENAVQFWPLDDPERTKALRSVMGMRGESPAWGDAEDSSGRPGSSLMNPRRVWPYRGVDPATTDLLAVVSVAGVMAEILEYGEAKGGYADFSQLQEILEYCDPPLDDAAKEDLVRWAALMANTVLRRHADAMEVLVTSVAEGRSVTACIQLLD 241
BLAST of mRNA_P-wetherbeei_contig1614.3.1 vs. uniprot
Match: A0A7S2SMI0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SMI0_9STRA) HSP 1 Score: 154 bits (388), Expect = 7.070e-40 Identity = 88/178 (49.44%), Postives = 122/178 (68.54%), Query Frame = 2
Query: 185 NGKAVMSALAALKEDGQLSLYNSS---NPFYLAEMKVATGLR---GDIVDQLGLNGRRDVDRIAA-ILGGLVVGSFLGSSAVIQALPGPDIIRWTVSWSIAFLPYGFLSLGLAKPGLLQAAVVWLQRLD-GDFRERLLRHEAGHFLMGHLCGLPVQEYQADAVTNAVQFYPLSDSSAG 694
+G+ S L AL+EDGQ L+NS+ ++E ++ T R GD++ +L ++G RDVDRIAA +L + L S AV +LPGP+ +R+ + W + F PY FLSLGLA PG LQ ++ +QRL +R+RLLRHEAGHFL+G+L GLPV+ Y A+AV NAVQF+PL+DS+AG
Sbjct: 14 SGETARSMLKALREDGQARLWNSTALVGSRRVSEAELRTLARIPGGDLISKLNIDGGRDVDRIAAGLLATTGISFTLASQAV--SLPGPESLRFALVWLLTFTPYIFLSLGLALPGSLQTGLIQVQRLALPTYRDRLLRHEAGHFLVGYLIGLPVRSYSANAVANAVQFWPLADSNAG 189
BLAST of mRNA_P-wetherbeei_contig1614.3.1 vs. uniprot
Match: W7TKF4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKF4_9STRA) HSP 1 Score: 156 bits (395), Expect = 1.020e-38 Identity = 93/276 (33.70%), Postives = 149/276 (53.99%), Query Frame = 2
Query: 275 EMKVATGLRGDIVDQLGLNGRRDVDRIAAILGGLVVGSFLGSSAVIQALPGPDIIRWTVSWSIAFLPYGFLSLGLAKPG-LLQAAVVWLQRLDGDFRERLLRHEAGHFLMGHLCGLPVQEYQADAVTNAVQF---------------YPLSDSSAGGSL---------------WRRRG-LSHDDVTRLAIVSLGGIVAECAAYGNSEGGYADLSQLQEFVRMAEPPLTDREQQERVRFAAVMAHTYLKTHDAPFEALLAAFRRKASVAECMKALE 1006
+++V +R + LG V+R+ + + ++ S + + LPGPDI+RW + + +P+ ++SLGL+ P L++AA L L+ +++ERLLRHEAGHFL+G+LCGLPV Y NAV+F P S G ++ W RG L +++ RL +VSL G+V+E AYG +EGG DLSQL +A+P ++DREQ+ + + + ++ ++ ++ AL+AAF R SV CM+ +E
Sbjct: 191 DLRVYARMRERVEKALGFTASPAVERVESGIAIVMALSITSALTTLDKLPGPDIVRWFATSFLVSIPFAYISLGLSFPEVLMRAANQVLFALNREYKERLLRHEAGHFLVGYLCGLPVLSYSVSGRLNAVEFAQILSFAQEAAAAATVPQDSSETGPAMLPSKSGPVSREEAERWTPRGVLLKEELARLTVVSLAGVVSEYIAYGKAEGGGNDLSQLLALFNLADPAMSDREQERWLNWGVLQSYNMIRQNEKALVALMAAFERGESVVTCMQIVE 466 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1614.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1614.3.1 >prot_P-wetherbeei_contig1614.3.1 ID=prot_P-wetherbeei_contig1614.3.1|Name=mRNA_P-wetherbeei_contig1614.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=280bp MSALAALKEDGQLSLYNSSNPFYLAEMKVATGLRGDIVDQLGLNGRRDVDback to top mRNA from alignment at P-wetherbeei_contig1614:4966..6891+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1614.3.1 ID=mRNA_P-wetherbeei_contig1614.3.1|Name=mRNA_P-wetherbeei_contig1614.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1926bp|location=Sequence derived from alignment at P-wetherbeei_contig1614:4966..6891+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1614:4966..6891+ >mRNA_P-wetherbeei_contig1614.3.1 ID=mRNA_P-wetherbeei_contig1614.3.1|Name=mRNA_P-wetherbeei_contig1614.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=840bp|location=Sequence derived from alignment at P-wetherbeei_contig1614:4966..6891+ (Phaeothamnion wetherbeei SAG_119_79)back to top |