mRNA_P-wetherbeei_contig16136.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16136.1.1
Unique NamemRNA_P-wetherbeei_contig16136.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16136.1.1 vs. uniprot
Match: A0A127EW01_9HYPH (Vitamin-B12 independent methionine synthase n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EW01_9HYPH)

HSP 1 Score: 590 bits (1521), Expect = 2.840e-209
Identity = 287/386 (74.35%), Postives = 330/386 (85.49%), Query Frame = 1
Query:    1 MNRSTDRILTTHAGSLPRPADLLDMLQAKEQGKPVDEAARAARLPGAVKEIVDKQVDLGIDIVDDGEYSKPSFVTYTNERLGGFEIDTEHRHRGPWVGSREALSFPEFYAQLHVGQRQDRMVCTGPITYKGHAILQRDIANLKAATKGKKIKDVFMPAISPSNIEEWQRNAYYKTQDEYIAAIGEAMREEYKAIVEAGFLLQIDDPRLVSYYLVKPDASIAECRRWANQRVELLNHALRGIPTEKIRHHTCYGINMGPRVHDMEVKHLLDIILKIRAGAYSFEASNPRHEHEWKIWGSAKLPKGAILIPGVISHSTVLVEHPELVAERIVRFASMVGKENVIAGSDCGFATFAGSKEVHPSIVWAKMKAMTDGARLASKELWKKAV 1158
            M  ST RI+TTHAGSLPRPAD+++ML AK +GKP+DE A+ ARLPGAVK+IV KQ++LG+D++DDGEYSKPSFVTY N+RL GFE D     RG W  SRE L+FPEFYA      R  RMVCTGP+TY+G ++LQRDIANLKAA  G    + FMPAIS +NIE+W  N YYK+ +EY+ AI EAMREEYKAIV+AGFL+QIDDPRLVSYYLV P+A+I ECR+WA  RVE LNHALRGIP EKIRHHTCYGINMGPRVHDMEVKHL+DII+KI AGAYSFEA+NPRHEHEWK+WG+AKLPK  +LIPGVISHSTVLVEHPELVAERI+R+AS+VG+E VIAGSDCGFATFAGSKEVHPSIVWAK +A+ +GARLASKELWKKA 
Sbjct:    1 MQHSTKRIITTHAGSLPRPADMIEMLVAKAEGKPIDEDAQRARLPGAVKDIVKKQIELGLDVIDDGEYSKPSFVTYVNDRLAGFEADANAPRRGSWSESREGLAFPEFYASAPA--RNIRMVCTGPVTYRGQSLLQRDIANLKAAI-GDTGVEAFMPAISVANIEDWMLNRYYKSAEEYLFAIAEAMREEYKAIVDAGFLVQIDDPRLVSYYLVNPNATIEECRKWAVLRVEALNHALRGIPPEKIRHHTCYGINMGPRVHDMEVKHLIDIIMKINAGAYSFEAANPRHEHEWKVWGNAKLPKDKVLIPGVISHSTVLVEHPELVAERIMRYASLVGRERVIAGSDCGFATFAGSKEVHPSIVWAKFEALAEGARLASKELWKKAA 383          
BLAST of mRNA_P-wetherbeei_contig16136.1.1 vs. uniprot
Match: A0A537SS84_9PROT (Cobalamin-independent methionine synthase II family protein n=6 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537SS84_9PROT)

HSP 1 Score: 569 bits (1466), Expect = 2.570e-201
Identity = 271/382 (70.94%), Postives = 322/382 (84.29%), Query Frame = 1
Query:    1 MNRSTDRILTTHAGSLPRPADLLDMLQAKEQGKPVDEAARAARLPGAVKEIVDKQVDLGIDIVDDGEYSKPSFVTYTNERLGGFEIDTEHRHRGPWVGSREALSFPEFYAQLHVGQRQDRMVCTGPITYKGHAILQRDIANLKAATKGKKIKDVFMPAISPSNIEEWQRNAYYKTQDEYIAAIGEAMREEYKAIVEAGFLLQIDDPRLVSYYLVKPDASIAECRRWANQRVELLNHALRGIPTEKIRHHTCYGINMGPRVHDMEVKHLLDIILKIRAGAYSFEASNPRHEHEWKIWGSAKLPKGAILIPGVISHSTVLVEHPELVAERIVRFASMVGKENVIAGSDCGFATFAGSKEVHPSIVWAKMKAMTDGARLASKELW 1146
            M RST+RILTTH GSLPRPADLLD++QA+EQGK VDE A AARL  AV +IV KQ++LGIDIVDDGE+ KPSFV+Y NERLGGFE+DTE     PW GSREA SFPEFY Q  +  R + MVCT PITY+G A L+ DI NLKAA  G K ++ FMPAISP+++ +WQRNAYYK+ +EY+ AI +A+REEY+AIV AG LLQ+DDP LV+Y++ +PD ++ + R+WA  RVE LNHALR I  EK+RHHTCYGINMGPRVHD+E+KH++D+IL IRAGAYSFEA+NPRHEHEWK+W SAKLP G  LIPGVISHSTVLVEHPELVAERI R+A +VG+ENVIAGSDCGFATFAGSKEVHPSIVWAK K++T+GARLAS++LW
Sbjct:    1 MKRSTERILTTHVGSLPRPADLLDVVQAREQGKRVDEKAHAARLRAAVADIVRKQIELGIDIVDDGEFGKPSFVSYVNERLGGFEVDTEMPRPSPWAGSREAKSFPEFYGQGQLAARPNHMVCTAPITYRGMAQLRIDIDNLKAALDGAKPEEAFMPAISPASVADWQRNAYYKSDEEYLFAIADALREEYEAIVNAGLLLQVDDPHLVTYWIKEPDLTLEQFRKWAQLRVEALNHALRNIAPEKVRHHTCYGINMGPRVHDLELKHVIDLILNIRAGAYSFEAANPRHEHEWKVWESAKLPAGKALIPGVISHSTVLVEHPELVAERICRYAKLVGRENVIAGSDCGFATFAGSKEVHPSIVWAKFKSLTEGARLASRQLW 382          
BLAST of mRNA_P-wetherbeei_contig16136.1.1 vs. uniprot
Match: A0A1Q7BKZ6_9PROT (Meth_synt_2 domain-containing protein n=1 Tax=Alphaproteobacteria bacterium 13_2_20CM_2_64_7 TaxID=1803507 RepID=A0A1Q7BKZ6_9PROT)

HSP 1 Score: 565 bits (1456), Expect = 7.930e-200
Identity = 269/382 (70.42%), Postives = 317/382 (82.98%), Query Frame = 1
Query:    1 MNRSTDRILTTHAGSLPRPADLLDMLQAKEQGKPVDEAARAARLPGAVKEIVDKQVDLGIDIVDDGEYSKPSFVTYTNERLGGFEIDTEHRHRGPWVGSREALSFPEFYAQLHVGQRQDRMVCTGPITYKGHAILQRDIANLKAATKGKKIKDVFMPAISPSNIEEWQRNAYYKTQDEYIAAIGEAMREEYKAIVEAGFLLQIDDPRLVSYYLVKPDASIAECRRWANQRVELLNHALRGIPTEKIRHHTCYGINMGPRVHDMEVKHLLDIILKIRAGAYSFEASNPRHEHEWKIWGSAKLPKGAILIPGVISHSTVLVEHPELVAERIVRFASMVGKENVIAGSDCGFATFAGSKEVHPSIVWAKMKAMTDGARLASKELW 1146
            M RSTDRILTTH GSLPRP DLLD++QA+E+GK VD  A AARL  AV EIV  Q+DLGIDI+DDGE+ KPSFV+Y NERLGGFE+D +   + PW GSREA SFPEFY Q HV  RQ+ MVCT PI Y+G A LQ DI NLKAA  G K ++VFMPAISP+++ +WQRNAYYKT++EY+ AI +A+REEY+AIV AG LLQ+DDP LV+Y++ +PD ++ + R+WA  RVE LNHALR I  EK+RHHTCYGINMGPR+HD+E KH++D+ILKIRAGAYSFEA+NPRHEHEWKIW S KLP G  LIPGVISHSTVLVEHPELVAERI R+A +VG+ENVIAGSDCGFATFAGSKEVHPSIVWAK  ++  GA LAS++LW
Sbjct:    1 MKRSTDRILTTHVGSLPRPPDLLDVVQAREEGKAVDAKAHAARLRAAVAEIVRTQIDLGIDIIDDGEFGKPSFVSYVNERLGGFEVDKDMPRQSPWAGSREARSFPEFYGQGHVAARQNHMVCTAPIAYRGTAQLQTDIDNLKAALNGAKAEEVFMPAISPASVADWQRNAYYKTEEEYLFAIADALREEYEAIVNAGVLLQVDDPHLVTYWIKEPDLTLEQFRKWAQFRVEALNHALRNIAPEKVRHHTCYGINMGPRIHDLEFKHIVDLILKIRAGAYSFEAANPRHEHEWKIWESTKLPPGKSLIPGVISHSTVLVEHPELVAERICRYAKVVGRENVIAGSDCGFATFAGSKEVHPSIVWAKFTSLVKGASLASQQLW 382          
BLAST of mRNA_P-wetherbeei_contig16136.1.1 vs. uniprot
Match: A0A1F2RBJ7_9BACT (Methionine synthase n=1 Tax=Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28 TaxID=1797180 RepID=A0A1F2RBJ7_9BACT)

HSP 1 Score: 536 bits (1381), Expect = 2.420e-188
Identity = 262/388 (67.53%), Postives = 315/388 (81.19%), Query Frame = 1
Query:    1 MNRSTDRILTTHAGSLPRPADLLDMLQAKEQGKPVDEAARAARLPGAVKEIVDKQVDLGIDIVDDGEYSKPSFVTYTNERLGGFEIDTEHRHRG-PWVGSREALSFPEFY-AQLHVGQ----RQDRMVCTGPITYKGHAILQRDIANLKAATKGKKIKDVFMPAISPSNIEEWQRNAYYKTQDEYIAAIGEAMREEYKAIVEAGFLLQIDDPRLVSYYLVKPDASIAECRRWANQRVELLNHALRGIPTEKIRHHTCYGINMGPRVHDMEVKHLLDIILKIRAGAYSFEASNPRHEHEWKIWGSAKLPKGAILIPGVISHSTVLVEHPELVAERIVRFASMVGKENVIAGSDCGFATFAGSKEVHPSIVWAKMKAMTDGARLASKELW 1146
            M RST  ILTTH GSLPRP DL+DM++AK+ GKP D  A A RL  AV E+V KQV+LGIDIVDDGE  KPSF+TY +ERLGG E       RG PW GSRE  SFPE+Y A    G     RQ +MVCTGPITY+G   LQRDIANLKAA +G K ++ F+PAISPSNIE+W +N YYKTQ+EY+ AI +AM EEYKAIV+AG L+Q+DDPRLV+YY+++PDA++ +CRRWA  RVE LNHALRGIP ++IR+HTCY INMGPR+HDME+K ++D+ILK+ AGAYSFEASNPRHEHEW++W   KLP+G +LIPG I+ STVLVEHPELVAERI+RFA +VG+EN+IAG+DCGFATFAGS E+HPSIVWAK  A+ +GARLA+KELW
Sbjct:    1 MKRSTSGILTTHVGSLPRPQDLMDMMEAKQAGKPFDGEAYATRLRSAVAEMVRKQVELGIDIVDDGELGKPSFLTYVHERLGGCEPGGP---RGSPWAGSREVQSFPEYYEAAARSGASPAGRQVQMVCTGPITYRGQKPLQRDIANLKAALQGMKTEEAFLPAISPSNIEDWYKNQYYKTQEEYLFAIADAMHEEYKAIVDAGLLVQVDDPRLVTYYVLRPDATVEQCRRWAAVRVEALNHALRGIPEDRIRYHTCYSINMGPRLHDMELKDIVDVILKVHAGAYSFEASNPRHEHEWRVWERVKLPEGKVLIPGFITQSTVLVEHPELVAERILRFAKVVGRENIIAGADCGFATFAGSLEIHPSIVWAKFNALVEGARLATKELW 385          
BLAST of mRNA_P-wetherbeei_contig16136.1.1 vs. uniprot
Match: A0A2V6PJY5_9BACT (Methionine synthase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6PJY5_9BACT)

HSP 1 Score: 523 bits (1348), Expect = 2.610e-183
Identity = 248/387 (64.08%), Postives = 310/387 (80.10%), Query Frame = 1
Query:    1 MNRSTDRILTTHAGSLPRPADLLDMLQAKEQGKPVDEAARAARLPGAVKEIVDKQVDLGIDIVDDGEYSKPSFVTYTNERLGGFEIDTEHRHRGPWVGSREALSFPEFYAQLHVGQ-----RQDRMVCTGPITYKGHAILQRDIANLKAATKGKKIKDVFMPAISPSNIEEWQRNAYYKTQDEYIAAIGEAMREEYKAIVEAGFLLQIDDPRLVSYYLVKPDASIAECRRWANQRVELLNHALRGIPTEKIRHHTCYGINMGPRVHDMEVKHLLDIILKIRAGAYSFEASNPRHEHEWKIWGSAKLPKGAILIPGVISHSTVLVEHPELVAERIVRFASMVGKENVIAGSDCGFATFAGSKEVHPSIVWAKMKAMTDGARLASKELW 1146
            M RSTDRILTTH GSLPRP D+L+M++AK  G+P DE+A AAR+  AV EIV KQ DLGID+VDDGE  KP F+ Y N+RL GFE D + R   PW GSRE L FPEFY            R   MVCTGPITYKG   +Q DI NLKAA +G ++++ F+PAISP+++E+WQ+N YYKT ++Y+ AI EAMREEYKAI +AG L+QIDDP + ++Y+  P+ S+A+ R WA  RVE LNHALR IP ++IR HTCYGIN+GPRVHD+E+KH +D++LKIRAG+YSFEA+NPRHEHEW++W + K+P+GA+LIPGVISHSTVLVEHPELVAERI +FA +VG+ENVIAG+DCGFATFAGS+E+HPS+VWAK +A+ +GARLA+ ELW
Sbjct:    1 MKRSTDRILTTHVGSLPRPPDVLEMIRAKSAGRPPDESAYAARVRSAVSEIVKKQADLGIDVVDDGEMGKPGFIPYVNDRLAGFEPDRDARP-SPWGGSREHLEFPEFYEWFGRTMPTPPARALHMVCTGPITYKGARHVQADIDNLKAALRGARVEEAFLPAISPTSVEDWQKNRYYKTDEDYLFAIAEAMREEYKAITDAGILVQIDDPHIATHYVSHPELSVAQIRTWAEVRVEALNHALRDIPRDRIRWHTCYGINIGPRVHDLELKHFVDVMLKIRAGSYSFEAANPRHEHEWRVWETVKVPEGAVLIPGVISHSTVLVEHPELVAERIQKFAGIVGRENVIAGADCGFATFAGSEEIHPSVVWAKFRALVEGARLATTELW 386          
BLAST of mRNA_P-wetherbeei_contig16136.1.1 vs. uniprot
Match: A0A363TR82_9BRAD (Methionine synthase n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TR82_9BRAD)

HSP 1 Score: 523 bits (1346), Expect = 5.650e-183
Identity = 248/384 (64.58%), Postives = 303/384 (78.91%), Query Frame = 1
Query:    1 MNRSTDRILTTHAGSLPRPADLLDMLQAKEQGKPVDEAARAARLPGAVKEIVDKQVDLGIDIVDDGEYSKPSFVTYTNERLGGFEIDTEHRHRGPWVGSREALSFPEFYAQ--LHVGQRQDRMVCTGPITYKGHAILQRDIANLKAATKGKKIKDVFMPAISPSNIEEWQRNAYYKTQDEYIAAIGEAMREEYKAIVEAGFLLQIDDPRLVSYYLVKPDASIAECRRWANQRVELLNHALRGIPTEKIRHHTCYGINMGPRVHDMEVKHLLDIILKIRAGAYSFEASNPRHEHEWKIWGSAKLPKGAILIPGVISHSTVLVEHPELVAERIVRFASMVGKENVIAGSDCGFATFAGSKEVHPSIVWAKMKAMTDGARLASKELW 1146
            M RSTDRILTTHAGSLPRPADLL M+ ++  G+P+DEAA   RL GAVK+IV KQVDLG+D+VDDGE+ KPSF+TY NERLGGFE D +     PW  SREA SFP+FY +   H   +  RMVC GPI Y+GHA L+ D+ NLKAA  G  + DVF+PA+SPSN+EEW RN +Y + + Y+ AI EAMREEY+AIV AGFLLQIDDPRLV+YY ++P  S+A+CR WA   VE LN AL GIP EK+RHHTCYGINMGPR+HDME+K ++DI+L++ AGA+SFEA+NPRHEHEW++W   KLP   ILIPGVI+ STVLVEHPELVA+RI+RFA + G++ VIAG+DCGFATFAGS EV   +VWAK +A+  GA +AS+ LW
Sbjct:    1 MQRSTDRILTTHAGSLPRPADLLAMIYSRMNGEPLDEAAFQERLRGAVKDIVRKQVDLGLDVVDDGEFGKPSFMTYVNERLGGFEPDPDAPQGSPWATSREARSFPDFYLKETAHAAAKHRRMVCRGPIRYRGHAALKTDLDNLKAAVAGHDVADVFVPAVSPSNVEEWNRNQHYDSDEAYLFAIAEAMREEYRAIVAAGFLLQIDDPRLVTYYTLEPGLSLADCRTWAALHVEALNFALEGIPREKVRHHTCYGINMGPRIHDMELKDIIDILLRVNAGAFSFEAANPRHEHEWQVWKDVKLPADTILIPGVITQSTVLVEHPELVAQRILRFAEVAGRDRVIAGADCGFATFAGSNEVPEPVVWAKFEALVKGAAIASEHLW 384          
BLAST of mRNA_P-wetherbeei_contig16136.1.1 vs. uniprot
Match: A0A2V6V0T3_9BACT (Methionine synthase n=3 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6V0T3_9BACT)

HSP 1 Score: 522 bits (1344), Expect = 1.020e-182
Identity = 246/385 (63.90%), Postives = 308/385 (80.00%), Query Frame = 1
Query:    1 MNRSTDRILTTHAGSLPRPADLLDMLQAKEQGKPVDEAARAARLPGAVKEIVDKQVDLGIDIVDDGEYSKPSFVTYTNERLGGFEIDTEHRHRGPWVGSREALSFPEFYAQL---HVGQRQDRMVCTGPITYKGHAILQRDIANLKAATKGKKIKDVFMPAISPSNIEEWQRNAYYKTQDEYIAAIGEAMREEYKAIVEAGFLLQIDDPRLVSYYLVKPDASIAECRRWANQRVELLNHALRGIPTEKIRHHTCYGINMGPRVHDMEVKHLLDIILKIRAGAYSFEASNPRHEHEWKIWGSAKLPKGAILIPGVISHSTVLVEHPELVAERIVRFASMVGKENVIAGSDCGFATFAGSKEVHPSIVWAKMKAMTDGARLASKELW 1146
            M RS +RILTTHAGSLPRPADLL+M+QA   G+P D  A A R+  AV EIV +Q++LG+D++DDGE  KPSFVTY  ERL GFE         PW GS+E ++FPEFYA         R  R  CTGPI Y+G A ++ DI NLKAA  G   ++ F+PAISPSN+E  Q N+YYKT +EY+ AI +AMREEY AIV+AG L+QIDDPRLV+YY++ P +++ ECRRWA  RVE LNHALRG+P +++R HTCYGINMGPRVHDME+K ++DI+LK+RAGAYSFEA+NPRHEHEW++W   KLP+GA+LIPGVI+ ST+LVEHPELVAERIV+FA +VG+ENVIAGSDCGFATFAGS E+HPS+VWAK+KA+++GAR+A+++LW
Sbjct:    1 MRRSRERILTTHAGSLPRPADLLEMVQALADGRPYDRDAYARRVKAAVSEIVGRQIELGVDVIDDGEMGKPSFVTYVTERLSGFEPSANAAELLPWSGSKEYVAFPEFYAATAAQSANARARRFACTGPIAYRGQAQVRADIENLKAALAGGGAEEAFIPAISPSNVEGRQENSYYKTDEEYLFAIADAMREEYTAIVDAGLLVQIDDPRLVTYYIMDPRSTVDECRRWAEVRVEALNHALRGLPRDRVRFHTCYGINMGPRVHDMELKDVVDIMLKVRAGAYSFEAANPRHEHEWRVWEGVKLPEGALLIPGVITQSTILVEHPELVAERIVKFAKVVGRENVIAGSDCGFATFAGSTEIHPSVVWAKLKALSEGARIATRQLW 385          
BLAST of mRNA_P-wetherbeei_contig16136.1.1 vs. uniprot
Match: A0A2V6YUM7_9BACT (Methionine synthase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6YUM7_9BACT)

HSP 1 Score: 521 bits (1342), Expect = 2.130e-182
Identity = 251/387 (64.86%), Postives = 307/387 (79.33%), Query Frame = 1
Query:    1 MNRSTDRILTTHAGSLPRPADLLDMLQAKEQGKPVDEAARAARLPGAVKEIVDKQVDLGIDIVDDGEYSKPSFVTYTNERLGGFEIDTEHRHRGPWVGSREALSFPEFY-----AQLHVGQRQDRMVCTGPITYKGHAILQRDIANLKAATKGKKIKDVFMPAISPSNIEEWQRNAYYKTQDEYIAAIGEAMREEYKAIVEAGFLLQIDDPRLVSYYLVKPDASIAECRRWANQRVELLNHALRGIPTEKIRHHTCYGINMGPRVHDMEVKHLLDIILKIRAGAYSFEASNPRHEHEWKIWGSAKLPKGAILIPGVISHSTVLVEHPELVAERIVRFASMVGKENVIAGSDCGFATFAGSKEVHPSIVWAKMKAMTDGARLASKELW 1146
            M+RSTDR LTTHAGSLPRP DLL+++QAK  G+P D+ A AAR+  AV EIV KQ +LG+D+VDDGE  KP F+ Y NERL GFE D   R   PW GSRE  +FPEFY     A      R   MVCTGPI Y G   +Q DI NLKA+  G   ++ F+PAISP++IE+WQRNAYYKT++EY+AAI EAM EEYKAIV+AGFL+QIDDP L ++Y+ +P+ S+ + RRWA  RVE LNHALRG+P ++IR HTCYGIN+GPRVHD+E+KH +D+ILKIRAGAYSFEA+NPRHEHEW++W   KLP+GAILIPG I+ STVLVEHPELVA+RI RFA +VG+ENVIAG+DCGFATFAGS E+HPS+VWAK  A+ +GARLA+++LW
Sbjct:    1 MHRSTDRFLTTHAGSLPRPGDLLELIQAKATGRPYDQEAFAARVRQAVGEIVGKQTELGVDVVDDGEMGKPGFIPYVNERLSGFEPDPAGRV-SPWSGSREVRAFPEFYEWFSRAMPSPAVRSLHMVCTGPIVYTGAKHVQTDIENLKASLAGSGAREAFIPAISPTSIEDWQRNAYYKTEEEYLAAIAEAMHEEYKAIVDAGFLVQIDDPHLATHYVSRPELSVDQVRRWAEVRVEALNHALRGLPRDRIRWHTCYGINIGPRVHDLELKHFVDVILKIRAGAYSFEAANPRHEHEWRVWEQVKLPEGAILIPGTITQSTVLVEHPELVADRIGRFARVVGRENVIAGADCGFATFAGSTEIHPSVVWAKFAALVEGARLATRQLW 386          
BLAST of mRNA_P-wetherbeei_contig16136.1.1 vs. uniprot
Match: A0A127EUZ0_9HYPH (Vitamin-B12 independent methionine synthase n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EUZ0_9HYPH)

HSP 1 Score: 521 bits (1341), Expect = 2.620e-182
Identity = 249/386 (64.51%), Postives = 309/386 (80.05%), Query Frame = 1
Query:    1 MNRSTDRILTTHAGSLPRPADLLDMLQAKEQGKPVDEAARAARLPGAVKEIVDKQVDLGIDIVDDGEYSKPSFVTYTNERLGGFEIDTEHRHR-GPWVGSREALSFPEFYAQLHVGQ---RQDRMVCTGPITYKGHAILQRDIANLKAATKGKKIKDVFMPAISPSNIEEWQRNAYYKTQDEYIAAIGEAMREEYKAIVEAGFLLQIDDPRLVSYYLVKPDASIAECRRWANQRVELLNHALRGIPTEKIRHHTCYGINMGPRVHDMEVKHLLDIILKIRAGAYSFEASNPRHEHEWKIWGSAKLPKGAILIPGVISHSTVLVEHPELVAERIVRFASMVGKENVIAGSDCGFATFAGSKEVHPSIVWAKMKAMTDGARLASKELW 1146
            M RSTDRILTTHAGSLPRPADLL M++AK +G+PVDE   A+R+  AV EIV +QVD G+D++DDGE+ KPSFVTY  ERLGG E    H HR   W+ SREA+SFP++Y Q        +Q +M CT P+TYKG A L+ ++  LK+A KG    +VF+P ISP+NIE+W  N YY + DEY+ AI +AM  EYK IV+AGFL+Q+DDPRLVSYYL+ P  S+ + R+WA++RVE LNHALRGIPTEKIR+HTCY INMGPR+HD+EVKH++DI+++IRAGA+SFEASNPRHEHEW +W  AKLPK  +LIPGVI++S+VLVEHPELVA+RI+RFA  +G+ENVIAG+DCGFA+FAGS EVH SIVWAKM AM  GA +ASK+LW
Sbjct:    1 MRRSTDRILTTHAGSLPRPADLLQMVRAKARGEPVDEPKLASRIKEAVTEIVHQQVDAGLDVIDDGEFGKPSFVTYIRERLGGLE---PHGHRPNAWLSSREAISFPDYYKQQESASPRAKQVQMACTSPLTYKGQAALKAELETLKSALKGVNAAEVFVPCISPANIEDWNENRYYASNDEYLLAIADAMNVEYKTIVDAGFLVQVDDPRLVSYYLMDPKMSVDDIRKWASKRVEALNHALRGIPTEKIRYHTCYSINMGPRIHDLEVKHIIDILMQIRAGAFSFEASNPRHEHEWAVWKEAKLPKDTVLIPGVITNSSVLVEHPELVAQRILRFAEFMGRENVIAGTDCGFASFAGSDEVHASIVWAKMDAMVQGAEIASKKLW 383          
BLAST of mRNA_P-wetherbeei_contig16136.1.1 vs. uniprot
Match: A0A6L5FLF6_9HYPH (Methionine synthase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FLF6_9HYPH)

HSP 1 Score: 520 bits (1338), Expect = 6.980e-182
Identity = 248/382 (64.92%), Postives = 303/382 (79.32%), Query Frame = 1
Query:    1 MNRSTDRILTTHAGSLPRPADLLDMLQAKEQGKPVDEAARAARLPGAVKEIVDKQVDLGIDIVDDGEYSKPSFVTYTNERLGGFEIDTEHRHRGPWVGSREALSFPEFYAQLHVGQRQDRMVCTGPITYKGHAILQRDIANLKAATKGKKIKDVFMPAISPSNIEEWQRNAYYKTQDEYIAAIGEAMREEYKAIVEAGFLLQIDDPRLVSYYLVKPDASIAECRRWANQRVELLNHALRGIPTEKIRHHTCYGINMGPRVHDMEVKHLLDIILKIRAGAYSFEASNPRHEHEWKIWGSAKLPKGAILIPGVISHSTVLVEHPELVAERIVRFASMVGKENVIAGSDCGFATFAGSKEVHPSIVWAKMKAMTDGARLASKELW 1146
            M RS+DRILTTHAGSLPRPAD+L+ L AK Q    DE   A RL  AV EIV KQVDLG+DIVDDGE  K  F+ Y NERL GFE+DT      PW  SREA SFPEFYA  H     +RMVCTGPI+YKG   LQRDI NLKAA K  K+++ FMP++SP+++ +W RNA+YK+ ++Y+ A+ +AM +EYK I +AGFL+QIDDP LV+ ++ +P  SI ECR+ A  +V+ LNHALRGI  EK+RHHTCYGIN+GPR+HD+E+KHL+DIIL I A AYSFEASNPRHEHEW++W + KLP G I+IPGVISHSTV+VEHPELVA+R+ RFA + G+ENVIAGSDCGFATFA SKE+HPSIVWAK +A++DGAR+ASK+LW
Sbjct:    1 MKRSSDRILTTHAGSLPRPADILEKLAAKAQAA-FDEPGTAERLRKAVVEIVRKQVDLGVDIVDDGEQGKVGFIPYINERLAGFELDTTRLAVSPWAHSREARSFPEFYAPTHAAAAPNRMVCTGPISYKGQKPLQRDIDNLKAALKAAKVEEAFMPSVSPTSVADWHRNAHYKSYEDYLFAVADAMHQEYKTITDAGFLVQIDDPHLVTQWITEPYESIDECRKAAQMQVDALNHALRGIAPEKVRHHTCYGINIGPRIHDLELKHLVDIILTINAQAYSFEASNPRHEHEWQVWETVKLPDGKIVIPGVISHSTVVVEHPELVAQRLTRFAGVCGRENVIAGSDCGFATFAASKEIHPSIVWAKFQALSDGARIASKQLW 381          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16136.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A127EW01_9HYPH2.840e-20974.35Vitamin-B12 independent methionine synthase n=1 Ta... [more]
A0A537SS84_9PROT2.570e-20170.94Cobalamin-independent methionine synthase II famil... [more]
A0A1Q7BKZ6_9PROT7.930e-20070.42Meth_synt_2 domain-containing protein n=1 Tax=Alph... [more]
A0A1F2RBJ7_9BACT2.420e-18867.53Methionine synthase n=1 Tax=Acidobacteria bacteriu... [more]
A0A2V6PJY5_9BACT2.610e-18364.08Methionine synthase n=1 Tax=Candidatus Rokubacteri... [more]
A0A363TR82_9BRAD5.650e-18364.58Methionine synthase n=1 Tax=Bradyrhizobiaceae bact... [more]
A0A2V6V0T3_9BACT1.020e-18263.90Methionine synthase n=3 Tax=Candidatus Rokubacteri... [more]
A0A2V6YUM7_9BACT2.130e-18264.86Methionine synthase n=1 Tax=Candidatus Rokubacteri... [more]
A0A127EUZ0_9HYPH2.620e-18264.51Vitamin-B12 independent methionine synthase n=1 Ta... [more]
A0A6L5FLF6_9HYPH6.980e-18264.92Methionine synthase n=1 Tax=Hyphomicrobiales bacte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16136contigP-wetherbeei_contig16136:68..1291 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog675635.Psed_2533
Model size1224
Max annot lvl201174|Actinobacteria
KEGG rclassRC00035,RC00113,RC01241
KEGG koko:K00549
KEGG ReactionR04405,R09365
KEGG Pathwayko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230
KEGG ModuleM00017
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.42e-131
EggNOG OGsCOG0620@1|root,COG0620@2|Bacteria,2H8H4@201174|Actinobacteria,4E8PX@85010|Pseudonocardiales
EC2.1.1.14
DescriptionMethionine synthase
Cds size1224
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186078.0923886-CDS-P-wetherbeei_contig16136:67..12911683186078.0923886-CDS-P-wetherbeei_contig16136:67..1291Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16136 68..1291 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16136.1.1prot_P-wetherbeei_contig16136.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16136 68..1291 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16136.1.1

>prot_P-wetherbeei_contig16136.1.1 ID=prot_P-wetherbeei_contig16136.1.1|Name=mRNA_P-wetherbeei_contig16136.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=408bp
MNRSTDRILTTHAGSLPRPADLLDMLQAKEQGKPVDEAARAARLPGAVKE
IVDKQVDLGIDIVDDGEYSKPSFVTYTNERLGGFEIDTEHRHRGPWVGSR
EALSFPEFYAQLHVGQRQDRMVCTGPITYKGHAILQRDIANLKAATKGKK
IKDVFMPAISPSNIEEWQRNAYYKTQDEYIAAIGEAMREEYKAIVEAGFL
LQIDDPRLVSYYLVKPDASIAECRRWANQRVELLNHALRGIPTEKIRHHT
CYGINMGPRVHDMEVKHLLDIILKIRAGAYSFEASNPRHEHEWKIWGSAK
LPKGAILIPGVISHSTVLVEHPELVAERIVRFASMVGKENVIAGSDCGFA
TFAGSKEVHPSIVWAKMKAMTDGARLASKELWKKAVKKTAQKKKAAPKRA
KTRSTRR*
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mRNA from alignment at P-wetherbeei_contig16136:68..1291+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16136.1.1 ID=mRNA_P-wetherbeei_contig16136.1.1|Name=mRNA_P-wetherbeei_contig16136.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1224bp|location=Sequence derived from alignment at P-wetherbeei_contig16136:68..1291+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAACCGCAGCACCGACCGCATCCTAACCACACACGCGGGCTCGCTGCC GCGTCCCGCCGACCTGCTCGACATGCTTCAGGCCAAGGAGCAGGGCAAAC CGGTCGACGAGGCGGCGCGCGCCGCGCGTCTGCCGGGTGCGGTCAAGGAG ATCGTCGACAAGCAGGTCGATCTCGGTATCGACATCGTCGACGACGGCGA ATACTCCAAGCCGAGTTTCGTCACCTACACCAACGAGCGACTCGGCGGCT TCGAGATCGACACGGAGCATCGCCACCGCGGTCCCTGGGTCGGTTCGCGC GAGGCGCTGTCGTTCCCCGAGTTCTACGCCCAGCTTCACGTCGGCCAGCG GCAGGATCGCATGGTCTGCACCGGCCCTATCACCTACAAGGGCCACGCCA TCCTGCAGCGCGACATCGCCAATCTCAAAGCCGCGACCAAGGGCAAAAAG ATCAAAGATGTATTCATGCCGGCGATCTCGCCCTCCAACATCGAGGAGTG GCAGCGCAACGCCTATTACAAGACGCAGGACGAATATATCGCAGCCATCG GCGAGGCGATGCGCGAGGAATACAAGGCCATCGTCGAAGCCGGATTTCTT CTCCAGATCGACGATCCGCGCCTCGTCTCCTATTACCTGGTCAAACCGGA CGCGAGCATCGCGGAATGCCGCCGATGGGCGAACCAGCGCGTCGAATTGC TCAACCATGCACTGCGTGGCATCCCGACCGAGAAAATCCGGCACCACACC TGCTACGGCATCAACATGGGGCCGCGCGTCCACGATATGGAGGTCAAGCA CCTCCTCGACATCATCCTGAAAATCCGCGCTGGCGCCTATTCGTTCGAGG CGTCAAACCCGCGGCACGAGCACGAATGGAAAATCTGGGGAAGCGCAAAG CTGCCGAAGGGCGCCATTCTGATCCCAGGCGTGATCAGCCATTCGACCGT GCTGGTGGAGCATCCAGAGCTCGTGGCCGAGCGCATCGTGCGTTTCGCGT CGATGGTCGGAAAGGAAAACGTGATCGCCGGCTCCGACTGCGGCTTCGCG ACCTTCGCCGGATCGAAGGAAGTTCATCCGAGCATCGTGTGGGCGAAGAT GAAGGCGATGACGGATGGGGCAAGACTGGCCAGCAAGGAGCTGTGGAAGA AGGCGGTAAAGAAAACAGCTCAAAAAAAGAAGGCGGCTCCGAAGCGCGCG AAAACCCGCTCAACCCGCCGGTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16136:68..1291+

>mRNA_P-wetherbeei_contig16136.1.1 ID=mRNA_P-wetherbeei_contig16136.1.1|Name=mRNA_P-wetherbeei_contig16136.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1224bp|location=Sequence derived from alignment at P-wetherbeei_contig16136:68..1291+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAACCGCAGCACCGACCGCATCCTAACCACACACGCGGGCTCGCTGCC
GCGTCCCGCCGACCTGCTCGACATGCTTCAGGCCAAGGAGCAGGGCAAAC
CGGTCGACGAGGCGGCGCGCGCCGCGCGTCTGCCGGGTGCGGTCAAGGAG
ATCGTCGACAAGCAGGTCGATCTCGGTATCGACATCGTCGACGACGGCGA
ATACTCCAAGCCGAGTTTCGTCACCTACACCAACGAGCGACTCGGCGGCT
TCGAGATCGACACGGAGCATCGCCACCGCGGTCCCTGGGTCGGTTCGCGC
GAGGCGCTGTCGTTCCCCGAGTTCTACGCCCAGCTTCACGTCGGCCAGCG
GCAGGATCGCATGGTCTGCACCGGCCCTATCACCTACAAGGGCCACGCCA
TCCTGCAGCGCGACATCGCCAATCTCAAAGCCGCGACCAAGGGCAAAAAG
ATCAAAGATGTATTCATGCCGGCGATCTCGCCCTCCAACATCGAGGAGTG
GCAGCGCAACGCCTATTACAAGACGCAGGACGAATATATCGCAGCCATCG
GCGAGGCGATGCGCGAGGAATACAAGGCCATCGTCGAAGCCGGATTTCTT
CTCCAGATCGACGATCCGCGCCTCGTCTCCTATTACCTGGTCAAACCGGA
CGCGAGCATCGCGGAATGCCGCCGATGGGCGAACCAGCGCGTCGAATTGC
TCAACCATGCACTGCGTGGCATCCCGACCGAGAAAATCCGGCACCACACC
TGCTACGGCATCAACATGGGGCCGCGCGTCCACGATATGGAGGTCAAGCA
CCTCCTCGACATCATCCTGAAAATCCGCGCTGGCGCCTATTCGTTCGAGG
CGTCAAACCCGCGGCACGAGCACGAATGGAAAATCTGGGGAAGCGCAAAG
CTGCCGAAGGGCGCCATTCTGATCCCAGGCGTGATCAGCCATTCGACCGT
GCTGGTGGAGCATCCAGAGCTCGTGGCCGAGCGCATCGTGCGTTTCGCGT
CGATGGTCGGAAAGGAAAACGTGATCGCCGGCTCCGACTGCGGCTTCGCG
ACCTTCGCCGGATCGAAGGAAGTTCATCCGAGCATCGTGTGGGCGAAGAT
GAAGGCGATGACGGATGGGGCAAGACTGGCCAGCAAGGAGCTGTGGAAGA
AGGCGGTAAAGAAAACAGCTCAAAAAAAGAAGGCGGCTCCGAAGCGCGCG
AAAACCCGCTCAACCCGCCGGTAA
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