mRNA_P-wetherbeei_contig16099.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16099.1.1 vs. uniprot
Match: A0A3A3HDZ9_9HYPH (Nuclear transport factor 2 family protein n=1 Tax=Mesorhizobium sp. DCY119 TaxID=2108445 RepID=A0A3A3HDZ9_9HYPH) HSP 1 Score: 144 bits (364), Expect = 3.820e-41 Identity = 78/160 (48.75%), Postives = 99/160 (61.88%), Query Frame = 1
Query: 1 RGAAMDAIETLLAIEAIKQLKARYFYTLDTKQWHDYGALFTADAVIDFSSQQALMQQVGSLGAVAADG----AWRCIGGAALAAWIAPLLGDVASVHHGHDPQITLTGSDSATGIWAMYDRLETSLDVFHGYGHYHESYRRVDGQWFFASLTLTRLKGAW 468
RG+A+D I L AIE IK LK+RYF +D K WH +FT DA +DFS + VG G V D +W +GG A IA +G++ +VH GHDPQI D ATG W++YDRLE +V HG+GHY E YRR+DG+W +SLTLTR+K W
Sbjct: 13 RGSALDPIARLEAIEEIKLLKSRYFQAVDFKDWHGIVDIFTDDARVDFSGEP--QHHVGHHG-VTEDSIDPDSWVVVGGPETAKVIAGAVGEIVAVHQGHDPQIHAHSQDYATGRWSLYDRLEYGNEVMHGFGHYQEEYRRIDGKWRISSLTLTRIKVVW 169
BLAST of mRNA_P-wetherbeei_contig16099.1.1 vs. uniprot
Match: A0A2A3EWM5_9NOCA (SnoaL-like domain-containing protein n=4 Tax=Actinomycetia TaxID=1760 RepID=A0A2A3EWM5_9NOCA) HSP 1 Score: 141 bits (356), Expect = 2.850e-40 Identity = 75/149 (50.34%), Postives = 92/149 (61.74%), Query Frame = 1
Query: 31 LLAIEAIKQLKARYFYTLDTKQWHDYGALFTADAVIDFSSQQALMQQVGSLGAVAAD---GAWRCIGGAALAAWIAPLLGDVASVHHGHDPQITLTGSDSATGIWAMYDRLETSLDVFHGYGHYHESYRRVDGQWFFASLTLTRLKGAW 468
+ AIE I+QLK+RYF +D K W ALFT DA +DF + +G G AAD W GG A A IA + +V SVH GHDPQI L + A G W+MYDRL+ +V HGYGHYHE Y RVDG+W F++LTLTRL+ W
Sbjct: 1 MCAIEEIRQLKSRYFQVVDEKDWAGIEALFTPDARVDFGGEG--QHHIGHHGVTAADINPDDWIVSGGKATARVIAGAVSEVISVHQGHDPQIELISPNRAVGRWSMYDRLDYGDEVMHGYGHYHEKYERVDGEWKFSALTLTRLRVVW 147
BLAST of mRNA_P-wetherbeei_contig16099.1.1 vs. uniprot
Match: UPI0019807541 (Nuclear transport factor 2 family protein n=2 Tax=Rhodococcus sp. R79 TaxID=2811421 RepID=UPI0019807541) HSP 1 Score: 142 bits (359), Expect = 3.100e-40 Identity = 79/152 (51.97%), Postives = 93/152 (61.18%), Query Frame = 1
Query: 22 IETLLAIEAIKQLKARYFYTLDTKQWHDYGALFTADAVIDFSSQQALMQQVGSLGAVAAD---GAWRCIGGAALAAWIAPLLGDVASVHHGHDPQITLTGSDSATGIWAMYDRLETSLDVFHGYGHYHESYRRVDGQWFFASLTLTRLKGAW 468
+E L AIE I+ LK+RYF +D K W +FTADA +DF + +G G AAD GGA A IA + V SVHHGHDPQI LTG D A G W+MYD LE + +V HGYGHYHE Y RVD QW FA+LTLTRL+ W
Sbjct: 35 LEKLCAIEDIRHLKSRYFQAVDEKDWAAIEDMFTADAQVDFGGEG--QYHIGHHGVTAADIEPADGVVTGGAETARVIAGAVSQVISVHHGHDPQIELTGPDEAVGRWSMYDCLEYADEVMHGYGHYHERYTRVDNQWKFAALTLTRLRVNW 184
BLAST of mRNA_P-wetherbeei_contig16099.1.1 vs. uniprot
Match: UPI001FF4929B (nuclear transport factor 2 family protein n=1 Tax=unclassified Agrobacterium TaxID=2632611 RepID=UPI001FF4929B) HSP 1 Score: 136 bits (343), Expect = 5.740e-38 Identity = 73/153 (47.71%), Postives = 93/153 (60.78%), Query Frame = 1
Query: 19 AIETLLAIEAIKQLKARYFYTLDTKQWHDYGALFTADAVIDFSSQQALMQQVGSLGAVAA---DGAWRCIGGAALAAWIAPLLGDVASVHHGHDPQITLTGSDSATGIWAMYDRLETSLDVFHGYGHYHESYRRVDGQWFFASLTLTRLKGAW 468
A+ L A E IK LK+RYF +D K W +FT DA +DFS + +G G AA W +GG A A IA +G+V +VH GHDPQI + ++ ATG W +YDRLE ++ HGYGHY E YRRVDGQW ++LTLTRL+ W
Sbjct: 19 ALMRLEAAEDIKVLKSRYFQAVDFKDWPSIVEMFTDDARVDFSGE--CKHHIGHHGVTAAGINSDDWVVVGGRATAEVIAGAVGEVIAVHQGHDPQIRILSAERATGRWTLYDRLEYPDEIMHGYGHYEEEYRRVDGQWRISALTLTRLRVVW 169
BLAST of mRNA_P-wetherbeei_contig16099.1.1 vs. uniprot
Match: A0A8F8NG89_9HYPH (Nuclear transport factor 2 family protein n=2 Tax=Rhizobium/Agrobacterium group TaxID=227290 RepID=A0A8F8NG89_9HYPH) HSP 1 Score: 135 bits (340), Expect = 1.290e-37 Identity = 74/159 (46.54%), Postives = 96/159 (60.38%), Query Frame = 1
Query: 7 AAMDAIETLLAIEAIKQLKARYFYTLDTKQWHDYGALFTADAVIDFSSQQALMQQVGSLGAV-----AADGAWRCIGGAALAAWIAPLLGDVASVHHGHDPQITLTGSDSATGIWAMYDRLETSLDVFHGYGHYHESYRRVDGQWFFASLTLTRLKGAW 468
A +D + L+AIE I+QLK+RYF +DTK W +FT DA +DFS + VG G AD W IGG A A I +G + +VH GHDPQI + ++A+G W +YDRL+ +V HGYGHY E YR VDG+W A+LTLTR+ AW
Sbjct: 11 AGVDTLARLVAIEDIRQLKSRYFSAVDTKDWQAIARIFTEDAKVDFSGE--CQYHVGHHGVTDESINPAD--WVVIGGKATAEVIEGAVGGIIAVHQGHDPQIQIDTVETASGRWTLYDRLDYGPEVMHGYGHYDEKYRLVDGEWRIAALTLTRICVAW 165
BLAST of mRNA_P-wetherbeei_contig16099.1.1 vs. uniprot
Match: A0A7Y6E3M3_9ACTN (Nuclear transport factor 2 family protein n=1 Tax=Streptomycetaceae bacterium TaxID=2021369 RepID=A0A7Y6E3M3_9ACTN) HSP 1 Score: 132 bits (333), Expect = 8.200e-37 Identity = 73/153 (47.71%), Postives = 93/153 (60.78%), Query Frame = 1
Query: 13 MDAIETLLAIEAIKQLKARYFYTLDTKQWHDYGALFTADAVIDFSSQQALMQQVGSLGAVAADGAWRCIGGAALAAWIAPLLGDVASVHHGHDPQITLTGSDSATGIWAMYDRLE----TSLDVFHGYGHYHESYRRVDGQWFFASLTLTRLK 459
MDA E LLAIE IKQLKARYF +DTK W + A+F DA +D S + + G G A+AA++ + V +VHHGH P+IT+ D+A+GIWAM D+L +S HGYGHYHE+YRRVDGQW +L LTRL+
Sbjct: 1 MDAAERLLAIEEIKQLKARYFRCMDTKDWDGFAAVFAPDADMDVSGEVPHDPESGLRH-----------GNTAIAAFVRSNVDPVVTVHHGHMPEITVHDEDTASGIWAMEDKLRWPDGSSFRTLHGYGHYHETYRRVDGQWRIQTLRLTRLR 142
BLAST of mRNA_P-wetherbeei_contig16099.1.1 vs. uniprot
Match: A0A260QUZ8_9NOCA (Nuclear transport factor 2 family protein n=2 Tax=Rhodococcus sp. 15-649-1-2 TaxID=2023141 RepID=A0A260QUZ8_9NOCA) HSP 1 Score: 132 bits (332), Expect = 2.490e-36 Identity = 73/156 (46.79%), Postives = 94/156 (60.26%), Query Frame = 1
Query: 7 AAMDAIETLLAIEAIKQLKARYFYTLDTKQWHDYGALFTADAVIDFSSQQALMQQVGSLGAVAADGA--WRCIGGAALAAWIAPLLGDVASVHHGHDPQITLTGSDSATGIWAMYDRLETSLDVFHGYGHYHESYRRVDGQWFFASLTLTRLKGAW 468
A +D ++ L+AIEAI+ LK+RYF +D K W LFT DA +DF + VG G A + W +GGAA A IA + V SVH GHDPQI + ++ A G W+MYDRLE +V HGYGHY E+Y R + W F+SL LTRL+ W
Sbjct: 18 ATVDPLDRLVAIEAIRLLKSRYFQAVDEKTWSTIAELFTDDARVDFGGEG--QYHVGHHGVTAEANSEEWVVVGGAAAARVIAGAVSKVISVHQGHDPQIEIISANHAAGRWSMYDRLEYENEVMHGYGHYIETYARDETGWKFSSLLLTRLRVVW 171
BLAST of mRNA_P-wetherbeei_contig16099.1.1 vs. uniprot
Match: U2YL89_9HYPH (Putative dehydratase n=1 Tax=Caenibius tardaugens NBRC 16725 TaxID=1219035 RepID=U2YL89_9HYPH) HSP 1 Score: 125 bits (315), Expect = 4.360e-34 Identity = 71/155 (45.81%), Postives = 90/155 (58.06%), Query Frame = 1
Query: 13 MDAIETLLAIEAIKQLKARYFYTLDTKQWHDYGALFTADAVIDFSSQQALMQQVGSLGAVAADGAWRCIGGAALAAWIAPLLGDVASVHHGHDPQITLTGSDSATGIWAMYDRL---ETS---LDVFHGYGHYHESYRRVDGQWFFASLTLTRLK 459
MD++E L AI AI LKARYF+T+DTK W A+F D V DF D + G A A +AP+L DV +VHHGH P+IT+ SDSA G+WAM D+L ETS + HGYGHYHE Y R+ G+W A + L+RL+
Sbjct: 1 MDSLERLEAIAAITALKARYFHTMDTKDWAGLEAVFAPDLVADFRDATETH-----------DPSQLTHGAAPYVAKLAPILQDVVTVHHGHTPEITIESSDSARGVWAMEDKLWPRETSQLPFRMLHGYGHYHERYIRIGGEWRIAEIRLSRLR 144
BLAST of mRNA_P-wetherbeei_contig16099.1.1 vs. uniprot
Match: UPI000B3C8DE5 (nuclear transport factor 2 family protein n=2 Tax=Sphingomonadaceae TaxID=41297 RepID=UPI000B3C8DE5) HSP 1 Score: 124 bits (311), Expect = 1.810e-33 Identity = 67/151 (44.37%), Postives = 89/151 (58.94%), Query Frame = 1
Query: 16 DAIETLLAIEAIKQLKARYFYTLDTKQWHDYGALFTADAVIDFSSQQALMQQVGSLGAVAADGAWRCIGGAALAAWIAPLLGDVASVHHGHDPQITLTGSDSATGIWAMYDRLETSLDV----FHGYGHYHESYRRVDGQWFFASLTLTRL 456
DA+E LLAIE IK+LKARYF +DTK W + +FT DA D G+LG +G +A+ +++ +G + S H+GH P+I + DSATGIWA+ D L F+GYGHYHESYRRV+G W ASL ++RL
Sbjct: 3 DAVEILLAIEEIKRLKARYFRLMDTKDWDGFSEIFTEDATFDVR---------GALGENPGPDQEPIVGRSAIVDYVSSGIGPITSAHYGHMPEIEILSEDSATGIWALADILRMPAGAPFARFYGYGHYHESYRRVEGAWKIASLRISRL 144
BLAST of mRNA_P-wetherbeei_contig16099.1.1 vs. uniprot
Match: UPI0008302957 (nuclear transport factor 2 family protein n=1 Tax=Novosphingobium rosa TaxID=76978 RepID=UPI0008302957) HSP 1 Score: 123 bits (308), Expect = 6.860e-33 Identity = 70/155 (45.16%), Postives = 94/155 (60.65%), Query Frame = 1
Query: 13 MDAIETLLAIEAIKQLKARYFYTLDTKQWHDYGALFTADAVIDFSSQQALMQQVGSLGAVAADGAWRCIGGAALAAWIAPLLGDVASVHHGHDPQITLTGSDSATGIWAMYDRL----ETSLDVFHGYGHYHESYRRVDGQWFFASLTLTRLKGA 465
M A++ LLA EAI+ LKARYF +DTK W+ +F DA D++ GA A+G G AA+ A+I+ L + SVH G P+IT+TG D+A+ IW M DRL ++ + HGYGHYHE+YR+V GQW A+L LTRL+ A
Sbjct: 1 MTALDDLLATEAIRLLKARYFRAMDTKDWNLLADVFCEDAFCDYTQAMTDPATPPPSGAAQAEGEHLLQGRAAIIAYISAGLTPLRSVHQGFMPEITVTGPDTASAIWPMADRLTLPPDSPVAEIHGYGHYHETYRKVAGQWKIATLRLTRLRVA 155 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16099.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16099.1.1 >prot_P-wetherbeei_contig16099.1.1 ID=prot_P-wetherbeei_contig16099.1.1|Name=mRNA_P-wetherbeei_contig16099.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=152bp MDAIETLLAIEAIKQLKARYFYTLDTKQWHDYGALFTADAVIDFSSQQALback to top mRNA from alignment at P-wetherbeei_contig16099:95..562+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16099.1.1 ID=mRNA_P-wetherbeei_contig16099.1.1|Name=mRNA_P-wetherbeei_contig16099.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=468bp|location=Sequence derived from alignment at P-wetherbeei_contig16099:95..562+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16099:95..562+ >mRNA_P-wetherbeei_contig16099.1.1 ID=mRNA_P-wetherbeei_contig16099.1.1|Name=mRNA_P-wetherbeei_contig16099.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=456bp|location=Sequence derived from alignment at P-wetherbeei_contig16099:95..562+ (Phaeothamnion wetherbeei SAG_119_79)back to top |