mRNA_P-wetherbeei_contig16088.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16088.3.1 vs. uniprot
Match: A0A127EZK8_9HYPH (Uncharacterized protein n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EZK8_9HYPH) HSP 1 Score: 198 bits (503), Expect = 6.370e-58 Identity = 108/218 (49.54%), Postives = 143/218 (65.60%), Query Frame = 1
Query: 1 MGGTIDLLEIALKIPPWEPMRLLSREELRGMNIVTAD---EAPEAGPVTAASAYALASGTRAGLPERTWVTAEKSGQLTLSRKHPLTVEGDEIGTFELSFACGEAGKDFTVTYVEQRRNAGDKPRAPEALTDVEISLSGKSVPLKIVSSEPM-----GKTMERASIASGRVSADLFKAFADTRHRSLMVETTNEDTATAIRIGNVGVSRSFGQLASSC 630
MGG++DLLEIALKIPPWEPMR LSR+ELR M + T AGP T ++ AL+SG RA + R W + L R HPLTVEG+++GTF+L+FAC E G+D VTY EQRR +G K P A+T+V++S+ G+SVPLK+VSS G A++A+GRV D+ ++FAD RSL VET + D +T IR+GN G+SR L++ C
Sbjct: 198 MGGSVDLLEIALKIPPWEPMRQLSRDELRSMKMTTTSGDSSDTNAGPTT--NSVALSSGARATVNSRAWAMLAGDSRPALGRSHPLTVEGEDLGTFDLAFACSEQGRDVMVTYTEQRRASGGK--TPSAVTEVDLSIVGRSVPLKVVSSRAADRAQGGGAAGLATLATGRVPLDVLQSFADRNGRSLTVETVSNDASTVIRVGNAGISRVLPSLSTGC 411
BLAST of mRNA_P-wetherbeei_contig16088.3.1 vs. uniprot
Match: UPI0010BF28AE (hypothetical protein n=1 Tax=Pseudolabrys sp. FHR47 TaxID=2562284 RepID=UPI0010BF28AE) HSP 1 Score: 156 bits (394), Expect = 1.010e-41 Identity = 91/215 (42.33%), Postives = 131/215 (60.93%), Query Frame = 1
Query: 1 MGGTIDLLEIALKIPPWEPMRLLSREELRGMNIVTADEAPE----AGPVTAASAYALASGTRAG-LPERTWVTAEKSGQLTLSRKHPLTVEGDEIGTFELSFACGEAGKDFTVTYVEQRRNAGDKPRAPEALTDVEISLSGKSVPLKIVSSEPMGKTMERASIASGRVSADLFKAFADTRHRSLMVETTNEDTATAIRIGNVGVSRSFGQLASSC 630
MG +IDLL++AL+IPPWEP+ +++R+E+ M + T D AP A PV A+ G A + ER W ++ L+R+HPLTVEGD IG+F+L +CG GK F ++YVE RR P+ L +V + + + LK+VSSE + E S+A G V DL + FA+ R RS++VETT++ T IRIGN G ++F +LAS+C
Sbjct: 212 MGASIDLLDLALRIPPWEPLHVMTRQEIVAMRLATEDVAPAPVAAAPPVARPHRPAITEGVAATPISERGWALLDRDSGAVLARRHPLTVEGDRIGSFDLMLSCGADGK-FDLSYVE-RRTGSTAVAVPQRLDNVRVRVGRAAAALKVVSSERKDELSELRSLAIGGVPDDLVRGFAEGR-RSVVVETTSDGMVTVIRIGNTGAPQNFPRLASAC 423
BLAST of mRNA_P-wetherbeei_contig16088.3.1 vs. uniprot
Match: A0A1W6ZWX0_9HYPH (Uncharacterized protein n=1 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZWX0_9HYPH) HSP 1 Score: 153 bits (387), Expect = 8.690e-41 Identity = 94/241 (39.00%), Postives = 137/241 (56.85%), Query Frame = 1
Query: 1 MGGTIDLLEIALKIPPWEPMRLLSREELRGMNIVTADEAPEAGPVTAASAYALASGTRAGLP--------------ERTWVTAEKSGQLTLSRKHPLTVEGDEIGTFELSFACGEAGKDFTVTYVEQRRNAGDKPRAPEALTDVEISLSGKSVPLKIVSSEPMGKTMERASIASGRVSADLFKAFADTRHRSLMVETTNE-DTATAIRIGNVGVSRSFGQLASSCGGSTTVVRSDAARNEP 678
MGG+++LLEI+L+IPPWEPMR L+R+ELR M++ T+D A +A A + + +G P R W E+SG TL+R+HPLT+EG+++G+ +++FACG D V Y E RR + D P L VE+ LSGK VP+ + S ER S AS + + ++FA RS+ VET +E D A+ IRIGN G +++ Q ++C RS+ AR +P
Sbjct: 198 MGGSVELLEISLRIPPWEPMRSLTRDELRRMSLDTSD-ATDARSAPADTTSTITPSPSSGGPLKRIALRPAKESDRARGWTMIERSGSSTLTRRHPLTIEGEDLGSLDITFACGTTAGDVMVLYTENRRGSADAQAKP--LKSVELRLSGKIVPMALGLSRETETAGERMSAASAVIPVSVLRSFASGSARSITVETASETDEASVIRIGNTGAAQNVPQFLTAC---AKTDRSEHARLQP 432
BLAST of mRNA_P-wetherbeei_contig16088.3.1 vs. uniprot
Match: A0A327KT67_9HYPH (Uncharacterized protein n=1 Tax=Rhodoplanes roseus TaxID=29409 RepID=A0A327KT67_9HYPH) HSP 1 Score: 150 bits (379), Expect = 1.010e-39 Identity = 90/213 (42.25%), Postives = 131/213 (61.50%), Query Frame = 1
Query: 1 MGGTIDLLEIALKIPPWEPMRLLSREELRGMNIVTADEAPEAGPVTAASAYALASGTR--AGLPERTWVTAEKSGQLTLSRKHPLTVEGDEIGTFELSFACGEAGKDFTVTYVEQRRNAGDKPRAPEALTDVEISLSGKSVPLKIVSSEPMGKTMERASIASGRVSADLFKAFADTRHRSLMVETT-NEDTATAIRIGNVGVSRSFGQLASSC 630
+GG +L+EIAL+IPPWEPMR+L+R+ELR + + AP AG T+A+ +A+ A ER W E L L R+HPLTVEG+ IG+F+LSF CG+A + +TYVE+R+ G + P AL V + + + +I+SS G+ +E SIA V A L +A+A RS+ V+T + AT+IRIGN G+ ++ GQL ++C
Sbjct: 196 LGGGAELIEIALRIPPWEPMRMLTRDELRRTGL-DREAAPVAGLQTSAAVTPVAAAIERNAAQGERGWAAVEGGSGLMLVRRHPLTVEGERIGSFDLSFGCGDAPGTYALTYVERRQETG-RATEPAALDQVRLWIEQTDLKFQILSSRSDGRQVE--SIAVATVPAPLVRAYAAMATRSISVQTAAGGEPATSIRIGNAGIGKALGQLETAC 404
BLAST of mRNA_P-wetherbeei_contig16088.3.1 vs. uniprot
Match: A0A363TG58_9BRAD (Uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TG58_9BRAD) HSP 1 Score: 146 bits (369), Expect = 1.840e-38 Identity = 88/214 (41.12%), Postives = 127/214 (59.35%), Query Frame = 1
Query: 1 MGGTIDLLEIALKIPPWEPMRLLSREELRGMNIVTAD---EAPEAGPVTAASAYALASGTRAGLPERTWVTAEKSGQLTLSRKHPLTVEGDEIGTFELSFACGEAGKDFTVTYVEQRRNAGDKPRAPEALTDVEISLSGKSVPLKIVSSEPMGKTMERASIASGRVSADLFKAFADTRHRSLMVETTNEDTA-TAIRIGNVGVSRSFGQLASSC 630
MGG ++LLE ALKIPPWEP+RLL+R+ELR + T D E P P T S + A G A + E W AEK ++R+HPLTVEG++IG+F++ ACG+ + + V+Y E+R +P L V + + + L++VSSE K+ E ++A G+V A + KA ++ RS+ V T D + T IR+GN GV +S LA+SC
Sbjct: 179 MGGGMELLETALKIPPWEPLRLLTRDELRRAQLHTVDHLFEQPTPQPTTT-SLLSEAGGRAAAISENGWALAEKGAGRMMARRHPLTVEGEQIGSFDVMVACGDGAERYLVSYSEKRFGGRQRP-----LKLVAVQIGSEQAILRVVSSERAAKSSELVTLARGQVPARMIKALTESG-RSVTVTTKAADRSETVIRLGNTGVGKSLPDLAASC 385
BLAST of mRNA_P-wetherbeei_contig16088.3.1 vs. uniprot
Match: UPI0018579CCE (Uncharacterized protein n=1 Tax=Rhodoplanes sp. TaxID=1968906 RepID=UPI0018579CCE) HSP 1 Score: 144 bits (364), Expect = 1.620e-37 Identity = 93/228 (40.79%), Postives = 127/228 (55.70%), Query Frame = 1
Query: 1 MGGTIDLLEIALKIPPWEPMRLLSREELRGMNIVTADEAPEAGPVTAASA--YALASGTRAGLPERTWVTAEKSGQLTLSRKHPLTVEGDEIGTFELSFACGEAGKDFTVTYVEQRRNAGDKPRAPEALTDVEISLSGKSVPLKIVSSEPMGKTMERASIASGRVSADLFKAFADTRHRSLMVETTNEDT-ATAIRIGNVGVSRSFGQLASSCGGSTTVVRSDAARNE 675
MGG +L+EIAL+IPPWEPMRLL+REELR + + P A T+A+ A+ + A ER W E L R+HPLTVEG+ IG+F+LS CG+ + +TY E RR + P AL V + + V +I+SS G+ +E ++A+ V A L +AFA RS+ V+T AT+IRIGN G+ + FG+L CG T R AR E
Sbjct: 197 MGGAAELIEIALRIPPWEPMRLLTREELRRTRL-DMEPTPVATRQTSAAVTPVAMTADRNAAASERGWSAVEGGSGTMLVRRHPLTVEGERIGSFDLSLTCGDTAGTYALTYTE-RRQSSPTGTEPVALDQVRLWIEQTDVTFEILSSRGDGRQIETVAVAT--VPAPLVRAFASAATRSISVQTAAGGVPATSIRIGNAGIGKVFGRLEGGCGDRTKPNRDAHARLE 420
BLAST of mRNA_P-wetherbeei_contig16088.3.1 vs. uniprot
Match: A0A371BCN9_9HYPH (Uncharacterized protein n=2 Tax=Pseudolabrys sp. GY_H TaxID=2292256 RepID=A0A371BCN9_9HYPH) HSP 1 Score: 144 bits (364), Expect = 2.130e-37 Identity = 89/218 (40.83%), Postives = 130/218 (59.63%), Query Frame = 1
Query: 1 MGGTIDLLEIALKIPPWEPMRLLSREELRGMNIVTADEAPEAGPVTAASAY-------ALASGTRAG-LPERTWVTAEKSGQLTLSRKHPLTVEGDEIGTFELSFACGEAGKDFTVTYVEQRRNAGDKPRAPEALTDVEISLSGKSVPLKIVSSEPMGKTMERASIASGRVSADLFKAFADTRHRSLMVETTNEDTATAIRIGNVGVSRSFGQLASSC 630
MG +IDLL++AL+IPPWEP+ ++SR+E+ M + T D PV AA + AL G A + ER W + L+R+HPLT++GD IG+F+L +CG GK F ++YVE RR + P+ L +V + + + LK+VSS+ + E S+A G V +L + FA+ R RSL+VETT+ T IRIGN G ++F +LAS+C
Sbjct: 205 MGASIDLLDLALRIPPWEPLHVMSRQEIVAMRLATEDLTT--APVAAAPSAGVRPQRPALTEGAAATPISERGWALLNRDEGAALARRHPLTLKGDRIGSFDLLLSCGADGK-FDMSYVE-RRTGSEAIAIPKQLENVRLRVGRTAATLKVVSSDRKDQASELRSLAMGMVPDELVRGFAEGR-RSLVVETTSGGMVTMIRIGNTGAPQNFPRLASAC 417
BLAST of mRNA_P-wetherbeei_contig16088.3.1 vs. uniprot
Match: A0A6L5FGS1_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FGS1_9HYPH) HSP 1 Score: 144 bits (362), Expect = 3.820e-37 Identity = 90/231 (38.96%), Postives = 130/231 (56.28%), Query Frame = 1
Query: 1 MGGTIDLLEIALKIPPWEPMRLLSREELRGMNIVTADEAPEAGP----------VTAA-------SAYALASGTRAG--LPERTWVTAEKSGQLTLSRKHPLTVEGDEIGTFELSFACGEAGKDFTVTYVEQRRNAGDKPRAPEALTDVEISLSGKSVPLKIVSSEPMGKTMERASIASGRVSADLFKAFADTRHRSLMVETTN-EDTATAIRIGNVGVSRSFGQLASSCG 633
MG ++D LE++L+IPPWEPMR L+R+E+R M + EAGP VTAA S+ + GTR G R W+ +SGQ + R HPLT+EG E+G+FE++ ACGE V Y E RR A + P + V +S+ +S PL++ SEP+ ++ E +S A G V A F++ +R+L+V T + D T IR+GN G+ +F +L SCG
Sbjct: 198 MGASVDFLELSLRIPPWEPMRALNRDEIRRMQV-------EAGPQLIPPSVAAGVTAAXXXXXXXSSPTVIGGTRRGHDASARGWIVDRRSGQRVIVRSHPLTIEGVELGSFEITLACGETAGSVQVDYSE-RRLAANASAIP--VRTVTLSVGAQSEPLQVTRSEPLPRSFEVSSRARGSVPASFIGYFSEAGNRALLVSTVSANDARTTIRVGNSGIGPAFARLQESCG 418
BLAST of mRNA_P-wetherbeei_contig16088.3.1 vs. uniprot
Match: A0A345ZRD5_9HYPH (Uncharacterized protein n=2 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A345ZRD5_9HYPH) HSP 1 Score: 143 bits (360), Expect = 4.340e-37 Identity = 85/221 (38.46%), Postives = 128/221 (57.92%), Query Frame = 1
Query: 1 MGGTIDLLEIALKIPPWEPMRLLSREELRGMNIVTADEAPEAGPVTAASAYA--------LASGTRAGL---PERTWVTAEKSGQLTLSRKHPLTVEGDEIGTFELSFACGEAGKDFTVTYVEQRRNAGDKPRAPEALTDVEISLSGKSVPLKIVSSEPMGKTMERASIASGRVSADLFKAFADTRHRSLMVETTNEDTATAIRIGNVGVSRSFGQLASSC 630
MG +ID+L+++L+IPPWEPM ++ +ELR M + T G AA+ A L +G +A + ER W ++SG +L+R+HPLTVEG+EIG+F+L +CG + +Y+E RR G + AP+A+ V + + G S PLK+VSS+ + E + A+ +V ADL AF +RS+ +ET T IR+GN G +S L S+C
Sbjct: 165 MGISIDMLDLSLRIPPWEPMHAMTSDELRTMRVATEQPDIATGAAVAANPPAPIAPPVSRLTNGIQAAMIDISERNWAVVDQSGHSSLARRHPLTVEGEEIGSFDLLVSCGADRGRYDFSYIE-RRYKGARNAAPDAVGAVTVRVGGLSEPLKVVSSDQ--RDGEMVTYAAAQVPADLIDAFTSLGNRSMTLETRASGLVTTIRLGNTGARQSLPGLISAC 382
BLAST of mRNA_P-wetherbeei_contig16088.3.1 vs. uniprot
Match: A0A327JVL3_9HYPH (Uncharacterized protein n=2 Tax=Rhodoplanes piscinae TaxID=444923 RepID=A0A327JVL3_9HYPH) HSP 1 Score: 139 bits (349), Expect = 3.690e-35 Identity = 88/217 (40.55%), Postives = 119/217 (54.84%), Query Frame = 1
Query: 1 MGGTIDLLEIALKIPPWEPMRLLSREELRGMNIVTADEAPEAGPVTAASA----YALASGTRAGLPERTWVTAEKSGQLTLSRKHPLTVEGDEIGTFELSFACGEAGKDFTVTYVEQRR-NAGDKPRAPEALTDVEISLSGKSVPLKIVSSEPMGKTMERASIASGRVSADLFKAFADTRHRSLMVETTNED-TATAIRIGNVGVSRSFGQLASSCG 633
MGG +L+EIAL+IPPWEPMRLLSR+ELR + + P A T ASA A++ A ER W E L R+HPLTVEG+ IG+F++ +CG+A + +TY E+R+ A A+ V + + V L I+SS ++A V A L +AFA RSL V+T AT+IRIGN G+ + FGQL + CG
Sbjct: 192 MGGAAELIEIALRIPPWEPMRLLSRDELRRTGL-DREAPPPAVAATQASAAVTPVAVSMDRAAAASERGWSVVEGGSGTMLVRRHPLTVEGERIGSFDVGLSCGDAPGTYALTYAERRQVTAAGSAGQAAAIDQVRLWIEQTDVKLDILSSSRRADGQPIETVAVATVPAPLVRAFATAAARSLSVQTAAGGLAATSIRIGNAGIGKVFGQLETGCG 407 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16088.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16088.3.1 >prot_P-wetherbeei_contig16088.3.1 ID=prot_P-wetherbeei_contig16088.3.1|Name=mRNA_P-wetherbeei_contig16088.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=226bp MGGTIDLLEIALKIPPWEPMRLLSREELRGMNIVTADEAPEAGPVTAASAback to top mRNA from alignment at P-wetherbeei_contig16088:873..1550- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16088.3.1 ID=mRNA_P-wetherbeei_contig16088.3.1|Name=mRNA_P-wetherbeei_contig16088.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=678bp|location=Sequence derived from alignment at P-wetherbeei_contig16088:873..1550- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16088:873..1550- >mRNA_P-wetherbeei_contig16088.3.1 ID=mRNA_P-wetherbeei_contig16088.3.1|Name=mRNA_P-wetherbeei_contig16088.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=678bp|location=Sequence derived from alignment at P-wetherbeei_contig16088:873..1550- (Phaeothamnion wetherbeei SAG_119_79)back to top |