mRNA_P-wetherbeei_contig16064.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16064.1.1
Unique NamemRNA_P-wetherbeei_contig16064.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16064.1.1 vs. uniprot
Match: A0A353LNS8_9PROT (Acyl-CoA dehydrogenase n=5 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LNS8_9PROT)

HSP 1 Score: 600 bits (1546), Expect = 6.540e-211
Identity = 304/396 (76.77%), Postives = 341/396 (86.11%), Query Frame = 1
Query:   28 LIENPIATCAAALPAAEALLLAAREAVRALLSEKGQVSADLLEQNQFQAHGLAWLATYVESLREMQGWAARLQAEGRFGEMEALILQAAFGEYLSQMAGGIPMNQGEVVRPQDMGVSEPQQKAFYSDAVNALIRNGNSAAVRDRIAQLIAENSGAVTFGDTGLDETHSMIRDQFHRFAEEQVAPFAHDWHMKNDLIPIEVINQMGELGVFGLTIPEQLGGLGLGKMAMCVVSEELSRGYIGVGSLGTRSEIAAELIMGSGTDAQKAYYLPKLASAEILPTAVFTEPNTGSDLATLRTRAVKDGDVYKITGNKTWITHASRTDMMTLLVRTNPNETGYKGLSMFLAEKPRGTEDNLFPARGMTGGEIEVLGYRGMKEYELAFDGFEVPAKNLLGEKE 1215
            LI++ +ATC AALP  +AL  AAR+ VRA+L   G++S  LLEQNQF AHG  WLATYVE LR+M  WA RL  EGR GE E LILQA FGEYL+QMAGGIPM+QGEV+RP DMG+S    +AF +  V  LI  GN+A VR RIA LI EN GA+T GDTGLDETH+MIR+QFHRFAEEQVAP+AH+WH+K++LIPIEVI QMGELGVFGLTIPEQLGGLG+GKMAMCVVSEELSRGYIGVGSLGTRSEIAAELIMG GTDAQK +YLPK+ASAEILPTAVFTEPNTGSDLA+LRTRA++DGDVYK+TGNKTWITHA+RTD+MTLL RT+PNE GYKGLSMFLAEKPRG++   FPA GMTGGEIEVLGYRGMKEYEL FD FEV AKNLLGE+E
Sbjct:    7 LIDDLVATCRAALPQIDALYAAARDGVRAVLVADGKISPALLEQNQFSAHGFGWLATYVECLRQMVEWADRLSDEGRLGEFEMLILQAGFGEYLAQMAGGIPMSQGEVLRPADMGISAEAVQAFQAGPVARLIAGGNTAPVRQRIADLIGENPGAITQGDTGLDETHAMIREQFHRFAEEQVAPYAHEWHLKDELIPIEVITQMGELGVFGLTIPEQLGGLGMGKMAMCVVSEELSRGYIGVGSLGTRSEIAAELIMGGGTDAQKEHYLPKIASAEILPTAVFTEPNTGSDLASLRTRAIRDGDVYKVTGNKTWITHAARTDVMTLLARTDPNEPGYKGLSMFLAEKPRGSDAEPFPADGMTGGEIEVLGYRGMKEYELGFDEFEVSAKNLLGEQE 402          
BLAST of mRNA_P-wetherbeei_contig16064.1.1 vs. uniprot
Match: A0A2E5BN35_9HYPH (Acyl-CoA dehydrogenase n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2E5BN35_9HYPH)

HSP 1 Score: 531 bits (1367), Expect = 1.180e-183
Identity = 271/397 (68.26%), Postives = 321/397 (80.86%), Query Frame = 1
Query:   25 ILIENPIATCAAALPAAEALLLAAREAVRALLSEKGQVSADLLEQNQFQAHGLAWLATYVESLREMQGWAARLQAEGRFGEMEALILQAAFGEYLSQMAGGIPMNQGEVVRPQDMGVSEPQQKAFYSDAVNALIRNGNSAAVRDRIAQLIAENSGAVTFGDTGLDETHSMIRDQFHRFAEEQVAPFAHDWHMKNDLIPIEVINQMGELGVFGLTIPEQLGGLGLGKMAMCVVSEELSRGYIGVGSLGTRSEIAAELIMGSGTDAQKAYYLPKLASAEILPTAVFTEPNTGSDLATLRTRAVKDGDVYKITGNKTWITHASRTDMMTLLVRTNPNETGYKGLSMFLAEKPRGTEDNLFPARGMTGGEIEVLGYRGMKEYELAFDGFEVPAKNLLGEKE 1215
            +L++N     A A+ AA+ LL  A  AVR L+S   +VSA  LE+ QF AHGLAW ATYVE+LR++  +AAR+  EGR GE+EAL++QAAFGEYL Q+ GGIPM+QGE++RPQDMG+S+  Q+     AV  L + GNSAAVR RI ++I E +GA T+GD GLDET + IRDQ  RFA+EQV PFAHDWH+KND IP+EV+ QM ELGVFGLTIPE+ GGLGLGK +MCVVSEELSRGYIGVGSLGTRSEIAAELI+G GT  QKA++LPK+AS EILPTAVFTEPNTGSDLA+LRTR   DGDVYK+TGNKTWITHA+R D+MTLL RT+ +E GYKGLSM LAEKPRG + N FPA GMTGGEIEVLGYRGMKE+E+ FD FEV  +NLLG +E
Sbjct:   11 LLLDNLTGLTADAVAAADTLLARASHAVRELVSVDDKVSAARLEEEQFAAHGLAWFATYVEALRQLHAYAARMSEEGRLGEIEALLVQAAFGEYLWQLYGGIPMSQGEILRPQDMGLSQDDQRXLMVSAVQTLTQQGNSAAVRXRIVEIITEQAGAATYGDAGLDETLNAIRDQMRRFADEQVTPFAHDWHLKNDYIPLEVLQQMAELGVFGLTIPEEFGGLGLGKESMCVVSEELSRGYIGVGSLGTRSEIAAELILGGGTPEQKAHWLPKIASGEILPTAVFTEPNTGSDLASLRTRGRLDGDVYKVTGNKTWITHAARADVMTLLCRTS-DEPGYKGLSMLLAEKPRGDDANPFPAEGMTGGEIEVLGYRGMKEFEIGFDXFEVKKENLLGGQE 406          
BLAST of mRNA_P-wetherbeei_contig16064.1.1 vs. uniprot
Match: A0A6C1SPQ6_9PROT (Acyl-CoA dehydrogenase n=2 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6C1SPQ6_9PROT)

HSP 1 Score: 530 bits (1365), Expect = 2.530e-183
Identity = 269/399 (67.42%), Postives = 324/399 (81.20%), Query Frame = 1
Query:   19 TAILIENPIATCAAALPAAEALLLAAREAVRALLSEKGQVSADLLEQNQFQAHGLAWLATYVESLREMQGWAARLQAEGRFGEMEALILQAAFGEYLSQMAGGIPMNQGEVVRPQDMGVSEPQQKAFYSDAVNALIRNGNSAAVRDRIAQLIAENSGAVTFGDTGLDETHSMIRDQFHRFAEEQVAPFAHDWHMKNDLIPIEVINQMGELGVFGLTIPEQLGGLGLGKMAMCVVSEELSRGYIGVGSLGTRSEIAAELIMGSGTDAQKAYYLPKLASAEILPTAVFTEPNTGSDLATLRTRAVKDGDVYKITGNKTWITHASRTDMMTLLVRTNPNETGYKGLSMFLAEKPRGTEDNLFPARGMTGGEIEVLGYRGMKEYELAFDGFEVPAKNLLGEKE 1215
            T I++ + I TC  AL AA+ LL+  R+ V  ++   G++ ADL++Q QF AHG AWLATYV +LR M  WA RL+ E + GE+EAL LQ+AFGEYL+QM GGIPM+Q EVVRP DMGVS+    AF+  AV  L+++GN+ AVR RIA LIA+      FG+ GL+ET  MIRDQF R++EE+V PFAH WH +++LIP+E+I +M ELGVFGLTIPE+ GGLG+ K AMCVV+EELSR YIGVGSLGTRSEIAAELI   GTD QKA++LPKLAS +ILPTAVFTEPNTGSDL +LRTRAV+DGDVY++TGNKTWITHA+RTD+MTLLVRT+PNE GYKGLSMFLAEKPRGT++N FPA+GMTGGEIEVLGYRGMKEYE+ FD FEV A+NLLG  E
Sbjct:   14 TQIVVPDLIPTCVEALSAAQHLLVEVRKEVSQMVVRNGRIQADLVDQQQFAAHGYAWLATYVAALRAMLAWAERLEGESKLGELEALYLQSAFGEYLNQMIGGIPMSQVEVVRPADMGVSDDAIHAFFVPAVATLVKHGNNNAVRMRIAALIADRQ----FGNLGLEETDEMIRDQFRRWSEEKVLPFAHGWHERDELIPMEIIQEMAELGVFGLTIPEEFGGLGMSKQAMCVVTEELSRAYIGVGSLGTRSEIAAELIRLGGTDDQKAHFLPKLASGDILPTAVFTEPNTGSDLGSLRTRAVRDGDVYRVTGNKTWITHAARTDLMTLLVRTDPNEKGYKGLSMFLAEKPRGTDENPFPAQGMTGGEIEVLGYRGMKEYEIGFDAFEVSAENLLGRAE 408          
BLAST of mRNA_P-wetherbeei_contig16064.1.1 vs. uniprot
Match: A0A6N6VJW3_9HYPH (Acyl-CoA dehydrogenase n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VJW3_9HYPH)

HSP 1 Score: 527 bits (1358), Expect = 2.820e-182
Identity = 266/404 (65.84%), Postives = 331/404 (81.93%), Query Frame = 1
Query:    4 AMSSATAILIENPIATCAAALPAAEALLLAAREAVRALLSEKGQVSADLLEQNQFQAHGLAWLATYVESLREMQGWAARLQAEGRFGEMEALILQAAFGEYLSQMAGGIPMNQGEVVRPQDMGVSEPQQKAFYSDAVNALIRNGNSAAVRDRIAQLIAENSGAVTFGDTGLDETHSMIRDQFHRFAEEQVAPFAHDWHMKNDLIPIEVINQMGELGVFGLTIPEQLGGLGLGKMAMCVVSEELSRGYIGVGSLGTRSEIAAELIMGSGTDAQKAYYLPKLASAEILPTAVFTEPNTGSDLATLRTRAVKDGDVYKITGNKTWITHASRTDMMTLLVRTNPNETGYKGLSMFLAEKPRGTEDNLFPARGMTGGEIEVLGYRGMKEYELAFDGFEVPAKNLLGEKE 1215
            A ++A A+++ N +   A+A  +AE LL  A+ AV   +S  G++SA L+E+ QF AHGL+W+ATYVE LR++  +AAR+  EGRFGE+EALI+Q AFGEYLSQ++GGIPM+QGE+VRPQD+G+S+    AF++  V ALI  GN+A VR R+A+LIAEN GA +FGD GL++T+  IRDQ  RFA+ +V P+AHDWH+K++ IP+EVI +M ELGVFGLTIPE+ GGLGLGK +MCVVSEELSRGYIGVGSLGTRSEIAAELI+G GT  QKA +LPK+AS EILPTAVFTEPNTGSDLA+LRTR  +DGDVY++TGNKTWITHA+R D+MTLL RT+ +  GYKGLSM LAEKPRG + N FPA+GMTGGEI VLGYRGMKE+E+ FD FEV A+NLLG +E
Sbjct:    5 AETAAKALVLGNLLPLAASAATSAETLLAKAKAAVALKVSHDGKISAALIEREQFAAHGLSWMATYVEGLRQLAAYAARMTEEGRFGEIEALIVQVAFGEYLSQLSGGIPMSQGEIVRPQDLGISDTDHAAFHTADVRALIAQGNTAQVRARLAKLIAENVGAASFGDAGLEDTYEQIRDQMRRFADAEVVPYAHDWHLKDEYIPLEVIAKMAELGVFGLTIPEEFGGLGLGKESMCVVSEELSRGYIGVGSLGTRSEIAAELILGGGTPEQKAKWLPKIASGEILPTAVFTEPNTGSDLASLRTRGKRDGDVYRVTGNKTWITHAARADVMTLLCRTS-DAPGYKGLSMLLAEKPRGDDANPFPAKGMTGGEIRVLGYRGMKEFEIGFDDFEVKAENLLGGEE 407          
BLAST of mRNA_P-wetherbeei_contig16064.1.1 vs. uniprot
Match: A0A1M7TE80_9RHOB ((2S)-methylsuccinyl-CoA dehydrogenase n=2 Tax=Oceanicella actignis TaxID=1189325 RepID=A0A1M7TE80_9RHOB)

HSP 1 Score: 522 bits (1344), Expect = 4.570e-180
Identity = 266/384 (69.27%), Postives = 316/384 (82.29%), Query Frame = 1
Query:   55 AAALPAAEALLLAAREAVRALLSEKGQVSADLLEQNQFQAHGLAWLATYVESLREMQGWAARLQAEGRFGEMEALILQAAFGEYLSQMAGGIPMNQGEVVRPQDMGVSEPQQKAFYSDAVNALIRNGNSAAVRDRIAQLIAENSGAVTFGDTGLDETHSMIRDQFHRFAEEQVAPFAHDWHMKNDLIPIEVINQMGELGVFGLTIPEQLGGLGLGKMAMCVVSEELSRGYIGVGSLGTRSEIAAELIMGSGTDAQKAYYLPKLASAEILPTAVFTEPNTGSDLATLRTRAVKDGDVYKITGNKTWITHASRTDMMTLLVRTNPNETGYKGLSMFLAEKPRGTEDNLFPARGMTGGEIEVLGYRGMKEYELAFDGFEVPAKNLLG 1206
            AAALPAA+A L AAR+A+ A ++ +G+ SA LLEQ+QF AHGL+W ATYVESLREM  WA RL+AEGR GE+E LILQ AFGEYLSQ+ GGIPM+QGE+VR QD+G  +  ++A  ++AV  L  +G S A R R+ +L+    GA TFG TGLDE   MIRDQF RFA+E+VAPFAH+WH+K++LIP+E+I +MG LGVFGLTIPE+ GG G+GK AMCVVSEELSRGYIGVGSLGTRSEIAAELI+  GT  QKA +LP++ASAEILPTAVFTEPNTGSDL +LRTRAV++GD Y +TG KTWITHA+R D+MTLL RT+PN   Y GLSMFLAEKPRGT+++ FPA GMTGGEI VLGYRGMKEYEL FDGF V A+NLLG
Sbjct:   27 AAALPAAQAALDAARKALAARVAPQGRPSAALLEQDQFAAHGLSWFATYVESLREMLDWARRLEAEGRLGEIEKLILQIAFGEYLSQIHGGIPMSQGEIVRLQDLGADQQIRRALMTEAVERLTAHGASDAARRRLVELMVAQDGAATFGATGLDEEFEMIRDQFRRFADEKVAPFAHEWHLKDELIPLELIEEMGALGVFGLTIPEEYGGSGMGKTAMCVVSEELSRGYIGVGSLGTRSEIAAELILCGGTPEQKAKWLPRIASAEILPTAVFTEPNTGSDLGSLRTRAVREGDEYVVTGAKTWITHAARADVMTLLARTDPNTDNYAGLSMFLAEKPRGTDEDPFPAPGMTGGEIPVLGYRGMKEYELGFDGFRVKAENLLG 410          
BLAST of mRNA_P-wetherbeei_contig16064.1.1 vs. uniprot
Match: A0A2Z4UM70_9HYPH ((2S)-methylsuccinyl-CoA dehydrogenase n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2Z4UM70_9HYPH)

HSP 1 Score: 521 bits (1343), Expect = 5.120e-180
Identity = 267/394 (67.77%), Postives = 317/394 (80.46%), Query Frame = 1
Query:   25 ILIENPIATCAAALPAAEALLLAAREAVRALLSEKGQVSADLLEQNQFQAHGLAWLATYVESLREMQGWAARLQAEGRFGEMEALILQAAFGEYLSQMAGGIPMNQGEVVRPQDMGVSEPQQKAFYSDAVNALIRNGNSAAVRDRIAQLIAENSGAVTFGDTGLDETHSMIRDQFHRFAEEQVAPFAHDWHMKNDLIPIEVINQMGELGVFGLTIPEQLGGLGLGKMAMCVVSEELSRGYIGVGSLGTRSEIAAELIMGSGTDAQKAYYLPKLASAEILPTAVFTEPNTGSDLATLRTRAVKDGDVYKITGNKTWITHASRTDMMTLLVRTNPNETGYKGLSMFLAEKPRGTEDNLFPARGMTGGEIEVLGYRGMKEYELAFDGFEVPAKNLLG 1206
            +L++N     A  + AA+ALL  A  AVR  +SE G+V   LLEQ QF  HGLAWLATYVE+LR++  +A R+  EGRFGE+EAL++QAAFGEYL QM GGIPM+QGE++RPQD+G+S+  Q+     AV  L   GN+AAVR RIA LI +++GA T+GD+GLDET + +RDQ  RFAEEQV P AH+WH+KN+ IP++V+ QM ELGVFGLTIPE+ GGLGLGK +MCVVSEELSRGYIGVGSLGTRSEIAAELI+G GTD QK  +LPK+AS EILPTAVFTEPNTGSDLA+LRTR   +GDVYKITGNKTWITHA+R D+MTLL RTN  E GYKGLSM LAEKPRG +   FPA GM+GGEIEVLGYRGMKEYE+ FD FEV ++NLLG
Sbjct:   11 LLLDNLTGLTAEGVGAADALLSRAAAAVREQVSENGKVKPALLEQGQFAGHGLAWLATYVEALRQLHAYAERMTQEGRFGELEALLVQAAFGEYLWQMFGGIPMSQGEILRPQDLGLSQDDQRMLMVPAVQTLCDLGNTAAVRARIADLITQSTGAATYGDSGLDETLTAVRDQMRRFAEEQVTPHAHEWHLKNEYIPLDVLAQMAELGVFGLTIPEEFGGLGLGKESMCVVSEELSRGYIGVGSLGTRSEIAAELILGGGTDEQKNNWLPKIASGEILPTAVFTEPNTGSDLASLRTRGRLEGDVYKITGNKTWITHAARADVMTLLCRTN-EEPGYKGLSMLLAEKPRGNDAEPFPAEGMSGGEIEVLGYRGMKEYEIGFDNFEVKSENLLG 403          
BLAST of mRNA_P-wetherbeei_contig16064.1.1 vs. uniprot
Match: A0A1H3E4C1_9RHOB ((2S)-methylsuccinyl-CoA dehydrogenase n=2 Tax=Rhodobacteraceae TaxID=31989 RepID=A0A1H3E4C1_9RHOB)

HSP 1 Score: 521 bits (1342), Expect = 7.760e-180
Identity = 261/393 (66.41%), Postives = 317/393 (80.66%), Query Frame = 1
Query:   28 LIENPIATCAAALPAAEALLLAAREAVRALLSEKGQVSADLLEQNQFQAHGLAWLATYVESLREMQGWAARLQAEGRFGEMEALILQAAFGEYLSQMAGGIPMNQGEVVRPQDMGVSEPQQKAFYSDAVNALIRNGNSAAVRDRIAQLIAENSGAVTFGDTGLDETHSMIRDQFHRFAEEQVAPFAHDWHMKNDLIPIEVINQMGELGVFGLTIPEQLGGLGLGKMAMCVVSEELSRGYIGVGSLGTRSEIAAELIMGSGTDAQKAYYLPKLASAEILPTAVFTEPNTGSDLATLRTRAVKDGDVYKITGNKTWITHASRTDMMTLLVRTNPNETGYKGLSMFLAEKPRGTEDNLFPARGMTGGEIEVLGYRGMKEYELAFDGFEVPAKNLLG 1206
            L+++  A  AAA PAAE++L++AR A+ A+++  G+VS  LLEQNQ  AH ++W+ATY +SL +MQ W+ RL A G+ GE+E LILQ AF EYL+Q+ GG+ M+Q E  RP D+G++E   +A     V ALI  GN+ A R R+ +L+ E   + TFGD  LDE   MIRDQF RFA+E+VAPFAH+WH+K++LIPIE++N+MGELGVFGLTIPE+ GG G+GK AMCVVSEELSRGYIGVGSLGTRSEIAAELI+ SGT  QK ++LPK+ASAEILPTAVFTEPNTGSDL +LRTRAVKDGDVYK+TGNKTWITHA+R D+MT+LVRT+P  T Y GLSMFLAEKPR TE   FPA GMTGGEIEVLGYRGMKEYEL FDGFE+ A+NLLG
Sbjct:   13 LLDDLTALTAAAAPAAESVLMSARRALSAMVTVDGKVSGALLEQNQRAAHAVSWIATYAQSLTQMQAWSERLSAAGKLGEIEKLILQLAFAEYLAQLQGGVMMSQNEFARPADLGIAEDVAEALGIPEVQALIAGGNTNASRRRLVELMGEQKASSTFGDCALDEEFDMIRDQFRRFADEKVAPFAHEWHLKDELIPIEILNEMGELGVFGLTIPEEFGGFGMGKTAMCVVSEELSRGYIGVGSLGTRSEIAAELIISSGTPEQKDHWLPKIASAEILPTAVFTEPNTGSDLGSLRTRAVKDGDVYKVTGNKTWITHAARADVMTMLVRTDPETTNYSGLSMFLAEKPRMTETEDFPAEGMTGGEIEVLGYRGMKEYELGFDGFEIKAENLLG 405          
BLAST of mRNA_P-wetherbeei_contig16064.1.1 vs. uniprot
Match: A0A2A5EMG6_9HYPH (Acyl-CoA dehydrogenase n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2A5EMG6_9HYPH)

HSP 1 Score: 521 bits (1341), Expect = 1.030e-179
Identity = 265/384 (69.01%), Postives = 312/384 (81.25%), Query Frame = 1
Query:   55 AAALPAAEALLLAAREAVRALLSEKGQVSADLLEQNQFQAHGLAWLATYVESLREMQGWAARLQAEGRFGEMEALILQAAFGEYLSQMAGGIPMNQGEVVRPQDMGVSEPQQKAFYSDAVNALIRNGNSAAVRDRIAQLIAENSGAVTFGDTGLDETHSMIRDQFHRFAEEQVAPFAHDWHMKNDLIPIEVINQMGELGVFGLTIPEQLGGLGLGKMAMCVVSEELSRGYIGVGSLGTRSEIAAELIMGSGTDAQKAYYLPKLASAEILPTAVFTEPNTGSDLATLRTRAVKDGDVYKITGNKTWITHASRTDMMTLLVRTNPNETGYKGLSMFLAEKPRGTEDNLFPARGMTGGEIEVLGYRGMKEYELAFDGFEVPAKNLLG 1206
            A A+ AA+ALL  AR++VRA +S  G+VS  LLEQ+QF AHGLAWLATYVE+LR++  +A R+ AEGRFGE+E L++QAAFGEYL QM GGIPM+QGE+VRPQDMG+S+  Q+     AV  L   GN+A VR RI+ +IAE +GA T+GD GLDET   IRDQ  RF++EQVAPFAH WH+KN+ IP+ V+ QM ELGVFGLTIPE+ GGLGLGK +MCVVSEE SRGYIGVGSLGTRSEIAAELI+G GTDAQKAY+LPK+AS EILPTAVFTEPNTGSDLA+L TRA  +G+ YK+TGNKTWITHA+R DMMTLL RT+ +  GYKGLSM LAEKPRG +   FP  GM G EIEVLGYRGMKE+E+ FD FEV  +NLLG
Sbjct:   21 AEAVAAADALLAQARQSVRARVSADGKVSPALLEQDQFAAHGLAWLATYVEALRQLHAYAHRMNAEGRFGELETLLVQAAFGEYLWQMYGGIPMSQGEIVRPQDMGLSQDDQRQLMVPAVQTLCERGNTAQVRARISAIIAETAGAATYGDCGLDETLGTIRDQMRRFSDEQVAPFAHQWHLKNEYIPLTVLAQMAELGVFGLTIPEEFGGLGLGKESMCVVSEEFSRGYIGVGSLGTRSEIAAELILGGGTDAQKAYWLPKIASGEILPTAVFTEPNTGSDLASLSTRARLEGETYKVTGNKTWITHAARADMMTLLCRTS-DTPGYKGLSMLLAEKPRGDDSEPFPVEGMDGSEIEVLGYRGMKEFEIGFDNFEVKKENLLG 403          
BLAST of mRNA_P-wetherbeei_contig16064.1.1 vs. uniprot
Match: A0A3B8XQI8_9HYPH (Acyl-CoA dehydrogenase n=7 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A3B8XQI8_9HYPH)

HSP 1 Score: 519 bits (1336), Expect = 7.450e-179
Identity = 260/405 (64.20%), Postives = 331/405 (81.73%), Query Frame = 1
Query:    1 SAMSSATAILIENPIATCAAALPAAEALLLAAREAVRALLSEKGQVSADLLEQNQFQAHGLAWLATYVESLREMQGWAARLQAEGRFGEMEALILQAAFGEYLSQMAGGIPMNQGEVVRPQDMGVSEPQQKAFYSDAVNALIRNGNSAAVRDRIAQLIAENSGAVTFGDTGLDETHSMIRDQFHRFAEEQVAPFAHDWHMKNDLIPIEVINQMGELGVFGLTIPEQLGGLGLGKMAMCVVSEELSRGYIGVGSLGTRSEIAAELIMGSGTDAQKAYYLPKLASAEILPTAVFTEPNTGSDLATLRTRAVKDGDVYKITGNKTWITHASRTDMMTLLVRTNPNETGYKGLSMFLAEKPRGTEDNLFPARGMTGGEIEVLGYRGMKEYELAFDGFEVPAKNLLGEKE 1215
            SA +  +A L+++ + +  +A+ AA+AL   A+ AV A +++ G+VSA L+E+ QF  HGLAW ATYVE+LR++  +AAR+  EGRFGE EALI+QAAFGEYLSQ+AGGIPM+QGE VR +D+GV+  + +  ++DAV  L+  GN+A VR R+A+LIA N+GA TFGD GL++T+  IRDQ  +FA+ +V P AH+WH+K+D IP++V+ QM ELGVFGLTIPE+ GGLGLGK +MCVVSEELSRGYIGVGSLGTRSEIAAELI+G GT  QK  +LPK+AS E+LPTAVFTEPNTGSDLA+L+TR  +DGDVYK+ GNKTWITHA+R D+MTLL RTN +E GYKGLSM LAEKPRG +++ FPA+GM+GGEIEVLGYRGMKE+E+ FD FEV A+NLLG +E
Sbjct:   10 SAPTGGSAALLDDLLPSTVSAVEAADALFAKAKAAVFAKVAKDGKVSAALIEKEQFAVHGLAWFATYVEALRQLASYAARMTEEGRFGEFEALIVQAAFGEYLSQIAGGIPMSQGETVRMRDLGVTHDEAQVLFNDAVQKLVMGGNTAPVRARLAELIAANTGAATFGDAGLEDTYEQIRDQMRKFADAEVVPHAHEWHLKDDYIPLDVVAQMSELGVFGLTIPEEFGGLGLGKESMCVVSEELSRGYIGVGSLGTRSEIAAELILGGGTAEQKQKWLPKIASGEVLPTAVFTEPNTGSDLASLKTRGKRDGDVYKVNGNKTWITHAARADVMTLLCRTN-DEPGYKGLSMLLAEKPRGDDNDPFPAKGMSGGEIEVLGYRGMKEFEIGFDDFEVKAENLLGGEE 413          
BLAST of mRNA_P-wetherbeei_contig16064.1.1 vs. uniprot
Match: A0A2W5NFP0_RHOSU (Acyl-CoA dehydrogenase n=2 Tax=Rhodobacteraceae TaxID=31989 RepID=A0A2W5NFP0_RHOSU)

HSP 1 Score: 518 bits (1335), Expect = 9.240e-179
Identity = 262/394 (66.50%), Postives = 314/394 (79.70%), Query Frame = 1
Query:   25 ILIENPIATCAAALPAAEALLLAAREAVRALLSEKGQVSADLLEQNQFQAHGLAWLATYVESLREMQGWAARLQAEGRFGEMEALILQAAFGEYLSQMAGGIPMNQGEVVRPQDMGVSEPQQKAFYSDAVNALIRNGNSAAVRDRIAQLIAENSGAVTFGDTGLDETHSMIRDQFHRFAEEQVAPFAHDWHMKNDLIPIEVINQMGELGVFGLTIPEQLGGLGLGKMAMCVVSEELSRGYIGVGSLGTRSEIAAELIMGSGTDAQKAYYLPKLASAEILPTAVFTEPNTGSDLATLRTRAVKDGDVYKITGNKTWITHASRTDMMTLLVRTNPNETGYKGLSMFLAEKPRGTEDNLFPARGMTGGEIEVLGYRGMKEYELAFDGFEVPAKNLLG 1206
            +L+ +  A CA A+ AAE +L A R A+ A +S  G++S   LE +QF AHGL+W+ATYVESLR+M GWA RL+A G  GE+E+LILQ AFGEYLSQ+ GGIPM+QGEV R  D+GVS+       ++AV  L R GN+ A R R+ QL+ +  GA TFG TGLD+ + M+RD F RFAE++V PFAH+WH++++LIPIE+I +MGELGVFGLTIPE+ GG G+ K AMCVVSEELSRGYIGVGSLGTRSEIAAELI+G GT+ QKA +LPK+ASAEILPTAVFTEPNTGSDL +LRTRAVK GD + +TGNKTWITHA+R D+MTLLVRT+P  T Y GLSM LA K RGTE+  FPA+GMTGGEIEVLGYRGMKEYEL FDGF VP  NLLG
Sbjct:   13 VLLPSLRADCAEAVAAAETVLAAGRAALSARVSTGGKISNKALEADQFAAHGLSWIATYVESLRQMLGWADRLEAAGTLGEIESLILQIAFGEYLSQLKGGIPMSQGEVARIYDLGVSDADAAPLATEAVTRLARRGNTDAARARLVQLMMDGRGAATFGATGLDDEYEMVRDHFRRFAEDKVVPFAHEWHLRDELIPIEIIEEMGELGVFGLTIPEEYGGAGMSKTAMCVVSEELSRGYIGVGSLGTRSEIAAELILGGGTEEQKAEWLPKIASAEILPTAVFTEPNTGSDLGSLRTRAVKQGDDWVVTGNKTWITHAARADVMTLLVRTDPATTDYSGLSMLLAPKTRGTEETPFPAKGMTGGEIEVLGYRGMKEYELGFDGFTVPGANLLG 406          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16064.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A353LNS8_9PROT6.540e-21176.77Acyl-CoA dehydrogenase n=5 Tax=Alphaproteobacteria... [more]
A0A2E5BN35_9HYPH1.180e-18368.26Acyl-CoA dehydrogenase n=1 Tax=Rhodobiaceae bacter... [more]
A0A6C1SPQ6_9PROT2.530e-18367.42Acyl-CoA dehydrogenase n=2 Tax=Rhodospirillales ba... [more]
A0A6N6VJW3_9HYPH2.820e-18265.84Acyl-CoA dehydrogenase n=1 Tax=Parvibaculum sedime... [more]
A0A1M7TE80_9RHOB4.570e-18069.27(2S)-methylsuccinyl-CoA dehydrogenase n=2 Tax=Ocea... [more]
A0A2Z4UM70_9HYPH5.120e-18067.77(2S)-methylsuccinyl-CoA dehydrogenase n=4 Tax=Alph... [more]
A0A1H3E4C1_9RHOB7.760e-18066.41(2S)-methylsuccinyl-CoA dehydrogenase n=2 Tax=Rhod... [more]
A0A2A5EMG6_9HYPH1.030e-17969.01Acyl-CoA dehydrogenase n=1 Tax=Rhodobiaceae bacter... [more]
A0A3B8XQI8_9HYPH7.450e-17964.20Acyl-CoA dehydrogenase n=7 Tax=Alphaproteobacteria... [more]
A0A2W5NFP0_RHOSU9.240e-17966.50Acyl-CoA dehydrogenase n=2 Tax=Rhodobacteraceae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16064contigP-wetherbeei_contig16064:3..1217 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1282876.BAOK01000002_gene628
Preferred namemcd
PFAMsAcyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
Model size1215
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC02483
KEGG koko:K14448
KEGG ReactionR09293
KEGG Pathwayko00630,ko01120,ko01200,map00630,map01120,map01200
KEGG ModuleM00373
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.87e-181
EggNOG OGsCOG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,2TR78@28211|Alphaproteobacteria,4BR91@82117|unclassified Alphaproteobacteria
EC1.3.8.12
DescriptionAcyl-CoA dehydrogenase, C-terminal domain
Cds size1209
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186075.902486-CDS-P-wetherbeei_contig16064:2..12111683186075.902486-CDS-P-wetherbeei_contig16064:2..1211Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16064 3..1211 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186075.9159935-UTR-P-wetherbeei_contig16064:1211..12171683186075.9159935-UTR-P-wetherbeei_contig16064:1211..1217Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig16064 1212..1217 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16064.1.1prot_P-wetherbeei_contig16064.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16064 3..1211 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16064.1.1

>prot_P-wetherbeei_contig16064.1.1 ID=prot_P-wetherbeei_contig16064.1.1|Name=mRNA_P-wetherbeei_contig16064.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=403bp
MSSATAILIENPIATCAAALPAAEALLLAAREAVRALLSEKGQVSADLLE
QNQFQAHGLAWLATYVESLREMQGWAARLQAEGRFGEMEALILQAAFGEY
LSQMAGGIPMNQGEVVRPQDMGVSEPQQKAFYSDAVNALIRNGNSAAVRD
RIAQLIAENSGAVTFGDTGLDETHSMIRDQFHRFAEEQVAPFAHDWHMKN
DLIPIEVINQMGELGVFGLTIPEQLGGLGLGKMAMCVVSEELSRGYIGVG
SLGTRSEIAAELIMGSGTDAQKAYYLPKLASAEILPTAVFTEPNTGSDLA
TLRTRAVKDGDVYKITGNKTWITHASRTDMMTLLVRTNPNETGYKGLSMF
LAEKPRGTEDNLFPARGMTGGEIEVLGYRGMKEYELAFDGFEVPAKNLLG
EKE
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mRNA from alignment at P-wetherbeei_contig16064:3..1217-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16064.1.1 ID=mRNA_P-wetherbeei_contig16064.1.1|Name=mRNA_P-wetherbeei_contig16064.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1215bp|location=Sequence derived from alignment at P-wetherbeei_contig16064:3..1217- (Phaeothamnion wetherbeei SAG_119_79)
TCCGCCATGTCCTCAGCCACCGCCATTTTGATCGAAAACCCTATTGCCAC CTGCGCCGCCGCCCTGCCTGCGGCGGAAGCGCTGCTGCTGGCGGCGCGCG AGGCTGTGCGCGCATTGTTAAGTGAAAAAGGCCAGGTTTCGGCTGATCTG CTGGAGCAGAACCAGTTTCAGGCGCATGGGCTGGCCTGGTTGGCGACCTA TGTGGAAAGCCTGCGCGAAATGCAGGGCTGGGCGGCGCGTTTGCAAGCCG AGGGCCGTTTTGGCGAAATGGAGGCGCTGATCCTGCAAGCCGCATTCGGT GAATATCTGTCGCAGATGGCAGGCGGCATTCCGATGAACCAGGGAGAAGT GGTGCGCCCCCAGGATATGGGCGTCAGCGAGCCGCAGCAAAAAGCTTTTT ACAGTGATGCGGTGAACGCCTTAATCCGCAATGGCAATAGCGCTGCGGTG CGTGACCGCATTGCGCAACTGATTGCGGAAAATAGCGGCGCGGTGACCTT TGGCGATACCGGGCTGGACGAAACCCACAGCATGATCCGTGATCAGTTCC ACCGTTTTGCCGAAGAACAGGTGGCCCCTTTCGCGCATGACTGGCACATG AAAAATGATCTGATCCCCATCGAGGTGATCAACCAGATGGGCGAGCTGGG CGTATTCGGCCTGACCATCCCGGAACAGTTGGGCGGCCTTGGCCTTGGCA AAATGGCGATGTGCGTGGTGTCGGAAGAATTAAGCCGGGGCTATATCGGG GTCGGCTCGCTCGGCACCCGTTCGGAAATCGCCGCCGAGCTGATCATGGG CAGCGGCACCGACGCGCAGAAAGCCTATTATCTGCCGAAGCTCGCCAGTG CGGAAATTCTGCCGACCGCCGTATTCACCGAACCCAATACCGGATCGGAC CTCGCCACGCTGCGCACCCGTGCGGTGAAAGACGGCGATGTCTATAAAAT CACCGGCAACAAGACCTGGATCACCCATGCGTCACGCACCGATATGATGA CCCTGCTGGTGCGCACCAATCCCAACGAGACGGGCTATAAGGGCCTGTCG ATGTTTCTCGCGGAAAAGCCGCGCGGCACAGAGGATAATCTGTTCCCGGC CAGGGGCATGACCGGCGGCGAAATCGAAGTGCTCGGCTATCGCGGCATGA AGGAATATGAGTTGGCCTTTGATGGTTTCGAAGTGCCTGCCAAAAATCTG CTGGGCGAGAAAGAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16064:3..1217-

>mRNA_P-wetherbeei_contig16064.1.1 ID=mRNA_P-wetherbeei_contig16064.1.1|Name=mRNA_P-wetherbeei_contig16064.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1209bp|location=Sequence derived from alignment at P-wetherbeei_contig16064:3..1217- (Phaeothamnion wetherbeei SAG_119_79)
ATGTCCTCAGCCACCGCCATTTTGATCGAAAACCCTATTGCCACCTGCGC
CGCCGCCCTGCCTGCGGCGGAAGCGCTGCTGCTGGCGGCGCGCGAGGCTG
TGCGCGCATTGTTAAGTGAAAAAGGCCAGGTTTCGGCTGATCTGCTGGAG
CAGAACCAGTTTCAGGCGCATGGGCTGGCCTGGTTGGCGACCTATGTGGA
AAGCCTGCGCGAAATGCAGGGCTGGGCGGCGCGTTTGCAAGCCGAGGGCC
GTTTTGGCGAAATGGAGGCGCTGATCCTGCAAGCCGCATTCGGTGAATAT
CTGTCGCAGATGGCAGGCGGCATTCCGATGAACCAGGGAGAAGTGGTGCG
CCCCCAGGATATGGGCGTCAGCGAGCCGCAGCAAAAAGCTTTTTACAGTG
ATGCGGTGAACGCCTTAATCCGCAATGGCAATAGCGCTGCGGTGCGTGAC
CGCATTGCGCAACTGATTGCGGAAAATAGCGGCGCGGTGACCTTTGGCGA
TACCGGGCTGGACGAAACCCACAGCATGATCCGTGATCAGTTCCACCGTT
TTGCCGAAGAACAGGTGGCCCCTTTCGCGCATGACTGGCACATGAAAAAT
GATCTGATCCCCATCGAGGTGATCAACCAGATGGGCGAGCTGGGCGTATT
CGGCCTGACCATCCCGGAACAGTTGGGCGGCCTTGGCCTTGGCAAAATGG
CGATGTGCGTGGTGTCGGAAGAATTAAGCCGGGGCTATATCGGGGTCGGC
TCGCTCGGCACCCGTTCGGAAATCGCCGCCGAGCTGATCATGGGCAGCGG
CACCGACGCGCAGAAAGCCTATTATCTGCCGAAGCTCGCCAGTGCGGAAA
TTCTGCCGACCGCCGTATTCACCGAACCCAATACCGGATCGGACCTCGCC
ACGCTGCGCACCCGTGCGGTGAAAGACGGCGATGTCTATAAAATCACCGG
CAACAAGACCTGGATCACCCATGCGTCACGCACCGATATGATGACCCTGC
TGGTGCGCACCAATCCCAACGAGACGGGCTATAAGGGCCTGTCGATGTTT
CTCGCGGAAAAGCCGCGCGGCACAGAGGATAATCTGTTCCCGGCCAGGGG
CATGACCGGCGGCGAAATCGAAGTGCTCGGCTATCGCGGCATGAAGGAAT
ATGAGTTGGCCTTTGATGGTTTCGAAGTGCCTGCCAAAAATCTGCTGGGC
GAGAAAGAA
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