mRNA_P-wetherbeei_contig16.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16.1.1 vs. uniprot
Match: A0A835VUZ4_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835VUZ4_CHLIN) HSP 1 Score: 113 bits (283), Expect = 7.600e-23 Identity = 82/245 (33.47%), Postives = 105/245 (42.86%), Query Frame = 3
Query: 6 YPTPGFFSYHYRLADEPRSVVERAIREMQPLVAAHFPQVRDAIGAEWWAHSRVGGGGHGLHFDTDEAGLRSCHTVRHPAVSSVLYLSRGGGXXXXXXXXXXXXXXXDSGCKDGRSSSGGDTALDAALPASSDGHGPTLITDQRLNLSPAKTAWLAWPRENRLCLFDGALLHGVLPALPPALPPYGEANNGGGIGSSGVGNGAAEEKEDHGAGGERRLTLMIGWWLHDVRGLPARNGELGPNMPMP 740
Y G+FSY + L S V A + +VAA FP VR A AEWWAH R GH LHFD+D+ G VR+P VSSV+YL+ G GPTL+T Q+L A WL PRENRL +FDG+ LHGV+P G GA+ G+ R+TLM+ +W D++ P +G GP+ P P
Sbjct: 480 YGRVGYFSYMHELGSPHLSAVHDAAVLLHRIVAARFPAVRGAKYAEWWAHCRRHPSGHQLHFDSDDEGAGG---VRNPFVSSVIYLTGEVG-------------------------------------------GPTLVTPQKLGGPLADRGWLVHPRENRLAMFDGSFLHGVIP-----------------------GRGASPHP------GQHRVTLMVAFW-RDIQCRPRTDGLPGPSQPFP 648
BLAST of mRNA_P-wetherbeei_contig16.1.1 vs. uniprot
Match: A0A836BAS6_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BAS6_9CHLO) HSP 1 Score: 113 bits (282), Expect = 8.530e-23 Identity = 86/247 (34.82%), Postives = 106/247 (42.91%), Query Frame = 3
Query: 6 YPTPGFFSYHYRLAD-EPR-SVVERAIREMQPLVAAHFPQVRDAIGAEWWAHSRVGGGGHGLHFDTDEAGLRSCHTVRHPAVSSVLYLSRGGGXXXXXXXXXXXXXXXDSGCKDGRSSSGGDTALDAALPASSDGHGPTLITDQRLNLSPAKTAWLAWPRENRLCLFDGALLHGVLPALPPALPPYGEANNGGGIGSSGVGNGAAEEKEDHGAGGERRLTLMIGWWLHDVRGLPARNGELGPNMPMP 740
Y G+FSY + L P S V A +Q LVAA FP V+DA AEWWAH R GH LHFD+D+ G VR+P VSSV+YL+ G GPTL+T Q L A WL PRENRL +FDGA LHGV+P G GA+ H R+TLM+ +W D++ P +G GP+ P P
Sbjct: 391 YGRVGYFSYMHELGSGAPHLSAVHDAAVLLQRLVAARFPAVQDAKYAEWWAHCRRHPSGHQLHFDSDDEGAGG---VRNPIVSSVIYLTGEVG-------------------------------------------GPTLVTPQTLGGPLADRGWLIHPRENRLAMFDGAFLHGVIP-----------------------GRGASPHPSQH------RITLMVAFW-RDIQCRPRTDGLPGPSQPFP 561
BLAST of mRNA_P-wetherbeei_contig16.1.1 vs. uniprot
Match: A0A2K3DHT9_CHLRE (Uncharacterized protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DHT9_CHLRE) HSP 1 Score: 112 bits (280), Expect = 1.500e-22 Identity = 81/245 (33.06%), Postives = 103/245 (42.04%), Query Frame = 3
Query: 6 YPTPGFFSYHYRLADEPRSVVERAIREMQPLVAAHFPQVRDAIGAEWWAHSRVGGGGHGLHFDTDEAGLRSCHTVRHPAVSSVLYLSRGGGXXXXXXXXXXXXXXXDSGCKDGRSSSGGDTALDAALPASSDGHGPTLITDQRLNLSPAKTAWLAWPRENRLCLFDGALLHGVLPALPPALPPYGEANNGGGIGSSGVGNGAAEEKEDHGAGGERRLTLMIGWWLHDVRGLPARNGELGPNMPMP 740
Y G+FSY + L S V A + L AA FP VR+A AEWWAH R GH LHFD+D+ G VR+P VSSV+YL+ G GPTL+T Q L A WL PR+NRL +FDG+ LHGV+P G GA+ H R+TLM+ +W D++ P +G GP+ P P
Sbjct: 376 YGRVGYFSYMHELGSPHLSAVHDAAVLLHRLAAARFPAVREAKYAEWWAHCRRHPSGHQLHFDSDDEGAGG---VRNPVVSSVIYLTGEVG-------------------------------------------GPTLVTPQTLGGPLADRGWLIHPRQNRLAMFDGSFLHGVIP-----------------------GRGASPHPAQH------RITLMVAFW-RDIQCRPRTDGLPGPSQPFP 544
BLAST of mRNA_P-wetherbeei_contig16.1.1 vs. uniprot
Match: D8LIG8_ECTSI (DNA glycosylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIG8_ECTSI) HSP 1 Score: 112 bits (279), Expect = 2.570e-22 Identity = 84/255 (32.94%), Postives = 114/255 (44.71%), Query Frame = 3
Query: 12 TPGFFSYHYRLADEPRSVVERAIREMQPLVAAHFPQVRDAIGAEWWAHSRVGGGGHGLHFDTDEAGLRSCHTVRHPAVSSVLYLSRGGGXXXXXXXXXXXXXXXDSGCKDGRSSSGGDTALDAALPASSDGHGPTLITDQRLNLSP-AKTAWLAWPRENRLCLFDGALLHGVLPA--LP-------PALPPYGEANNGGGIGSSGVGNGAAEEKEDHGAGGERRLTLMIGWWLHDVRGLPARNGELGPNMPMPAP 746
+PG+FSY +RL P + +E+ I ++ L FP+V++A EWWAH R GH +HFD+D GL VR+P VS V+Y++ GD GPTL+T QRL A W+ PR NR+C+FDG +LHGV+P +P P PP G G G E KED AG R+T M+ +W D++ P P+ PAP
Sbjct: 458 SPGYFSYIHRLGGAPTTSIEQVINRVRLLAERSFPEVKEAKFVEWWAHRRPHSSGHQMHFDSDNEGLGG---VRNPIVSVVVYVT-------------------------------GDVG------------GPTLVTTQRLTSKRLADRGWIVHPRVNRVCMFDGGVLHGVIPGRGVPVTETPTHPTPPPE----------EDGQGVGCEEVKEDR-AG--MRVTWMVAFW-RDIQARPP------PSQQSPAP 646
BLAST of mRNA_P-wetherbeei_contig16.1.1 vs. uniprot
Match: A0A7S4LBU0_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LBU0_9EUGL) HSP 1 Score: 106 bits (264), Expect = 9.830e-22 Identity = 81/262 (30.92%), Postives = 112/262 (42.75%), Query Frame = 3
Query: 12 TPGFFSYHYRLADEPRSVVERAIREMQPLVAAHFPQVRDAIGAEWWAHSRVGGGGHGLHFDTDEAGLRSCHTVRHPAVSSVLYLSRGGGXXXXXXXXXXXXXXXDSGCKDGRSSSGGDTALDAALPASSDGHGPTLITDQRL-NLSPAKTAWLAWPRENRLCLFDGALLHGVLPALPPALPPYGEANNGGGIGSSGVGNGAAEEKEDHGAGGERRLTLMIGWWLHDVRGLPARNGELGPNMPMPAPGGAAGRRTGLRWPAAF 794
T +FS+ + L P++ +++ ++ + HFPQ ++A AEWWAH R GH LHFD+ + G VR+P VSSVLYL T D GPTL+T QRL + + A+ W+ +P+ NR C+FDG +LHGV+P G S +GA E G RR+T M +W V P NG G P P P + L+WP F
Sbjct: 73 TSDYFSFLHPLTGPPQNSLDQVLQLLHAEACKHFPQAKEAKFAEWWAHCRPHPSGHQLHFDSADEGRGG---VRNPIVSSVLYL----------------------------------TVEDIG--------GPTLVTRQRLKDKTLARDGWMVFPKLNRYCMFDGGVLHGVIP------------------GRSYPKDGACEA-------GCRRVTFMAAFWKDSVTARPQVNGTPGAAEPFPDPD-----KCLLQWPTLF 259
BLAST of mRNA_P-wetherbeei_contig16.1.1 vs. uniprot
Match: A0A0M0JSE5_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JSE5_9EUKA) HSP 1 Score: 107 bits (268), Expect = 1.200e-21 Identity = 74/219 (33.79%), Postives = 96/219 (43.84%), Query Frame = 3
Query: 21 FFSYHYRLADEPRSVVERAIREMQPLVAAHFPQVRDAIGAEWWAHSRVGGGGHGLHFDTDEAGLRSCHTVRHPAVSSVLYLSRGGGXXXXXXXXXXXXXXXDSGCKDGRSSSGGDTALDAALPASSDGHGPTLITDQRLNLSPAKTAWLAWPRENRLCLFDGALLHGVLPALPPALPPYGEANNGGGIGSSGVGNGAAEEKEDHGAGGERRLTLMIGWW 677
FFSY + L PR ER + + + HFP+ R A EWWAH R G GH LHFD+D+ G +RHP VSS LYL+ G G GPTL+T+QR+ +K W+ P ENR LFDG +LHGV+P P A++GG AE E RR++LM+ +W
Sbjct: 199 FFSYVHPLDVAPRIGFERVLGALHAIACKHFPRARAARYVEWWAHCRPHGVGHQLHFDSDKEGEGG---LRHPLVSSALYLTGGIG-------------------------------------------GPTLVTEQRMGQPLSKRGWMVTPHENRYLLFDGRVLHGVVPGNGPV------AHDGG----------VAEGSE------RRRISLMVAFW 349
BLAST of mRNA_P-wetherbeei_contig16.1.1 vs. uniprot
Match: A0A485KPJ8_9STRA (Aste57867_9872 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KPJ8_9STRA) HSP 1 Score: 109 bits (273), Expect = 1.300e-21 Identity = 89/271 (32.84%), Postives = 119/271 (43.91%), Query Frame = 3
Query: 9 PTPGFFSYHYR--LADEPRSVVERAIRE-MQPLVAAHFPQVRDAIG-AEWWAHSRVGGGGHGLHFDTDEAGLRSCHTVRHPAVSSVLYLSRGGGXXXXXXXXXXXXXXXDSGCKDGRSSSGGDTALDAALPASSDGHGPTLITDQRLNLSPAKT-AWLAWPRENRLCLFDGALLHGVLPALPPALPPYGEANNGGGIGSSGVGNGAAEEKEDHGAGGERRLTLMIGWWLHDVRGLPARNGELGPNMPMPAPGGAAGRRTGLRWPAAFSAVG 806
P G+FSY +R PR +E I+ + PLV +P+ AI AEWWAHSR GH LH+DTDE+ L H V +P VS+V Y A P SS H PTL+TD+ + +L +P EN L +FDG LLHGV+P P S+G ++E +D + RLTLM+G+W DV + + NM +P GA GL WP+ F +G
Sbjct: 215 PDVGYFSYAFRDCATAAPRHCIEAWIQSHLLPLVQQAYPEKAKAIQHAEWWAHSRDQISGHQLHYDTDESRLTENHQVFYPLVSTVWY----------------------------------------ATPGSS--HAPTLVTDKMFGHDALQANGYLVYPEENSLTMFDGRLLHGVVPQFVPK--------------STGD---SSETTKDASSLDRHRLTLMVGFWDKDVASNDFEHDQPTANMALPDDDGA----YGLTWPSHFQDMG 422
BLAST of mRNA_P-wetherbeei_contig16.1.1 vs. uniprot
Match: A0A7S4BN54_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BN54_CHRCT) HSP 1 Score: 101 bits (252), Expect = 2.000e-19 Identity = 73/224 (32.59%), Postives = 96/224 (42.86%), Query Frame = 3
Query: 21 FFSYHYRLADEPRSVVERAIREMQPLVAAHFPQVRDAIGAEWWAHSRVGGGGHGLHFDTDEAGLRSCHTVRHPAVSSVLYLSRGGGXXXXXXXXXXXXXXXDSGCKDGRSSSGGDTALDAALPASSDGHGPTLITDQRLNLSPAKTA---WLAWPRENRLCLFDGALLHGVLPALPPALPPYGEANNGGGIGSSGVGNGAAEEKEDHGAGG--ERRLTLMIGWW 677
FFSY +RL + PR ++R I+ +Q A FP V+ A AEWWAH R GH LHFD+D+ G VRHP S VLYLS G G GPTLIT+Q P + A W P ENR +F+G+LLH V+P G G+ ++ G G +RR++LM+ +W
Sbjct: 183 FFSYVHRLDEPPRCSLDRVIKRLQKHAAEAFPLVKAATRAEWWAHCRPHHTGHQLHFDSDDEGRGG---VRHPIASCVLYLSGGVG-------------------------------------------GPTLITEQHAASRPPRLAAAGWAVHPHENRAVIFNGSLLHAVIP-----------------------GRGSPTADDETGGRGALKRRVSLMVAFW 337
BLAST of mRNA_P-wetherbeei_contig16.1.1 vs. uniprot
Match: A0A2J8A2Y0_9CHLO (Uncharacterized protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A2Y0_9CHLO) HSP 1 Score: 101 bits (252), Expect = 3.160e-19 Identity = 77/245 (31.43%), Postives = 102/245 (41.63%), Query Frame = 3
Query: 6 YPTPGFFSYHYRLADEPRSVVERAIREMQPLVAAHFPQVRDAIGAEWWAHSRVGGGGHGLHFDTDEAGLRSCHTVRHPAVSSVLYLSRGGGXXXXXXXXXXXXXXXDSGCKDGRSSSGGDTALDAALPASSDGHGPTLITDQRLNLSPAKTAWLAWPRENRLCLFDGALLHGVLPALPPALPPYGEANNGGGIGSSGVGNGAAEEKEDHGAGGERRLTLMIGWWLHDVRGLPARNGELGPNMPMP 740
Y G+FSY ++L S V +A + +VA FP +A AEW AH R GH LHFD+D+ G VR+P VS+V+YL+ G G GPTL+T Q L A+ WL PRENRL +F G +LHGV+P P+ P GE R+TLM+ +W D++ P +G GP P P
Sbjct: 231 YGRVGYFSYMHQLGSPALSAVHQAATLLHRIVAQRFPAAAEARYAEW-AHCRRHPSGHQLHFDSDDEGEGG---VRNPIVSTVIYLTGGVG-------------------------------------------GPTLVTPQLLGGPLAQHGWLVHPRENRLGMFTGDVLHGVVPGRGPSPRP-----------------------------GEHRITLMVAFW-RDIQCRPRGDGLPGPTQPFP 398
BLAST of mRNA_P-wetherbeei_contig16.1.1 vs. uniprot
Match: A0A024UER7_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UER7_9STRA) HSP 1 Score: 101 bits (251), Expect = 6.180e-19 Identity = 85/265 (32.08%), Postives = 113/265 (42.64%), Query Frame = 3
Query: 9 PTPGFFSYHYR--LADEPRSVVERAIRE-MQPLVAAHFPQVRDAIG-AEWWAHSRVGGGGHGLHFDTDEAGLRSCHTVRHPAVSSVLYLSRGGGXXXXXXXXXXXXXXXDSGCKDGRSSSGGDTALDAALPASSDGHGPTLITDQRLNLSPAKT-AWLAWPRENRLCLFDGALLHGVLPALPPALPPYGEANNGGGIGSSGVGNGAAEEKEDHGAGGERRLTLMIGWWLHDVRGLPARNGELGPNMPMPAPGGAAGRRTGLRWPA 788
P G+FSY +R P + VE I+E + P V A FP DAI AEWW HSR GH LH+DTDE+ L H++ +P VS+V Y++ G SG PTLITD+ + + +L +P+ NRL +FDG+LLHGV+P ++ D G RLTLM+G+W DV NM +PA G+ T L WPA
Sbjct: 152 PDVGYFSYAFRDCTTSVPSNCVEAWIQEHLLPYVRAAFPDKADAIAHAEWWVHSRDQISGHQLHYDTDESRLTQEHSLNYPLVSTVWYIAPG-----------------QSGA-------------------------PTLITDKTFGQDASVSKGYLVFPQTNRLAMFDGSLLHGVVPHF---------------------------QRNDDETG--HRLTLMVGFWNKDVASSAFNAKHRTANMRLPA-----GKST-LEWPA 339 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16.1.1 >prot_P-wetherbeei_contig16.1.1 ID=prot_P-wetherbeei_contig16.1.1|Name=mRNA_P-wetherbeei_contig16.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=462bp MQPLVAAHFPQVRDAIGAEWWAHSRVGGGGHGLHFDTDEAGLRSCHTVRHback to top mRNA from alignment at P-wetherbeei_contig16:2..1719+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16.1.1 ID=mRNA_P-wetherbeei_contig16.1.1|Name=mRNA_P-wetherbeei_contig16.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1718bp|location=Sequence derived from alignment at P-wetherbeei_contig16:2..1719+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16:2..1719+ >mRNA_P-wetherbeei_contig16.1.1 ID=mRNA_P-wetherbeei_contig16.1.1|Name=mRNA_P-wetherbeei_contig16.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1386bp|location=Sequence derived from alignment at P-wetherbeei_contig16:2..1719+ (Phaeothamnion wetherbeei SAG_119_79)back to top |