mRNA_P-wetherbeei_contig15980.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15980.1.1
Unique NamemRNA_P-wetherbeei_contig15980.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig15980.1.1 vs. uniprot
Match: D8LH57_ECTSI (Putative, Dynein intermediate chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH57_ECTSI)

HSP 1 Score: 325 bits (833), Expect = 7.350e-106
Identity = 163/201 (81.09%), Postives = 177/201 (88.06%), Query Frame = 1 
Query:    1 IYSVQRNPAQNKYFMTVGDWSAKIWAEDLKTPIMTTRYHSAYLTSGCFSPTRAGVFFVTRMDGVLDVWDYFYRQNEVAYSHKVGDAALSSIAVQGTTQAGGKLTAVGDCNGTVSLLELCESLAVPSGSQERIAIGSMFEREMKQEKNLELRERDLRRAXXXXXXXXXXXXXXXKDGREERMEELLRKVDADFLAMVKEAED 603
            IYS+QRNP QNKYFMTVGDW+A+IWAEDLKTPIMTT+YHSAYLTSGCFSPTRAGVFFVTRMDGV+D+WDYFYRQNEVAYSHKVGDA LSSI+VQG  Q GGKL AVGD NGTVSLLE+CESLAV +GSQE+ AIG+MFEREMKQEKNLELRERDLRRA               KDG++ERMEELLRKVDADFLAM+KEAED
Sbjct:  381 IYSIQRNPTQNKYFMTVGDWTARIWAEDLKTPIMTTKYHSAYLTSGCFSPTRAGVFFVTRMDGVVDIWDYFYRQNEVAYSHKVGDAPLSSISVQGNVQVGGKLVAVGDVNGTVSLLEVCESLAVSAGSQEKGAIGAMFEREMKQEKNLELRERDLRRAKAAEQDAKNKADAEKKDGKDERMEELLRKVDADFLAMIKEAED 581
[Close]
BLAST of mRNA_P-wetherbeei_contig15980.1.1 vs. uniprot
Match: A0A835ZH32_9STRA (Putative dynein intermediate chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH32_9STRA)

HSP 1 Score: 319 bits (817), Expect = 6.000e-103
Identity = 169/201 (84.08%), Postives = 187/201 (93.03%), Query Frame = 1 
Query:    1 IYSVQRNPAQNKYFMTVGDWSAKIWAEDLKTPIMTTRYHSAYLTSGCFSPTRAGVFFVTRMDGVLDVWDYFYRQNEVAYSHKVGDAALSSIAVQGTTQAGGKLTAVGDCNGTVSLLELCESLAVPSGSQERIAIGSMFEREMKQEKNLELRERDLRRAXXXXXXXXXXXXXXXKDGREERMEELLRKVDADFLAMVKEAED 603
            IYSVQRNPAQNK+FMTVGDW+A+IWAED+KTPIMTT+YH AYLT GCFSPTRAGVF+VTRMDGV+DVWDY+YRQNEVAYSHKVGDAALSSIAVQG+ QAGG+L AVGD NGTVSLLE+CESLAV  G+QE+ AIG+MFEREMKQEKNLELRERDLRRA  XXXXXXXXXX   KDG++ERMEELLR+VDA FLAM+KEAED
Sbjct:  427 IYSVQRNPAQNKFFMTVGDWTARIWAEDIKTPIMTTKYHGAYLTGGCFSPTRAGVFYVTRMDGVVDVWDYYYRQNEVAYSHKVGDAALSSIAVQGSAQAGGRLVAVGDVNGTVSLLEVCESLAVGQGAQEKAAIGAMFEREMKQEKNLELRERDLRRARAXXXXXXXXXXSEKKDGKDERMEELLRRVDAGFLAMIKEAED 627
[Close]
BLAST of mRNA_P-wetherbeei_contig15980.1.1 vs. uniprot
Match: A0A7S2QVY7_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVY7_9STRA)

HSP 1 Score: 287 bits (735), Expect = 4.140e-91
Identity = 153/201 (76.12%), Postives = 178/201 (88.56%), Query Frame = 1 
Query:    1 IYSVQRNPAQNKYFMTVGDWSAKIWAEDLKTPIMTTRYHSAYLTSGCFSPTRAGVFFVTRMDGVLDVWDYFYRQNEVAYSHKVGDAALSSIAVQGTTQAGGKLTAVGDCNGTVSLLELCESLAVPSGSQERIAIGSMFEREMKQEKNLELRERDLRRAXXXXXXXXXXXXXXXKDGREERMEELLRKVDADFLAMVKEAED 603
            IYS+QRNP  NK+FMTVGDW+A+IW EDLKTPIMTT+YHS+YLTSGC+SPTRAGVF+VTRMDGV+D+WDYFYRQNEVAYSHKVG+ ALS+I+VQG  Q+GG+L AVGD NGTVSLLE+C+SLA    + E++AI  MFERE KQEKNLELRERDL+R      XXXXXXXXXX DG++E+MEELLRKVDADFLAM+KEAED
Sbjct:  391 IYSIQRNPTHNKFFMTVGDWTARIWVEDLKTPIMTTKYHSSYLTSGCWSPTRAGVFYVTRMDGVVDIWDYFYRQNEVAYSHKVGEDALSTISVQGNMQSGGRLVAVGDVNGTVSLLEVCDSLASQQPN-EKMAINGMFERETKQEKNLELRERDLKRQRAAEEXXXXXXXXXXXDGKDEKMEELLRKVDADFLAMIKEAED 590
[Close]
BLAST of mRNA_P-wetherbeei_contig15980.1.1 vs. uniprot
Match: A0A7S3HCJ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HCJ1_9STRA)

HSP 1 Score: 286 bits (733), Expect = 7.830e-91
Identity = 146/201 (72.64%), Postives = 165/201 (82.09%), Query Frame = 1 
Query:    1 IYSVQRNPAQNKYFMTVGDWSAKIWAEDLKTPIMTTRYHSAYLTSGCFSPTRAGVFFVTRMDGVLDVWDYFYRQNEVAYSHKVGDAALSSIAVQGTTQAGGKLTAVGDCNGTVSLLELCESLAVPSGSQERIAIGSMFEREMKQEKNLELRERDLRRAXXXXXXXXXXXXXXXKDGREERMEELLRKVDADFLAMVKEAED 603
            IYS+QRNPA  K F+T+GDW+A+IW EDL+TPIMTT+YHS+YLTSGC+SPTRAGVFFVTRMDGV+D+WDYFYRQNEVAYSHKV D  LSSIAVQGT Q+GGKL A+GD  GTVSLLELCESLAVP  + ER AI  MFEREMKQEKNLE RER+LRR                KD ++E+ME LLRKVDADFLAM+KEAED
Sbjct:  391 IYSIQRNPANTKCFLTIGDWTARIWMEDLRTPIMTTKYHSSYLTSGCWSPTRAGVFFVTRMDGVVDIWDYFYRQNEVAYSHKVCDPTLSSIAVQGTAQSGGKLVAMGDVTGTVSLLELCESLAVPQ-TNERKAIDLMFEREMKQEKNLEARERELRRQKALETDKSTREAQDKKDAKDEKMEALLRKVDADFLAMIKEAED 590
[Close]
BLAST of mRNA_P-wetherbeei_contig15980.1.1 vs. uniprot
Match: A0A7S2FI35_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FI35_9STRA)

HSP 1 Score: 275 bits (704), Expect = 1.080e-86
Identity = 141/201 (70.15%), Postives = 165/201 (82.09%), Query Frame = 1 
Query:    1 IYSVQRNPAQNKYFMTVGDWSAKIWAEDLKTPIMTTRYHSAYLTSGCFSPTRAGVFFVTRMDGVLDVWDYFYRQNEVAYSHKVGDAALSSIAVQGTTQAGGKLTAVGDCNGTVSLLELCESLAVPSGSQERIAIGSMFEREMKQEKNLELRERDLRRAXXXXXXXXXXXXXXXKDGREERMEELLRKVDADFLAMVKEAED 603
            IY+++RNP  NK+FMTVGDW+A+IW ED KTPIMTT+YHSAYLTSGC+SPTRAGVFFVTRMDGV+D+WDYFYRQNEVAYSHKVGD  LS IAV  + QAG +L +VGD  GTVSLLE+CESLA P  + E+ AI +MF+RE KQEKNLE+RERDL+RA               KDG++E+MEELLRKVDADFLAM+KEAED
Sbjct:  374 IYAIERNPTHNKFFMTVGDWTARIWFEDTKTPIMTTKYHSAYLTSGCWSPTRAGVFFVTRMDGVVDIWDYFYRQNEVAYSHKVGDQELSCIAV--SNQAG-RLVSVGDVKGTVSLLEVCESLAAPQAN-EKTAISNMFDRETKQEKNLEVRERDLKRAKAAEAEARNRESADKKDGKDEKMEELLRKVDADFLAMIKEAED 570
[Close]
BLAST of mRNA_P-wetherbeei_contig15980.1.1 vs. uniprot
Match: A0A6V1SU02_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SU02_HETAK)

HSP 1 Score: 265 bits (678), Expect = 3.160e-83
Identity = 141/201 (70.15%), Postives = 164/201 (81.59%), Query Frame = 1 
Query:    1 IYSVQRNPAQNKYFMTVGDWSAKIWAEDLKTPIMTTRYHSAYLTSGCFSPTRAGVFFVTRMDGVLDVWDYFYRQNEVAYSHKVGDAALSSIAVQGTTQAGGKLTAVGDCNGTVSLLELCESLAVPSGSQERIAIGSMFEREMKQEKNLELRERDLRRAXXXXXXXXXXXXXXXKDGREERMEELLRKVDADFLAMVKEAED 603
            IYS+QRNP   K+F+TVGDW+A+IW EDLKTPIMTT+YH AYLT+GC+SP RAGVFFVTRMDGV+D+WDYFYRQNEVAYSHKVGD+ LSSI+VQG  Q GG+L AVGD NGTVSLLE+C+SL  P  + E+ AI +M ERE KQEKNL+LRE      XXXXXXXX       KDG++E+MEELLR VDA FLAM+K AED
Sbjct:  328 IYSIQRNPTNTKFFLTVGDWTARIWTEDLKTPIMTTKYHPAYLTAGCWSPARAGVFFVTRMDGVVDIWDYFYRQNEVAYSHKVGDSPLSSISVQGHVQGGGRLVAVGDTNGTVSLLEVCDSLGSPQPN-EKAAINAMLERETKQEKNLDLREXXXXXXXXXXXXXXQREAAEKKDGKDEKMEELLRMVDASFLAMIKSAED 527
[Close]
BLAST of mRNA_P-wetherbeei_contig15980.1.1 vs. uniprot
Match: A0A7S1G3Z1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G3Z1_9STRA)

HSP 1 Score: 266 bits (681), Expect = 3.450e-83
Identity = 132/201 (65.67%), Postives = 162/201 (80.60%), Query Frame = 1 
Query:    1 IYSVQRNPAQNKYFMTVGDWSAKIWAEDLKTPIMTTRYHSAYLTSGCFSPTRAGVFFVTRMDGVLDVWDYFYRQNEVAYSHKVGDAALSSIAVQGTTQAGGKLTAVGDCNGTVSLLELCESLAVPSGSQERIAIGSMFEREMKQEKNLELRERDLRRAXXXXXXXXXXXXXXXKDGREERMEELLRKVDADFLAMVKEAED 603
            IYS+QRNP   K+F+TVGDW+A++W+ED KTPIMTT+Y  +YLTSGC+SP+RAGVFFVTRMDGV+D+WDY+YRQN VAYSHKVGD +LSS+AVQGTTQ GG+L AVGD NGTVSLLE+CESLAVP  S E++AI  M ERE K+EKNLE R  D+ R                 DG++E+MEE+LRKVDA+FLAM+K+AE+
Sbjct:  369 IYSIQRNPTHPKFFLTVGDWTARVWSEDGKTPIMTTKYCKSYLTSGCWSPSRAGVFFVTRMDGVVDIWDYYYRQNAVAYSHKVGDHSLSSVAVQGTTQTGGRLVAVGDVNGTVSLLEVCESLAVPQ-SNEKVAILGMLERESKREKNLEKRAADIMRRARAAEDGGAKGDDRAPDGKDEKMEEILRKVDAEFLAMIKDAEE 568
[Close]
BLAST of mRNA_P-wetherbeei_contig15980.1.1 vs. uniprot
Match: F0YQ52_AURAN (Uncharacterized protein n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YQ52_AURAN)

HSP 1 Score: 266 bits (679), Expect = 5.540e-83
Identity = 147/201 (73.13%), Postives = 167/201 (83.08%), Query Frame = 1 
Query:    1 IYSVQRNPAQNKYFMTVGDWSAKIWAEDLKTPIMTTRYHSAYLTSGCFSPTRAGVFFVTRMDGVLDVWDYFYRQNEVAYSHKVGDAALSSIAVQGTTQAGGKLTAVGDCNGTVSLLELCESLAVPSGSQERIAIGSMFEREMKQEKNLELRERDLRRAXXXXXXXXXXXXXXXKDGREERMEELLRKVDADFLAMVKEAED 603
            IYS+QRNP  NK+FMTVGDW+A+IW EDLKTPIMTT+YHSAYLTSGC+SPTRAGVF+VTRMDGV+D+WDYFYRQNEVAYSHKVGDAALS+I+V   +   G+L AVGD NGTVSLLE+CESLA P  + E+ AI SM ERE KQEKNLELR+RDLRRA      XXXXXXXXX      +MEE LR VDA+FL M+KEAED
Sbjct:  373 IYSIQRNPTHNKFFMTVGDWTARIWMEDLKTPIMTTKYHSAYLTSGCWSPTRAGVFYVTRMDGVVDIWDYFYRQNEVAYSHKVGDAALSAISV---SNGSGRLVAVGDANGTVSLLEVCESLAAPQAN-EKNAIASMLERETKQEKNLELRDRDLRRAREKKDEXXXXXXXXXXXXXXAKMEEQLRTVDANFLNMIKEAED 569
[Close]
BLAST of mRNA_P-wetherbeei_contig15980.1.1 vs. uniprot
Match: A0A2P4XPQ1_9STRA (Dynein-like protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XPQ1_9STRA)

HSP 1 Score: 250 bits (638), Expect = 1.720e-79
Identity = 123/202 (60.89%), Postives = 157/202 (77.72%), Query Frame = 1 
Query:    1 IYSVQRNPAQNKYFMTVGDWSAKIWAEDLKTPIMTTRYHSAYLTSGCFSPTRAGVFFVTRMDGVLDVWDYFYRQNEVAYSHKVGDAALSSIAVQGTTQAGGKLTAVGDCNGTVSLLELCESLAVPSGSQERIAIGSMFEREMKQEKNLELRERDLRRAXXXXXXXXXXXXXXXKDGREERMEELLRKVDADFLAMVKEAEDS 606
            + ++QRNP  NK+F+T+GDW+A++W EDLKTPIM+T YH +Y+T+GC+SPTRAGVFFVTRMDGV+D+WD+FYRQNEVAYSHKVGD ALSS++VQG   +GGKL AVGDCNG +SL+EL + LA  S   E+ AI  MFERE K+EKNLE +E++LRR                   ++++MEELLR VDA+FL M+KEAEDS
Sbjct:   49 VCAIQRNPTHNKFFLTIGDWTARLWCEDLKTPIMSTIYHDSYVTAGCWSPTRAGVFFVTRMDGVVDIWDFFYRQNEVAYSHKVGDVALSSVSVQGNAGSGGKLVAVGDCNGMISLMELSDGLAA-SQPNEKAAINGMFERETKREKNLEAKEKELRRKKATMEEGAADDRGGSL--KDDKMEELLRTVDANFLGMIKEAEDS 247
[Close]
BLAST of mRNA_P-wetherbeei_contig15980.1.1 vs. uniprot
Match: A0A7S2FLW6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FLW6_9STRA)

HSP 1 Score: 256 bits (654), Expect = 2.610e-79
Identity = 133/201 (66.17%), Postives = 157/201 (78.11%), Query Frame = 1 
Query:    1 IYSVQRNPAQNKYFMTVGDWSAKIWAEDLKTPIMTTRYHSAYLTSGCFSPTRAGVFFVTRMDGVLDVWDYFYRQNEVAYSHKVGDAALSSIAVQGTTQAGGKLTAVGDCNGTVSLLELCESLAVPSGSQERIAIGSMFEREMKQEKNLELRERDLRRAXXXXXXXXXXXXXXXKDGREERMEELLRKVDADFLAMVKEAED 603
            IY++QRN   +K+F+TVGDW+A+IW EDLKTPIMTT+YH AYLT GC+SPTR GVFFVTRMDGV+D+WDYFYRQNEVAYSHKVGD  LSSIAV       G+  AVGD NGTVSLLELC+SLA    ++++ AI +M ERE KQEKNLE RE++LRRA               KDG++E+MEELLRKVDADFL M+KEAED
Sbjct:  372 IYAIQRNLTHSKFFLTVGDWTARIWMEDLKTPIMTTKYHGAYLTGGCWSPTRTGVFFVTRMDGVVDIWDYFYRQNEVAYSHKVGDEQLSSIAVSAPY---GREVAVGDINGTVSLLELCDSLARQQPNEKQ-AILNMLERETKQEKNLEAREKELRRARKEKDDADKRRASDKKDGKDEKMEELLRKVDADFLQMIKEAED 568
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15980.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LH57_ECTSI7.350e-10681.09Putative, Dynein intermediate chain n=1 Tax=Ectoca... [more]
A0A835ZH32_9STRA6.000e-10384.08Putative dynein intermediate chain n=1 Tax=Tribone... [more]
A0A7S2QVY7_9STRA4.140e-9176.12Hypothetical protein n=1 Tax=Triparma pacifica Tax... [more]
A0A7S3HCJ1_9STRA7.830e-9172.64Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S2FI35_9STRA1.080e-8670.15Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A6V1SU02_HETAK3.160e-8370.15Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1G3Z1_9STRA3.450e-8365.67Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
F0YQ52_AURAN5.540e-8373.13Uncharacterized protein n=2 Tax=Aureococcus anopha... [more]
A0A2P4XPQ1_9STRA1.720e-7960.89Dynein-like protein (Fragment) n=1 Tax=Phytophthor... [more]
A0A7S2FLW6_9STRA2.610e-7966.17Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15980contigP-wetherbeei_contig15980:3..608 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog44056.XP_009033999.1
Preferred nameDNAI2
PFAMsWD40
Model size606
Max annot lvl2759|Eukaryota
KEGG koko:K10409,ko:K11143
KEGG Pathwayko05016,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000226,GO:0001539,GO:0001578,GO:0003008,GO:0003341,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005858,GO:0005875,GO:0005886,GO:0005929,GO:0005930,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007275,GO:0007320,GO:0007368,GO:0007389,GO:0007600,GO:0007605,GO:0007618,GO:0007620,GO:0008150,GO:0009605,GO:0009612,GO:0009628,GO:0009799,GO:0009855,GO:0009897,GO:0009986,GO:0009987,GO:0010996,GO:0015630,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019953,GO:0022414,GO:0022607,GO:0030030,GO:0030031,GO:0030286,GO:0030425,GO:0031514,GO:0032501,GO:0032502,GO:0032504,GO:0032838,GO:0032991,GO:0034622,GO:0035082,GO:0036126,GO:0036157,GO:0036158,GO:0036477,GO:0040011,GO:0042995,GO:0043005,GO:0043025,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044297,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044706,GO:0044782,GO:0045503,GO:0045504,GO:0046692,GO:0048609,GO:0048856,GO:0048870,GO:0050877,GO:0050896,GO:0050954,GO:0051179,GO:0051674,GO:0051704,GO:0060271,GO:0060285,GO:0060294,GO:0065003,GO:0070286,GO:0070925,GO:0071840,GO:0071944,GO:0097014,GO:0097223,GO:0097447,GO:0097458,GO:0097729,GO:0098552,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1902494
Exons1
Evalue9.08e-84
EggNOG OGsKOG1587@1|root,KOG1587@2759|Eukaryota
Ec32 ortholog descriptionputative, Dynein intermediate chain
Ec32 orthologEc-24_000630.1
Descriptiondynein heavy chain binding
Cds size606
COG categoryS
BRITEko00000,ko00001,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186073.3731837-CDS-P-wetherbeei_contig15980:2..6081683186073.3731837-CDS-P-wetherbeei_contig15980:2..608Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15980 3..608 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15980.1.1prot_P-wetherbeei_contig15980.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15980 3..608 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15980.1.1

>prot_P-wetherbeei_contig15980.1.1 ID=prot_P-wetherbeei_contig15980.1.1|Name=mRNA_P-wetherbeei_contig15980.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=202bp
IYSVQRNPAQNKYFMTVGDWSAKIWAEDLKTPIMTTRYHSAYLTSGCFSP
TRAGVFFVTRMDGVLDVWDYFYRQNEVAYSHKVGDAALSSIAVQGTTQAG
GKLTAVGDCNGTVSLLELCESLAVPSGSQERIAIGSMFEREMKQEKNLEL
RERDLRRARAAEQETRGRGDGDGKDGREERMEELLRKVDADFLAMVKEAE
DS
back to top

mRNA from alignment at P-wetherbeei_contig15980:3..608+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15980.1.1 ID=mRNA_P-wetherbeei_contig15980.1.1|Name=mRNA_P-wetherbeei_contig15980.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=606bp|location=Sequence derived from alignment at P-wetherbeei_contig15980:3..608+ (Phaeothamnion wetherbeei SAG_119_79)
ATCTACTCAGTGCAGCGCAACCCGGCCCAGAACAAATACTTCATGACGGT
GGGCGATTGGAGCGCCAAGATCTGGGCCGAGGACCTGAAGACGCCCATCA
TGACCACTCGCTACCACAGCGCCTACCTCACCTCCGGCTGCTTCAGCCCC
ACACGCGCCGGCGTCTTCTTCGTGACGCGCATGGATGGCGTACTCGACGT
GTGGGACTACTTCTACCGCCAGAACGAGGTGGCCTACAGCCACAAGGTCG
GCGATGCCGCGCTCTCCTCCATCGCCGTGCAGGGCACGACGCAGGCCGGC
GGCAAGCTGACGGCGGTCGGCGACTGTAACGGCACCGTGTCGCTGCTTGA
GCTCTGCGAGTCGCTGGCCGTGCCGTCCGGCAGCCAGGAGCGAATTGCGA
TCGGGTCCATGTTCGAGCGCGAAATGAAGCAAGAGAAGAACCTCGAGCTG
CGGGAGCGGGACCTGCGGCGGGCGCGCGCGGCCGAGCAGGAGACGCGTGG
CCGCGGCGACGGCGACGGCAAGGATGGCCGCGAGGAGCGCATGGAGGAGC
TGCTGCGCAAGGTGGACGCCGATTTCTTGGCCATGGTCAAGGAAGCAGAG
GACTCG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig15980:3..608+

>mRNA_P-wetherbeei_contig15980.1.1 ID=mRNA_P-wetherbeei_contig15980.1.1|Name=mRNA_P-wetherbeei_contig15980.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=606bp|location=Sequence derived from alignment at P-wetherbeei_contig15980:3..608+ (Phaeothamnion wetherbeei SAG_119_79)
ATCTACTCAGTGCAGCGCAACCCGGCCCAGAACAAATACTTCATGACGGT
GGGCGATTGGAGCGCCAAGATCTGGGCCGAGGACCTGAAGACGCCCATCA
TGACCACTCGCTACCACAGCGCCTACCTCACCTCCGGCTGCTTCAGCCCC
ACACGCGCCGGCGTCTTCTTCGTGACGCGCATGGATGGCGTACTCGACGT
GTGGGACTACTTCTACCGCCAGAACGAGGTGGCCTACAGCCACAAGGTCG
GCGATGCCGCGCTCTCCTCCATCGCCGTGCAGGGCACGACGCAGGCCGGC
GGCAAGCTGACGGCGGTCGGCGACTGTAACGGCACCGTGTCGCTGCTTGA
GCTCTGCGAGTCGCTGGCCGTGCCGTCCGGCAGCCAGGAGCGAATTGCGA
TCGGGTCCATGTTCGAGCGCGAAATGAAGCAAGAGAAGAACCTCGAGCTG
CGGGAGCGGGACCTGCGGCGGGCGCGCGCGGCCGAGCAGGAGACGCGTGG
CCGCGGCGACGGCGACGGCAAGGATGGCCGCGAGGAGCGCATGGAGGAGC
TGCTGCGCAAGGTGGACGCCGATTTCTTGGCCATGGTCAAGGAAGCAGAG
GACTCG
back to top