mRNA_P-wetherbeei_contig15972.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15972.1.1 vs. uniprot
Match: D8LJ70_ECTSI (Similar to chromatin modifying protein 2B n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ70_ECTSI) HSP 1 Score: 168 bits (425), Expect = 7.980e-49 Identity = 108/222 (48.65%), Postives = 142/222 (63.96%), Query Frame = 1
Query: 1 MFGRKKQDPKELAREAKRTAKSGERDMDKELRALERQEAAIIADIKKTAKTGNKEGTRTLAKQLVQLRSQKERLTKARAAISAVGFQATGIASQAXXXXXXXXXXXXXKGMNNAMPADQIAKNMAEFARQSETMEFREDLINDALTDAFYGEEAEAEADGIVNEVLDELGLQVGQNMPDMSQRRPAAAAADTEAQAKRAAMADEDAALDAKTEALLKQLQGL 666
MF +KK DPK A++AKR +SGERD+DKE+R L+R E +++A+IKKTAK GN+ TRTLAKQLVQLR+QK++L ARA ++ VG AT A+ A K +N A+ ++ AK M +FA ++E M E++++DAL DAF GE E EADG+V +VL ELGL++ M D PA A +EA EDA LDAKTE LL QL L
Sbjct: 1 MFHKKKPDPKAAAKDAKRAVRSGERDLDKEIRNLDRSEKSLVAEIKKTAKGGNQGATRTLAKQLVQLRAQKDQLYSARAKLAGVGNAATTAATSASLAGVMGNVAGVMKKVNEAVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEEADGVVGQVLAELGLEMDGKMVDAPTNTPAGVARPSEA---------EDAKLDAKTEELLAQLGAL 213
BLAST of mRNA_P-wetherbeei_contig15972.1.1 vs. uniprot
Match: A0A835YLS1_9STRA (Chromatin modifying protein-like protein 2B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS1_9STRA) HSP 1 Score: 149 bits (377), Expect = 1.310e-41 Identity = 99/218 (45.41%), Postives = 134/218 (61.47%), Query Frame = 1
Query: 16 KQDPKELAREAKRTAKSGERDMDKELRALERQEAAIIADIKKTA-KTGNKEGTRTLAKQLVQLRSQKERLTKARAAISAVGFQATGIASQAXXXXXXXXXXXXXKGMNNAMPADQIAKNMAEFARQSETMEFREDLINDALTDAFYGEEAEAEADGIVNEVLDELGLQVGQNMPDMSQRRPAAAAADTEAQAKRAAMADEDAALDAKTEALLKQLQGL 666
K DPKE+AR AKR + GERD+++ELR L+R E +I DIKKTA K G ++ TR LA QLV LR Q+++L ++ I+AVG+Q T IA QA K +N + ++A + +FA QSETM RE+L++DALTDAF G+ EAE D IV++VL E+GL + M D +PAA +A +D+ LD + E LLKQLQ L
Sbjct: 5 KPDPKEVARSAKRQVRQGERDVERELRNLDRVEKQLIIDIKKTARKPGGEKATRNLAGQLVGLRKQRDKLYTMKSTITAVGYQTTAIAGQAAMAGVMGSVTGAMKDVNAQLSPQEMAAVLQQFALQSETMGMREELMDDALTDAFDGDGVEAETDAIVDQVLTEIGLDMTSKMADAPTGKPAAGQQ----------LAQDDSMLDQRAEELLKQLQAL 212
BLAST of mRNA_P-wetherbeei_contig15972.1.1 vs. uniprot
Match: A0A4D9D707_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D707_9STRA) HSP 1 Score: 135 bits (339), Expect = 6.390e-36 Identity = 81/180 (45.00%), Postives = 114/180 (63.33%), Query Frame = 1
Query: 1 MFGRKKQDPKELAREAKRTAKSGERDMDKELRALERQEAAIIADIKKTAKTGNKEGTRTLAKQLVQLRSQKERLTKARAAISAVGFQATGIASQAXXXXXXXXXXXXXKGMNNAMPADQIAKNMAEFARQSETMEFREDLINDALTDAFYGEEAEAEADGIVNEVLDELGLQVGQNMPDM 540
MFG+KK PKE RE KR + ERDMD+EL+ L R+EA +I DIKK A + +AK LVQLR+QK++L + ++ VG++A+ + SQA MN M A + +K M EFARQ+E M +EDL++DAL DAF G+ E EA+ +VN+VL+E+GL++G M D+
Sbjct: 1 MFGQKKLTPKEQLRETKREIRHNERDMDRELQNLAREEAKLIHDIKKMAANNQHGPLKVMAKNLVQLRAQKDKLITMKTTMTGVGYKASLMHSQAAVGQAMGRMTGVMGDMNEMMDATKTSKVMTEFARQNEYMNVKEDLLDDALMDAFDGDGVEEEAESVVNQVLEEIGLELGSKMADV 180
BLAST of mRNA_P-wetherbeei_contig15972.1.1 vs. uniprot
Match: A0A024UK03_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UK03_9STRA) HSP 1 Score: 132 bits (331), Expect = 1.120e-34 Identity = 78/189 (41.27%), Postives = 117/189 (61.90%), Query Frame = 1
Query: 4 FGRKKQDPKELAREAKRTAKSGERDMDKELRALERQEAAIIADIKKTAKTGNKEGTRTLAKQLVQLRSQKERLTKARAAISAVGFQATGIASQAXXXXXXXXXXXXXKGMNNAMPADQIAKNMAEFARQSETMEFREDLINDALTDAFYGEEAEAEADGIVNEVLDELGLQVGQNMPDMSQRRPAAAAA 570
FG+ ++ P+E A+EAKR +R++++E ALERQE +IADIKK AK GN GT+ LAKQL+QLR QK+++T ++ + ++G Q T +A+Q + M ++ K + +F +QSE M RE++++D L DAF EE EAE D +V++VL E+GL +G M D R+ A AA
Sbjct: 4 FGKPEKTPRERAKEAKRGIAQSQRELEREKMALERQEKQLIADIKKAAKEGNTGGTKILAKQLIQLRQQKDKMTMLKSNLGSIGLQTTSMAAQMTMVAAIEKTTKTMASTSKQMDMNRFQKVIMDFEKQSEMMGMREEMLDDTLIDAFDDEEVEAEGDAVVDQVLTEIGLDLGSLMADAPTRQANATAA 192
BLAST of mRNA_P-wetherbeei_contig15972.1.1 vs. uniprot
Match: W4H7G6_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H7G6_9STRA) HSP 1 Score: 130 bits (326), Expect = 6.440e-34 Identity = 76/188 (40.43%), Postives = 116/188 (61.70%), Query Frame = 1
Query: 4 FGRKKQDPKELAREAKRTAKSGERDMDKELRALERQEAAIIADIKKTAKTGNKEGTRTLAKQLVQLRSQKERLTKARAAISAVGFQATGIASQAXXXXXXXXXXXXXKGMNNAMPADQIAKNMAEFARQSETMEFREDLINDALTDAFYGEEAEAEADGIVNEVLDELGLQVGQNMPDMSQRRPAAAA 567
FG+ ++ P+E A+EAKR +R++++E ALERQE +IADIK+ AK GN GT+ LAKQL+QLR QK+++T ++ + ++G Q T +A+Q N M ++ + + +F +QSE M RE++++D L DAF EE EAE D +V++VL E+GL + M D R+ AAA
Sbjct: 4 FGKPEKTPREQAKEAKRGISQSQRELEREKMALERQEKLLIADIKRAAKEGNNGGTKILAKQLIQLRQQKDKMTMMKSNLGSIGLQTTSMAAQMTMVSAMEKSTKTMAATNKQMDMNRFQQVIMDFEKQSEMMGMREEMLDDTLIDAFDDEEVEAEGDAVVDQVLTEIGLDLASLMADAPTRQANAAA 191
BLAST of mRNA_P-wetherbeei_contig15972.1.1 vs. uniprot
Match: A0A7S1BMU4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BMU4_9STRA) HSP 1 Score: 125 bits (313), Expect = 6.230e-32 Identity = 74/176 (42.05%), Postives = 108/176 (61.36%), Query Frame = 1
Query: 28 KELAREAKRTAKSGERDMDKELRALERQEAAIIADIKKTAKTG----NKEGTRTLAKQLVQLRSQKERLTKARAAISAVGFQATGIASQAXXXXXXXXXXXXXKGMNNAMPADQIAKNMAEFARQSETMEFREDLINDALTDAFYGEEAEAEADGIVNEVLDELGLQVGQNMPDMS 543
KE ARE KR +S +R +D+ELR LERQE ++ADIKK AKTG N + L+KQLV R QK+RL ++++ I ++ +AT ++SQ N A+ +++ M EF RQ+E M+ +EDL NDAL DAF G+E E EAD + +++L ELGL++ M ++
Sbjct: 12 KEAARETKREVRSAQRGIDRELRELERQERTLLADIKKRAKTGGITKNDSALKALSKQLVHTRGQKDRLQESKSQIGSMALKATAMSSQVAAAQAVGKVTQAMGNANQAVDIKKLSAQMGEFMRQNEMMDLKEDLFNDALADAFDGDEVEEEADAVTDQILAELGLELSGKMEGLN 187
BLAST of mRNA_P-wetherbeei_contig15972.1.1 vs. uniprot
Match: A0A6G0WZJ2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WZJ2_9STRA) HSP 1 Score: 120 bits (300), Expect = 4.490e-30 Identity = 77/178 (43.26%), Postives = 113/178 (63.48%), Query Frame = 1
Query: 4 FGRKKQDPKELAREAKRTAKSGERDMDKELRALERQEAAIIADIKKTAKTGNKEGTRTLAKQLVQLRSQKERLTKARAAISAVGFQATGIASQAXXXXXXXXXXXXXKGMNNAMPADQIAKNMAEFARQSETMEFREDLINDALTDAFYGEEAEAEADGIVNEVLDELGLQVGQNMPD 537
FG+ + P+E AREAKR +RD+++E ALERQE +IADIK+ AK N+ GT+ LAKQL+Q+R QK+++T ++++ ++ Q T XXXXXX + M + K + EF +Q+E M +E++IND+L DAF EE E E D +V++VL E+GL +GQ M D
Sbjct: 4 FGKPTKTPREQAREAKREISHSQRDIEREKMALERQERQLIADIKRAAKERNQAGTKILAKQLIQVRQQKDKMTVMKSSLGSMSLQTTSXXXXXXXXXXXEKSTKTMAATSKQMDMGRFQKVIMEFEKQNEMMGVKEEMINDSLIDAFDDEEIEVEGDAVVDQVLTEIGLDLGQLMAD 181
BLAST of mRNA_P-wetherbeei_contig15972.1.1 vs. uniprot
Match: A0A7S2EVL5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EVL5_TRICV) HSP 1 Score: 120 bits (300), Expect = 5.790e-30 Identity = 79/184 (42.93%), Postives = 109/184 (59.24%), Query Frame = 1
Query: 4 FGRKKQDPKELAREAKRTAK----SGERDMDKELRALERQEAAIIADIKKTAK----TGNKEGTRTLAKQLVQLRSQKERLTKARAAISAVGFQATGIASQAXXXXXXXXXXXXXKGMNNAMPADQIAKNMAEFARQSETMEFREDLINDALTDAFYGEEAEAEADGIVNEVLDELGLQVGQNM 531
F KK E A+ AKR+ K +RDMD+E+R L+R EA ++A+IKK AK +GN LAKQLVQ+R QKE++ +A + AVG QAT +ASQ N ++ A + K M EF RQ+E M RE+L++DALTDAF +E E EA+ + N+VL ELG+++ M
Sbjct: 3 FWEKKPTAAEAAKAAKRSTKREVRGAQRDMDREIRELDRTEAQVLAEIKKRAKAPGVSGNDRALSALAKQLVQIRKQKEKMFSTKANLGAVGMQATAMASQVAAASAVGNVTKAMGTANASIDAAAVGKIMTEFQRQNEIMGVREELMDDALTDAFDADEVEEEAEAVTNQVLAELGVELDSKM 186
BLAST of mRNA_P-wetherbeei_contig15972.1.1 vs. uniprot
Match: A0A067D5G0_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D5G0_SAPPC) HSP 1 Score: 115 bits (287), Expect = 3.560e-28 Identity = 75/182 (41.21%), Postives = 107/182 (58.79%), Query Frame = 1
Query: 1 MFGRKKQDPK---ELAREAKRTAKSGERDMDKELRALERQEAAIIADIKKTAKTGNKEGTRTLAKQLVQLRSQKERLTKARAAISAVGFQATGIASQAXXXXXXXXXXXXXKGMNNAMPADQIAKNMAEFARQSETMEFREDLINDALTDAFYGEEAEAEADGIVNEVLDELGLQVGQNMPD 537
MFG K PK E AREAKR G+RD+++E LERQE +I DIKK AK GN+ GT+ LAKQLVQ+R+QKE+L + ++ +G QA+ +A+Q N M +I K + EF +QSE M ++++ D L DAF ++ E E D +V++VL E+GL + + D
Sbjct: 1 MFGFGKAPPKTAREQAREAKREIAHGQRDLEREKMVLERQEKQLILDIKKAAKDGNQAGTKILAKQLVQVRAQKEKLMVMKVSLGGIGMQASAMAAQQTMVATMEKTTKTMVAANKQMDMSRIQKTLMEFEKQSELMSMGQEMMEDTLIDAF--DDDEVEEDLVVDQVLAEIGLDLHTQLAD 180
BLAST of mRNA_P-wetherbeei_contig15972.1.1 vs. uniprot
Match: A0A1V9YGJ3_9STRA (SNF7 family protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGJ3_9STRA) HSP 1 Score: 114 bits (285), Expect = 6.370e-28 Identity = 69/170 (40.59%), Postives = 106/170 (62.35%), Query Frame = 1
Query: 4 FGRKKQDPKELAREAKRTAKSGERDMDKELRALERQEAAIIADIKKTAKTGNKEGTRTLAKQLVQLRSQKERLTKARAAISAVGFQATGIASQAXXXXXXXXXXXXXKGMNNAMPADQIAKNMAEFARQSETMEFREDLINDALTDAFYGEEAEAEADGIVNEVLDELGL 513
FG+ ++ P+E AREAKR G+RD+++E ALERQE ++ DIK+ AK GN GT+ LAKQLVQ+R QK++L+ +A + + QA+ +A+Q N M +I K + EF +QSE M +E++++D L DAF E+ + E + +V++VL E+GL
Sbjct: 4 FGKPQKTPREQAREAKREIAHGQRDLEREKAALERQEKTLVLDIKRAAKDGNAAGTKILAKQLVQVRQQKDKLSVMKANLGGIAMQASTMAAQHVVMATMEKTTKTMVAANKQMDMGRIQKTLMEFEKQSEMMNMKEEMLDDTLIDAF--EDDDEEENLVVDQVLAEIGL 171 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15972.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15972.1.1 >prot_P-wetherbeei_contig15972.1.1 ID=prot_P-wetherbeei_contig15972.1.1|Name=mRNA_P-wetherbeei_contig15972.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=225bp MFGRKKQDPKELAREAKRTAKSGERDMDKELRALERQEAAIIADIKKTAKback to top mRNA from alignment at P-wetherbeei_contig15972:503..1432- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15972.1.1 ID=mRNA_P-wetherbeei_contig15972.1.1|Name=mRNA_P-wetherbeei_contig15972.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=930bp|location=Sequence derived from alignment at P-wetherbeei_contig15972:503..1432- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15972:503..1432- >mRNA_P-wetherbeei_contig15972.1.1 ID=mRNA_P-wetherbeei_contig15972.1.1|Name=mRNA_P-wetherbeei_contig15972.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=675bp|location=Sequence derived from alignment at P-wetherbeei_contig15972:503..1432- (Phaeothamnion wetherbeei SAG_119_79)back to top |