mRNA_P-wetherbeei_contig1592.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1592.4.1 vs. uniprot
Match: D8LFT9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFT9_ECTSI) HSP 1 Score: 335 bits (859), Expect = 2.760e-112 Identity = 171/253 (67.59%), Postives = 200/253 (79.05%), Query Frame = 1
Query: 181 AGGLAGTAVDVALYPLDTIKTRLQSAQGFVKAGGFSGIYKGLGAAAVGSAPGAAVFFSTYESAKAFAGRESPAVHMAAASAGEVMACVVRVPTENVKQKVQAGLHATGRGAVVAILKADGAHGFYAGFWTTVMREVPFSLIQFPLYERFKALWATYRGAPAEPYQAAACGSAAGAIAAAITTPLDVVKTRLMLGKDRHGLPYKGMVATMRRIRAEEGPRALLSGLTPRITWIAIGGYVFFGVYETAKDAILAL 939
AGG+AGTAVDVALYPLDTIKTRLQS +GFVK+GG G+Y GL AAAVGSAPGAA+FFS+YE+AK +SP HMAAAS E MAC+VRVPTENVKQK+QAGLH T + AILK G GFY G+ TTV+RE+PFS IQFP+YE KA WA RG P EPY+AA CGS +GA AAA+TTP+DVVKTRLMLG D+HG Y+G+ T RR+ EEG AL+SG+TPR+TWI IGG+VFFGVYE AK ++ L
Sbjct: 13 AGGMAGTAVDVALYPLDTIKTRLQSPEGFVKSGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKHALDPDSPLAHMAAASVAETMACLVRVPTENVKQKMQAGLHGTATETMNAILKNSGMMGFYTGYLTTVVREIPFSFIQFPIYEGLKAAWAKRRGGPLEPYEAAGCGSVSGAFAAAVTTPMDVVKTRLMLGTDKHGETYRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGAKTWLMGL 265
BLAST of mRNA_P-wetherbeei_contig1592.4.1 vs. uniprot
Match: A0A835YJ97_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ97_9STRA) HSP 1 Score: 331 bits (848), Expect = 1.430e-110 Identity = 172/264 (65.15%), Postives = 201/264 (76.14%), Query Frame = 1
Query: 151 HSRSLSAPPQAGGLAGTAVDVALYPLDTIKTRLQSAQGFVKAGGFSGIYKGLGAAAVGSAPGAAVFFSTYESAKAFAGRES-PAVHMAAASAGEVMACVVRVPTENVKQKVQAGLHATGRGAVV---AILKADGAHGFYAGFWTTVMREVPFSLIQFPLYERFKALWATYRGAPAEPYQAAACGSAAGAIAAAITTPLDVVKTRLMLGKDRHGLPYKGMVATMRRIRAEEGPRALLSGLTPRITWIAIGGYVFFGVYETAKDAI 930
H S +GG+AGT+VDVAL+PLDTIKTRLQS+QGF+KAGGF G+Y GL AAAVGSAPGAA FFSTYE K G S P+ HMAAAS E++AC+VRVPTENVKQK+QAG+ + AV +IL A GA GFYAG+ TT+MRE+PFSLIQFPLYER KA+W RGAP YQAA CGS +GA A A+TTP DVVKTRLMLG D+HGLPYKGMV T +RI A+EG AL G+ PR+ WI IGG+VFFG YE +K +
Sbjct: 3 HQPSFVLALVSGGIAGTSVDVALFPLDTIKTRLQSSQGFIKAGGFKGVYNGLSAAAVGSAPGAAAFFSTYEGLKVRLGDPSAPSTHMAAASGAEIVACLVRVPTENVKQKMQAGVGTSSSSAVATCRSILSASGARGFYAGYMTTIMREIPFSLIQFPLYERMKAVWGRRRGAPVHSYQAAVCGSLSGAFAGALTTPFDVVKTRLMLGADKHGLPYKGMVPTFQRIVADEGAAALFGGIVPRVMWIGIGGFVFFGAYEASKRTL 266
BLAST of mRNA_P-wetherbeei_contig1592.4.1 vs. uniprot
Match: W7TQP7_9STRA (S-adenosylmethionine mitochondrial carrier protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQP7_9STRA) HSP 1 Score: 298 bits (763), Expect = 2.650e-97 Identity = 155/253 (61.26%), Postives = 188/253 (74.31%), Query Frame = 1
Query: 178 QAGGLAGTAVDVALYPLDTIKTRLQSAQGFVKAGGFSGIYKGLGAAAVGSAPGAAVFFSTYESAKAFA-----GRESPAVHMAAASAGEVMACVVRVPTENVKQKVQAGLHATGRGAVVAILKADGAHGFYAGFWTTVMREVPFSLIQFPLYERFKALWATYRGAPAEPYQAAACGSAAGAIAAAITTPLDVVKTRLMLGKDRHGLPYKGMVATMRRIRAEEGPRALLSGLTPRITWIAIGGYVFFGVYETAK 921
QAGG AGTAVD++L+PLDTIKTRLQ+++GF KAGGF G+YKGLGAAA GSAPGAA+FFS YE+ K A R +P VHM AAS GE AC++RVPTENVKQ +QAG + T A+ I K +G GFY GF +TV RE+PFS +QFP+YE KA WA +G P P QAAACGS AGA+AAA+TTPLDV+KTRL+L KD G Y G+V RR+ AEEGP L +G+ PR+ WI IGG+V+FG YE +
Sbjct: 18 QAGGAAGTAVDMSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGAALFFSIYETIKIEAEPLVSDRLAPLVHMVAASVGETGACLIRVPTENVKQNLQAGRYNTNAEALRTIWKQEGVMGFYKGFLSTVFREIPFSFLQFPMYEAAKAFWAQEQGRPVSPLQAAACGSVAGAVAAAVTTPLDVIKTRLILEKDMQGRKYHGIVDVFRRVVAEEGPMTLFAGVAPRVMWITIGGFVYFGAYEEVR 270
BLAST of mRNA_P-wetherbeei_contig1592.4.1 vs. uniprot
Match: A0A7S2Y3T2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3T2_9STRA) HSP 1 Score: 293 bits (749), Expect = 1.740e-95 Identity = 152/254 (59.84%), Postives = 195/254 (76.77%), Query Frame = 1
Query: 181 AGGLAGTAVDVALYPLDTIKTRLQSAQGFVKAGGFSGIYKGLGAAAVGSAPGAAVFFSTYESAK-----AFAGRESPAVHMAAASAGEVMACVVRVPTENVKQKVQAGLHATGRGAVVAILKADGAHGFYAGFWTTVMREVPFSLIQFPLYERFKALWATYRGAPAEPYQAAACGSAAGAIAAAITTPLDVVKTRLMLGK-DRHGLPYKGMVATMRRIRAEEGPRALLSGLTPRITWIAIGGYVFFGVYETAKD 924
+GG AGT+VDVAL+PLDTIKTRLQS++GFVKAGGF GIY+GL AAA GSAPGAA+FFS+YE++K F + +P VHM +AS GE +AC+VRVPTE VKQ++Q G + + R AV I+K +G GFY G+ TTV RE+PFS IQFP+YE K W+ ++G P Q+A CGS +G IAA ITTPLDVVKTRLMLG+ D HG+ Y+GM++T+++I +EG L +G +PR+TWI+IGG+VFFG YE AK
Sbjct: 15 SGGCAGTSVDVALFPLDTIKTRLQSSEGFVKAGGFRGIYRGLSAAAAGSAPGAALFFSSYEASKEWGTKTFDEKYAPLVHMGSASVGETVACLVRVPTEVVKQRMQTGQYGSFREAVSTIMKTEGPGGFYTGYLTTVAREIPFSFIQFPMYEGLKKYWSEWQGKEVGPSQSALCGSISGGIAAGITTPLDVVKTRLMLGQADLHGVKYEGMLSTLQKIYVQEGMPKLFAGFSPRVTWISIGGFVFFGSYEAAKS 268
BLAST of mRNA_P-wetherbeei_contig1592.4.1 vs. uniprot
Match: A0A6G0XXM9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXM9_9STRA) HSP 1 Score: 291 bits (745), Expect = 3.840e-95 Identity = 151/253 (59.68%), Postives = 184/253 (72.73%), Query Frame = 1
Query: 190 LAGTAVDVALYPLDTIKTRLQSAQGFVKAGGFSGIYKGLGAAAVGSAPGAAVFFSTYESAKAFAGRE------SPAVHMAAASAGEVMACVVRVPTENVKQKVQAGLHATGRGAVVAILKADGAHGFYAGFWTTVMREVPFSLIQFPLYERFKALWATYRGAPAEPYQAAACGSAAGAIAAAITTPLDVVKTRLMLGKDRHGLPYKGMVATMRRIRAEEGPRALLSGLTPRITWIAIGGYVFFGVYETAKDAI 930
+AGT VDVALYPLDTIKTRLQS+QGF+KAGGF G+YKGL AAA GSAPGAA+FFSTYES K+F ++ SPA+HMA+A+ GE C++RVPTE VKQ +Q G + T + +V +I G GFY G+W+ + RE+PFS IQFPL+E KA W Y+G P P Q A CGS +G IAA ITTPLDVVKTRLMLGKD G+ YKGM R+ +EG + L SG+ PR WI IGG+VFFGVYE A ++
Sbjct: 1 MAGTGVDVALYPLDTIKTRLQSSQGFIKAGGFKGVYKGLSAAAAGSAPGAALFFSTYESTKSFLQKQNPHLADSPAIHMASAAMGETAGCLIRVPTEIVKQNLQTGAYKTFQESVSSIYANKGIAGFYRGYWSLLAREIPFSFIQFPLWEGLKASWGKYQGEPVSPVQGAICGSISGGIAAFITTPLDVVKTRLMLGKDAQGVEYKGMRDAFTRVYTQEGWQTLFSGVKPRTMWITIGGFVFFGVYEQASASL 253
BLAST of mRNA_P-wetherbeei_contig1592.4.1 vs. uniprot
Match: A0A1V9ZD58_9STRA (S-adenosylmethionine mitochondrial carrier protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZD58_9STRA) HSP 1 Score: 291 bits (744), Expect = 9.310e-95 Identity = 151/262 (57.63%), Postives = 191/262 (72.90%), Query Frame = 1
Query: 154 SRSLSAPPQAGGLAGTAVDVALYPLDTIKTRLQSAQGFVKAGGFSGIYKGLGAAAVGSAPGAAVFFSTYESAKAFAGRE------SPAVHMAAASAGEVMACVVRVPTENVKQKVQAGLHATGRGAVVAILKADGAHGFYAGFWTTVMREVPFSLIQFPLYERFKALWATYRGAPAEPYQAAACGSAAGAIAAAITTPLDVVKTRLMLGKDRHGLPYKGMVATMRRIRAEEGPRALLSGLTPRITWIAIGGYVFFGVYETAK 921
S+S AGG+AGT+VDVAL+PLDTIKTRLQS+QGF+KAGGF G+YKGL AAA GSAPGAA+FFSTYE++K + SP +HM+AA+ GE AC+VRVPTE VKQ +Q G + + ++ + A+G GFY G+W+ + RE+PFS IQFPL+E KA W+ RG P+Q A CGS +G IAA+ITTPLDVVKTRLMLGKD HG+ Y+GM T R+ +EG + L SG+ PR WI+IGG+VFFG YE+A
Sbjct: 7 SKSFFTSLIAGGIAGTSVDVALFPLDTIKTRLQSSQGFLKAGGFKGVYKGLSAAAAGSAPGAALFFSTYETSKEVLQNKLPHLSNSPLIHMSAAACGETAACLVRVPTEIVKQNMQTGALSGFQHSIKTLYAANGIAGFYRGYWSMLAREIPFSFIQFPLWEGLKATWSKQRGEQVSPFQGAICGSISGGIAASITTPLDVVKTRLMLGKDAHGVEYRGMKDTFMRVYTDEGWQTLFSGIKPRTMWISIGGFVFFGAYESAS 268
BLAST of mRNA_P-wetherbeei_contig1592.4.1 vs. uniprot
Match: A0A1Y1Y7Z0_9FUNG (Mitochondrial carrier n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y7Z0_9FUNG) HSP 1 Score: 289 bits (740), Expect = 1.920e-94 Identity = 153/251 (60.96%), Postives = 183/251 (72.91%), Query Frame = 1
Query: 190 LAGTAVDVALYPLDTIKTRLQSAQGFVKAGGFSGIYKGLGAAAVGSAPGAAVFFSTYESAKAFAG----RESPAVHMAAASAGEVMACVVRVPTENVKQKVQAGLHATGRGAVVAILKADGAHGFYAGFWTTVMREVPFSLIQFPLYERFKALWATYRGAPAEPYQAAACGSAAGAIAAAITTPLDVVKTRLMLGKDRHGLPYKGMVATMRRIRAEEGPRALLSGLTPRITWIAIGGYVFFGVYETAKDAI 930
+AGTAVD AL+PLDTIKTRLQS GF+K+GGFSGIY GL +A +GSAPGAA FF TYE+ K ESP VHMAAA+ GE+ AC VRVPTE +KQ++Q H+T + A+L+ADG GFY G+ +TV+RE+PF+ IQFPLYER K W Y+G EP++A CGS AG +AAAITTPLDVVKTRLML Y G+ TMRRI AEEG RAL SG+ PR+ WI+IGGY+F GVYE AK I
Sbjct: 1 MAGTAVDTALFPLDTIKTRLQSKAGFIKSGGFSGIYSGLSSAVIGSAPGAAAFFVTYETLKTTLSGNEANESPFVHMAAATGGEISACFVRVPTEVIKQRMQTKQHSTMSATIKALLRADGVLGFYRGYLSTVVREIPFTCIQFPLYERLKVEWGRYKGRKVEPWEAGLCGSFAGGVAAAITTPLDVVKTRLMLSGHHQ---YSGIFGTMRRIYAEEGLRALFSGIGPRVMWISIGGYIFLGVYEKAKKTI 248
BLAST of mRNA_P-wetherbeei_contig1592.4.1 vs. uniprot
Match: H3GCD2_PHYRM (Uncharacterized protein n=22 Tax=Phytophthora TaxID=4783 RepID=H3GCD2_PHYRM) HSP 1 Score: 286 bits (732), Expect = 9.720e-93 Identity = 149/266 (56.02%), Postives = 191/266 (71.80%), Query Frame = 1
Query: 160 SLSAPPQAGGLAGTAVDVALYPLDTIKTRLQSAQGFVKAGGFSGIYKGLGAAAVGSAPGAAVFFSTYESAKAFAG------RESPAVHMAAASAGEVMACVVRVPTENVKQKVQAGLHATGRGAVVAILKADGAHGFYAGFWTTVMREVPFSLIQFPLYERFKALWATYRGAPAEPYQAAACGSAAGAIAAAITTPLDVVKTRLMLGKDRHGLPYKGMVATMRRIRAEEGPRALLSGLTPRITWIAIGGYVFFGVYETAKDAILAL 939
SL A G +AGT+VD+AL+PLDTIKTRLQSA GF KAGGF G+Y GL AAA GSAPG A+FFSTYE++K+ G + SP VHMAAA++GE+ AC+VR PTE VKQ++Q G++ + A+ AI A+G GFY G+W+ + RE+PFS IQFPL+E K W+ + AP Q A CGS AG +AA+ITTPLDVVKTRLMLGKD G+PYKG ++T+ R+ +EG + L SG+ PR WI+IGG+VFFG+YE +
Sbjct: 21 SLLAWRLGGAVAGTSVDIALFPLDTIKTRLQSAHGFFKAGGFRGVYSGLSAAAAGSAPGGALFFSTYETSKSLIGLVAPEKKHSPLVHMAAAASGEMAACLVRTPTEIVKQRMQTGVYKSLPEALNAIRAAEGVAGFYRGYWSMIAREIPFSFIQFPLWEGLKYKWSQKQDAPVTSLQGAVCGSIAGGVAASITTPLDVVKTRLMLGKDAKGVPYKGTLSTLSRVYTDEGLKRLFSGVGPRTMWISIGGFVFFGMYEKTSSTFATI 286
BLAST of mRNA_P-wetherbeei_contig1592.4.1 vs. uniprot
Match: A0A8K1CHB3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHB3_PYTOL) HSP 1 Score: 285 bits (729), Expect = 2.350e-92 Identity = 150/263 (57.03%), Postives = 188/263 (71.48%), Query Frame = 1
Query: 154 SRSLSAPPQAGGLAGTAVDVALYPLDTIKTRLQSAQGFVKAGGFSGIYKGLGAAAVGSAPGAAVFFSTYE-SAKAFAG-----RESPAVHMAAASAGEVMACVVRVPTENVKQKVQAGLHATGRGAVVAILKADGAHGFYAGFWTTVMREVPFSLIQFPLYERFKALWATYRGAPAEPYQAAACGSAAGAIAAAITTPLDVVKTRLMLGKDRHGLPYKGMVATMRRIRAEEGPRALLSGLTPRITWIAIGGYVFFGVYETAKD 924
S+ A G +AGT+VD+AL+PLDTIKTRLQSA+GF KAGGF G+Y GL AAA GSAPG A+FFS YE S KA A ++SP HM AA+ GE+ AC+VRVPTE VKQ++Q G++++ +GA+V I +G GFY G+W+ + RE+PFS IQFPL+E K W+ + AP Q A CGS AG AA+ITTPLDVVKTRLMLGKD G+PY G V T R+ EEG + L SG+ PR WI+IGG+VFFG+YE A +
Sbjct: 14 SKGFLASLLGGAVAGTSVDIALFPLDTIKTRLQSAEGFFKAGGFRGVYSGLSAAAAGSAPGGAMFFSAYETSKKAIAATFPEHKQSPFAHMGAAAVGEMSACLVRVPTEIVKQRMQTGVYSSLQGAIVGIRTTEGVFGFYRGYWSMIAREIPFSFIQFPLWEGLKNQWSKQQNAPVSSLQGAICGSIAGGCAASITTPLDVVKTRLMLGKDAKGVPYTGTVDTFTRVYREEGVKRLFSGVGPRTMWISIGGFVFFGMYEKATE 276
BLAST of mRNA_P-wetherbeei_contig1592.4.1 vs. uniprot
Match: A0A024U5F9_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces TaxID=100860 RepID=A0A024U5F9_9STRA) HSP 1 Score: 283 bits (723), Expect = 1.510e-91 Identity = 146/256 (57.03%), Postives = 181/256 (70.70%), Query Frame = 1
Query: 181 AGGLAGTAVDVALYPLDTIKTRLQSAQGFVKAGGFSGIYKGLGAAAVGSAPGAAVFFSTYESAKAFAGR------ESPAVHMAAASAGEVMACVVRVPTENVKQKVQAGLHATGRGAVVAILKADGAHGFYAGFWTTVMREVPFSLIQFPLYERFKALWATYRGAPAEPYQAAACGSAAGAIAAAITTPLDVVKTRLMLGKDRHGLPYKGMVATMRRIRAEEGPRALLSGLTPRITWIAIGGYVFFGVYETAKDAI 930
AGG+AGT VDVALYPLDTIKTRLQS+QGF+KAGGF G+YKGL AAA GSAPGAA+FFSTYE+ K F + +SP VHMA+A+ GE C+VRVPTE VKQ +Q G + + ++ +I G GFY G+W+ + RE+PFS IQFPL+E K W ++G P Q A CGS +G AA +TTPLDV+KTRLMLGKD G+ Y+GM R+ +EG + L SG+ PR TWI IGG+VFFGVYE A +
Sbjct: 18 AGGMAGTGVDVALYPLDTIKTRLQSSQGFLKAGGFKGVYKGLSAAAAGSAPGAALFFSTYETTKRFLQQLQPHLADSPVVHMASAAMGETAGCLVRVPTEIVKQNLQTGAFQSFQESIRSIYGTSGVAGFYRGYWSLLAREIPFSFIQFPLWEGMKTAWGHHQGEIVSPVQGAVCGSISGGFAAFVTTPLDVIKTRLMLGKDAQGVEYRGMRDAFTRVYTQEGWQTLFSGVKPRTTWITIGGFVFFGVYEQASATL 273 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1592.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1592.4.1 >prot_P-wetherbeei_contig1592.4.1 ID=prot_P-wetherbeei_contig1592.4.1|Name=mRNA_P-wetherbeei_contig1592.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=284bp MSLRRALSPYLLHSRSLSAPPQAGGLAGTAVDVALYPLDTIKTRLQSAQGback to top mRNA from alignment at P-wetherbeei_contig1592:4153..5322+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1592.4.1 ID=mRNA_P-wetherbeei_contig1592.4.1|Name=mRNA_P-wetherbeei_contig1592.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1170bp|location=Sequence derived from alignment at P-wetherbeei_contig1592:4153..5322+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1592:4153..5322+ >mRNA_P-wetherbeei_contig1592.4.1 ID=mRNA_P-wetherbeei_contig1592.4.1|Name=mRNA_P-wetherbeei_contig1592.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=852bp|location=Sequence derived from alignment at P-wetherbeei_contig1592:4153..5322+ (Phaeothamnion wetherbeei SAG_119_79)back to top |