mRNA_P-wetherbeei_contig15900.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15900.1.1
Unique NamemRNA_P-wetherbeei_contig15900.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15900.1.1 vs. uniprot
Match: A0A4R1HBM9_9GAMM (Type II secretory pathway predicted ATPase ExeA n=1 Tax=Thiogranum longum TaxID=1537524 RepID=A0A4R1HBM9_9GAMM)

HSP 1 Score: 321 bits (822), Expect = 2.740e-105
Identity = 151/270 (55.93%), Postives = 208/270 (77.04%), Query Frame = 1
Query:    1 MYETFYGLKAKPFSLLPDPAYLFHSRQHEVALSLLEYAVNNQLTVSAMSGEVGSGKTTLIRELINKLGDGVTVGLISNTHRSFGNLMQWVCSAYSIPSRDKDKAELYHDFVDFLCAQYAEGRRTLLIVDEAQNLDAESLEEIRLLTNVNADEHLVMQLLLVGQPELHDLLKKHELRQLAQRIGVFARLGPLDEKETAEYVRHRMQVVGGSANLFHKNALRLIHWNSGGIPRVINTLCELALVYGYAEGKRRIDATLVADIARDRVGTGLY 810
            MYE+FY  + KPFSLLPD  +L+ S +H +AL+LLEY + NQ   + +SG++G+GKTTLIR+L+N++ D + VGLISNTH++FG+LMQW+  AY +P  DK+K ELY DF+DF+  +YA GRRT+LIVDEAQN+ AE+LEE+R+L+NVNAD+  V+Q++LVGQ EL D L++ +L Q AQRIGV   L PLDE+ET +Y+RHR +  GGS +LF + A   ++  +GG+PR+IN LC+  LVYGYAE +  IDA LV+D+ARD+   GL+
Sbjct:    1 MYESFYNFREKPFSLLPDSGFLYLSNKHRMALTLLEYGLMNQAGFTVISGDIGTGKTTLIRQLLNQIDDSIRVGLISNTHQTFGDLMQWIALAYDLPHHDKNKVELYQDFMDFIIKEYARGRRTVLIVDEAQNMSAETLEELRMLSNVNADKDQVLQIILVGQRELRDTLRRPDLVQFAQRIGVDYHLEPLDEQETIDYIRHRCEKAGGSIDLFTEKACHQVYEATGGVPRLINLLCDTTLVYGYAEQREHIDARLVSDVARDKQQGGLF 270          
BLAST of mRNA_P-wetherbeei_contig15900.1.1 vs. uniprot
Match: A0A351UXN2_9GAMM (General secretion pathway protein n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A351UXN2_9GAMM)

HSP 1 Score: 315 bits (807), Expect = 1.380e-104
Identity = 145/270 (53.70%), Postives = 209/270 (77.41%), Query Frame = 1
Query:    1 MYETFYGLKAKPFSLLPDPAYLFHSRQHEVALSLLEYAVNNQLTVSAMSGEVGSGKTTLIRELINKLGDGVTVGLISNTHRSFGNLMQWVCSAYSIPSRDKDKAELYHDFVDFLCAQYAEGRRTLLIVDEAQNLDAESLEEIRLLTNVNADEHLVMQLLLVGQPELHDLLKKHELRQLAQRIGVFARLGPLDEKETAEYVRHRMQVVGGSANLFHKNALRLIHWNSGGIPRVINTLCELALVYGYAEGKRRIDATLVADIARDRVGTGLY 810
            MY  +YG   KPF+L PDP +L+ S+QH+ AL++LEY +++Q  ++ ++GEVGSGKTTL+R ++ ++   +TVGLISN H +FG+L+QWV +A+ I +   DKA  Y  FVDFL  +Y+E RRT+LI+DEAQNLD ++LEE+RLL+N+NAD++L++QL+L+GQPEL ++L+K ELRQLAQR+ V  RL PL  KE+ +Y+RHR++V GGSANLF K A+ ++ + S G+PR+INTLC+ ALVYG+AE    ID  L+ D+ +D+V  G+Y
Sbjct:    1 MYTQYYGFNEKPFTLTPDPEFLYLSKQHQTALNMLEYGLHSQAGITVINGEVGSGKTTLVRRILQEVDQTLTVGLISNAHSAFGDLLQWVLNAFEIEAEGNDKASRYQAFVDFLIKEYSENRRTVLIIDEAQNLDVQTLEELRLLSNINADKYLLLQLILIGQPELLEVLRKPELRQLAQRVSVDYRLNPLKYKESVDYIRHRLRVAGGSANLFDKYAIAVVFYYSQGVPRLINTLCDFALVYGFAEEAESIDLALMLDVIKDKVKGGIY 270          
BLAST of mRNA_P-wetherbeei_contig15900.1.1 vs. uniprot
Match: A0A7R6W937_9GAMM (General secretion pathway protein A n=1 Tax=Methyloprofundus sp. TaxID=2020875 RepID=A0A7R6W937_9GAMM)

HSP 1 Score: 311 bits (798), Expect = 3.100e-103
Identity = 147/270 (54.44%), Postives = 207/270 (76.67%), Query Frame = 1
Query:    1 MYETFYGLKAKPFSLLPDPAYLFHSRQHEVALSLLEYAVNNQLTVSAMSGEVGSGKTTLIRELINKLGDGVTVGLISNTHRSFGNLMQWVCSAYSIPSRDKDKAELYHDFVDFLCAQYAEGRRTLLIVDEAQNLDAESLEEIRLLTNVNADEHLVMQLLLVGQPELHDLLKKHELRQLAQRIGVFARLGPLDEKETAEYVRHRMQVVGGSANLFHKNALRLIHWNSGGIPRVINTLCELALVYGYAEGKRRIDATLVADIARDRVGTGLY 810
            MY+ FY LK KPFSL PDPA+L+ S+QH++AL++L Y + +Q+ V+ +SGEVGSGKTTLIR+++  +G+ VTVGLISN H  FG+L++WV  A+ + +  +DKAELY    DFL  +Y+E RRT+LI+DEAQN D E+LEE+RLL+N+N+D+HLV+QL++VGQPEL DL+K  ELRQLAQR+ +  +L  L  KET  Y+RHR+ V GG  N F K AL    ++SGGIPR+INTLC+ ALVYG+A+ + +ID +L+  + +D++  G++
Sbjct:    1 MYKEFYHLKEKPFSLTPDPAFLYLSKQHQMALTMLNYGIQSQVGVTVISGEVGSGKTTLIRKILQSIGEDVTVGLISNAHSKFGSLLRWVMVAFDLHAEIQDKAELYQVLTDFLIKEYSENRRTVLIIDEAQNFDLETLEELRLLSNINSDKHLVLQLIIVGQPELLDLMKCPELRQLAQRVSIDYKLKALGYKETTAYIRHRLMVAGGDGNTFDKYALAATFYHSGGIPRLINTLCDFALVYGFADEQLQIDLSLMLSVIKDKLQGGIF 270          
BLAST of mRNA_P-wetherbeei_contig15900.1.1 vs. uniprot
Match: UPI001BC0688D (AAA family ATPase n=2 Tax=Methylococcaceae TaxID=403 RepID=UPI001BC0688D)

HSP 1 Score: 307 bits (786), Expect = 2.050e-101
Identity = 142/270 (52.59%), Postives = 209/270 (77.41%), Query Frame = 1
Query:    1 MYETFYGLKAKPFSLLPDPAYLFHSRQHEVALSLLEYAVNNQLTVSAMSGEVGSGKTTLIRELINKLGDGVTVGLISNTHRSFGNLMQWVCSAYSIPSRDKDKAELYHDFVDFLCAQYAEGRRTLLIVDEAQNLDAESLEEIRLLTNVNADEHLVMQLLLVGQPELHDLLKKHELRQLAQRIGVFARLGPLDEKETAEYVRHRMQVVGGSANLFHKNALRLIHWNSGGIPRVINTLCELALVYGYAEGKRRIDATLVADIARDRVGTGLY 810
            MY+ F+G K KPFSL PDP +L+ S+QH  AL++LEY +++Q  ++ ++GEVGSGKTTL+R ++ ++   +TVGLISN H +FG+L+QWV +A+ + +   DKA  Y  FVDFL ++Y + RRT+LI+DEAQNLD ++LEE+RLL+N+NAD++L++QL+LVGQPEL +L+++ ELRQLAQR+ V  RL PL  KET EY++HR+ V GG+ N+F K A+ +I++ S GIPR+INTLC+ +LVYG+AE  + +   LV D+ RD++  G++
Sbjct:    1 MYQDFFGFKEKPFSLTPDPDFLYLSKQHRTALNMLEYGLHSQAGITVINGEVGSGKTTLVRRILQEIDQDITVGLISNAHNAFGDLLQWVLNAFELDTSATDKASRYQTFVDFLVSEYGQNRRTVLIIDEAQNLDMQTLEELRLLSNINADKYLLLQLILVGQPELLELMQRPELRQLAQRVSVDYRLTPLKYKETLEYIQHRLAVAGGAPNVFDKYAMAVIYYYSQGIPRLINTLCDFSLVYGFAEEIQPLTMPLVLDVIRDKLQGGIF 270          
BLAST of mRNA_P-wetherbeei_contig15900.1.1 vs. uniprot
Match: A0A7C7G4E0_9GAMM (DUF2075 domain-containing protein n=1 Tax=Chromatiaceae bacterium TaxID=2049432 RepID=A0A7C7G4E0_9GAMM)

HSP 1 Score: 305 bits (780), Expect = 7.250e-101
Identity = 147/270 (54.44%), Postives = 201/270 (74.44%), Query Frame = 1
Query:    1 MYETFYGLKAKPFSLLPDPAYLFHSRQHEVALSLLEYAVNNQLTVSAMSGEVGSGKTTLIRELINKLGDGVTVGLISNTHRSFGNLMQWVCSAYSIPSRDKDKAELYHDFVDFLCAQYAEGRRTLLIVDEAQNLDAESLEEIRLLTNVNADEHLVMQLLLVGQPELHDLLKKHELRQLAQRIGVFARLGPLDEKETAEYVRHRMQVVGGSANLFHKNALRLIHWNSGGIPRVINTLCELALVYGYAEGKRRIDATLVADIARDRVGTGLY 810
            MYE+++G   KPFSLLPDP +L+ S++H++AL++LEY + NQ   + +SG VG+GKTTLIR L+N+L D +TVGLISN+H SFG L++WV  AY I +  K K E+Y  FVDF   +YA+G RT+LIVDEAQNL A++LEE+R+L+N+NAD+  V+Q+LLVGQ EL D LK+ ELRQ AQRI V   LGPL E ET  Y+ HR+++ GGS  LF ++A + +H ++GG PR+IN LC+  LVY YAE +  IDA LV ++A ++   GL+
Sbjct:    1 MYESYFGFSEKPFSLLPDPGFLYPSKKHKMALAMLEYGLLNQAGFTIISGAVGAGKTTLIRHLLNQLDDDLTVGLISNSHASFGELLEWVLLAYGIEAGAKSKVEMYRAFVDFTIQEYAKGNRTVLIVDEAQNLSADTLEELRMLSNINADKDQVLQVLLVGQQELRDTLKRPELRQFAQRISVDFHLGPLAEDETCGYIAHRLKIAGGSDTLFDQDACKAVHRHTGGTPRLINLLCDTTLVYAYAEQRTTIDAALVNEVAEEKKAGGLF 270          
BLAST of mRNA_P-wetherbeei_contig15900.1.1 vs. uniprot
Match: A0A3M1DXI1_9GAMM (General secretion pathway protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1DXI1_9GAMM)

HSP 1 Score: 301 bits (770), Expect = 4.350e-99
Identity = 140/268 (52.24%), Postives = 198/268 (73.88%), Query Frame = 1
Query:    1 MYETFYGLKAKPFSLLPDPAYLFHSRQHEVALSLLEYAVNNQLTVSAMSGEVGSGKTTLIRELINKLGDGVTVGLISNTHRSFGNLMQWVCSAYSIPSRDKDKAELYHDFVDFLCAQYAEGRRTLLIVDEAQNLDAESLEEIRLLTNVNADEHLVMQLLLVGQPELHDLLKKHELRQLAQRIGVFARLGPLDEKETAEYVRHRMQVVGGSANLFHKNALRLIHWNSGGIPRVINTLCELALVYGYAEGKRRIDATLVADIARDRVGTG 804
            MY  FYGL+ +PF+L PDP +L+  R+H  A +LLEY + NQ  ++ ++GE+G+GKTTL+R L+N+L +G  VGLISNTHR+FGNL++W+  A+ +P   + +A LY  FVDFL  +YA+G++TLLIVDEAQN+D  +LEE+R+++NVNAD+  V+QL+L GQPEL ++L++ EL Q AQR+ V   LGPL+ +ET  Y+RHR+ V GG   L    A R +H  SGGIPR+IN LC+LALVYG+A  +R + A LV ++ +DR+  G
Sbjct:    1 MYLDFYGLRERPFTLQPDPEFLYLGRRHSTAYTLLEYGICNQAPITVLTGEIGAGKTTLLRHLLNQLDEGTEVGLISNTHRAFGNLLEWISLAFDLPFEGQSEAALYRQFVDFLIRRYAQGQQTLLIVDEAQNMDPATLEELRVISNVNADKDQVLQLVLSGQPELREVLRRPELEQFAQRVAVDYHLGPLEAEETDAYIRHRLAVAGGDEELIEPAARRFVHHQSGGIPRLINNLCDLALVYGFAAQQRPVTAELVHEVVQDRIRNG 268          
BLAST of mRNA_P-wetherbeei_contig15900.1.1 vs. uniprot
Match: A0A257SYE0_9GAMM (General secretion pathway protein n=1 Tax=Chromatiales bacterium 21-64-14 TaxID=1970504 RepID=A0A257SYE0_9GAMM)

HSP 1 Score: 301 bits (771), Expect = 5.730e-99
Identity = 148/270 (54.81%), Postives = 197/270 (72.96%), Query Frame = 1
Query:    1 MYETFYGLKAKPFSLLPDPAYLFHSRQHEVALSLLEYAVNNQLTVSAMSGEVGSGKTTLIRELINKLGDGVTVGLISNTHRSFGNLMQWVCSAYSIPSRDKDKAELYHDFVDFLCAQYAEGRRTLLIVDEAQNLDAESLEEIRLLTNVNADEHLVMQLLLVGQPELHDLLKKHELRQLAQRIGVFARLGPLDEKETAEYVRHRMQVVGGSANLFHKNALRLIHWNSGGIPRVINTLCELALVYGYAEGKRRIDATLVADIARDRVGTGLY 810
            MYE+FYGL+ KPFSLLPDP +LF S +H +AL LLEY + NQ   + +SG +G+GKTTLIR L+N +G   TVGLISNTHRSFG+L+QW+  A++I  +  DK   Y  FVDF+  +YA+ RRT+LIVDEAQN+  E+LEE+R+L+NVNAD+  V+Q++LVGQP L D L++ +L Q AQRI V   L PL+  ET EY+RHR+   GG  +LF   A  ++H  S G+PR++N LC+ A+VYGYAE   RI+A LV D+ARD+   GL+
Sbjct:    1 MYESFYGLREKPFSLLPDPGFLFLSPKHRMALVLLEYGLMNQAGFTVISGGIGTGKTTLIRHLLNNIGRDTTVGLISNTHRSFGDLLQWIMLAFNIEDQGLDKVGRYRAFVDFMIREYAKSRRTVLIVDEAQNMAPETLEELRMLSNVNADKDQVLQVILVGQPGLRDTLRRADLEQFAQRIAVDYDLEPLEAHETREYIRHRLATAGGDPDLFEDEACAVVHEASRGVPRLVNLLCDTAMVYGYAEQAPRINAALVRDVARDKRKGGLF 270          
BLAST of mRNA_P-wetherbeei_contig15900.1.1 vs. uniprot
Match: A0A841HEZ3_9GAMM (Type II secretory pathway predicted ATPase ExeA n=1 Tax=Povalibacter uvarum TaxID=732238 RepID=A0A841HEZ3_9GAMM)

HSP 1 Score: 297 bits (760), Expect = 7.350e-98
Identity = 145/271 (53.51%), Postives = 201/271 (74.17%), Query Frame = 1
Query:    1 MYETFYGLKAKPFSLLPDPAYLFHSRQHEVALSLLEYAVNNQLTVSAMSGEVGSGKTTLIRELINKLGDGVTVGLISNTHRSFGNLMQWVCSAYSIPSRDKDKAELYHDFVDFLCAQYAEGRRTLLIVDEAQNLDAESLEEIRLLTNVNADEHLVMQLLLVGQPELHDLLKKHELRQLAQRIGVFARLGPLDEKETAEYVRHRMQVVGGSANLFHKNALRLIHWNSG-GIPRVINTLCELALVYGYAEGKRRIDATLVADIARDRVGTGLY 810
            MYE++YGL+ KPF+L+PDPA+L+ SR H+ A  +LEYAV N+   + ++GEVGSGKT L+R L+++LG  V VG+I+NT+ SFG L+QWVC A+ +P + KD AELY  FVDFL  +YA G+R LLIVDEAQNLD + LEE+R+L+NVNAD HLV+Q +LVGQPEL + L++ +LRQ AQRIG+   L  L  +E   YVRHR++V GG+ +L    A+ L  W+ G GIPR++N LCE AL++G+A+ + RID TL+  +  +R   G++
Sbjct:    1 MYESYYGLREKPFALVPDPAFLYPSRHHQFAAMMLEYAVMNRTGFALLTGEVGSGKTMLLRRLLSRLGPEVCVGMIANTNASFGKLLQWVCLAFDLPYQKKDDAELYQTFVDFLVERYAAGQRVLLIVDEAQNLDPQMLEELRVLSNVNADRHLVLQTILVGQPELRETLRRTDLRQFAQRIGIDYHLPALTLQEARMYVRHRLKVAGGAPDLIETEAIDLA-WSRGCGIPRLVNQLCETALIHGFADQRSRIDLTLMEQVVEERSAGGIF 270          
BLAST of mRNA_P-wetherbeei_contig15900.1.1 vs. uniprot
Match: A0A1F6UWI0_9PROT (General secretion pathway protein n=1 Tax=Candidatus Muproteobacteria bacterium RBG_16_60_9 TaxID=1817755 RepID=A0A1F6UWI0_9PROT)

HSP 1 Score: 295 bits (755), Expect = 6.710e-97
Identity = 138/270 (51.11%), Postives = 199/270 (73.70%), Query Frame = 1
Query:    1 MYETFYGLKAKPFSLLPDPAYLFHSRQHEVALSLLEYAVNNQLTVSAMSGEVGSGKTTLIRELINKLGDGVTVGLISNTHRSFGNLMQWVCSAYSIPSRDKDKAELYHDFVDFLCAQYAEGRRTLLIVDEAQNLDAESLEEIRLLTNVNADEHLVMQLLLVGQPELHDLLKKHELRQLAQRIGVFARLGPLDEKETAEYVRHRMQVVGGSANLFHKNALRLIHWNSGGIPRVINTLCELALVYGYAEGKRRIDATLVADIARDRVGTGLY 810
            MYE FYG   KPFSLLPDP +LF S +H+ AL++L++ + NQ   + ++GE+GSGKTTLIR+L++++G+ VTVGL+SNTHRSFG L+QWV  A+ +  RDK K ELY    DF+  +Y++ RRT+LI+DEAQNLD ++LEE+R+L+N+N+D+   +QL+LVGQP L + L++ E+ Q AQRI V   L  L  +ET +Y+RHR++V GG  NLF   A   +++ + G PR+IN+LCE +LV G+AE K+RID  +V D+ R+R   G++
Sbjct:    1 MYEGFYGFSEKPFSLLPDPTFLFLSPKHQKALTMLQFGMMNQAGFTVITGEIGSGKTTLIRQLLSEIGEDVTVGLVSNTHRSFGELLQWVLLAFGLEYRDKKKVELYQTLADFIVKEYSKDRRTVLIIDEAQNLDVDALEELRMLSNINSDKDQFLQLILVGQPHLRETLRRPEMHQFAQRIAVDYSLTTLTLEETWQYIRHRLKVAGGDPNLFDTKACAAVYYYTSGTPRLINSLCEQSLVVGFAEQKKRIDVDIVCDVVRERQKGGIF 270          
BLAST of mRNA_P-wetherbeei_contig15900.1.1 vs. uniprot
Match: A0A1B4V3X2_9GAMM (General secretion pathway protein n=1 Tax=Sulfurifustis variabilis TaxID=1675686 RepID=A0A1B4V3X2_9GAMM)

HSP 1 Score: 295 bits (755), Expect = 7.170e-97
Identity = 140/270 (51.85%), Postives = 199/270 (73.70%), Query Frame = 1
Query:    1 MYETFYGLKAKPFSLLPDPAYLFHSRQHEVALSLLEYAVNNQLTVSAMSGEVGSGKTTLIRELINKLGDGVTVGLISNTHRSFGNLMQWVCSAYSIPSRDKDKAELYHDFVDFLCAQYAEGRRTLLIVDEAQNLDAESLEEIRLLTNVNADEHLVMQLLLVGQPELHDLLKKHELRQLAQRIGVFARLGPLDEKETAEYVRHRMQVVGGSANLFHKNALRLIHWNSGGIPRVINTLCELALVYGYAEGKRRIDATLVADIARDRVGTGLY 810
            MYE++YG + KPFSLLPDPA+L+ S +H +AL++L+Y + NQ   + ++GE+GSGKTTLIR L+ ++ D  T+GL+SNTHR+FG L+QWV  A+ +  R+K K ELY    DF+  +Y++ RRT+LI+DEAQNL  E+LEE+R+L+NVNAD+  V+QL+LVGQP L D+L++ EL Q AQRI V   L  L+ +ET  YVRHR++V GG  NLF   A   +++ + G PR+IN LC+ ALVYG+AE K RIDA +V ++ R++   G++
Sbjct:    1 MYESYYGFREKPFSLLPDPAFLYMSDKHRMALTMLQYGLMNQAGFTVITGEIGSGKTTLIRRLLEEVDDWTTIGLVSNTHRNFGELLQWVLLAFGLEFREKKKVELYATLADFIVKEYSQDRRTVLIIDEAQNLSPEALEELRMLSNVNADKDQVLQLVLVGQPGLRDMLRRPELYQFAQRIAVDYNLRTLNLEETWGYVRHRLRVAGGDQNLFDTRACAAVYYYTRGTPRLINVLCDTALVYGFAEQKNRIDADIVCEVVREKTRGGIF 270          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15900.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4R1HBM9_9GAMM2.740e-10555.93Type II secretory pathway predicted ATPase ExeA n=... [more]
A0A351UXN2_9GAMM1.380e-10453.70General secretion pathway protein n=3 Tax=Gammapro... [more]
A0A7R6W937_9GAMM3.100e-10354.44General secretion pathway protein A n=1 Tax=Methyl... [more]
UPI001BC0688D2.050e-10152.59AAA family ATPase n=2 Tax=Methylococcaceae TaxID=4... [more]
A0A7C7G4E0_9GAMM7.250e-10154.44DUF2075 domain-containing protein n=1 Tax=Chromati... [more]
A0A3M1DXI1_9GAMM4.350e-9952.24General secretion pathway protein n=1 Tax=Gammapro... [more]
A0A257SYE0_9GAMM5.730e-9954.81General secretion pathway protein n=1 Tax=Chromati... [more]
A0A841HEZ3_9GAMM7.350e-9853.51Type II secretory pathway predicted ATPase ExeA n=... [more]
A0A1F6UWI0_9PROT6.710e-9751.11General secretion pathway protein n=1 Tax=Candidat... [more]
A0A1B4V3X2_9GAMM7.170e-9751.85General secretion pathway protein n=1 Tax=Sulfurif... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15900contigP-wetherbeei_contig15900:79..888 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1163617.SCD_n01330
PFAMsAAA_22
Model size810
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue8.32e-94
EggNOG OGsCOG3267@1|root,COG3267@2|Bacteria,1MU3G@1224|Proteobacteria,2VIK1@28216|Betaproteobacteria
DescriptionSMART AAA ATPase
Cds size810
COG categoryU
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186070.619818-CDS-P-wetherbeei_contig15900:78..8881683186070.619818-CDS-P-wetherbeei_contig15900:78..888Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15900 79..888 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15900.1.1prot_P-wetherbeei_contig15900.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15900 79..888 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15900.1.1

>prot_P-wetherbeei_contig15900.1.1 ID=prot_P-wetherbeei_contig15900.1.1|Name=mRNA_P-wetherbeei_contig15900.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=270bp
MYETFYGLKAKPFSLLPDPAYLFHSRQHEVALSLLEYAVNNQLTVSAMSG
EVGSGKTTLIRELINKLGDGVTVGLISNTHRSFGNLMQWVCSAYSIPSRD
KDKAELYHDFVDFLCAQYAEGRRTLLIVDEAQNLDAESLEEIRLLTNVNA
DEHLVMQLLLVGQPELHDLLKKHELRQLAQRIGVFARLGPLDEKETAEYV
RHRMQVVGGSANLFHKNALRLIHWNSGGIPRVINTLCELALVYGYAEGKR
RIDATLVADIARDRVGTGLY
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mRNA from alignment at P-wetherbeei_contig15900:79..888-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15900.1.1 ID=mRNA_P-wetherbeei_contig15900.1.1|Name=mRNA_P-wetherbeei_contig15900.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=810bp|location=Sequence derived from alignment at P-wetherbeei_contig15900:79..888- (Phaeothamnion wetherbeei SAG_119_79)
ATGTACGAGACCTTCTATGGACTGAAGGCCAAGCCTTTCAGTCTGCTGCC GGACCCGGCCTACTTGTTCCATAGCCGCCAGCATGAGGTGGCATTGTCGC TGCTGGAATACGCTGTCAATAATCAGCTCACGGTGTCGGCCATGAGCGGC GAAGTAGGGTCGGGTAAAACCACCTTGATCCGCGAGCTGATCAACAAGCT CGGTGATGGCGTCACGGTCGGTCTCATCTCCAACACCCATCGTTCTTTCG GCAATCTCATGCAATGGGTGTGCTCGGCCTATAGCATTCCCAGCCGTGAC AAGGACAAGGCCGAGCTCTATCACGATTTCGTGGATTTTCTGTGTGCGCA ATACGCCGAGGGCCGCCGCACGCTGCTGATCGTCGACGAGGCGCAGAATC TCGATGCCGAGTCGCTGGAGGAAATCCGGCTGTTGACCAACGTCAATGCC GACGAACATCTGGTCATGCAGTTATTACTGGTCGGCCAGCCCGAGTTACA CGATTTGTTGAAAAAGCATGAACTGCGCCAGCTTGCCCAGCGCATTGGCG TATTCGCCCGCCTGGGGCCCTTGGACGAAAAGGAAACCGCCGAATATGTG CGGCATCGCATGCAGGTGGTGGGCGGCAGCGCTAATCTGTTTCACAAGAA TGCGCTGCGCCTGATCCATTGGAACAGCGGCGGTATACCGCGCGTCATCA ACACCCTGTGCGAACTGGCGCTGGTGTATGGCTATGCCGAGGGCAAGCGC CGCATCGATGCGACCCTGGTCGCCGACATTGCGCGCGACCGCGTCGGCAC GGGACTGTAT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15900:79..888-

>mRNA_P-wetherbeei_contig15900.1.1 ID=mRNA_P-wetherbeei_contig15900.1.1|Name=mRNA_P-wetherbeei_contig15900.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=810bp|location=Sequence derived from alignment at P-wetherbeei_contig15900:79..888- (Phaeothamnion wetherbeei SAG_119_79)
ATGTACGAGACCTTCTATGGACTGAAGGCCAAGCCTTTCAGTCTGCTGCC
GGACCCGGCCTACTTGTTCCATAGCCGCCAGCATGAGGTGGCATTGTCGC
TGCTGGAATACGCTGTCAATAATCAGCTCACGGTGTCGGCCATGAGCGGC
GAAGTAGGGTCGGGTAAAACCACCTTGATCCGCGAGCTGATCAACAAGCT
CGGTGATGGCGTCACGGTCGGTCTCATCTCCAACACCCATCGTTCTTTCG
GCAATCTCATGCAATGGGTGTGCTCGGCCTATAGCATTCCCAGCCGTGAC
AAGGACAAGGCCGAGCTCTATCACGATTTCGTGGATTTTCTGTGTGCGCA
ATACGCCGAGGGCCGCCGCACGCTGCTGATCGTCGACGAGGCGCAGAATC
TCGATGCCGAGTCGCTGGAGGAAATCCGGCTGTTGACCAACGTCAATGCC
GACGAACATCTGGTCATGCAGTTATTACTGGTCGGCCAGCCCGAGTTACA
CGATTTGTTGAAAAAGCATGAACTGCGCCAGCTTGCCCAGCGCATTGGCG
TATTCGCCCGCCTGGGGCCCTTGGACGAAAAGGAAACCGCCGAATATGTG
CGGCATCGCATGCAGGTGGTGGGCGGCAGCGCTAATCTGTTTCACAAGAA
TGCGCTGCGCCTGATCCATTGGAACAGCGGCGGTATACCGCGCGTCATCA
ACACCCTGTGCGAACTGGCGCTGGTGTATGGCTATGCCGAGGGCAAGCGC
CGCATCGATGCGACCCTGGTCGCCGACATTGCGCGCGACCGCGTCGGCAC
GGGACTGTAT
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