mRNA_P-wetherbeei_contig15895.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15895.1.1
Unique NamemRNA_P-wetherbeei_contig15895.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15895.1.1 vs. uniprot
Match: A0A537KX48_9PROT (PQQ-dependent sugar dehydrogenase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537KX48_9PROT)

HSP 1 Score: 380 bits (977), Expect = 1.010e-129
Identity = 178/250 (71.20%), Postives = 203/250 (81.20%), Query Frame = 1
Query:   19 AAILAATSLSATAQTYTSSAGDLKVETVVGGLANPWSLAFLPDGRMLVTEKPGRLRIATRDGKLSHPVAGVPTVFAVSQGGLHDVILDRAFAQNNTIYICYAEPVSGGGRTALLRAKLVDEATPRLDDVTVIFRQEGPLSSGGHFGCRIVQTPDNNLFLTTGDHFRHRDEAQNLGNHLGKLIRIAPDGSVPRDNPFVGRSDAKPEIWSYGHRNMQGAALHPTTGKVWEHEHGPRGGDEVNIPEKGKNYGW 768
            AA+ A  +L A+AQT+ SSAG L VET+  GL +PW LAFLPDG+MLVTE+ GRLR+ TRDG L+ PV+GVP V A  QGGLHDV LDR FA N TIY+CYAEP +GGGRTA+ R +L D   P+L  V VIFRQEGPLS G H+GCRIVQ  D NL+LT GDHF HRDEAQNL NHLGK++R+ PDG VP+DNPFVGRSDAKPEIWSYGHRN QGAALHP TG++WEHEHGP+GGDEVNIP  GKNYGW
Sbjct:    7 AALAAMVALPASAQTFPSSAGPLTVETIARGLDHPWGLAFLPDGKMLVTERSGRLRVVTRDGALAPPVSGVPPVRASGQGGLHDVALDRDFASNRTIYLCYAEPAAGGGRTAMARGRLTDGEAPQLAHVKVIFRQEGPLSGGNHYGCRIVQGRDGNLWLTMGDHFTHRDEAQNLANHLGKIVRVTPDGDVPKDNPFVGRSDAKPEIWSYGHRNSQGAALHPQTGRLWEHEHGPKGGDEVNIPLAGKNYGW 256          
BLAST of mRNA_P-wetherbeei_contig15895.1.1 vs. uniprot
Match: A0A1Q7BAY8_9PROT (GSDH domain-containing protein n=1 Tax=Alphaproteobacteria bacterium 13_2_20CM_2_64_7 TaxID=1803507 RepID=A0A1Q7BAY8_9PROT)

HSP 1 Score: 379 bits (973), Expect = 4.820e-129
Identity = 180/251 (71.71%), Postives = 207/251 (82.47%), Query Frame = 1
Query:   16 AAAILAATSLSATAQTYTSSAGDLKVETVVGGLANPWSLAFLPDGRMLVTEKPGRLRIATRDGKLSHPVAGVPTVFAVSQGGLHDVILDRAFAQNNTIYICYAEPVSGGGRTALLRAKLVDEATPRLDDVTVIFRQEGPLSSGGHFGCRIVQTPDNNLFLTTGDHFRHRDEAQNLGNHLGKLIRIAPDGSVPRDNPFVGRSDAKPEIWSYGHRNMQGAALHPTTGKVWEHEHGPRGGDEVNIPEKGKNYGW 768
            A A++A     A AQ + SSAGDL ++T+   L +PW+LAFLPDGR+LVTE+PGR+R+  +DG LS P+ GVP VFA  QGGLHDV+LDR+FAQN+T+Y+CYAEPV G GRTAL RA+LVDE T RLD + VIFRQ GPLSSG HFGCRIVQT D+NLFLTTGDHF  RD+AQNLG+ LGK+IRI PDGSVP DNPFVGR+ AKPEIWSYGHRN QG  L P TGK+WEHEHGPRGGDEVNI EKGKNYGW
Sbjct:    9 AGALIAGGCAPAGAQVFHSSAGDLAMQTMARALDHPWALAFLPDGRILVTERPGRMRLIAKDGTLSPPLGGVPKVFASGQGGLHDVVLDRSFAQNHTVYLCYAEPVDGRGRTALARARLVDEGTTRLDALQVIFRQAGPLSSGNHFGCRIVQTADDNLFLTTGDHFTTRDQAQNLGDDLGKIIRIRPDGSVPPDNPFVGRAGAKPEIWSYGHRNAQGLVLDPATGKLWEHEHGPRGGDEVNIIEKGKNYGW 259          
BLAST of mRNA_P-wetherbeei_contig15895.1.1 vs. uniprot
Match: A0A833GCI5_9HYPH (PQQ-dependent sugar dehydrogenase n=1 Tax=Pseudorhodoplanes sp. TaxID=1934341 RepID=A0A833GCI5_9HYPH)

HSP 1 Score: 376 bits (965), Expect = 7.910e-128
Identity = 171/237 (72.15%), Postives = 199/237 (83.97%), Query Frame = 1
Query:   58 QTYTSSAGDLKVETVVGGLANPWSLAFLPDGRMLVTEKPGRLRIATRDGKLSHPVAGVPTVFAVSQGGLHDVILDRAFAQNNTIYICYAEPVSGGGRTALLRAKLVDEATPRLDDVTVIFRQEGPLSSGGHFGCRIVQTPDNNLFLTTGDHFRHRDEAQNLGNHLGKLIRIAPDGSVPRDNPFVGRSDAKPEIWSYGHRNMQGAALHPTTGKVWEHEHGPRGGDEVNIPEKGKNYGW 768
            QT+ ++AG+L VET+ GGLANPW+LAFLPDGRMLVTE+PGRLRI TRDGKLS PV G+P + A  QGGL DV+ DR FAQ+ TIY C+AEP+SGG RTAL RA+L+    PRL+D+TVIFRQEGP S+G HFGCRIVQTPDNNLFLTTGDH     EAQNL NH+GK++R+ PDGSVP DNPFV R  A+PEIWSYGHRN QGAALHP +GK+W HEHGPRGGDE+NIP+ G+NYGW
Sbjct:   25 QTFRAAAGNLNVETIAGGLANPWALAFLPDGRMLVTERPGRLRIVTRDGKLSPPVTGLPPIAARGQGGLLDVVPDRGFAQDATIYFCFAEPMSGGARTALARARLIAAEAPRLEDLTVIFRQEGPPSTGRHFGCRIVQTPDNNLFLTTGDHGSESREAQNLSNHIGKIVRVRPDGSVPADNPFVNREGARPEIWSYGHRNAQGAALHPVSGKLWMHEHGPRGGDEINIPQAGRNYGW 261          
BLAST of mRNA_P-wetherbeei_contig15895.1.1 vs. uniprot
Match: A0A537VF61_9PROT (PQQ-dependent sugar dehydrogenase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537VF61_9PROT)

HSP 1 Score: 372 bits (954), Expect = 3.350e-126
Identity = 176/238 (73.95%), Postives = 195/238 (81.93%), Query Frame = 1
Query:   55 AQTYTSSAGDLKVETVVGGLANPWSLAFLPDGRMLVTEKPGRLRIATRDGKLSHPVAGVPTVFAVSQGGLHDVILDRAFAQNNTIYICYAEPVSGGGRTALLRAKLVDEATPRLDDVTVIFRQEGPLSSGGHFGCRIVQTPDNNLFLTTGDHFRHRDEAQNLGNHLGKLIRIAPDGSVPRDNPFVGRSDAKPEIWSYGHRNMQGAALHPTTGKVWEHEHGPRGGDEVNIPEKGKNYGW 768
            AQ + SS+GD+ VETV   L +PW++AFLP GRMLVTE+PGR+RI  +DG LS  +AGVP VFA  QGGLHDV LDR FAQN+TIY CYAEPV G GRT+L RA+LVDE T RLD V VIFRQ GPLSSG HFGCRIVQ PD+NLFLTTGDHF  RD+AQNL N LGK+IRI  DGSVP DNPFVG+  AKPEIWSYGHRN QG A HP TGK+WEHEHGPRGGDE+NI EKGKNYGW
Sbjct:   22 AQVFHSSSGDVAVETVAKNLDHPWAIAFLPGGRMLVTERPGRMRIVAKDGALSPALAGVPKVFASGQGGLHDVALDRGFAQNHTIYFCYAEPVEGRGRTSLARARLVDEGTSRLDAVEVIFRQAGPLSSGNHFGCRIVQAPDDNLFLTTGDHFTTRDQAQNLTNDLGKIIRIRSDGSVPPDNPFVGKPPAKPEIWSYGHRNPQGLAFHPMTGKLWEHEHGPRGGDEINIIEKGKNYGW 259          
BLAST of mRNA_P-wetherbeei_contig15895.1.1 vs. uniprot
Match: A0A537RUU1_9PROT (PQQ-dependent sugar dehydrogenase n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537RUU1_9PROT)

HSP 1 Score: 367 bits (941), Expect = 3.150e-124
Identity = 177/251 (70.52%), Postives = 204/251 (81.27%), Query Frame = 1
Query:   16 AAAILAATSLSATAQTYTSSAGDLKVETVVGGLANPWSLAFLPDGRMLVTEKPGRLRIATRDGKLSHPVAGVPTVFAVSQGGLHDVILDRAFAQNNTIYICYAEPVSGGGRTALLRAKLVDEATPRLDDVTVIFRQEGPLSSGGHFGCRIVQTPDNNLFLTTGDHFRHRDEAQNLGNHLGKLIRIAPDGSVPRDNPFVGRSDAKPEIWSYGHRNMQGAALHPTTGKVWEHEHGPRGGDEVNIPEKGKNYGW 768
            A A++AA  + A+ Q + SSAGD  V+T   GL +PW+LAFLPD R+LVTE+PGR+RI   DG LS  +AGVP VFA  QGGL D++LDR+FAQN+TIY CYAEPV GG RTAL RA+L+DE TPRL+ V VIF Q GPLSSG HFGCRIVQTP++NLFLT G+HF  RD+AQNLGNHLGK+IRI  DGS P DNPFVGR+ AKPEIWSYGHRN QG ALHP TGK+WEHEHGPRGGDE+NI  KGKNYGW
Sbjct:    9 AGALVAAGWVPASGQVFHSSAGDFVVQTAAKGLDHPWALAFLPDRRVLVTERPGRMRIIAEDGTLSPALAGVPKVFAAGQGGLLDLMLDRSFAQNHTIYFCYAEPVDGGARTALARARLLDEGTPRLEAVEVIFHQTGPLSSGNHFGCRIVQTPNDNLFLTLGEHFTTRDQAQNLGNHLGKIIRIRSDGSAPADNPFVGRA-AKPEIWSYGHRNPQGLALHPMTGKLWEHEHGPRGGDEINIIAKGKNYGW 258          
BLAST of mRNA_P-wetherbeei_contig15895.1.1 vs. uniprot
Match: A0A537NPW2_9PROT (PQQ-dependent sugar dehydrogenase (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NPW2_9PROT)

HSP 1 Score: 366 bits (940), Expect = 3.650e-124
Identity = 169/238 (71.01%), Postives = 193/238 (81.09%), Query Frame = 1
Query:   55 AQTYTSSAGDLKVETVVGGLANPWSLAFLPDGRMLVTEKPGRLRIATRDGKLSHPVAGVPTVFAVSQGGLHDVILDRAFAQNNTIYICYAEPVSGGGRTALLRAKLVDEATPRLDDVTVIFRQEGPLSSGGHFGCRIVQTPDNNLFLTTGDHFRHRDEAQNLGNHLGKLIRIAPDGSVPRDNPFVGRSDAKPEIWSYGHRNMQGAALHPTTGKVWEHEHGPRGGDEVNIPEKGKNYGW 768
            AQTY S+AG++ V+T   G  +PW+L FLPDGR+LVTE+PGR+RI   DG LS  ++GVP VFA  QGGLHDVILDRAF  N+TIY CYAEP SGG RTAL RA+L++E TPRL D+ VIFRQEGPLSSG HFGCRIVQ  DNNLFLT G+HF  RD+AQNL NHLGK++RI PDGSVP DNPFV    AKPEIWSYGHRN QG ALHP T ++WEHEHGPRGGDE+N+ EK KNYGW
Sbjct:   26 AQTYPSAAGNIMVQTFAKGFEHPWALGFLPDGRILVTERPGRMRIVATDGALSPALSGVPKVFASGQGGLHDVILDRAFTDNHTIYFCYAEPASGGARTALARARLIEEPTPRLADLAVIFRQEGPLSSGNHFGCRIVQAQDNNLFLTLGEHFTTRDQAQNLTNHLGKIVRIRPDGSVPPDNPFVDTPGAKPEIWSYGHRNPQGLALHPATARLWEHEHGPRGGDEINLIEKRKNYGW 263          
BLAST of mRNA_P-wetherbeei_contig15895.1.1 vs. uniprot
Match: A0A6N7GUL1_9HYPH (PQQ-dependent sugar dehydrogenase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GUL1_9HYPH)

HSP 1 Score: 366 bits (939), Expect = 7.490e-124
Identity = 171/231 (74.03%), Postives = 190/231 (82.25%), Query Frame = 1
Query:   76 AGDLKVETVVGGLANPWSLAFLPDGRMLVTEKPGRLRIATRDGKLSHPVAGVPTVFAVSQGGLHDVILDRAFAQNNTIYICYAEPVSGGGRTALLRAKLVDEATPRLDDVTVIFRQEGPLSSGGHFGCRIVQTPDNNLFLTTGDHFRHRDEAQNLGNHLGKLIRIAPDGSVPRDNPFVGRSDAKPEIWSYGHRNMQGAALHPTTGKVWEHEHGPRGGDEVNIPEKGKNYGW 768
            A +L VETV  GL+ PW++AFLP+GRMLVTE+PGR+RI  + G LS PVAGVP VFA SQGGLHDVI+DR FA N TIY C+A P  GG +TA+ RAKLVD   PRLD+V VIF+QEGP SSG HFGCRIVQ  D NLFLTTGDHFR RDEAQNLGNHLGKLIRI PDG+ P DNPFV R+ AKPEIWSYGHRNMQGA LHP +GK+W HEHG RGGDE+NIPE GKNYGW
Sbjct:   32 ADNLTVETVASGLSFPWAIAFLPNGRMLVTERPGRMRIVAKGGNLSPPVAGVPPVFARSQGGLHDVIVDRDFANNGTIYFCFAMPAGGGAQTAMARAKLVDGDPPRLDNVKVIFQQEGPPSSGNHFGCRIVQARDGNLFLTTGDHFRFRDEAQNLGNHLGKLIRITPDGAAPPDNPFVKRAGAKPEIWSYGHRNMQGATLHPQSGKLWTHEHGARGGDEINIPEAGKNYGW 262          
BLAST of mRNA_P-wetherbeei_contig15895.1.1 vs. uniprot
Match: A0A537T7L3_9PROT (PQQ-dependent sugar dehydrogenase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537T7L3_9PROT)

HSP 1 Score: 365 bits (938), Expect = 8.990e-124
Identity = 175/241 (72.61%), Postives = 196/241 (81.33%), Query Frame = 1
Query:   46 SATAQTYTSSAGDLKVETVVGGLANPWSLAFLPDGRMLVTEKPGRLRIATRDGKLSHPVAGVPTVFAVSQGGLHDVILDRAFAQNNTIYICYAEPVSGGGRTALLRAKLVDEATPRLDDVTVIFRQEGPLSSGGHFGCRIVQTPDNNLFLTTGDHFRHRDEAQNLGNHLGKLIRIAPDGSVPRDNPFVGRSDAKPEIWSYGHRNMQGAALHPTTGKVWEHEHGPRGGDEVNIPEKGKNYGW 768
            SA+AQ + SSAGDL V+T   GL +PW+LAFLPD RMLVTE+PGR+RI   DG LS  +AGVP VFA  QGGL DV+LDR+FAQN+TIY CYAEPV G  RTAL RA+L+ E   R++ V VIFRQ GP SSG HFGCRIVQTPD+NLFLTTGDHF  RD+AQ LGN LGK+IRI PDGS P DNPFVGR+ A+P IWSYGHRN QG ALHP TGK+WEHEHGPRGGDEVNI EKGKNYGW
Sbjct:   18 SASAQVFHSSAGDLVVQTAANGLDHPWALAFLPDRRMLVTERPGRMRIVGEDGTLSPALAGVPKVFASGQGGLLDVVLDRSFAQNHTIYFCYAEPVEGRARTALARARLIAEGRARIEAVEVIFRQAGPFSSGNHFGCRIVQTPDDNLFLTTGDHFTTRDQAQILGNDLGKIIRIRPDGSAPPDNPFVGRAAAEPAIWSYGHRNSQGLALHPVTGKLWEHEHGPRGGDEVNIIEKGKNYGW 258          
BLAST of mRNA_P-wetherbeei_contig15895.1.1 vs. uniprot
Match: A0A1W6ZSV4_9HYPH (GSDH domain-containing protein n=1 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZSV4_9HYPH)

HSP 1 Score: 365 bits (936), Expect = 1.810e-123
Identity = 174/253 (68.77%), Postives = 204/253 (80.63%), Query Frame = 1
Query:   13 LAAAILAATSLSATAQ-TYTSSAGDLKVETVVGGLANPWSLAFLPDGRMLVTEKPGRLRIATRDGKLSHPVAGVPTVFAVSQGGLHDVILDRAFAQNNTIYICYAEPVSGGGRTALLRAKLVDEATPRLDDVTVIFRQEGPLSSGGHFGCRIVQTPDNNLFLTTGDHFRHRDEAQNLGNHLGKLIRIAPDGSVPRDNPFVGRSDAKPEIWSYGHRNMQGAALHPTTGKVWEHEHGPRGGDEVNIPEKGKNYGW 768
            +A ++L A +L A AQ  + +  GD++V+T+V GL+NPW+LAFLPDG ML+TEKPGR+RIATRDGKLS PV GVP V A +QGGL DVILDR F +NNTIY CY++PVSGG +T+L RA+L     P+L DV  IF+QEGP S+G HFGCRIVQ  D NLFLTTGDHF  R+ AQ L NHLGK+IRIAPDGSVP+DNPF G+ DAKPEIWSYGHRN QGA LHP TGK+W HEHGPRGGDE+NIP  GKNYGW
Sbjct:    6 IAGSLLLAAALPAHAQQAFKTETGDVRVDTIVSGLSNPWALAFLPDGHMLITEKPGRMRIATRDGKLSPPVGGVPKVVAQNQGGLLDVILDRDFEKNNTIYFCYSDPVSGGAQTSLARARLDAGEKPQLVDVRRIFQQEGPPSNGLHFGCRIVQARDGNLFLTTGDHFSSRNSAQTLDNHLGKVIRIAPDGSVPKDNPFAGKQDAKPEIWSYGHRNSQGAVLHPVTGKLWMHEHGPRGGDEINIPNAGKNYGW 258          
BLAST of mRNA_P-wetherbeei_contig15895.1.1 vs. uniprot
Match: A0A3A0F4G9_9PROT (GSDH domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A3A0F4G9_9PROT)

HSP 1 Score: 364 bits (934), Expect = 4.300e-123
Identity = 171/233 (73.39%), Postives = 193/233 (82.83%), Query Frame = 1
Query:   70 SSAGDLKVETVVGGLANPWSLAFLPDGRMLVTEKPGRLRIATRDGKLSHPVAGVPTVFAVSQGGLHDVILDRAFAQNNTIYICYAEPVSGGGRTALLRAKLVDEATPRLDDVTVIFRQEGPLSSGGHFGCRIVQTPDNNLFLTTGDHFRHRDEAQNLGNHLGKLIRIAPDGSVPRDNPFVGRSDAKPEIWSYGHRNMQGAALHPTTGKVWEHEHGPRGGDEVNIPEKGKNYGW 768
            SSAG LKVET+ G L++PWSLAFLPDGRML+TE+PGRLRI TR+G++S  + GVP V A  QGGL DVILDR +AQN TIY C+AE   GGGRTAL RA+L+D   PRLDDV VIFRQ+G LSSG H+GCRI Q  D  LFLTTGDHF  RDEAQNLGNHLGKLIRIAPDG+VP+DNPFVGR+ AKPEIWSYGHRN Q  A HPT+G++WE EHGPRGGDEVNI  KG+NYGW
Sbjct:   28 SSAGPLKVETIAGNLSHPWSLAFLPDGRMLITERPGRLRIVTREGQVSPSLPGVPPVSASGQGGLLDVILDRDYAQNATIYFCFAEQADGGGRTALARARLIDGTAPRLDDVKVIFRQDGRLSSGNHYGCRIAQATDGTLFLTTGDHFHSRDEAQNLGNHLGKLIRIAPDGTVPQDNPFVGRTGAKPEIWSYGHRNPQSLAFHPTSGELWEIEHGPRGGDEVNIIGKGRNYGW 260          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15895.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A537KX48_9PROT1.010e-12971.20PQQ-dependent sugar dehydrogenase n=1 Tax=Alphapro... [more]
A0A1Q7BAY8_9PROT4.820e-12971.71GSDH domain-containing protein n=1 Tax=Alphaproteo... [more]
A0A833GCI5_9HYPH7.910e-12872.15PQQ-dependent sugar dehydrogenase n=1 Tax=Pseudorh... [more]
A0A537VF61_9PROT3.350e-12673.95PQQ-dependent sugar dehydrogenase n=1 Tax=Alphapro... [more]
A0A537RUU1_9PROT3.150e-12470.52PQQ-dependent sugar dehydrogenase n=3 Tax=Alphapro... [more]
A0A537NPW2_9PROT3.650e-12471.01PQQ-dependent sugar dehydrogenase (Fragment) n=1 T... [more]
A0A6N7GUL1_9HYPH7.490e-12474.03PQQ-dependent sugar dehydrogenase n=1 Tax=Hyphomic... [more]
A0A537T7L3_9PROT8.990e-12472.61PQQ-dependent sugar dehydrogenase n=1 Tax=Alphapro... [more]
A0A1W6ZSV4_9HYPH1.810e-12368.77GSDH domain-containing protein n=1 Tax=Pseudorhodo... [more]
A0A3A0F4G9_9PROT4.300e-12373.39GSDH domain-containing protein n=1 Tax=Proteobacte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15895contigP-wetherbeei_contig15895:794..1561 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1429916.X566_04865
Preferred nameyliI
PFAMsGSDH
Model size768
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00066
KEGG koko:K00117,ko:K21430
KEGG ReactionR06620
KEGG Pathwayko00030,ko01100,ko01110,ko01130,map00030,map01100,map01110,map01130
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005509,GO:0005575,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016901,GO:0019842,GO:0030288,GO:0030313,GO:0031406,GO:0031975,GO:0036094,GO:0042597,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0044464,GO:0046872,GO:0048037,GO:0048038,GO:0055114,GO:0070968,GO:0097159,GO:1901363
Exons1
Evalue1.45e-122
EggNOG OGsCOG2133@1|root,COG2133@2|Bacteria,1MV2E@1224|Proteobacteria,2TR47@28211|Alphaproteobacteria,3JTX8@41294|Bradyrhizobiaceae
EC1.1.5.2
DescriptionGlucose / Sorbosone dehydrogenase
Cds size768
COG categoryG
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186070.2968466-CDS-P-wetherbeei_contig15895:793..15611683186070.2968466-CDS-P-wetherbeei_contig15895:793..1561Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15895 794..1561 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15895.1.1prot_P-wetherbeei_contig15895.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15895 794..1561 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15895.1.1

>prot_P-wetherbeei_contig15895.1.1 ID=prot_P-wetherbeei_contig15895.1.1|Name=mRNA_P-wetherbeei_contig15895.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=256bp
MKLSLAAAILAATSLSATAQTYTSSAGDLKVETVVGGLANPWSLAFLPDG
RMLVTEKPGRLRIATRDGKLSHPVAGVPTVFAVSQGGLHDVILDRAFAQN
NTIYICYAEPVSGGGRTALLRAKLVDEATPRLDDVTVIFRQEGPLSSGGH
FGCRIVQTPDNNLFLTTGDHFRHRDEAQNLGNHLGKLIRIAPDGSVPRDN
PFVGRSDAKPEIWSYGHRNMQGAALHPTTGKVWEHEHGPRGGDEVNIPEK
GKNYGW
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mRNA from alignment at P-wetherbeei_contig15895:794..1561+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15895.1.1 ID=mRNA_P-wetherbeei_contig15895.1.1|Name=mRNA_P-wetherbeei_contig15895.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=768bp|location=Sequence derived from alignment at P-wetherbeei_contig15895:794..1561+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAACTCTCCCTCGCCGCCGCCATCCTCGCCGCCACCTCGCTGTCCGC CACCGCCCAGACCTACACGTCGTCCGCAGGCGATCTGAAAGTCGAGACCG TCGTCGGCGGGCTCGCCAATCCATGGTCGCTCGCGTTCCTGCCGGACGGC CGTATGCTGGTGACGGAGAAGCCCGGCCGGCTGCGCATCGCGACACGCGA CGGCAAGCTCTCGCATCCGGTTGCGGGCGTACCGACGGTGTTCGCTGTGA GCCAGGGCGGCCTGCACGACGTCATCCTCGACCGCGCCTTCGCGCAGAAC AACACGATCTACATCTGCTACGCCGAGCCGGTGAGCGGCGGCGGCCGCAC CGCGCTTCTGCGCGCGAAGCTCGTCGATGAAGCCACCCCACGCCTCGACG ACGTGACGGTGATCTTCCGCCAGGAAGGCCCGCTTTCGAGCGGCGGGCAT TTCGGCTGCCGCATCGTGCAGACGCCGGACAACAACCTCTTCCTTACGAC GGGCGACCACTTCCGCCATCGCGACGAGGCGCAGAACCTTGGCAACCATC TCGGCAAGCTGATCCGCATCGCGCCGGATGGTTCGGTGCCGCGCGACAAT CCCTTTGTCGGCCGCAGCGATGCCAAACCTGAAATCTGGTCCTACGGCCA CCGCAACATGCAGGGCGCGGCGCTGCACCCCACGACCGGCAAAGTCTGGG AGCACGAACACGGCCCGCGCGGCGGCGACGAGGTGAACATCCCCGAGAAG GGCAAGAACTACGGCTGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15895:794..1561+

>mRNA_P-wetherbeei_contig15895.1.1 ID=mRNA_P-wetherbeei_contig15895.1.1|Name=mRNA_P-wetherbeei_contig15895.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=768bp|location=Sequence derived from alignment at P-wetherbeei_contig15895:794..1561+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAACTCTCCCTCGCCGCCGCCATCCTCGCCGCCACCTCGCTGTCCGC
CACCGCCCAGACCTACACGTCGTCCGCAGGCGATCTGAAAGTCGAGACCG
TCGTCGGCGGGCTCGCCAATCCATGGTCGCTCGCGTTCCTGCCGGACGGC
CGTATGCTGGTGACGGAGAAGCCCGGCCGGCTGCGCATCGCGACACGCGA
CGGCAAGCTCTCGCATCCGGTTGCGGGCGTACCGACGGTGTTCGCTGTGA
GCCAGGGCGGCCTGCACGACGTCATCCTCGACCGCGCCTTCGCGCAGAAC
AACACGATCTACATCTGCTACGCCGAGCCGGTGAGCGGCGGCGGCCGCAC
CGCGCTTCTGCGCGCGAAGCTCGTCGATGAAGCCACCCCACGCCTCGACG
ACGTGACGGTGATCTTCCGCCAGGAAGGCCCGCTTTCGAGCGGCGGGCAT
TTCGGCTGCCGCATCGTGCAGACGCCGGACAACAACCTCTTCCTTACGAC
GGGCGACCACTTCCGCCATCGCGACGAGGCGCAGAACCTTGGCAACCATC
TCGGCAAGCTGATCCGCATCGCGCCGGATGGTTCGGTGCCGCGCGACAAT
CCCTTTGTCGGCCGCAGCGATGCCAAACCTGAAATCTGGTCCTACGGCCA
CCGCAACATGCAGGGCGCGGCGCTGCACCCCACGACCGGCAAAGTCTGGG
AGCACGAACACGGCCCGCGCGGCGGCGACGAGGTGAACATCCCCGAGAAG
GGCAAGAACTACGGCTGG
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