mRNA_P-wetherbeei_contig15888.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15888.1.1
Unique NamemRNA_P-wetherbeei_contig15888.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15888.1.1 vs. uniprot
Match: A0A847ZZE8_9HYPH (Extracellular solute-binding protein n=1 Tax=Phyllobacteriaceae bacterium TaxID=1871068 RepID=A0A847ZZE8_9HYPH)

HSP 1 Score: 469 bits (1207), Expect = 9.000e-159
Identity = 233/439 (53.08%), Postives = 312/439 (71.07%), Query Frame = 1
Query:   79 PLFAQGMISAPSGETDLSDAGLDGLANLDAQEVSTIQRLLRRLGYLKPENMTRQMDAATTTALVTHLQATNTPADGMTSEKIMRSLFTAAWIKEGWATGSADGQSLVVEPGEVRQAQDALKKLNYAPGPSDGVFGPATLSAIEIFQEDNGMNVTGLLTRNTFQNVVRALNFVDKKPLSTVHMLNWADYINPASLDNFEKETNIRIVHEVFTNSTETKDLLHQGSAKYDVMVQAGAQMRQILDEKSAVETLDRAKIPNAEFLDPAALSYTDVLDPSNSHSVPYMWGTVGMGVNKEMVRAVRPDAPLNSLSLILDPAIAADVSKCGIAVIDEPIDVIPAFVAYLGGDMKNIGITDLEAVEVALSKVSDYIKVVSVDSYINSLSEGKYCVVWGYSGAIFYARDLAKANGKGTIVYNVPKEGSQLWFDLFVIPNKSQNKDGAY 1395
            P  AQG+I   +   DL+   L  L N   QE++T+QRLL RLGYL P N  R +DAAT +AL  HL A        + E+++RSLF A W KEGWA G A GQ ++V   EVRQAQDALK LN APGP DG+FGPATL+A+E FQ +NG+ V GLLT+    N++RA  F   +P++T+ +L     ++PA+L  FE+ T +R++ + + NS+ETK LL  GSA YD+MVQAGA+MRQ+L+++ AV  +DR KIPN   LD AA  YT+ LDP N+HS+PY+WGTVG+G+NKE V  + PDAP+NS++L+LDP  A  +S CGIA+IDEPIDVIP+ V+Y+GGD KN+GITDLEAV+ ALS++ D+++VV    Y++ L+ GKYC   G+SG +  AR+ AK    GTI Y VP+EGS+LWF LFVIP  ++N+D A+
Sbjct:   23 PAAAQGIIPGRAQPEDLTGTPLASLGNFQPQELATVQRLLVRLGYLPPGNPNRTLDAATVSALANHLSAVGWLGQNPSPEQLLRSLFGAVWKKEGWADGVAPGQRVIVGKDEVRQAQDALKALNGAPGPVDGIFGPATLAAVENFQAENGLKVNGLLTQTMLHNILRAAQFGAAQPVATLRILTAEGVVDPAALAGFEQATRVRVLQDTYENSSETKALLMAGSADYDLMVQAGAEMRQVLEKEGAVIKIDRLKIPNTLRLDTAAQIYTEALDPLNAHSIPYLWGTVGLGLNKEKVAQMVPDAPMNSMALLLDPKYAGPLSGCGIALIDEPIDVIPSIVSYVGGDFKNVGITDLEAVDAALSQIKDFVEVVPKSRYVDGLASGKYCASIGFSGDVLTAREKAKVTQAGTITYAVPREGSELWFQLFVIPQNAKNQDAAH 461          
BLAST of mRNA_P-wetherbeei_contig15888.1.1 vs. uniprot
Match: A0A3P5XZ03_9RHOB (Putrescine-binding periplasmic protein n=1 Tax=Xinfangfangia humi TaxID=2483812 RepID=A0A3P5XZ03_9RHOB)

HSP 1 Score: 317 bits (811), Expect = 4.830e-99
Identity = 187/473 (39.53%), Postives = 283/473 (59.83%), Query Frame = 1
Query:    1 SVTVKKRFALSLSLACAVALSVAGAAPLFAQGMISAPSGETDL--SDAGLDG------LANLDAQEVSTIQRLLRRLGYLKPENMTRQMDAATTTALVTHLQATNTPADGMTSEKIMRSLFTAAWIKEGWATGSADGQSLVVEPGEVRQAQDALKKLNYAPGPSDGVFGPATLSAIEIFQEDNGMNVTGLLTRNTFQNVVRALNFVDKKPLSTVHMLNWADYINPASLDNFEKETNIRIVHEVFTNSTETKDLLHQGSAKYDVMVQAGAQMRQILDEKSAVETLDRAKIPNAEFLDPAALSYTDVLDPSNSHSVPYMWGTVGMGVNKEMVRAVRPDAPLNSLSLILDPAIAADVSKCGIAVIDEPIDVIPAFVAYLGGDMKNIGITDLEAVEVALSKVSDYIKVVSVDSYINSLSEGKYCVVWGYSGAIFYARDLAKANGKGTIV-YNVPKEGSQLWFDLFVIPNKSQNKDGA 1392
            S T+++R+A    LA  V L  A A P  AQG++S   GE     +D G DG      L+  +A+ V+T+QR+L RLGYL    +TR++D  T  A+   ++        + SE+ +R+LF A W K+ W++G ADG  LVV+P  VRQAQ AL+ L YAPGPSDGVFGP T +AIE+FQED  M V GLLT N ++ V+RA +  D      V +LNW DYINP +L  FE+ET +R+ +EVF +  E   L+      YD++++ G  +R ++D+   V+++D A + N E +DP   + T   DPSN+++VPYMWGT+G+ +++  V+  R    + S  L+LD   A  ++ CGI V+D P DV+ A V  +G    ++    L  +E  L+  + Y +VV  + +I+ +++ + CV  GYSG    A  L++A+GK T + + +P EGS +WFD F++  K++  D A
Sbjct:    9 STTLRRRYAGLAGLAALVLL--ASAQPNAAQGLLSVSVGEDGKVRADVGTDGPGSRRTLSEAEARRVATVQRMLARLGYLSEAAITREIDRDTQDAVDAFVKVARLNNPDILSEQFLRALFLAVWAKDNWSSGQADGLDLVVDPKMVRQAQIALRDLGYAPGPSDGVFGPGTFTAIEVFQEDRDMRVDGLLTTNIYEAVMRASSNRDIDYKGEVRVLNWNDYINPETLMQFERETGLRVTYEVFGSLEEADTLMASARKPYDLLMRPGLGIRDMVDQ-DLVQSIDTAALRNFEEIDPVINTITTNWDPSNTYAVPYMWGTMGIVMDRAKVKE-RLGKEVWSWDLLLDVKYARKLADCGILVVDAPNDVLTAMVGAVGKPQSDLNDDSLAGLESRLTATAPYFEVVDSERFIDKVAKHEACVAVGYSGDAMQA--LSQADGKATALNFFIPDEGSIIWFDYFMLSQKAKGVDEA 475          
BLAST of mRNA_P-wetherbeei_contig15888.1.1 vs. uniprot
Match: UPI000D3E8E10 (extracellular solute-binding protein n=1 Tax=Polynucleobacter rarus TaxID=556055 RepID=UPI000D3E8E10)

HSP 1 Score: 273 bits (698), Expect = 2.130e-82
Identity = 151/441 (34.24%), Postives = 240/441 (54.42%), Query Frame = 1
Query:   85 FAQGMISAPSGETDLSDAGLDGLANLDAQE---VSTIQRLLRRLGYLKPENMTRQMDAATTTALVTHLQATNTPADGMTSEKIMRSLFTAAWIKEGWATGSADGQSLVVEPGEVRQAQDALKKLNYAPGPSDGVFGPATLSAIEIFQEDNGMNVTGLLTRNTFQNVVRALNFVDKKPLSTVHMLNWADYINPASLDNFEKETNIRIVHEVFTNSTETKDLLHQGSAKYDVMVQAGAQMRQILDEKSAVETLDRAKIPNAEFLDPAALSYTDVLDPSNSHSVPYMWGTVGMGVNKEMVRAVRPDAPLNSLSLILDPAIAADVSKCGIAVIDEPIDVIPAFVAYLGGDMKNIGITDLEAVEVALSKVSDYIKVVSVDSYINSLSEGKYCVVWGYSGAIFYARDLAKANGKGTIVYNVPKEGSQLWFDLFVIPNKSQNKDGAYQ 1398
            +AQG+ S+P   +  S    +  AN    +   +   QRLL RLGYLK +  T  M +AT  A+       N  +    +E ++++L   AW    W  G+  G+  +++   +R+AQ  L KL + PGP DG FG  T S++E FQ +   ++ G++T+ T  N+ R+      + L TV +LNW DYI P+ L++FE+ET IR++++ + ++ E +  L      YDV +   + +  ++ +K  ++ LD++K+ N   +DP  L+Y +  DP   +S+PYMW T+G+  N ++V    P   L SL ++ DP++A+ +S CG+ VID P DVIP    Y G    N     LEA E  L  +  Y+K +S D YI++L++GK C   G+SG    A+  A  +G   + Y VP EG  L FD    P  S+N D A++
Sbjct:   27 YAQGLYSSPQSPSSPSFT-TNSTANSSVDQSVKIEIAQRLLSRLGYLK-DTPTGVMSSATAEAIRAFSYEHNINSGSSVTEPLLKALRNVAWNSGAWKKGNLKGEDKLLDANGIREAQSYLVKLGFDPGPIDGTFGAQTQSSVESFQANQRTSIDGMITKTTLMNLKRSSILQPGQILGTVRVLNWPDYIEPSVLEDFERETKIRVIYDTYGSNEEMEAKLKSNPEPYDVAIPTASNISALVSQK-LLKPLDKSKLKNLANVDPKILAYLEAWDPGTKYSIPYMWFTLGIATNPKLVAKYLPGVNLESLGIVFDPSVASKLSACGVRVIDSPSDVIPLAALYGGVKKWNNDTPSLEASEKILMGIKKYVKPISSDEYISALAQGKICAAIGFSGDTLQAK--ASQSGGNVVQYRVPVEGGSLGFDTLTTPTNSKNVDAAHK 462          
BLAST of mRNA_P-wetherbeei_contig15888.1.1 vs. uniprot
Match: B1Y5M0_LEPCP (Extracellular solute-binding protein family 1 n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) TaxID=395495 RepID=B1Y5M0_LEPCP)

HSP 1 Score: 228 bits (580), Expect = 3.870e-65
Identity = 142/441 (32.20%), Postives = 216/441 (48.98%), Query Frame = 1
Query:   73 AAPLFAQGMISAPSGETDLSDAGLDGLANLDAQEVSTIQRLLRRLGYLKPENMTRQMDAATTTALVTHLQATNTPADGMTSEKIMRSLFTAAWIKEGWATGSADGQSLVVEPGEVRQAQDALKKLNYAPGPSDGVFGPATLSAIEIFQEDNGMNVTGLLTRNTFQNVVRALNFVDKKPLSTVHMLNWADYINPASLDNFEKETNIRIVHEVFTNSTETKDLLHQGSAKYDVMVQAGAQMRQILDEKSAVETLDRAKIPNAEFLDPAALSYTDVLDPSNSHSVPYMWGTVGMGVNKEMVRAVRPDAPLNSLSLILDPAIAADVSKCGIAVIDEPIDVIPAFVAYLGGDMKNIGITDLEAVEVALSKVSDYIKVVSVDSYINSLSEGKYCVVWGYSGAIFYARDLAKANGKGTIVYNVPKEGSQLWFDLFVIPNKSQNKDGAY 1395
            A P  AQG +       D + A     A   + +V T QRLL R+G  + E  T  +  AT  A+               ++ ++ ++    W  + WA G+  G+  +V+   +R+AQ  L KL +  GP DG FGP T  A E FQE   + V GL+T     N+ RA+N V     STV +LNW DYI P  L +FEKET IR+V+++F N+ + +  L   +A YDV+    A     L  +  +  LD+  + N   LDP   +     D   ++S+PYMW TVG+  N ++     P   +++L+ + D   A     CGI V+D   DV+P   A  GG  +  G   + A    L K+S  +KV+  D +I++L+ GK CV  G+SG    A+    +  +G + Y VP +G  L  D    P  ++N+  A+
Sbjct:   19 AGPTHAQGFVFGTDAPKDQAAAP----AGARSAKVETAQRLLARMGLYR-ETPTGTLTPATQEAIRAFAAQNGLAPTNQVTDPLLNAIRRVIWQTQKWAGGNYKGREKLVDAAGLREAQILLGKLGFDAGPLDGTFGPQTQVAAEAFQESQKVTVDGLITATVLMNLRRAVNGVGASAKSTVRVLNWPDYIEPGVLQDFEKETGIRVVYDIFANAGDLEAKLRNTAAPYDVVFPT-ANSVPALATQGLLAKLDKPSLKNLANLDPRVDATLRSWDKDGAYSLPYMWYTVGIAWNPKLTERAYPGHAMDTLTSVFDAETARRFKSCGIGVVDSATDVVP-LAAMAGGQPRWSGKASINAASQVLDKLSGTVKVIPTDQFIDALASGKICVAIGFSGDAVQAQ----SKSRGAVEYRVPSDGGLLAIDAMATPANAKNRREAH 448          
BLAST of mRNA_P-wetherbeei_contig15888.1.1 vs. uniprot
Match: A0A1F4M3D8_9BURK (ABC transporter substrate-binding protein n=1 Tax=Burkholderiales bacterium RIFOXYD12_FULL_59_19 TaxID=1797574 RepID=A0A1F4M3D8_9BURK)

HSP 1 Score: 224 bits (570), Expect = 1.000e-63
Identity = 141/454 (31.06%), Postives = 226/454 (49.78%), Query Frame = 1
Query:   37 SLACAVALSVAGAAPLFAQGMISAPSGETDLSDAGLDGLANLDAQEVSTIQRLLRRLGYLKPENMTRQMDAATTTALVTHLQATNTPADGMTSEKIMRSLFTAAWIKEGWATGSADGQSLVVEPGEVRQAQDALKKLNYAPGPSDGVFGPATLSAIEIFQEDNGMNVTGLLTRNTFQNVVRALNFVDKKPLSTVHMLNWADYINPASLDNFEKETNIRIVHEVFTNSTETKDLLHQGSAKYDVMVQAGAQMRQILDEKSAVETLDRAKIPNAEFLDPAALSYTDVLDPSNSHSVPYMWGTVGMGVNKEMV-RAVRPDAPLNSLSLILDPAIAADVSKCGIAVIDEPIDVIPAFVAYLGGDMKNIGITDLEAVEVALSKVSDYIKVVSVDSYINSLSEGKYCVVWGYSGAIFYARDLAKANGKGTIVYNVPKEGSQLWFDLFVIPNKSQNKDGAY 1395
            ++A   A+S+ G     AQG +      TD +       A +   +V T QRLL RLG L+ E  T  +  AT  A+               ++ ++ ++    W  + W++G+  G+  +V+   +R+AQ  L KL +  GP DG FGP T  A E FQE   + V GL+T     N+ RA+N V  K   TV +LNW DYI P+ L +FEKET +R+++++F  + +  + L  G   YDV+    A     +  K  +  LD+A + N   +DP   +     D   ++S+PYMW TVG+  N ++  + +  D  +N    + DP +A     CG+ V+D   DV+P   A  GG  K      L A    L  ++  +K++  D +I++L++G+ C+  G+SG    A+      G+GT+ Y VP +G  L  D   +P  ++NK  A+
Sbjct:    5 TIALLAAISIGGITASQAQGFVFG----TDKAPTEAAAPAGVRNAKVETAQRLLTRLGLLR-EAPTGLLTPATQEAIRIFSSRNGLAPSTQVTDTLLNAIRRVIWTTQNWSSGNYKGREKLVDAAGLREAQLLLGKLGFNAGPLDGTFGPQTQVATEAFQESQAVTVDGLITATVLMNLRRAVNGVGAKAKGTVRLLNWPDYIEPSVLQDFEKETGVRVIYDIFAGNDDLVNKLGAGGTPYDVVFPT-ANAVPAMAAKGLLGKLDKASLKNLGNIDPRVDATLRSWDKDGAYSLPYMWYTVGIAWNTKLAPKGIAMDTLVN----VFDPEMARRFQSCGVGVVDSASDVVP-LAAMAGGVAKWDSKKSLAAAAKVLDGINGVVKIIPTDQFIDALAKGQICLAIGFSGDAVQAQ----TKGRGTVEYRVPSDGGLLAIDAMAVPANAKNKREAH 443          
BLAST of mRNA_P-wetherbeei_contig15888.1.1 vs. uniprot
Match: A0A7W9FL68_9HYPH (Putrescine-binding periplasmic protein n=1 Tax=Prosthecomicrobium pneumaticum TaxID=81895 RepID=A0A7W9FL68_9HYPH)

HSP 1 Score: 205 bits (521), Expect = 3.850e-58
Identity = 106/261 (40.61%), Postives = 153/261 (58.62%), Query Frame = 1
Query:  616 VHMLNWADYINPASLDNFEKETNIRIVHEVFTNSTETKDLLHQGSAKYDVMVQAGAQMRQILDEKSAVETLDRAKIPNAEFLDPAALSYTDVLDPSNSHSVPYMWGTVGMGVNKEMVRAVRPDAPLNSLSLILDPAIAADVSKCGIAVIDEPIDVIPAFVAYLGGDMKNIGITDLEAVEVALSKVSDYIKVVSVDSYINSLSEGKYCVVWGYSGAIFYARDLAKANGKGT-IVYNVPKEGSQLWFDLFVIPNKSQNKDGAY 1395
            VH+ NW+DYI+P  LD+F KET I++V++VF ++   +  +  G + YD++V     M++++ E    + LD+AKIPN ++  PA        DP N ++V YMWGT G+G NK+M+     DAP+NS+ +I  P +AA  + CGI V+D   DV+PA + YLG    +    DLE     LS V  YI+      +I +L+ G  C+ +G+SG I  ARD A   G G  I Y +PKEG+ LW D  VIP  + N D AY
Sbjct:   33 VHIYNWSDYIDPTILDDFTKETGIKVVYDVFDSNEMVETKMLAGGSGYDIVVPTDRNMQRLI-EAGVFQPLDKAKIPNLQYAWPAIYERLATYDPGNQYAVNYMWGTTGIGYNKKMIADRMADAPVNSMDMIFKPEVAAKFADCGIYVLDSADDVMPAALNYLGLPADSKKTEDLEKAAELLSSVKPYIRKFHSSEFIEALANGDACIAFGFSGDILQARDRAVEAGNGIEIAYTIPKEGALLWMDSMVIPKDAPNPDAAY 292          
BLAST of mRNA_P-wetherbeei_contig15888.1.1 vs. uniprot
Match: A0A1N6U407_9GAMM (Putrescine-binding periplasmic protein n=2 Tax=Shewanella morhuae TaxID=365591 RepID=A0A1N6U407_9GAMM)

HSP 1 Score: 202 bits (515), Expect = 2.710e-57
Identity = 106/262 (40.46%), Postives = 160/262 (61.07%), Query Frame = 1
Query:  616 VHMLNWADYINPASLDNFEKETNIRIVHEVFTNSTETKDLLHQGSAKYDVMVQAGAQMRQILDEKSAVETLDRAKIPNAEFLDPAALSYTDVLDPSNSHSVPYMWGTVGMGVNKEMVRA-VRPDAPLNSLSLILDPAIAADVSKCGIAVIDEPIDVIPAFVAYLGGDMKNIGITDLEAVEVALSKVSDYIKVVSVDSYINSLSEGKYCVVWGYSGAIFYARDLAKANGKGT-IVYNVPKEGSQLWFDLFVIPNKSQNKDGAY 1395
            VHM NW+DYI   +LDNF+KET IR+V++VF ++   +  L  G + YD++V +   + + + +  A + LDR+K+ N + L+PA +   +  DP N +SVPY+WGT G+G N + V+A +  DAPL+S+ LI +P  A  +SKCG A++D   D++P  + YLG D  +   +D E     L KV  Y+       YI+ L+ G  CV +G+SG +F A+  A+  G G  I Y++PKEG+ LWFD+  IP  S N D A+
Sbjct:   29 VHMYNWSDYIAEDTLDNFKKETGIRVVYDVFDSNEVVETKLLSGRSGYDIVVPSNHFLAKQI-KAGAFKELDRSKLTNFKNLNPALMKLLEKADPGNKYSVPYLWGTNGIGYNIDKVKAAIGEDAPLDSMELIFNPKYAEKISKCGFAMLDSADDMVPQALIYLGLDPNSANPSDYEKAGELLEKVRPYVTYFHSSRYISDLANGDICVAYGFSGDVFQAKARAEEAGNGNKIGYSIPKEGANLWFDMLAIPADSTNVDNAH 289          
BLAST of mRNA_P-wetherbeei_contig15888.1.1 vs. uniprot
Match: A0A0Q6F1G7_9HYPH (Putrescine-binding periplasmic protein n=1 Tax=Aurantimonas sp. Leaf443 TaxID=1736378 RepID=A0A0Q6F1G7_9HYPH)

HSP 1 Score: 199 bits (507), Expect = 4.070e-56
Identity = 104/262 (39.69%), Postives = 162/262 (61.83%), Query Frame = 1
Query:  616 VHMLNWADYINPASLDNFEKETNIRIVHEVFTNSTETKDLLHQGSAKYDVMVQAGAQM-RQILDEKSAVETLDRAKIPNAEFLDPAALSYTDVLDPSNSHSVPYMWGTVGMGVNKEMVRAVRPDAPLNSLSLILDPAIAADVSKCGIAVIDEPIDVIPAFVAYLGGDMKNIGITDLEAVEVALSKVSDYIKVVSVDSYINSLSEGKYCVVWGYSGAIFYARDLAKANGKGT-IVYNVPKEGSQLWFDLFVIPNKSQNKDGAY 1395
            V++ NW+DYI+ + L++F KET I++V++V+ ++   +  L  G + YDV+V +   + R+I  E  A++ LD+AK+ N   L P         D +N +SV YMWGT G+GVN +MV    PDAP++S SL+ DP  A  ++ CGI ++DE +++IPA +AYLG D  +    D+   +  L+KV  +++      YI +L+ G  CV  GYSG +F ARD A+  G+G  I Y++PKEG+++WFD   IP  + N D A+
Sbjct:   30 VNVYNWSDYIDASILEDFTKETGIKVVYDVYDSNEILEAKLLAGGSGYDVVVPSSEFLVREI--EAGALQPLDKAKLKNLGNLWPVVTDRVAAYDKANDYSVNYMWGTTGIGVNAKMVEEALPDAPVDSWSLVFDPQYAQKLASCGIYMLDEAVEMIPAAMAYLGLDPNSTSAEDITKAQELLTKVQPFVRKFHSSEYIEALANGDACVAVGYSGDVFQARDRAEEAGRGVEIAYHIPKEGARMWFDQMAIPADAPNVDNAH 289          
BLAST of mRNA_P-wetherbeei_contig15888.1.1 vs. uniprot
Match: UPI00200F9913 (polyamine ABC transporter substrate-binding protein n=2 Tax=Shewanella TaxID=22 RepID=UPI00200F9913)

HSP 1 Score: 197 bits (502), Expect = 1.780e-55
Identity = 101/263 (38.40%), Postives = 161/263 (61.22%), Query Frame = 1
Query:  616 VHMLNWADYINPASLDNFEKETNIRIVHEVFTNSTETKDLLHQGSAKYDVMVQAGAQMRQILDEKSAVETLDRAKIPNAEFLDPAALSYTDVLDPSNSHSVPYMWGTVGMGVNKEMVRAVR-PDAPLNSLSLILDPAIAADVSKCGIAVIDEPIDVIPAFVAYLGGDMKNIGITDLEAVEVALSKVSDYIKVVSVDSYINSLSEGKYCVVWGYSGAIFYARDLAKANGKGTIV-YNVPKEGSQLWFDLFVIPNKSQNKDGAYQ 1398
            V + NW+DYI P  L++FEKET IR+V++VF ++   +  L  G + YD++V     M + + +  A + LD++K+PN + LDP  +   D +DP N +S+PY+WGT G+G N + V+A+   DAP++S++LI DP  A+ +++CGI+ +D P ++IP  + Y+G D  +    D +     LS V  Y++      +I+ L+ G  CV +G+SG I  A+  A+  G G  V Y +P+EG+ LWFD+  IP  S N D AY+
Sbjct:   21 VRVYNWSDYIEPKVLEDFEKETGIRVVYDVFDSNEVLEAKLLSGRSGYDIVVPTNHFMAKQI-QAGAFQKLDKSKLPNFKNLDPKLMKQLDKVDPGNQYSLPYLWGTTGIGYNVDKVKAILGDDAPVDSMALIFDPKYASKLAQCGISFLDSPDEMIPHALQYMGMDPNSTKRADYKKAGELLSSVRPYVRYFHSSRFISDLANGDLCVAFGFSGDILQAKARAEEAGNGQHVEYAIPQEGANLWFDMIAIPADSTNTDNAYK 282          
BLAST of mRNA_P-wetherbeei_contig15888.1.1 vs. uniprot
Match: A0A7W6H2F7_9HYPH (Putrescine-binding periplasmic protein n=1 Tax=Aureimonas pseudogalii TaxID=1744844 RepID=A0A7W6H2F7_9HYPH)

HSP 1 Score: 197 bits (502), Expect = 2.040e-55
Identity = 107/263 (40.68%), Postives = 157/263 (59.70%), Query Frame = 1
Query:  616 VHMLNWADYINPASLDNFEKETNIRIVHEVFTNSTETKDLLHQGSAKYDVMVQAGAQM-RQILDEKSAVETLDRAKIPNAEFLDPAALSYTDVLDPSNSHSVPYMWGTVGMGVNKEMVRAVRPDAPLNSLSLILDPAIAADVSKCGIAVIDEPIDVIPAFVAYLGGDMKNIGITDLEAVEVALSKVSDYIKVVSVDSYINSLSEGKYCVVWGYSGAIFYARDLAKANGKGT-IVYNVPKEGSQLWFDLFVIPNKSQNKDGAYQ 1398
            V++ NW+DYI+ +++D F KET IR+V++V+ ++   +  L  G + YDV+V +   M RQI  E    + LD AK+PN + + P         DP N++SV YMWGT G+G N   V+A+ PDAP++S +L+ DP  A  +SKCGI ++D P ++IPA + YLG D        +   E  L KV  +I+      YIN+L+ G  CV  G+SG +F ARD A   G G  I Y +PKEG+ +WFD  V+P  + + D A+Q
Sbjct:   27 VNVYNWSDYIDTSTVDAFTKETGIRVVYDVYDSNEILETRLLAGGSGYDVVVPSAEYMARQI--EAGVFQKLDPAKLPNLKNMWPLITERVAAYDPGNAYSVNYMWGTTGVGYNVAKVKAILPDAPVDSWALVFDPKYAEPLSKCGIDMLDAPGEIIPAALRYLGLDPDARDAETIGKAEELLMKVRPFIRRFHSSEYINALANGDICVAVGFSGDVFQARDRAAEAGAGVEIAYAIPKEGAMMWFDQMVVPTDAPHVDAAHQ 287          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15888.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A847ZZE8_9HYPH9.000e-15953.08Extracellular solute-binding protein n=1 Tax=Phyll... [more]
A0A3P5XZ03_9RHOB4.830e-9939.53Putrescine-binding periplasmic protein n=1 Tax=Xin... [more]
UPI000D3E8E102.130e-8234.24extracellular solute-binding protein n=1 Tax=Polyn... [more]
B1Y5M0_LEPCP3.870e-6532.20Extracellular solute-binding protein family 1 n=1 ... [more]
A0A1F4M3D8_9BURK1.000e-6331.06ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A7W9FL68_9HYPH3.850e-5840.61Putrescine-binding periplasmic protein n=1 Tax=Pro... [more]
A0A1N6U407_9GAMM2.710e-5740.46Putrescine-binding periplasmic protein n=2 Tax=She... [more]
A0A0Q6F1G7_9HYPH4.070e-5639.69Putrescine-binding periplasmic protein n=1 Tax=Aur... [more]
UPI00200F99131.780e-5538.40polyamine ABC transporter substrate-binding protei... [more]
A0A7W6H2F7_9HYPH2.040e-5540.68Putrescine-binding periplasmic protein n=1 Tax=Aur... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15888contigP-wetherbeei_contig15888:2..1399 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog365044.Pnap_3137
PFAMsPG_binding_1,SBP_bac_8
Model size1398
Max annot lvl28216|Betaproteobacteria
KEGG koko:K11073
KEGG TC3.A.1.11.2
KEGG Pathwayko02010,map02010
KEGG ModuleM00300
Hectar predicted targeting categorysignal peptide
Exons1
Evalue2.96e-73
EggNOG OGsCOG0687@1|root,COG3409@1|root,COG0687@2|Bacteria,COG3409@2|Bacteria,1MUYW@1224|Proteobacteria,2VJDV@28216|Betaproteobacteria,4AAEK@80864|Comamonadaceae
DescriptionRequired for the activity of the bacterial periplasmic transport system of putrescine
Cds size1398
COG categoryE
BRITEko00000,ko00001,ko00002,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186070.270396-CDS-P-wetherbeei_contig15888:1..13991683186070.270396-CDS-P-wetherbeei_contig15888:1..1399Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15888 2..1399 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15888.1.1prot_P-wetherbeei_contig15888.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15888 2..1399 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15888.1.1

>prot_P-wetherbeei_contig15888.1.1 ID=prot_P-wetherbeei_contig15888.1.1|Name=mRNA_P-wetherbeei_contig15888.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=466bp
SVTVKKRFALSLSLACAVALSVAGAAPLFAQGMISAPSGETDLSDAGLDG
LANLDAQEVSTIQRLLRRLGYLKPENMTRQMDAATTTALVTHLQATNTPA
DGMTSEKIMRSLFTAAWIKEGWATGSADGQSLVVEPGEVRQAQDALKKLN
YAPGPSDGVFGPATLSAIEIFQEDNGMNVTGLLTRNTFQNVVRALNFVDK
KPLSTVHMLNWADYINPASLDNFEKETNIRIVHEVFTNSTETKDLLHQGS
AKYDVMVQAGAQMRQILDEKSAVETLDRAKIPNAEFLDPAALSYTDVLDP
SNSHSVPYMWGTVGMGVNKEMVRAVRPDAPLNSLSLILDPAIAADVSKCG
IAVIDEPIDVIPAFVAYLGGDMKNIGITDLEAVEVALSKVSDYIKVVSVD
SYINSLSEGKYCVVWGYSGAIFYARDLAKANGKGTIVYNVPKEGSQLWFD
LFVIPNKSQNKDGAYQ
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mRNA from alignment at P-wetherbeei_contig15888:2..1399-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15888.1.1 ID=mRNA_P-wetherbeei_contig15888.1.1|Name=mRNA_P-wetherbeei_contig15888.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1398bp|location=Sequence derived from alignment at P-wetherbeei_contig15888:2..1399- (Phaeothamnion wetherbeei SAG_119_79)
TCCGTCACCGTGAAGAAACGCTTTGCCTTATCTCTATCTCTTGCCTGCGC CGTTGCGCTCTCTGTTGCAGGGGCAGCGCCGCTTTTTGCGCAGGGCATGA TTTCCGCGCCGTCAGGGGAAACCGACCTGTCGGATGCGGGCCTTGACGGC CTTGCAAATCTTGATGCCCAGGAGGTGTCCACAATCCAGCGCCTGCTGCG GCGGCTGGGTTATCTCAAGCCGGAAAACATGACCCGCCAGATGGATGCCG CCACGACGACGGCACTCGTCACCCATCTTCAGGCAACGAACACGCCGGCC GATGGCATGACGTCTGAAAAAATCATGCGCTCGCTGTTTACCGCCGCATG GATCAAGGAAGGCTGGGCCACGGGAAGTGCCGACGGCCAGAGCCTGGTGG TGGAGCCCGGCGAAGTGCGCCAGGCGCAGGATGCGCTGAAGAAGCTCAAC TATGCCCCGGGGCCATCGGACGGCGTGTTCGGGCCTGCCACGCTTTCGGC CATCGAGATTTTCCAGGAAGACAACGGGATGAATGTTACGGGCCTGCTCA CCCGCAACACATTCCAGAATGTCGTCCGGGCCTTGAACTTTGTTGACAAG AAGCCGCTGAGCACGGTGCACATGCTCAACTGGGCTGACTACATCAACCC GGCTTCCCTCGACAATTTCGAGAAGGAAACCAATATCCGCATCGTGCACG AGGTGTTCACCAACTCGACGGAAACCAAGGATCTCCTGCACCAGGGCTCC GCCAAATATGATGTGATGGTGCAGGCCGGGGCGCAGATGCGCCAGATCCT GGATGAAAAAAGTGCGGTTGAAACGCTCGACCGGGCGAAAATTCCAAATG CAGAATTTCTTGACCCAGCGGCCCTCAGCTACACTGATGTTCTCGACCCC AGCAATTCCCACTCGGTGCCCTACATGTGGGGTACGGTTGGAATGGGTGT GAACAAGGAAATGGTGCGGGCGGTCCGGCCCGATGCGCCGCTCAACAGCC TGAGCCTCATTCTTGATCCGGCGATTGCCGCCGATGTTTCGAAATGCGGC ATCGCGGTGATTGACGAGCCGATTGATGTGATCCCGGCCTTCGTTGCCTA TCTGGGCGGCGACATGAAGAACATCGGCATCACCGATCTGGAAGCGGTGG AAGTGGCTCTCTCGAAAGTCTCTGACTATATCAAGGTCGTGTCGGTGGAC AGCTATATCAACAGCCTGTCCGAGGGGAAATATTGCGTGGTGTGGGGCTA TTCGGGCGCCATATTTTATGCGCGCGATCTGGCCAAGGCGAACGGCAAGG GGACTATTGTCTACAATGTTCCCAAGGAAGGCAGCCAGCTCTGGTTTGAC CTGTTCGTCATTCCCAACAAGTCGCAGAACAAGGATGGGGCCTATCAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15888:2..1399-

>mRNA_P-wetherbeei_contig15888.1.1 ID=mRNA_P-wetherbeei_contig15888.1.1|Name=mRNA_P-wetherbeei_contig15888.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1398bp|location=Sequence derived from alignment at P-wetherbeei_contig15888:2..1399- (Phaeothamnion wetherbeei SAG_119_79)
TCCGTCACCGTGAAGAAACGCTTTGCCTTATCTCTATCTCTTGCCTGCGC
CGTTGCGCTCTCTGTTGCAGGGGCAGCGCCGCTTTTTGCGCAGGGCATGA
TTTCCGCGCCGTCAGGGGAAACCGACCTGTCGGATGCGGGCCTTGACGGC
CTTGCAAATCTTGATGCCCAGGAGGTGTCCACAATCCAGCGCCTGCTGCG
GCGGCTGGGTTATCTCAAGCCGGAAAACATGACCCGCCAGATGGATGCCG
CCACGACGACGGCACTCGTCACCCATCTTCAGGCAACGAACACGCCGGCC
GATGGCATGACGTCTGAAAAAATCATGCGCTCGCTGTTTACCGCCGCATG
GATCAAGGAAGGCTGGGCCACGGGAAGTGCCGACGGCCAGAGCCTGGTGG
TGGAGCCCGGCGAAGTGCGCCAGGCGCAGGATGCGCTGAAGAAGCTCAAC
TATGCCCCGGGGCCATCGGACGGCGTGTTCGGGCCTGCCACGCTTTCGGC
CATCGAGATTTTCCAGGAAGACAACGGGATGAATGTTACGGGCCTGCTCA
CCCGCAACACATTCCAGAATGTCGTCCGGGCCTTGAACTTTGTTGACAAG
AAGCCGCTGAGCACGGTGCACATGCTCAACTGGGCTGACTACATCAACCC
GGCTTCCCTCGACAATTTCGAGAAGGAAACCAATATCCGCATCGTGCACG
AGGTGTTCACCAACTCGACGGAAACCAAGGATCTCCTGCACCAGGGCTCC
GCCAAATATGATGTGATGGTGCAGGCCGGGGCGCAGATGCGCCAGATCCT
GGATGAAAAAAGTGCGGTTGAAACGCTCGACCGGGCGAAAATTCCAAATG
CAGAATTTCTTGACCCAGCGGCCCTCAGCTACACTGATGTTCTCGACCCC
AGCAATTCCCACTCGGTGCCCTACATGTGGGGTACGGTTGGAATGGGTGT
GAACAAGGAAATGGTGCGGGCGGTCCGGCCCGATGCGCCGCTCAACAGCC
TGAGCCTCATTCTTGATCCGGCGATTGCCGCCGATGTTTCGAAATGCGGC
ATCGCGGTGATTGACGAGCCGATTGATGTGATCCCGGCCTTCGTTGCCTA
TCTGGGCGGCGACATGAAGAACATCGGCATCACCGATCTGGAAGCGGTGG
AAGTGGCTCTCTCGAAAGTCTCTGACTATATCAAGGTCGTGTCGGTGGAC
AGCTATATCAACAGCCTGTCCGAGGGGAAATATTGCGTGGTGTGGGGCTA
TTCGGGCGCCATATTTTATGCGCGCGATCTGGCCAAGGCGAACGGCAAGG
GGACTATTGTCTACAATGTTCCCAAGGAAGGCAGCCAGCTCTGGTTTGAC
CTGTTCGTCATTCCCAACAAGTCGCAGAACAAGGATGGGGCCTATCAG
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