mRNA_P-wetherbeei_contig15862.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15862.1.1 vs. uniprot
Match: A0A537E442_9PROT (GGDEF domain-containing protein n=5 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537E442_9PROT) HSP 1 Score: 209 bits (531), Expect = 2.110e-64 Identity = 99/145 (68.28%), Postives = 124/145 (85.52%), Query Frame = 1
Query: 1 RLFGQAQRYSRAASVLMIDSDNLKAVNDTHGHEAGNRLLRQLAERIQAELRYTDVPARYGGDEFVVLLPETPPEGAVDVAERIRDSMAGKPLVFDGKQVASTISIGVASFPEDGQSMDAIVGRADRALYKAKNAGRNRVERFKPD 435
RLFGQA RY+R ASVLM+D DNLKAVND+HGH+AGNRLLR A ++AELRYTD+PARYGGDEF+VLLPETPP GA+DVAERIR ++A +PL D ++AS++SIGVA FP+DG+++DA+ RADRALY+AK GRN V R++P+
Sbjct: 203 RLFGQALRYTRPASVLMVDLDNLKAVNDSHGHDAGNRLLRHTANALRAELRYTDLPARYGGDEFIVLLPETPPRGALDVAERIRKAVADRPLDMDVGKIASSVSIGVACFPDDGRTLDALATRADRALYEAKQKGRNCVVRYRPE 347
BLAST of mRNA_P-wetherbeei_contig15862.1.1 vs. uniprot
Match: A0A1F4FHE3_9PROT (GGDEF domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4FHE3_9PROT) HSP 1 Score: 209 bits (531), Expect = 2.780e-64 Identity = 102/143 (71.33%), Postives = 119/143 (83.22%), Query Frame = 1
Query: 1 RLFGQAQRYSRAASVLMIDSDNLKAVNDTHGHEAGNRLLRQLAERIQAELRYTDVPARYGGDEFVVLLPETPPEGAVDVAERIRDSMAGKPLVFDGKQVASTISIGVASFPEDGQSMDAIVGRADRALYKAKNAGRNRVERFK 429
RLFGQA RY R ASVLMIDSDNLK VND +GHEAGNRLLRQLA IQ ELR TDVPARYGGDEF+VLLPETP +GA+DVAER+R ++AG PL +GK VAS++S+GVA FPEDG+++D + RADRALY AK GRN V R++
Sbjct: 213 RLFGQAVRYDRPASVLMIDSDNLKRVNDDYGHEAGNRLLRQLANAIQGELRATDVPARYGGDEFIVLLPETPGKGALDVAERVRSAIAGMPLAAEGKSVASSVSVGVACFPEDGRTLDTLAARADRALYMAKQQGRNCVVRYR 355
BLAST of mRNA_P-wetherbeei_contig15862.1.1 vs. uniprot
Match: A0A1F4EZJ5_9PROT (GGDEF domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4EZJ5_9PROT) HSP 1 Score: 201 bits (510), Expect = 4.490e-61 Identity = 97/142 (68.31%), Postives = 119/142 (83.80%), Query Frame = 1
Query: 1 RLFGQAQRYSRAASVLMIDSDNLKAVNDTHGHEAGNRLLRQLAERIQAELRYTDVPARYGGDEFVVLLPETPPEGAVDVAERIRDSMAGKPLVFDGKQVASTISIGVASFPEDGQSMDAIVGRADRALYKAKNAGRNRVERF 426
RLF QA RY R +SVLMIDSD+LK VND++GHEAGNRLLRQLA I AELR +D+ ARYGGDEF+VLLPETP +GA +VA+RIRDS+ G PL DGK++ S++SIG+ASFPEDG+++DA+ RADRALY+AK GRNR +F
Sbjct: 216 RLFAQALRYDRPSSVLMIDSDHLKGVNDSYGHEAGNRLLRQLARLILAELRGSDLSARYGGDEFIVLLPETPAKGAHEVADRIRDSVVGSPLDLDGKRIVSSVSIGIASFPEDGRTLDALAARADRALYRAKQDGRNRTVKF 357
BLAST of mRNA_P-wetherbeei_contig15862.1.1 vs. uniprot
Match: A0A1F4AQ42_9PROT (GGDEF domain-containing protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4AQ42_9PROT) HSP 1 Score: 200 bits (509), Expect = 5.550e-61 Identity = 96/142 (67.61%), Postives = 119/142 (83.80%), Query Frame = 1
Query: 1 RLFGQAQRYSRAASVLMIDSDNLKAVNDTHGHEAGNRLLRQLAERIQAELRYTDVPARYGGDEFVVLLPETPPEGAVDVAERIRDSMAGKPLVFDGKQVASTISIGVASFPEDGQSMDAIVGRADRALYKAKNAGRNRVERF 426
R+F QA+RY+R +S+LMIDSDNLK+VND+HGH+AGN+LLRQLA I+AE+R TDVPARYGGDEF+V L ETP GA+ VAERIRD+MA PL FDG++V T+SIGVA +P+DG ++ I RADRALY+AK +GRNRV RF
Sbjct: 212 RMFAQAKRYNRESSILMIDSDNLKSVNDSHGHQAGNQLLRQLAAAIRAEVRGTDVPARYGGDEFIVFLSETPINGALAVAERIRDTMAATPLEFDGREVLCTVSIGVAGYPDDGVMLETIAARADRALYQAKQSGRNRVIRF 353
BLAST of mRNA_P-wetherbeei_contig15862.1.1 vs. uniprot
Match: A0A536Y1P8_9PROT (GGDEF domain-containing protein n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536Y1P8_9PROT) HSP 1 Score: 194 bits (493), Expect = 1.530e-58 Identity = 92/143 (64.34%), Postives = 117/143 (81.82%), Query Frame = 1
Query: 1 RLFGQAQRYSRAASVLMIDSDNLKAVNDTHGHEAGNRLLRQLAERIQAELRYTDVPARYGGDEFVVLLPETPPEGAVDVAERIRDSMAGKPLVFDGKQVASTISIGVASFPEDGQSMDAIVGRADRALYKAKNAGRNRVERFK 429
RLF QA R+ RA SVLMIDSD+LK+VND +GH AGNR+LR LAE IQAELR+TD+ ARYGGDEF+VLLP+TP +GA++VAERIR+ +AG PL D K +A+++SIG+AS+PEDG ++DA+ AD ALY AK GRNR +F+
Sbjct: 212 RLFAQAARHGRATSVLMIDSDHLKSVNDGYGHAAGNRMLRHLAESIQAELRFTDIAARYGGDEFIVLLPDTPAKGAMEVAERIRNRIAGSPLAMDSKSLATSVSIGIASYPEDGATLDALAAHADGALYSAKQDGRNRSVKFR 354
BLAST of mRNA_P-wetherbeei_contig15862.1.1 vs. uniprot
Match: A0A521XH77_9PROT (GGDEF domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521XH77_9PROT) HSP 1 Score: 187 bits (475), Expect = 6.280e-56 Identity = 90/142 (63.38%), Postives = 116/142 (81.69%), Query Frame = 1
Query: 1 RLFGQAQRYSRAASVLMIDSDNLKAVNDTHGHEAGNRLLRQLAERIQAELRYTDVPARYGGDEFVVLLPETPPEGAVDVAERIRDSMAGKPLVFDGKQVASTISIGVASFPEDGQSMDAIVGRADRALYKAKNAGRNRVERF 426
RLFGQA RY+R AS+LMIDSDNLK VND HGHEAGNRLL+ +A+ I ELR+TDV ARYGGDEFV LLPET P+ A++VA+RI ++ PL F+GK++ +++SIG+A +PEDG+S+DA+ RADRA+Y+AK GRN V +F
Sbjct: 208 RLFGQAVRYNRQASLLMIDSDNLKEVNDLHGHEAGNRLLKMVAKCIGTELRHTDVLARYGGDEFVALLPETAPDRALEVAQRILKAVTTAPLEFEGKRIETSVSIGLACYPEDGRSIDAVQARADRAMYRAKEQGRNSVVKF 349
BLAST of mRNA_P-wetherbeei_contig15862.1.1 vs. uniprot
Match: A0A1F4CKH6_9PROT (GGDEF domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_64_23 TaxID=1797499 RepID=A0A1F4CKH6_9PROT) HSP 1 Score: 186 bits (473), Expect = 1.250e-55 Identity = 91/142 (64.08%), Postives = 116/142 (81.69%), Query Frame = 1
Query: 1 RLFGQAQRYSRAASVLMIDSDNLKAVNDTHGHEAGNRLLRQLAERIQAELRYTDVPARYGGDEFVVLLPETPPEGAVDVAERIRDSMAGKPLVFDGKQVASTISIGVASFPEDGQSMDAIVGRADRALYKAKNAGRNRVERF 426
RLF QA RY+R ASVLM DSDNLKAVND HGHEAGNRLL+ +A+ I+ ELR+TDV ARYGGDEFV LLPE P A++VA+RI ++A PL F+GK + +++S G+AS+P+DG+++DAI GRADRA+Y+AK GRNRV +F
Sbjct: 208 RLFEQAVRYNRPASVLMFDSDNLKAVNDLHGHEAGNRLLKLVAKCIETELRHTDVLARYGGDEFVALLPEAPAAKALEVAQRIIKTIATTPLEFEGKSIDTSVSAGLASYPDDGRTIDAIQGRADRAMYRAKEQGRNRVVKF 349
BLAST of mRNA_P-wetherbeei_contig15862.1.1 vs. uniprot
Match: A0A537AG54_9PROT (GGDEF domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537AG54_9PROT) HSP 1 Score: 187 bits (474), Expect = 2.810e-55 Identity = 88/143 (61.54%), Postives = 116/143 (81.12%), Query Frame = 1
Query: 1 RLFGQAQRYSRAASVLMIDSDNLKAVNDTHGHEAGNRLLRQLAERIQAELRYTDVPARYGGDEFVVLLPETPPEGAVDVAERIRDSMAGKPLVFDGKQVASTISIGVASFPEDGQSMDAIVGRADRALYKAKNAGRNRVERFK 429
RLF QA R+ RA SVLMIDSDNLK+VND +GH AG++LLR LA+ IQAELR+TDV ARYGGDEF+VLLP+TP +GA++VAERIR+ +AG P+ D +++ +++SIG+A +PEDG ++DA+ AD ALY AK GRNR +F+
Sbjct: 251 RLFAQAARHGRATSVLMIDSDNLKSVNDGYGHAAGDQLLRHLAQAIQAELRFTDVAARYGGDEFIVLLPDTPAKGALEVAERIRNRIAGAPVRIDSRELVTSVSIGIACYPEDGATLDALAAHADGALYSAKQDGRNRTVKFR 393
BLAST of mRNA_P-wetherbeei_contig15862.1.1 vs. uniprot
Match: A0A1F4H359_9PROT (GGDEF domain-containing protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4H359_9PROT) HSP 1 Score: 183 bits (465), Expect = 1.890e-54 Identity = 87/142 (61.27%), Postives = 115/142 (80.99%), Query Frame = 1
Query: 1 RLFGQAQRYSRAASVLMIDSDNLKAVNDTHGHEAGNRLLRQLAERIQAELRYTDVPARYGGDEFVVLLPETPPEGAVDVAERIRDSMAGKPLVFDGKQVASTISIGVASFPEDGQSMDAIVGRADRALYKAKNAGRNRVERF 426
RLF QAQRY+R +V+MID D KA+ND++GHE G+R+LR +A+ IQ ELR+TDV ARYGGDEFV LLPETP + A+DVA RIR+++AG PL DG+ V ++SIG+AS+PE G+++D+I+GRADRA+Y AK GRN V +F
Sbjct: 206 RLFAQAQRYNRPVTVMMIDMDRFKALNDSYGHEWGDRMLRLVAKCIQTELRHTDVLARYGGDEFVALLPETPADSALDVASRIREAVAGTPLEADGRSVVGSVSIGIASYPEAGRTLDSILGRADRAMYLAKQKGRNGVVKF 347
BLAST of mRNA_P-wetherbeei_contig15862.1.1 vs. uniprot
Match: A0A1F4AYD6_9PROT (GGDEF domain-containing protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4AYD6_9PROT) HSP 1 Score: 178 bits (452), Expect = 1.920e-52 Identity = 91/142 (64.08%), Postives = 108/142 (76.06%), Query Frame = 1
Query: 1 RLFGQAQRYSRAASVLMIDSDNLKAVNDTHGHEAGNRLLRQLAERIQAELRYTDVPARYGGDEFVVLLPETPPEGAVDVAERIRDSMAGKPLVFDGKQVASTISIGVASFPEDGQSMDAIVGRADRALYKAKNAGRNRVERF 426
R F QA RYSR SVLMIDSDNLK VND +GHEAGN LLRQLA I+A LR TDVPARYGGDEFVVLLP+T + A DVAERIR+S+ +PL V T+SIG+A +P DG+S + ++ RAD+A+Y+AK GRNRV RF
Sbjct: 206 RAFAQAVRYSRPLSVLMIDSDNLKVVNDKYGHEAGNDLLRQLAASIKAHLRTTDVPARYGGDEFVVLLPDTDADAARDVAERIRESIVRRPLELRDDSVLITVSIGLACYPADGRSAEILMERADQAMYRAKEQGRNRVVRF 347 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15862.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15862.1.1 >prot_P-wetherbeei_contig15862.1.1 ID=prot_P-wetherbeei_contig15862.1.1|Name=mRNA_P-wetherbeei_contig15862.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=146bp RLFGQAQRYSRAASVLMIDSDNLKAVNDTHGHEAGNRLLRQLAERIQAELback to top mRNA from alignment at P-wetherbeei_contig15862:1..438+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15862.1.1 ID=mRNA_P-wetherbeei_contig15862.1.1|Name=mRNA_P-wetherbeei_contig15862.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=438bp|location=Sequence derived from alignment at P-wetherbeei_contig15862:1..438+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15862:1..438+ >mRNA_P-wetherbeei_contig15862.1.1 ID=mRNA_P-wetherbeei_contig15862.1.1|Name=mRNA_P-wetherbeei_contig15862.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=438bp|location=Sequence derived from alignment at P-wetherbeei_contig15862:1..438+ (Phaeothamnion wetherbeei SAG_119_79)back to top |