mRNA_P-wetherbeei_contig1586.3.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1586.3.2 vs. uniprot
Match: A0A836CQU4_9STRA (Putative microtubule associated protein EB1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQU4_9STRA) HSP 1 Score: 221 bits (563), Expect = 4.630e-67 Identity = 158/266 (59.40%), Postives = 191/266 (71.80%), Query Frame = 3
Query: 213 VGRREILEWINGTLQLNLSTIEQTASGCVALQLLDSLHPGSVPMSKVDWTAKQDFQFVGNYKILQNSFDKLGVGKHVDVDKLIRAKYQDNLEFMQWFKRYHQSVGMATDYDPVAARAGGKGAPGATGCAAPASARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSAPAGMETSAQVAADLAAKEERIAALTHEVSEMLAAHQTVERERDFYFEKLRDVEVLLQLREEHGHPVEGAADVFKILYAS 1010
VGRREILEW+NGTL LNLS IE+TASGCVALQL+D+ +PG V + K++W+A+ D++F+ NYK+LQ +FDK V KH+ VDK++RAKYQDNLEFMQWFKRY + G A YDPVAAR+ GKGAPGA+ PA+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++ + T AQ EV+E+ A + +E+ERDFYFEKLRDVEVLLQLREE G PV+G D+FKILYA+
Sbjct: 14 VGRREILEWLNGTLSLNLSKIEETASGCVALQLMDACYPGQVSIQKLNWSARNDYEFIQNYKLLQTAFDKFHVDKHIPVDKIVRAKYQDNLEFMQWFKRYVEITGPAPGYDPVAARSKGKGAPGASS-GQPAA-----------------RTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKATSTSTELTRAQ----------------DEVAELKVAVEVLEKERDFYFEKLRDVEVLLQLREEQGKPVDGMQDIFKILYAT 245
BLAST of mRNA_P-wetherbeei_contig1586.3.2 vs. uniprot
Match: F0WQF4_9STRA (Microtubule associated protein EB1 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WQF4_9STRA) HSP 1 Score: 179 bits (454), Expect = 1.490e-50 Identity = 114/285 (40.00%), Postives = 151/285 (52.98%), Query Frame = 3
Query: 213 VGRREILEWINGTLQLNLSTIEQTASGCVALQLLDSLHPGSVPMSKVDWTAKQDFQFVGNYKILQNSFDKLGVGKHVDVDKLIRAKYQDNLEFMQWFKRYHQSVGMATDYDPVAARAGGKGA-------PGATGCAAPASARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSAPAGMETSAQVA----ADLAAKEERIAA-------LTHEVSEMLAAHQTVERERDFYFEKLRDVEVLLQLREEHGHPVEGAADVFKILYASQ 1013
VGR+EIL+WIN T NL+ +EQT +G +A Q+LDS++PG VPMSKVDW+A +D++++ NYK+LQ F L + K+VDVD+LIR KYQDNLEFMQWFK++H+ YDPVA R GKG G T AP+ A AP ME+ V A + KE+++A LT E E+ AA +E ERDFYF KLRD+E+LLQ E+ G D+FK+LYA++
Sbjct: 17 VGRKEILDWINQTCHTNLTKVEQTCTGAIACQILDSIYPGKVPMSKVDWSANKDYEYIQNYKVLQKCFTNLKIDKYVDVDRLIRGKYQDNLEFMQWFKKFHELNASGQSYDPVAQREKGKGGIQFSNKHRGGTSSIAPSPANIISNDLRRRNAGSHVARNSFPSRTRTNRPP--------------------GAPTAMESQNAVTMASTASIVEKEKQLAEFKAANALLTDENGELRAAVTGLETERDFYFGKLRDIEILLQNIED-GEQNALVQDLFKLLYATE 280
BLAST of mRNA_P-wetherbeei_contig1586.3.2 vs. uniprot
Match: A0A7S3YCI0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YCI0_HETAK) HSP 1 Score: 172 bits (436), Expect = 7.450e-50 Identity = 79/121 (65.29%), Postives = 97/121 (80.17%), Query Frame = 3
Query: 213 VGRREILEWINGTLQLNLSTIEQTASGCVALQLLDSLHPGSVPMSKVDWTAKQDFQFVGNYKILQNSFDKLGVGKHVDVDKLIRAKYQDNLEFMQWFKRYHQSVGMATDYDPVAARAGGKG 575
VGRREILEW+N + NLS IEQTA+G +A QLLD++HPG +PMSKV+W AKQD++F+ NYKILQ FDK+G+ KHVDV KLIRA+YQDNLEFMQWFKRY + G + YD + R+ GKG
Sbjct: 13 VGRREILEWLNECMNTNLSKIEQTATGAIACQLLDAVHPGQIPMSKVNWDAKQDYEFIDNYKILQRGFDKIGIDKHVDVQKLIRARYQDNLEFMQWFKRYFELNGPVSAYDVMGQRSKGKG 133
BLAST of mRNA_P-wetherbeei_contig1586.3.2 vs. uniprot
Match: A0A024GNZ4_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GNZ4_9STRA) HSP 1 Score: 176 bits (447), Expect = 1.770e-49 Identity = 115/285 (40.35%), Postives = 151/285 (52.98%), Query Frame = 3
Query: 213 VGRREILEWINGTLQLNLSTIEQTASGCVALQLLDSLHPGSVPMSKVDWTAKQDFQFVGNYKILQNSFDKLGVGKHVDVDKLIRAKYQDNLEFMQWFKRYHQSVGMATDYDPVAARAGGKGAP-------GATGCAAPASARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSAPAGMETSAQVA----ADLAAKEERIAA-------LTHEVSEMLAAHQTVERERDFYFEKLRDVEVLLQLREEHGHPVEGAADVFKILYASQ 1013
VGR+EIL+WIN T NL+ +EQT +G +A Q+LDSL+PG VPMSKVDW+A +D++++ NYK+LQ F L + K+VDVD+LIR KYQDNLEFMQWFK++++ YDPVA R GKG G T AP+ A AP ME+ V A LA KE+++ LT E E+ AA +E ERDFYF KLRD+E+LLQ E+ G D+FK+LYA++
Sbjct: 17 VGRKEILDWINQTCHTNLTKVEQTCTGAIACQILDSLYPGKVPMSKVDWSANKDYEYIQNYKVLQKCFTNLKIDKYVDVDRLIRGKYQDNLEFMQWFKKFYELNATGLSYDPVAQREKGKGGVQFSNKHRGGTSSMAPSPASTTSHDLRRRNTGSCNIARNNLPSRTRTNRPP-------------------GAPVMMESQNVVTMANTASLAEKEKQLTEIKAANELLTDENGELRAAVTGLETERDFYFGKLRDIEILLQNIED-GEQNPLVQDLFKLLYATE 281
BLAST of mRNA_P-wetherbeei_contig1586.3.2 vs. uniprot
Match: W7TMC3_9STRA (Microtubule-associated protein rp eb family member 1 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMC3_9STRA) HSP 1 Score: 176 bits (446), Expect = 7.710e-49 Identity = 84/134 (62.69%), Postives = 107/134 (79.85%), Query Frame = 3
Query: 213 VGRREILEWINGTLQLNLSTIEQTASGCVALQLLDSLHPGSVPMSKVDWTAKQDFQFVGNYKILQNSFDKLGVGKHVDVDKLIRAKYQDNLEFMQWFKRYHQSVGMATDYDPVAARAGGKGAPGATGCAAPASA 614
VGR+EI++WIN TLQLNL+ +EQTASG VA QLLD ++PG VP++KV+W AK D++F+ NYK+LQ +F KL + KH+ V+KL+RAKYQDNLEFMQWFKR+++ A DYDPV ARAGGKGA G PA+A
Sbjct: 46 VGRKEIVDWINETLQLNLTKVEQTASGAVACQLLDRIYPGKVPLNKVNWEAKLDYEFLSNYKLLQTAFTKLQIDKHLPVEKLVRAKYQDNLEFMQWFKRFYELNNPALDYDPVVARAGGKGAGGPARTIPPAAA 179
BLAST of mRNA_P-wetherbeei_contig1586.3.2 vs. uniprot
Match: A0A6G0XJ14_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJ14_9STRA) HSP 1 Score: 174 bits (441), Expect = 9.170e-49 Identity = 128/279 (45.88%), Postives = 173/279 (62.01%), Query Frame = 3
Query: 213 VGRREILEWINGTLQLNLSTIEQTASGCVALQLLDSLHPGSVPMSKVDWTAKQDFQFVGNYKILQNSFDKLGVGKHVDVDKLIRAKYQDNLEFMQWFKRYHQ-SVGMATDYDPVAARAGGKGAPGATGCAAPASARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSAPAGMETS----AQVAADLAAKEERIAALTHEVSEMLAAH-------QTVERERDFYFEKLRDVEVLLQLREEHGHPVEGAADVFKILYASQ 1013
VGR+EIL+WIN T L+L+ +EQT +G VA QLLD+L+PG VPMSKVDW+A +D++++ NYK+LQ +F L + +H++VDKLIR KYQDNLEFMQWFKR+++ ++G A+DYDP+A R GKG G A A R XXXXXXXXXXXXXXXXX AP +E A+ +D AA +E + T E E+ A+ + +E+ERDFYF KLRD+E +LQ +E H + +F+ILYA++
Sbjct: 17 VGRKEILDWINSTCGLSLTKVEQTCTGAVACQLLDALYPGKVPMSKVDWSANKDYEYIQNYKVLQKAFTTLKIDRHIEVDKLIRGKYQDNLEFMQWFKRFYELNIGGASDYDPIAQRDKGKG-----GAAYSAKYRPGGGXXXXXXXXXXXXXXXXXRPVGTKPSARPP-----------------GAPTSVEKEKAGGARRTSDSAASKE-LEEFTRENEELSEANGILRGQIEGLEKERDFYFGKLRDIEAMLQELDESQH-TDVIKKIFEILYAAE 271
BLAST of mRNA_P-wetherbeei_contig1586.3.2 vs. uniprot
Match: A0A0P1A9J2_PLAHL (Microtubule associated protein eb1 n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1A9J2_PLAHL) HSP 1 Score: 174 bits (442), Expect = 9.810e-49 Identity = 122/281 (43.42%), Postives = 169/281 (60.14%), Query Frame = 3
Query: 213 VGRREILEWINGTLQLNLSTIEQTASGCVALQLLDSLHPGSVPMSKVDWTAKQDFQFVGNYKILQNSFDKLGVGKHVDVDKLIRAKYQDNLEFMQWFKRYHQSVGMATDYDPVAARAGGKGAP------GATGCAAPASARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSAPAGMETSAQVAADLAAKEERIA-------ALTHEVSEMLAAHQTVERERDFYFEKLRDVEVLLQLREE-HGHPVEGAADVFKILYASQ 1013
VGR+EIL+WIN ++LS +EQT +G VA Q+LD+++PG V MSKVDW+A +D++++ NYK+LQ +F +L + KHV+VD+L+R KYQDNLEFMQWFK +++ YDPVA R GKG G T A PA XXXXXXXXXXXXXX + +A ++T A VAA A E+ + ALT+E E+ A +++E+ERDFYF KLR+VE++LQ E +P+ A +FK+LYA++
Sbjct: 15 VGRKEILDWINTLCGISLSKVEQTCTGAVACQILDAMYPGKVQMSKVDWSANKDYEYIQNYKVLQKAFMQLKIDKHVEVDRLVRGKYQDNLEFMQWFKAFYERNASGQPYDPVAQREKGKGGAQYTQKYGGTSAAGPA--------VPLRRKVGAATTSRVGRTPPXXXXXXXXXXXXXXASRRPIGTTTMTAQIEVDTEAAVAAATAPLEKELEELTATNEALTNEGGELRAMVESLEKERDFYFNKLREVEIMLQSAENSEANPL--AQSIFKVLYATE 285
BLAST of mRNA_P-wetherbeei_contig1586.3.2 vs. uniprot
Match: H3GGV9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GGV9_PHYRM) HSP 1 Score: 174 bits (440), Expect = 1.650e-48 Identity = 107/281 (38.08%), Postives = 156/281 (55.52%), Query Frame = 3
Query: 213 VGRREILEWINGTLQLNLSTIEQTASGCVALQLLDSLHPGSVPMSKVDWTAKQDFQFVGNYKILQNSFDKLGVGKHVDVDKLIRAKYQDNLEFMQWFKRYHQSVGMATDYDPVAARAGGKGAP------GATGCAAPASARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSAPAGMETSAQVAADLAAKEERIA-------ALTHEVSEMLAAHQTVERERDFYFEKLRDVEVLLQLREE-HGHPVEGAADVFKILYASQ 1013
VGR+EIL+WIN NL+ +EQT +G VA Q+LD+++PG V MSKVDW A +D++++ NYK+LQ +F +L + KHV+VD+L+R KYQDNLEFMQWFK +++ YDP++ R GKG G +G ++ A A S A + ++T A VAA A E+ + ALT+E E+ A +++E+ERDFYF KLR+VE++LQ E+ +P+ A VFK+LYA++
Sbjct: 10 VGRKEILDWINNLCATNLAKVEQTCTGAVACQILDAMYPGKVQMSKVDWAANKDYEYIQNYKVLQKAFMQLKIDKHVEVDRLVRGKYQDNLEFMQWFKAFYERNASGQSYDPLSQRDKGKGGAQFTQKFGGSGVSSSAPAAPARRKVGAATTSRVGRTPPAAPAAARASRTPTGVSRRPTG--------SAGAVSAVDTEAAVAAATAPLEKELEELTTTNEALTNESGELRAMVESLEKERDFYFNKLREVEIMLQAAEDTESNPL--AQAVFKVLYAAE 280
BLAST of mRNA_P-wetherbeei_contig1586.3.2 vs. uniprot
Match: D7FHD5_ECTSI (Putative microtubule-associated protein EB1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHD5_ECTSI) HSP 1 Score: 174 bits (440), Expect = 2.820e-48 Identity = 144/266 (54.14%), Postives = 180/266 (67.67%), Query Frame = 3
Query: 213 VGRREILEWINGTLQLNLSTIEQTASGCVALQLLDSLHPGSVPMSKVDWTAKQDFQFVGNYKILQNSFDKLGVGKHVDVDKLIRAKYQDNLEFMQWFKRYHQSVGMATDYDPVAARAGGKGAPGATGCAAPASARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSAPAGMETSAQVAADLAAKEERIAALTHEVSEMLAAHQTVERERDFYFEKLRDVEVLLQLREEHGHPVEGAADVFKILYAS 1010
VGR+EIL+W+N L LNLS +E+T SG VA QL+DSL PG VPMSKV+W A+ D +++ NYK+LQ++FD+L + KH+DV +L R KY DNLEFMQWFK +H + G YD V R+ G+G GA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SR+APA +SA+ + + LT E E+L VE+ERDFYF+KLRD+E+L Q E+ + + FKILYA+
Sbjct: 14 VGRKEILDWLNSYLSLNLSKVEETCSGAVACQLVDSLFPGKVPMSKVNWDARNDSEYINNYKVLQSAFDRLHIDKHIDVQRLTRGKYMDNLEFMQWFKNFHDTTGAMEGYDAVERRSKGRG--GAK------YGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPASSTLKSRAAPA--RSSARAPSPDPQLVAKCDELTQERDELLTTMAAVEKERDFYFDKLRDIELLFQNDEQESGESDLTKNAFKILYAT 269
BLAST of mRNA_P-wetherbeei_contig1586.3.2 vs. uniprot
Match: D0NQL6_PHYIT (Microtubule-associated protein EB1 n=11 Tax=Phytophthora TaxID=4783 RepID=D0NQL6_PHYIT) HSP 1 Score: 172 bits (437), Expect = 6.700e-48 Identity = 105/282 (37.23%), Postives = 153/282 (54.26%), Query Frame = 3
Query: 213 VGRREILEWINGTLQLNLSTIEQTASGCVALQLLDSLHPGSVPMSKVDWTAKQDFQFVGNYKILQNSFDKLGVGKHVDVDKLIRAKYQDNLEFMQWFKRYHQSVGMATDYDPVAARAGGKGAP-------GATGCAAPASARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSAPAGMETSAQVAADLAAKEERIA-------ALTHEVSEMLAAHQTVERERDFYFEKLRDVEVLLQLREEH-GHPVEGAADVFKILYASQ 1013
VGR+EIL+WIN +NLS +EQT +G VA Q+LD+++PG V MSKVDW A +D++++ NYK+LQ +F +L + KHV+VD+L+R KYQDNLEFMQWFK +++ YDP+A R GKG G + PA+ XX P+ +T A A E+ + ALT+E E+ A +++E+ERDFYF KLR+VE++LQ E++ +P+ A +FK+LYA++
Sbjct: 15 VGRKEILDWINSLCAINLSKVEQTCTGAVACQILDAMYPGKVQMSKVDWAANKDYEYIQNYKVLQKAFMQLKIDKHVEVDRLVRGKYQDNLEFMQWFKAFYERNASGQPYDPIAQREKGKGGAQYTQKFGGGASSSTPAAPLRRKVGATATSRVGRTPPGAPTSAGAARTARTSTGATRRPVGSAASAXXXXXXPSEADTEAXXXXXXAPLEKELEELTANNEALTNESGELRAMVESLEKERDFYFNKLREVEIMLQAAEDNESNPL--AQAIFKVLYATE 294 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1586.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1586.3.2 >prot_P-wetherbeei_contig1586.3.2 ID=prot_P-wetherbeei_contig1586.3.2|Name=mRNA_P-wetherbeei_contig1586.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=224bp MSKVDWTAKQDFQFVGNYKILQNSFDKLGVGKHVDVDKLIRAKYQDNLEFback to top mRNA from alignment at P-wetherbeei_contig1586:4958..6929+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1586.3.2 ID=mRNA_P-wetherbeei_contig1586.3.2|Name=mRNA_P-wetherbeei_contig1586.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1972bp|location=Sequence derived from alignment at P-wetherbeei_contig1586:4958..6929+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1586:4958..6929+ >mRNA_P-wetherbeei_contig1586.3.2 ID=mRNA_P-wetherbeei_contig1586.3.2|Name=mRNA_P-wetherbeei_contig1586.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=672bp|location=Sequence derived from alignment at P-wetherbeei_contig1586:4958..6929+ (Phaeothamnion wetherbeei SAG_119_79)back to top |