mRNA_P-wetherbeei_contig15815.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15815.1.1
Unique NamemRNA_P-wetherbeei_contig15815.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15815.1.1 vs. uniprot
Match: A0A7X9AFI2_9BURK (RNA methyltransferase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X9AFI2_9BURK)

HSP 1 Score: 159 bits (401), Expect = 5.550e-44
Identity = 104/259 (40.15%), Postives = 147/259 (56.76%), Query Frame = 1
Query:   13 LGKNHPALKDLRRLREPGERRRQGLFLVEGVRLLEEASASPCFLERLFYRTDRLKDERVARLVSRHSGRATE---LAAESLSKLSETEQDQGLIAVLRIPSAGAVADLKS--LLVLEAVSDPGNVGTLIRAARAAGVGGVALLGGVEAFNSKVVRSSAGAIFYLPVFQ------GLSVDSIVEAGFTLLAAVARDGEDYYECALPSRPAWAMGGEADGLSASLLAAGPVRVTLPMEGDCESLNVAMAGTLMMFDWRRRV 756
            LG+++P LK LR L  P  R R G FL+EGVR+L EA      L+ L       ++  V  L +R +    E   L AE L +L+ T   QGL+ V RIP       L+   +L+LE + DPGN GTL+R ARAAG GG  L+GG + FN + VR++AGA F  P+ +       + + ++ +AGF L  A A  G+D Y+ + P R A  +GGE  G+S +   A   R T+P+   CESLNVA A  +++F+ RRR+
Sbjct:   15 LGRHNPRLKRLRELDTPAGRYRTGSFLLEGVRILAEALEGGLDLQWLLVAQGASRE--VFDLAARAARTGVEVCLLDAEVLERLAPTRSSQGLLGVARIPRTDLQQVLRGNPVLLLEGIQDPGNTGTLLRTARAAGAGGAILVGGADPFNPRTVRAAAGATFRFPLVRLEPQQVPMLLQALDQAGFELACAEAHGGQDLYQASFPKRMALVLGGEVRGVSEACRRAAVARWTIPLAHGCESLNVAAAAAVILFEARRRL 271          
BLAST of mRNA_P-wetherbeei_contig15815.1.1 vs. uniprot
Match: A0A1Q6R1W1_9FIRM (SpoU_sub_bind domain-containing protein n=6 Tax=Phascolarctobacterium TaxID=33024 RepID=A0A1Q6R1W1_9FIRM)

HSP 1 Score: 154 bits (388), Expect = 2.920e-42
Identity = 103/257 (40.08%), Postives = 157/257 (61.09%), Query Frame = 1
Query:   16 GKNHPALKDLRRLREPGERRRQGLFLVEGVRLLEEASASPCFLERLFYRTDRLKDERVARLVSRHSGRATELAAES---LSKLSETEQDQGLIAVLRIPSAGA---VADLKSLLVLEAVSDPGNVGTLIRAARAAGVGGVALLGG-VEAFNSKVVRSSAGAIFYLPVFQGLSVDSIVEA----GFTLLAAVARDGEDYYECALPSRPAWAMGGEADGLSASLLAAGPVRVTLPMEGDCESLNVAMAGTLMMFDWRRR 753
            G  +P +K    L++   R++QGLFL EG+R +EEA      ++ +FY    ++D+R   ++   + +  +L   S   L K+++TE  QG+IAV  + S      +A  K LLVL+ V+DPGN+GT++R A AAGVGG+ LL G  + +  K VR+S G++F+LPV  GLS + +V+A    G+ LL       ++ Y+  L  R A+ MG EA+G+S +LLAA   RV +PM+G  ESLNVAMA  ++MF+  R+
Sbjct:    5 GLQNPMVKAAAELKQKKYRQQQGLFLAEGLRTVEEAVRYGA-VQSIFYTA--IEDDRTRAVLEEAAAKQIKLVCVSDKVLKKIADTETPQGIIAVCEMRSKRLDDFLASGKMLLVLDRVTDPGNIGTMLRTADAAGVGGLLLLQGCADIYAPKTVRASMGSLFHLPVLSGLSEELLVQAARKAGYELLVTCLDGADNLYKADLQGRLAFVMGNEANGVSPALLAAADKRVFIPMQGRAESLNVAMAAGIVMFEALRQ 258          
BLAST of mRNA_P-wetherbeei_contig15815.1.1 vs. uniprot
Match: A0A7C7DG38_9FIRM (RNA methyltransferase n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C7DG38_9FIRM)

HSP 1 Score: 147 bits (371), Expect = 1.240e-39
Identity = 98/261 (37.55%), Postives = 153/261 (58.62%), Query Frame = 1
Query:    1 MPSALGKNHPALKDLRRLREPGERRRQGLFLVEGVRLLEEASASPCFLERLFYRTDRLKDERVARLVSRHSGRAT--ELAAESLSKLSETEQDQGLIAVLRIPS---AGAVADLKSLLVLEAVSDPGNVGTLIRAARAAGVGGVALLGG-VEAFNSKVVRSSAGAIFYLPVFQGLSVDSIVEA----GFTLLAAVARDGEDYYECALPSRPAWAMGGEADGLSASLLAAGPVRVTLPMEGDCESLNVAMAGTLMMFDWRRR 753
            M     + +P LK  R L +   R ++G +LVEG+RLLEEA A+   +E +F+    L  ER  RL+    GRA    ++ E+L+ L+ET+  QG++AV++ P    A  +A+   LL+++ + DPGN+GT++R A AAG  G  L  G V+ FN KV+RSS GA+F LPVF G  + +++E     G+ L+AA       Y+E A     A  +G EA G+   +LA    RV +P++   +SLN A+A  +++++W R+
Sbjct:    1 MKEITSRANPLLKYARSLHKGKNREQEGKYLVEGIRLLEEAVATGVDIEAVFFTDRLLARERGERLLRECRGRADCYRVSEEALASLAETDSPQGVVAVVKYPRWDRAALLAEGGLLLLVDRIQDPGNLGTMLRTAEAAGCRGAILSPGTVDPFNGKVLRSSMGAVFRLPVFAGEDLPALLEELKGRGYQLVAADVGGSIPYWEAAFRLPGALVVGNEAWGVGEEILARVEERVRIPLKKGVDSLNAAVAAGIILYEWARQ 261          
BLAST of mRNA_P-wetherbeei_contig15815.1.1 vs. uniprot
Match: A0A5S4ZR50_9FIRM (TrmH family RNA methyltransferase n=1 Tax=Desulfallas thermosapovorans DSM 6562 TaxID=1121431 RepID=A0A5S4ZR50_9FIRM)

HSP 1 Score: 136 bits (342), Expect = 2.400e-35
Identity = 96/263 (36.50%), Postives = 151/263 (57.41%), Query Frame = 1
Query:   19 KNHPALKDLRRLREPGERRRQGLFLVEGVRLLEEASASPCFLERLFYRTDRLKDERVARLVSRHSGRATELAA---ESLSKLSETEQDQGLIAVLRIPSAGAV------ADLKSLLVL-EAVSDPGNVGTLIRAARAAGVGGVALL-GGVEAFNSKVVRSSAGAIFYLPVFQGLSVDSIV----EAGFTLLAAVARDGEDYYECALPSRPAWAMGGEADGLSASLLAAGPVRVTLPMEGDCESLNVAMAGTLMMFDW-RRRVR 759
            K +P +K +RRL     R ++G F++EGVR LEEA      LE + Y        R  RL+ +   R   L A   +   +L++T+  QGL+AV  +P+ G +      A+ + LLVL + + DPGN+GT+IR A AAG GGV ++ G V+ +N+K +RS+ G+IF++P++    ++S++    EAG+ L+      G+  + C L  R    +G EADG+SA +  A   RV +PM G  ESLN  +A  +M+++  R+R R
Sbjct:    5 KQNPHIKYVRRLARRKFREQEGKFIIEGVRFLEEAVQVDWPLELVLYTGGTAGQARAGRLLDKLHRRGVPLLAVDDKLFRELADTQSPQGLLAVACVPAMGDMDPRVWAAEGRDLLVLVDGLRDPGNLGTVIRCADAAGAGGVLIMKGSVDPYNTKTLRSTMGSIFHVPLYPVPDLESLLPRLQEAGWKLVVGEPAAGKLIHRCDLTGRVVLVVGSEADGVSALVCRAAGERVRIPMPGRAESLNAGVAAGIMLYEAVRQRTR 267          
BLAST of mRNA_P-wetherbeei_contig15815.1.1 vs. uniprot
Match: A0A1M5BYJ8_9FIRM (RNA methyltransferase, TrmH family n=2 Tax=Desulfofundulus TaxID=2282741 RepID=A0A1M5BYJ8_9FIRM)

HSP 1 Score: 135 bits (340), Expect = 5.230e-35
Identity = 100/253 (39.53%), Postives = 147/253 (58.10%), Query Frame = 1
Query:   19 KNHPALKDLRRLREPGERRRQGLFLVEGVRLLEEASASPCFLERLFYRTDRLKDERVARLVSRHSGRATELAA--ESLSK-LSETEQDQGLIAVLRIPS---AGAVADLKSLLVL-EAVSDPGNVGTLIRAARAAGVGGVALLGG-VEAFNSKVVRSSAGAIFYLPVFQGLSVDSIVE----AGFTLLAAVARDGEDYYECALPSRPAWAMGGEADGLSASLLAAGPVRVTLPMEGDCESLNVAMAGTLMMFD 741
            KN+P +K LRRL    +R ++G FL+EGVRL+EEA  S   ++ L Y       ER   L+     R  +L    E L + L++T+  QG++AV++ P     G +A   SLL+L + V DPGN+GT+IR+A AAG GGV LL G V+ +N K +R++ G++F+LPV      + +V     AGF L+A V   G       +      A+G EA G+S  LL    ++ T+PM G  ESLNVAMA ++M+++
Sbjct:    5 KNNPKIKYLRRLARRRQREKEGHFLLEGVRLIEEALRSGWPVKMLVYTPP--PGERAGALLELAGERGVQLMPVDEGLFRELADTQTPQGVLAVVQSPGYTPEGLLAGGASLLLLVDGVQDPGNLGTMIRSASAAGAGGVLLLPGTVDLYNPKTIRATMGSLFHLPVLGVREGEELVARLKAAGFLLVAGVPAGGVPLPAVDMTGPTVLAVGNEARGISPWLLQYADIQATIPMPGRAESLNVAMAASIMLYE 255          
BLAST of mRNA_P-wetherbeei_contig15815.1.1 vs. uniprot
Match: A0A353QD51_9FIRM (RNA methyltransferase n=5 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A353QD51_9FIRM)

HSP 1 Score: 135 bits (340), Expect = 5.910e-35
Identity = 97/256 (37.89%), Postives = 144/256 (56.25%), Query Frame = 1
Query:   22 NHPALKDLRRLREPGERRRQGLFLVEGVRLLEEASASPCF-LERLFYRTDRLKDERVARLVSRHSGRA---TELAAESLSKLSETEQDQGLIAVLRIPSAGAVADLKS---LLVLEAVSDPGNVGTLIRAARAAGVGGVALL-GGVEAFNSKVVRSSAGAIFYLPVFQGLSVDSIVEAG----FTLLAAVARDGEDYYECALPSRPAWAMGGEADGLSASLLAAGPVRVTLPMEGDCESLNVAMAGTLMMFDWRRR 753
            ++P +K +  L    ER   GLFL+EG  LL+EA AS    +ER++      +     + + R + RA   TEL+ ++ SK +ETE  QG++AV  +P+ G + DL +   +L L+ V DPGNVGT+IR A AAG GGV +  GG + F+ KVVR+S GAIF LPV   +    +VE        ++      GE YYE  L       +G E+ G+S+ +  A    V +P+ G  ESLNVA+A  +++F+  R+
Sbjct:    8 SNPEIKQIAALHRTKERNAAGLFLIEGPHLLQEALASDLVKIERIYVTERYAQTSEGLQCLQRAAQRAITLTELSEQAFSKAAETETPQGVLAVAALPNVG-LDDLPANQIVLFLDRVQDPGNVGTMIRTAAAAGAGGVIVADGGSDPFSGKVVRASQGAIFTLPVAARIPSAEVVEWAARKRLPIICTSPHAGEVYYETNLSGAGLLVLGHESQGISSEMTNAADKLVRIPIIGRAESLNVAIAAAVLLFEAARQ 262          
BLAST of mRNA_P-wetherbeei_contig15815.1.1 vs. uniprot
Match: UPI001BEFF1D2 (RNA methyltransferase n=1 Tax=Gelria sp. Kuro-4 TaxID=2796927 RepID=UPI001BEFF1D2)

HSP 1 Score: 135 bits (339), Expect = 8.110e-35
Identity = 102/260 (39.23%), Postives = 145/260 (55.77%), Query Frame = 1
Query:    1 MPSALGKNHPALKDLRRLREPGERRRQGLFLVEGVRLLEEASASPCFLERLFYRTDRLKDERVARLVSR--HSG-RATELAAESLSKLSETEQDQGLIAVLRIP---SAGAVADLKSLLVL-EAVSDPGNVGTLIRAARAAGVGGVAL-LGGVEAFNSKVVRSSAGAIFYLPVF----QGLSVD-SIVEAGFTLLAAVARDGEDYYECALPSRPAWAMGGEADGLSASLLAAGPVRVTLPMEGDCESLNVAMAGTLMMFD 741
            M     +++P +K +R LR    RR +G FLVEGVRLLEEA A+   LE +    +     R   L++R   SG R   ++A  L+ ++ETE  QGL+AV  +P   S  A+ +   L+VL E + DPGN GTLIRAA AAG GGV    G V  F SKVVR+S G++F LPV      G  +  S   AG+ ++      G  +++  + +     +G E  G+SA L A G  R  +P+    ESLNVA+AG +++F+
Sbjct:    1 MEMITSRHNPLVKAVRALRSTKLRRSEGRFLVEGVRLLEEALAAGLNLETVLVCPELAVGTRAQALLTRLRESGVRWVPVSASVLASVAETETPQGLVAVASLPGPPSVSALLEATDLVVLGEGIQDPGNAGTLIRAAEAAGAGGVCFSAGSVYPFGSKVVRASMGSLFRLPVIALGDNGKELAASCRAAGWEVVVTTPAGGTPFWQVPMAAPTLVVLGNEGAGVSAELTALGSQRAFIPLAQPVESLNVAVAGAVILFE 260          
BLAST of mRNA_P-wetherbeei_contig15815.1.1 vs. uniprot
Match: A0A355TPJ3_9BACT (SpoU_sub_bind domain-containing protein n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TPJ3_9BACT)

HSP 1 Score: 132 bits (333), Expect = 4.680e-34
Identity = 89/259 (34.36%), Postives = 147/259 (56.76%), Query Frame = 1
Query:   13 LGKNHPALKDLRRLREPGERRRQGLFLVEGVRLLEEASASPCFLERLFYRTDRLKDERVARLVS----RHSGRATELAAESLSK-LSETEQDQGLIAVLRIPSAGA--VADLKSLLVLEAVSDPGNVGTLIRAARAAGVGGVALLGGVEAFNSKVVRSSAGAIFYLPVFQ--GLSVDS----IVEAGFTLLAAVARDGEDYYECALPSRPAWAMGGEADGLSASLLAAGPVRVTLPMEGDCESLNVAMAGTLMMFDWRR 750
            +G++   +K+++RL  P  R   G FLVEG+R++EE  +S   +  L   ++RL    +A+       +  G +  +AA+SL + LS  +  QG++AV+ +P      +  +  LLVL  V DPGNVGTLIR+  A G     + GG + FN++ VRS+AGA+F++PV +     +DS    + + GFTL+ A A  G++  +   P++ A  +G E  G+  S  +   ++V +P+    ESLNVA AG ++M++  R
Sbjct:    6 IGRHSRLVKEIKRLDSPSHRLETGRFLVEGIRVVEELLSSDLDIVHLLI-SERLLASEIAQWAEEVKRKRPGASVWIAADSLMQDLSCAKTSQGVLAVVELPEVKPEDILQVSRLLVLSQVQDPGNVGTLIRSGLAFGFEAALICGGADPFNARAVRSAAGAVFHMPVLRVDERDLDSWSQDLRDEGFTLITAEAHGGQNIKDVNFPAKSALILGAEVKGVDKSWRSKEHIKVHIPLSAKSESLNVAAAGAVIMYEMAR 263          
BLAST of mRNA_P-wetherbeei_contig15815.1.1 vs. uniprot
Match: A0A1E4FC52_9BACT (SpoU_sub_bind domain-containing protein n=1 Tax=bacterium SCN 62-11 TaxID=1660156 RepID=A0A1E4FC52_9BACT)

HSP 1 Score: 131 bits (330), Expect = 6.750e-34
Identity = 93/246 (37.80%), Postives = 139/246 (56.50%), Query Frame = 1
Query:   13 LGKNHPALKDLRRLREPGERRRQGLFLVEGVRLLEEASASPCFLERLFYRTDRLKDERVARLVSRHSGRATELAAESLSKLSETEQDQGLIAVLRIPSAGAVADLKSLLVLEAVSDPGNVGTLIRAARAAGVGGVALLGGVEAFNSKVVRSSAGAIFYLPVFQGLSVDSIVEAGFTLLAAVARDGEDYYECALPSRPAWAMGGEADGLSASLLAAGPVRVTLPMEGDCESLNVAMAGTLMMFDWRR 750
            LGK+ P LK L +L +   RR  GLFLVEG +LL EA      L+ +F+  D  + +    +   H      + +E L ++S+  Q  G++ VL       +     L+V + +SDPGN+GTL+R+A AAG+  +  LGGV+ FN KVVR+SAGAIF+ PVF+  S + +  A + L+    R G D Y    P R    +G EA GL+ ++        T+PME  CESLN A + ++++F++RR
Sbjct:    4 LGKHSPKLKQLLQLDKASVRRDLGLFLVEGPKLLLEAHNGHHQLKEIFF--DPARHDLDLGVPGWH------VDSEQLDRVSDAHQ--GVVGVLEARPWPDLQQYNRLVVADGLSDPGNLGTLMRSAWAAGMEALVCLGGVDPFNPKVVRASAGAIFHFPVFRLKSGEEL--ADYPLVGLSPRGGRDLYSMHWPRRWGLVVGNEAHGLNLNV----QTLCTIPMEHGCESLNAATSASIVLFEYRR 233          
BLAST of mRNA_P-wetherbeei_contig15815.1.1 vs. uniprot
Match: A0A1I6E8M0_9FIRM (RNA methyltransferase, TrmH family n=1 Tax=Desulfoscipio geothermicus DSM 3669 TaxID=1121426 RepID=A0A1I6E8M0_9FIRM)

HSP 1 Score: 132 bits (333), Expect = 7.230e-34
Identity = 92/260 (35.38%), Postives = 151/260 (58.08%), Query Frame = 1
Query:   19 KNHPALKDLRRLREPGERRRQGLFLVEGVRLLEEASASPCFLERLFYRTDRLKDERVARLVSRHSGRAT---ELAAESLSKLSETEQDQGLIAVLRIPSAGAV------ADLKSLLVL-EAVSDPGNVGTLIRAARAAGVGGVALLGGV-EAFNSKVVRSSAGAIFYLPVFQGLSVDSIVE----AGFTLLAAVARDGEDYYECALPSRPAWAMGGEADGLSASLLAAGPVRVTLPMEGDCESLNVAMAGTLMMFDWRRR 753
            K +P +K +RRL +   R  +G F++EGVR LEEA      +E + +        R ARL+   + R     E+A    ++L++T+  QG++AV+++P  GA        + + LLVL + + DPGN+GT+IR A AAGV  V LL GV + +N+K +R++ G++F++P+F     D ++E     G++L+       +  ++C L  R A A+G EADG+S ++L A   RV +PM G  ESLN  +A  +M+++  R+
Sbjct:    5 KQNPRIKYVRRLVQRKFRESEGKFVIEGVRFLEEAVKVDWPVEMVLHTPRAAGSLRAARLLELLAERGVPVREVAEGIFAELADTDTPQGVLAVVKMPRRGAFDPAARGGESRDLLVLVDGIRDPGNLGTIIRCADAAGVDAVILLKGVVDPYNAKTLRATMGSVFHVPLFTAPDRDRLLEELHAGGWSLVVGDLSSEKLVHQCDLTGRVALAVGSEADGVSEAVLQAARERVRIPMPGRAESLNAGVAAGIMLYETVRQ 264          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15815.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X9AFI2_9BURK5.550e-4440.15RNA methyltransferase n=1 Tax=Burkholderiales bact... [more]
A0A1Q6R1W1_9FIRM2.920e-4240.08SpoU_sub_bind domain-containing protein n=6 Tax=Ph... [more]
A0A7C7DG38_9FIRM1.240e-3937.55RNA methyltransferase n=1 Tax=Firmicutes bacterium... [more]
A0A5S4ZR50_9FIRM2.400e-3536.50TrmH family RNA methyltransferase n=1 Tax=Desulfal... [more]
A0A1M5BYJ8_9FIRM5.230e-3539.53RNA methyltransferase, TrmH family n=2 Tax=Desulfo... [more]
A0A353QD51_9FIRM5.910e-3537.89RNA methyltransferase n=5 Tax=Firmicutes bacterium... [more]
UPI001BEFF1D28.110e-3539.23RNA methyltransferase n=1 Tax=Gelria sp. Kuro-4 Ta... [more]
A0A355TPJ3_9BACT4.680e-3434.36SpoU_sub_bind domain-containing protein n=1 Tax=ba... [more]
A0A1E4FC52_9BACT6.750e-3437.80SpoU_sub_bind domain-containing protein n=1 Tax=ba... [more]
A0A1I6E8M0_9FIRM7.230e-3435.38RNA methyltransferase, TrmH family n=1 Tax=Desulfo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15815contigP-wetherbeei_contig15815:399..1160 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog626939.HMPREF9443_00729
PFAMsSpoU_methylase,SpoU_sub_bind
Model size762
Max annot lvl909932|Negativicutes
KEGG koko:K03437
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.78e-43
EggNOG OGsCOG0566@1|root,COG0566@2|Bacteria,1V3JP@1239|Firmicutes,4H3JJ@909932|Negativicutes
DescriptionBelongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Cds size762
COG categoryJ
BRITEko00000,ko03016
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186068.3479936-CDS-P-wetherbeei_contig15815:398..11601683186068.3479936-CDS-P-wetherbeei_contig15815:398..1160Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15815 399..1160 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15815.1.1prot_P-wetherbeei_contig15815.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15815 399..1160 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15815.1.1

>prot_P-wetherbeei_contig15815.1.1 ID=prot_P-wetherbeei_contig15815.1.1|Name=mRNA_P-wetherbeei_contig15815.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=254bp
MPSALGKNHPALKDLRRLREPGERRRQGLFLVEGVRLLEEASASPCFLER
LFYRTDRLKDERVARLVSRHSGRATELAAESLSKLSETEQDQGLIAVLRI
PSAGAVADLKSLLVLEAVSDPGNVGTLIRAARAAGVGGVALLGGVEAFNS
KVVRSSAGAIFYLPVFQGLSVDSIVEAGFTLLAAVARDGEDYYECALPSR
PAWAMGGEADGLSASLLAAGPVRVTLPMEGDCESLNVAMAGTLMMFDWRR
RVR*
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mRNA from alignment at P-wetherbeei_contig15815:399..1160+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15815.1.1 ID=mRNA_P-wetherbeei_contig15815.1.1|Name=mRNA_P-wetherbeei_contig15815.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=762bp|location=Sequence derived from alignment at P-wetherbeei_contig15815:399..1160+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGTCCGCGCTCGGCAAGAACCATCCGGCTTTGAAGGACCTGCGCCG CCTTCGCGAGCCGGGCGAGAGGCGTCGGCAGGGGCTTTTCCTGGTGGAGG GGGTGCGCTTGCTCGAGGAGGCCTCGGCCTCGCCCTGTTTCTTGGAGCGG CTCTTCTACCGCACGGACCGATTGAAGGACGAGCGCGTCGCGCGCCTGGT TTCGCGGCATTCAGGGCGCGCCACGGAGTTGGCTGCCGAGTCTTTGAGCA AGCTCAGCGAGACCGAACAGGATCAGGGTCTGATTGCAGTTCTGCGCATC CCCTCGGCGGGGGCCGTTGCAGACCTGAAGTCGCTGCTGGTGTTGGAGGC GGTCTCGGACCCGGGGAATGTTGGGACCCTTATCCGCGCGGCCCGCGCTG CGGGTGTCGGAGGCGTGGCGCTGCTCGGTGGGGTAGAGGCCTTCAACTCC AAGGTCGTGCGCTCGTCGGCGGGGGCCATCTTTTATTTGCCGGTCTTCCA GGGCCTCAGTGTTGACTCCATTGTGGAAGCCGGATTCACTCTGCTGGCCG CCGTCGCGCGCGACGGCGAGGACTACTATGAGTGCGCTCTGCCTTCTCGG CCCGCCTGGGCTATGGGCGGGGAAGCCGACGGACTCTCCGCATCGCTTCT GGCGGCGGGACCCGTGCGCGTTACTCTGCCGATGGAGGGCGACTGCGAGT CGCTCAACGTGGCGATGGCGGGAACCCTGATGATGTTCGACTGGCGCCGC CGGGTCAGGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15815:399..1160+

>mRNA_P-wetherbeei_contig15815.1.1 ID=mRNA_P-wetherbeei_contig15815.1.1|Name=mRNA_P-wetherbeei_contig15815.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=762bp|location=Sequence derived from alignment at P-wetherbeei_contig15815:399..1160+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGTCCGCGCTCGGCAAGAACCATCCGGCTTTGAAGGACCTGCGCCG
CCTTCGCGAGCCGGGCGAGAGGCGTCGGCAGGGGCTTTTCCTGGTGGAGG
GGGTGCGCTTGCTCGAGGAGGCCTCGGCCTCGCCCTGTTTCTTGGAGCGG
CTCTTCTACCGCACGGACCGATTGAAGGACGAGCGCGTCGCGCGCCTGGT
TTCGCGGCATTCAGGGCGCGCCACGGAGTTGGCTGCCGAGTCTTTGAGCA
AGCTCAGCGAGACCGAACAGGATCAGGGTCTGATTGCAGTTCTGCGCATC
CCCTCGGCGGGGGCCGTTGCAGACCTGAAGTCGCTGCTGGTGTTGGAGGC
GGTCTCGGACCCGGGGAATGTTGGGACCCTTATCCGCGCGGCCCGCGCTG
CGGGTGTCGGAGGCGTGGCGCTGCTCGGTGGGGTAGAGGCCTTCAACTCC
AAGGTCGTGCGCTCGTCGGCGGGGGCCATCTTTTATTTGCCGGTCTTCCA
GGGCCTCAGTGTTGACTCCATTGTGGAAGCCGGATTCACTCTGCTGGCCG
CCGTCGCGCGCGACGGCGAGGACTACTATGAGTGCGCTCTGCCTTCTCGG
CCCGCCTGGGCTATGGGCGGGGAAGCCGACGGACTCTCCGCATCGCTTCT
GGCGGCGGGACCCGTGCGCGTTACTCTGCCGATGGAGGGCGACTGCGAGT
CGCTCAACGTGGCGATGGCGGGAACCCTGATGATGTTCGACTGGCGCCGC
CGGGTCAGGTAG
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