mRNA_P-wetherbeei_contig1579.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1579.1.1
Unique NamemRNA_P-wetherbeei_contig1579.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1579.1.1 vs. uniprot
Match: A0A836CDL1_9STRA (Fructose-bisphosphate aldolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDL1_9STRA)

HSP 1 Score: 135 bits (341), Expect = 8.020e-37
Identity = 65/85 (76.47%), Postives = 73/85 (85.88%), Query Frame = 1
Query:    1 GLDAGVPPPKVVADWTVKVMKRTIPAAVPGIHFLSGGMSEEEATLNLQALQDAYPTAPWSLTFSYGRALQSSTMKSWDGKEASIA 255
            GLDA +PPP VVA +TV VMKRTIP AVPGIHFLSGGMS EE+TLNLQALQ+AYP +PWSLTFSYGRALQS T+K+W GK  + A
Sbjct:  236 GLDAEIPPPDVVAKYTVMVMKRTIPPAVPGIHFLSGGMSAEESTLNLQALQEAYPNSPWSLTFSYGRALQSPTLKTWQGKPENKA 320          
BLAST of mRNA_P-wetherbeei_contig1579.1.1 vs. uniprot
Match: A0A0D2LML1_9CHLO (Fructose-bisphosphate aldolase n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2LML1_9CHLO)

HSP 1 Score: 126 bits (316), Expect = 4.090e-34
Identity = 60/85 (70.59%), Postives = 71/85 (83.53%), Query Frame = 1
Query:    1 GLDAGVPPPKVVADWTVKVMKRTIPAAVPGIHFLSGGMSEEEATLNLQALQDAYPTAPWSLTFSYGRALQSSTMKSWDGKEASIA 255
            GLDA    P  VA +TV+ M R+IP AVPGIHFLSGGMSEEE+TLNLQALQ+AYP APWSLTFSYGRALQS+T+K+W G + ++A
Sbjct:  170 GLDAPTASPAEVAKYTVRTMARSIPPAVPGIHFLSGGMSEEESTLNLQALQEAYPNAPWSLTFSYGRALQSTTLKTWAGNKDNVA 254          
BLAST of mRNA_P-wetherbeei_contig1579.1.1 vs. uniprot
Match: A0A7S3R9V9_DUNTE (Fructose-bisphosphate aldolase n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3R9V9_DUNTE)

HSP 1 Score: 127 bits (319), Expect = 3.600e-33
Identity = 60/85 (70.59%), Postives = 72/85 (84.71%), Query Frame = 1
Query:    1 GLDAGVPPPKVVADWTVKVMKRTIPAAVPGIHFLSGGMSEEEATLNLQALQDAYPTAPWSLTFSYGRALQSSTMKSWDGKEASIA 255
            GLDA V  PK VA +TV+ MKR+IP AVPGIHFLSGGMSEEE+TLNLQALQ+  P +PW+LTFSYGRALQS+T+K+W GK  ++A
Sbjct:  294 GLDAPVATPKEVAQYTVRTMKRSIPPAVPGIHFLSGGMSEEESTLNLQALQEEMPQSPWALTFSYGRALQSTTLKTWSGKPENVA 378          
BLAST of mRNA_P-wetherbeei_contig1579.1.1 vs. uniprot
Match: A0A2J8A6V3_9CHLO (Bis(5'-adenosyl)-triphosphatase n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A6V3_9CHLO)

HSP 1 Score: 124 bits (311), Expect = 1.790e-32
Identity = 61/83 (73.49%), Postives = 70/83 (84.34%), Query Frame = 1
Query:    1 GLDAGVPPPKVVADWTVKVMKRTIPAAVPGIHFLSGGMSEEEATLNLQALQDAYPTAPWSLTFSYGRALQSSTMKSWDGKEAS 249
            GLDA V  P+ VA  TV+ M R+IPAAVPGIHFLSGGM+EEEATLNLQAL D  P +PW+LTFSYGRALQSST+K+W GKEA+
Sbjct:   91 GLDAPVATPQEVARVTVRTMMRSIPAAVPGIHFLSGGMAEEEATLNLQALNDEMPNSPWALTFSYGRALQSSTLKTWAGKEAN 173          
BLAST of mRNA_P-wetherbeei_contig1579.1.1 vs. uniprot
Match: A0A8J9WTL5_9CHLO (Fructose-bisphosphate aldolase, cytoplasmic isozyme n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WTL5_9CHLO)

HSP 1 Score: 125 bits (314), Expect = 2.170e-32
Identity = 60/80 (75.00%), Postives = 67/80 (83.75%), Query Frame = 1
Query:    1 GLDAGVPPPKVVADWTVKVMKRTIPAAVPGIHFLSGGMSEEEATLNLQALQDAYPTAPWSLTFSYGRALQSSTMKSWDGK 240
            GLD   PPP  VA +TV+ M R IPAAVPGIHFLSGGMSEEE+TLNLQALQD  P APWSLTFSYGRALQS+T+K+W G+
Sbjct:  302 GLDVPTPPPAEVAKYTVRTMLRAIPAAVPGIHFLSGGMSEEESTLNLQALQDECPNAPWSLTFSYGRALQSTTLKTWAGQ 381          
BLAST of mRNA_P-wetherbeei_contig1579.1.1 vs. uniprot
Match: A8JCY4_CHLRE (Fructose-bisphosphate aldolase n=4 Tax=Chlamydomonadales TaxID=3042 RepID=A8JCY4_CHLRE)

HSP 1 Score: 124 bits (311), Expect = 3.320e-32
Identity = 60/85 (70.59%), Postives = 72/85 (84.71%), Query Frame = 1
Query:    1 GLDAGVPPPKVVADWTVKVMKRTIPAAVPGIHFLSGGMSEEEATLNLQALQDAYPTAPWSLTFSYGRALQSSTMKSWDGKEASIA 255
            GLDA V  P++VA+ T + M R+IP AVPGIHFLSGGMSEEE+TLNLQAL +A P APW+LTFSYGRALQSST+K+W GKE++ A
Sbjct:  263 GLDAPVASPQLVAEVTTRTMMRSIPPAVPGIHFLSGGMSEEESTLNLQALNEACPNAPWALTFSYGRALQSSTLKTWAGKESNWA 347          
BLAST of mRNA_P-wetherbeei_contig1579.1.1 vs. uniprot
Match: A0A835Y5J0_9CHLO (Fructose-bisphosphate aldolase n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y5J0_9CHLO)

HSP 1 Score: 124 bits (310), Expect = 4.580e-32
Identity = 60/82 (73.17%), Postives = 70/82 (85.37%), Query Frame = 1
Query:    1 GLDAGVPPPKVVADWTVKVMKRTIPAAVPGIHFLSGGMSEEEATLNLQALQDAYPTAPWSLTFSYGRALQSSTMKSWDGKEA 246
            GLDA V  PK+VA+ T + M R+IP AVPGIHFLSGGMSEEE+TLNLQAL +A P APW+LTFSYGRALQSST+K+W GKE+
Sbjct:  262 GLDAPVASPKLVAEVTTRTMLRSIPPAVPGIHFLSGGMSEEESTLNLQALNEACPQAPWALTFSYGRALQSSTLKTWAGKES 343          
BLAST of mRNA_P-wetherbeei_contig1579.1.1 vs. uniprot
Match: A0A5J4XTG6_9CHLO (Fructose-bisphosphate aldolase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XTG6_9CHLO)

HSP 1 Score: 124 bits (310), Expect = 8.560e-32
Identity = 60/79 (75.95%), Postives = 66/79 (83.54%), Query Frame = 1
Query:    1 GLDAGVPPPKVVADWTVKVMKRTIPAAVPGIHFLSGGMSEEEATLNLQALQDAYPTAPWSLTFSYGRALQSSTMKSWDG 237
            GLDA    PK VA WT + M R +PAAVPGIHFLSGGMSEEEATLNLQALQ+A P APWSLTFSYGRALQS+T+K+W G
Sbjct:  305 GLDAPSASPKEVAHWTTQTMLRGVPAAVPGIHFLSGGMSEEEATLNLQALQEACPNAPWSLTFSYGRALQSATLKAWAG 383          
BLAST of mRNA_P-wetherbeei_contig1579.1.1 vs. uniprot
Match: A0A2P6TYN3_CHLSO (Fructose-bisphosphate aldolase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TYN3_CHLSO)

HSP 1 Score: 122 bits (307), Expect = 1.290e-31
Identity = 60/81 (74.07%), Postives = 68/81 (83.95%), Query Frame = 1
Query:    1 GLDAGVPPPKVVADWTVKVMKRTIPAAVPGIHFLSGGMSEEEATLNLQALQDAYPTAPWSLTFSYGRALQSSTMKSWDGKE 243
            GLDA    P  VA +T + M RTIPA+VPGIHFLSGGMSEEE+TLNLQALQ+A P APWSLTFSYGRALQ+ST+K+W GKE
Sbjct:  264 GLDAPPASPADVAKYTTRTMLRTIPASVPGIHFLSGGMSEEESTLNLQALQEACPNAPWSLTFSYGRALQASTLKTWAGKE 344          
BLAST of mRNA_P-wetherbeei_contig1579.1.1 vs. uniprot
Match: A0A2V0NVL5_9CHLO (Fructose-bisphosphate aldolase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NVL5_9CHLO)

HSP 1 Score: 121 bits (303), Expect = 4.740e-31
Identity = 59/81 (72.84%), Postives = 68/81 (83.95%), Query Frame = 1
Query:    1 GLDAGVPPPKVVADWTVKVMKRTIPAAVPGIHFLSGGMSEEEATLNLQALQDAYPTAPWSLTFSYGRALQSSTMKSWDGKE 243
            GLDA    P  VA +TV+ M R+IP AVPGIHFLSGGMSEEE+TLNLQALQ+A P +PWSLTFSYGRALQSST+K+W GK+
Sbjct:  261 GLDAPTASPADVAKYTVRTMLRSIPPAVPGIHFLSGGMSEEESTLNLQALQEACPNSPWSLTFSYGRALQSSTLKTWAGKK 341          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1579.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CDL1_9STRA8.020e-3776.47Fructose-bisphosphate aldolase n=1 Tax=Tribonema m... [more]
A0A0D2LML1_9CHLO4.090e-3470.59Fructose-bisphosphate aldolase n=1 Tax=Monoraphidi... [more]
A0A7S3R9V9_DUNTE3.600e-3370.59Fructose-bisphosphate aldolase n=1 Tax=Dunaliella ... [more]
A0A2J8A6V3_9CHLO1.790e-3273.49Bis(5'-adenosyl)-triphosphatase n=1 Tax=Tetrabaena... [more]
A0A8J9WTL5_9CHLO2.170e-3275.00Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
A8JCY4_CHLRE3.320e-3270.59Fructose-bisphosphate aldolase n=4 Tax=Chlamydomon... [more]
A0A835Y5J0_9CHLO4.580e-3273.17Fructose-bisphosphate aldolase n=1 Tax=Edaphochlam... [more]
A0A5J4XTG6_9CHLO8.560e-3275.95Fructose-bisphosphate aldolase n=1 Tax=Trebouxia s... [more]
A0A2P6TYN3_CHLSO1.290e-3174.07Fructose-bisphosphate aldolase n=1 Tax=Chlorella s... [more]
A0A2V0NVL5_9CHLO4.740e-3172.84Fructose-bisphosphate aldolase n=1 Tax=Raphidoceli... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1579contigP-wetherbeei_contig1579:3..522 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog3055.EDO98285
PFAMsGlycolytic
Model size261
Max annot lvl3041|Chlorophyta
KEGG rclassRC00438,RC00439,RC00603,RC00604
KEGG koko:K01623
KEGG ReactionR01068,R01070,R01829,R02568
KEGG Pathwayko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230
KEGG ModuleM00001,M00003,M00165,M00167
Hectar predicted targeting categoryother localisation
Exons2
Evalue5.45e-33
EggNOG OGsCOG3588@1|root,KOG1557@2759|Eukaryota,37KBJ@33090|Viridiplantae,34KB7@3041|Chlorophyta
EC4.1.2.13
DescriptionBelongs to the class I fructose-bisphosphate aldolase family
Cds size261
COG categoryG
BRITEko00000,ko00001,ko00002,ko01000,ko03036,ko04131,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186067.5121305-CDS-P-wetherbeei_contig1579:2..561683186067.5121305-CDS-P-wetherbeei_contig1579:2..56Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1579 3..56 +
1683186067.5230818-CDS-P-wetherbeei_contig1579:315..5221683186067.5230818-CDS-P-wetherbeei_contig1579:315..522Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1579 316..522 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1579.1.1prot_P-wetherbeei_contig1579.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1579 3..522 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1579.1.1

>prot_P-wetherbeei_contig1579.1.1 ID=prot_P-wetherbeei_contig1579.1.1|Name=mRNA_P-wetherbeei_contig1579.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=87bp
GLDAGVPPPKVVADWTVKVMKRTIPAAVPGIHFLSGGMSEEEATLNLQAL
QDAYPTAPWSLTFSYGRALQSSTMKSWDGKEASIAI*
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mRNA from alignment at P-wetherbeei_contig1579:3..522+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1579.1.1 ID=mRNA_P-wetherbeei_contig1579.1.1|Name=mRNA_P-wetherbeei_contig1579.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=520bp|location=Sequence derived from alignment at P-wetherbeei_contig1579:3..522+ (Phaeothamnion wetherbeei SAG_119_79)
GGGCTCGACGCTGGCGTGCCGCCGCCCAAGGTCGTCGCTGACTGGACTGT CAAGGTGAAAACCAACCAATCTCTTCATATTTCGCCGCTTCGCCGCCTTT TTTGTTGGATCCACTCGCTTGTAGGATTGATGGTGTGCCTGCTTGCTTGC ATCTTGGCCTTCTTTGGTTCTGCGCTGTCGTGGTTTAACTCCTTTTGGCA GTCCTTTCCGAAACGGCTTGCCCGTACACCTCACGTTCCTTTTTGCACCA CCACTGCGGTTGCATCTTCCTTCCCTCGGCTTCTTCTTCCGTGTCGTCCG CCCTCGGCCGCAGGTGATGAAGCGGACGATCCCGGCGGCAGTGCCAGGCA TCCACTTCCTCTCGGGGGGCATGTCGGAGGAGGAGGCGACGCTCAACCTG CAGGCGCTCCAGGACGCCTACCCGACGGCGCCGTGGTCGCTCACCTTCTC GTACGGCCGCGCGCTGCAGAGCAGCACCATGAAGTCATGGGACGGCAAGG AGGCGAGTATCGCTATATAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1579:3..522+

>mRNA_P-wetherbeei_contig1579.1.1 ID=mRNA_P-wetherbeei_contig1579.1.1|Name=mRNA_P-wetherbeei_contig1579.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=261bp|location=Sequence derived from alignment at P-wetherbeei_contig1579:3..522+ (Phaeothamnion wetherbeei SAG_119_79)
GGGCTCGACGCTGGCGTGCCGCCGCCCAAGGTCGTCGCTGACTGGACTGT
CAAGGTGATGAAGCGGACGATCCCGGCGGCAGTGCCAGGCATCCACTTCC
TCTCGGGGGGCATGTCGGAGGAGGAGGCGACGCTCAACCTGCAGGCGCTC
CAGGACGCCTACCCGACGGCGCCGTGGTCGCTCACCTTCTCGTACGGCCG
CGCGCTGCAGAGCAGCACCATGAAGTCATGGGACGGCAAGGAGGCGAGTA
TCGCTATATAA
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