mRNA_P-wetherbeei_contig15786.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15786.1.1
Unique NamemRNA_P-wetherbeei_contig15786.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig15786.1.1 vs. uniprot
Match: A0A6H5KK44_9PHAE (DNA-directed RNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK44_9PHAE)

HSP 1 Score: 281 bits (718), Expect = 1.740e-93
Identity = 152/196 (77.55%), Postives = 163/196 (83.16%), Query Frame = 1 
Query:    1 QALKAALPNVIVAGIPSVARAVINVQEGPSVVPGDG---ERYHLLVEGCGLRDVMGAPGIDGTRTKSNHIIEVEKTLGVEAARIMITEEISYIMKAYGITIDRRHLLLLSDVMTFKGEVLGITRFGVGKMRESVLMLASFEKTTDHLFDAAVHARTDRIVGVSECIIMGVPIPLGTGLFKLLSAAERPLVPAKPAL 579
            QALKA LP VIV GIPSV RAVINVQE  S         ERYHLLVEG GL  VMGAPGIDG+RT+SNHIIEV  TLGVEAARI+I+EEI+YIMKAYGI+IDRRHLLLL+DVMTFKGEVLGITRFGV KMRESVLMLASFEKTTDHLFDA+VH R D IVGVSECIIMG+PIPLGTGLFKLL   ++   P  P L
Sbjct:   26 QALKAVLPGVIVQGIPSVNRAVINVQENSSGAASGAAPKERYHLLVEGYGLAAVMGAPGIDGSRTRSNHIIEVFHTLGVEAARIIISEEITYIMKAYGISIDRRHLLLLADVMTFKGEVLGITRFGVSKMRESVLMLASFEKTTDHLFDASVHGRHDAIVGVSECIIMGIPIPLGTGLFKLLMNEDKIKPPPTPEL 221
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BLAST of mRNA_P-wetherbeei_contig15786.1.1 vs. uniprot
Match: A0A397CZY2_9STRA (DNA-directed RNA polymerase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CZY2_9STRA)

HSP 1 Score: 268 bits (685), Expect = 5.310e-86
Identity = 136/185 (73.51%), Postives = 156/185 (84.32%), Query Frame = 1 
Query:    1 QALKAALPNVIVAGIPSVARAVINVQEGPSVVPGDGERYHLLVEGCGLRDVMGAPGIDGTRTKSNHIIEVEKTLGVEAARIMITEEISYIMKAYGITIDRRHLLLLSDVMTFKGEVLGITRFGVGKMRESVLMLASFEKTTDHLFDAAVHARTDRIVGVSECIIMGVPIPLGTGLFKLLSAAERP 555
            Q+LKAALP+VIV GIP+V RAVIN +EG        ++ HLLVEG GL DVMG PG+DG  T SNHIIEVEKTLG+EAAR +I  E+SYIM AYGI IDRRHL+LLSD+MTFKGEVLGITRFG+ KM+ESVLMLASFEKTTDHLFDAAVH+RTD IVGVSECIIMG+PI +GTG+FKLL   ++P
Sbjct:  212 QSLKAALPSVIVQGIPTVNRAVINYEEGKD------KKLHLLVEGYGLSDVMGIPGVDGLHTTSNHIIEVEKTLGIEAARFLIASEVSYIMSAYGIGIDRRHLMLLSDIMTFKGEVLGITRFGIAKMKESVLMLASFEKTTDHLFDAAVHSRTDAIVGVSECIIMGIPIAVGTGIFKLLRQVDQP 390
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BLAST of mRNA_P-wetherbeei_contig15786.1.1 vs. uniprot
Match: A0A662XJT2_9STRA (DNA-directed RNA polymerase (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XJT2_9STRA)

HSP 1 Score: 265 bits (678), Expect = 1.050e-85
Identity = 134/187 (71.66%), Postives = 157/187 (83.96%), Query Frame = 1 
Query:    1 QALKAALPNVIVAGIPSVARAVINVQEGPSVVPGDGERYHLLVEGCGLRDVMGAPGIDGTRTKSNHIIEVEKTLGVEAARIMITEEISYIMKAYGITIDRRHLLLLSDVMTFKGEVLGITRFGVGKMRESVLMLASFEKTTDHLFDAAVHARTDRIVGVSECIIMGVPIPLGTGLFKLLSAAERPLV 561
            QALKA LP+VIV GIP+V RAVIN +E     P   + +HLLVEG GL +VMG PG+DG  T SNHIIEVEKTLG+EAAR +I+ E++YIM AYGI IDRRH +LLSD+MTFKGEVLGITRFG+ KM+ESVLMLASFEKTTDHLFDAAVH+RTD IVGVSECIIMG+PIP+GTG+FKLL   ++P +
Sbjct:  150 QALKAQLPSVIVQGIPTVNRAVINYEEQQD--PSAAKAHHLLVEGYGLAEVMGIPGVDGLHTTSNHIIEVEKTLGIEAARELISSEVNYIMSAYGIGIDRRHQMLLSDIMTFKGEVLGITRFGIAKMKESVLMLASFEKTTDHLFDAAVHSRTDAIVGVSECIIMGIPIPIGTGIFKLLRQVDKPRI 334
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BLAST of mRNA_P-wetherbeei_contig15786.1.1 vs. uniprot
Match: D7FU80_ECTSI (DNA-directed RNA polymerase subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU80_ECTSI)

HSP 1 Score: 282 bits (722), Expect = 1.420e-84
Identity = 153/196 (78.06%), Postives = 163/196 (83.16%), Query Frame = 1 
Query:    1 QALKAALPNVIVAGIPSVARAVINVQEGPSVVPGDG---ERYHLLVEGCGLRDVMGAPGIDGTRTKSNHIIEVEKTLGVEAARIMITEEISYIMKAYGITIDRRHLLLLSDVMTFKGEVLGITRFGVGKMRESVLMLASFEKTTDHLFDAAVHARTDRIVGVSECIIMGVPIPLGTGLFKLLSAAERPLVPAKPAL 579
            QALKA LP VIV GIPSV RAVINVQE  S         ERYHLLVEG GL  VMGAPGIDGTRT+SNHIIEV  TLGVEAARI+I+EEI+YIMKAYGI+IDRRHLLLL+DVMTFKGEVLGITRFGV KMRESVLMLASFEKTTDHLFDA+VH R D IVGVSECIIMG+PIPLGTGLFKLL   ++   P  P L
Sbjct: 1320 QALKAVLPGVIVQGIPSVNRAVINVQENSSGAASGAAPKERYHLLVEGYGLAAVMGAPGIDGTRTRSNHIIEVFHTLGVEAARIIISEEITYIMKAYGISIDRRHLLLLADVMTFKGEVLGITRFGVSKMRESVLMLASFEKTTDHLFDASVHGRHDAIVGVSECIIMGIPIPLGTGLFKLLMNEDKIKPPPTPEL 1515
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BLAST of mRNA_P-wetherbeei_contig15786.1.1 vs. uniprot
Match: A0A7S1D4Y3_CYCTE (DNA-directed RNA polymerase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D4Y3_CYCTE)

HSP 1 Score: 264 bits (675), Expect = 1.670e-84
Identity = 140/186 (75.27%), Postives = 152/186 (81.72%), Query Frame = 1 
Query:    1 QALKAALPNVIVAGIPSVARAVINVQEGPSVVPGDGERYHLLVEGCGLRDVMGAPGIDGTRTKSNHIIEVEKTLGVEAARIMITEEISYIMKAYGITIDRRHLLLLSDVMTFKGEVLGITRFGVGKMRESVLMLASFEKTTDHLFDAAVHARTDRIVGVSECIIMGVPIPLGTGLFKLLSAAERPL 558
            QALK  LP VIV GIPSV RAVIN ++      G    YHLLVEG GL +VMG+PG+DG+ T +NHIIEVE TLGVEAAR  I+ EISYIM AYGI ID RHLLLLSDVMTFKGEVLGITRFGV KM+ESVLMLASFEKTTDHLFDAAVH RTD IVGVSECIIMG+PIPLG+GLFKLL  A  P+
Sbjct:  205 QALKVTLPQVIVQGIPSVNRAVINEED-----KGGRTSYHLLVEGYGLAEVMGSPGVDGSHTTTNHIIEVEDTLGVEAARTQISSEISYIMNAYGIGIDSRHLLLLSDVMTFKGEVLGITRFGVSKMKESVLMLASFEKTTDHLFDAAVHGRTDAIVGVSECIIMGIPIPLGSGLFKLLKKATAPV 385
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BLAST of mRNA_P-wetherbeei_contig15786.1.1 vs. uniprot
Match: A0A7S2FDK6_9STRA (DNA-directed RNA polymerase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FDK6_9STRA)

HSP 1 Score: 260 bits (665), Expect = 3.080e-84
Identity = 138/184 (75.00%), Postives = 153/184 (83.15%), Query Frame = 1 
Query:    1 QALKAALPNVIVAGIPSVARAVINVQEGPSVVPGDGERYHLLVEGCGLRDVMGAPGIDGTRTKSNHIIEVEKTLGVEAARIMITEEISYIMKAYGITIDRRHLLLLSDVMTFKGEVLGITRFGVGKMRESVLMLASFEKTTDHLFDAAVHARTDRIVGVSECIIMGVPIPLGTGLFKLLSAAER 552
            QALKAALP VIV G P+V+RAVIN ++  +    D  +Y+LLVEG GL DVMGAPGIDG  T SNH++EV   LG+EAAR  I++EISYIM AYGI ID RHL+LLSDVMTFKGEVLGITRFGV KMRESVLMLASFEKTTDHLFDAAVH+R D IVGVSECIIMGVPIPLGTGLFKLL   +R
Sbjct:  103 QALKAALPGVIVQGTPTVSRAVINSEDDETT---DKTKYNLLVEGYGLADVMGAPGIDGLNTVSNHVLEVNVILGIEAARTKISDEISYIMAAYGIHIDLRHLMLLSDVMTFKGEVLGITRFGVSKMRESVLMLASFEKTTDHLFDAAVHSRRDDIVGVSECIIMGVPIPLGTGLFKLLRDVDR 283
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BLAST of mRNA_P-wetherbeei_contig15786.1.1 vs. uniprot
Match: A0A425DG46_9STRA (DNA-directed RNA polymerase n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425DG46_9STRA)

HSP 1 Score: 268 bits (685), Expect = 7.120e-84
Identity = 136/185 (73.51%), Postives = 156/185 (84.32%), Query Frame = 1 
Query:    1 QALKAALPNVIVAGIPSVARAVINVQEGPSVVPGDGERYHLLVEGCGLRDVMGAPGIDGTRTKSNHIIEVEKTLGVEAARIMITEEISYIMKAYGITIDRRHLLLLSDVMTFKGEVLGITRFGVGKMRESVLMLASFEKTTDHLFDAAVHARTDRIVGVSECIIMGVPIPLGTGLFKLLSAAERP 555
            Q+LKAALP+VIV GIP+V RAVIN +EG        ++ HLLVEG GL DVMG PG+DG  T SNHIIEVEKTLG+EAAR +I  E+SYIM AYGI IDRRHL+LLSD+MTFKGEVLGITRFG+ KM+ESVLMLASFEKTTDHLFDAAVH+RTD IVGVSECIIMG+PI +GTG+FKLL   ++P
Sbjct:  395 QSLKAALPSVIVQGIPTVNRAVINYEEGKD------KKLHLLVEGYGLSDVMGIPGVDGLHTTSNHIIEVEKTLGIEAARFLIASEVSYIMSAYGIGIDRRHLMLLSDIMTFKGEVLGITRFGIAKMKESVLMLASFEKTTDHLFDAAVHSRTDAIVGVSECIIMGIPIAVGTGIFKLLRQVDQP 573
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BLAST of mRNA_P-wetherbeei_contig15786.1.1 vs. uniprot
Match: A0A6T7J7L8_9STRA (DNA-directed RNA polymerase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7J7L8_9STRA)

HSP 1 Score: 261 bits (666), Expect = 2.450e-83
Identity = 144/196 (73.47%), Postives = 155/196 (79.08%), Query Frame = 1 
Query:    1 QALKAALPNVIVAGIPSVARAVINVQEGPSVVPGDGER-YHLLVEGCGLRDVMGAPGIDGTRTKSNHIIEVEKTLGVEAARIMITEEISYIMKAYGITIDRRHLLLLSDVMTFKGEVLGITRFGVGKMRESVLMLASFEKTTDHLFDAAVHARTDRIVGVSECIIMGVPIPLGTGLFKLLSAAERPLVPAKPALTL 585
            QALK ALP VIV GI +V RAVIN ++       DG   YHLLVEGCGL  VMG+ G+DG  T +NHIIEVE+TLGVEAARI I+ EISYIM AYGI ID RHLLLLSDVMTFKGEVLGITRFGV KMRESVLMLASFEKTTDHLFDAAVH R+D IVGVSECIIMG+PIPLGTGLFKLL  A  P+    P   L
Sbjct:  185 QALKVALPLVIVQGIATVNRAVINEEDK------DGRASYHLLVEGCGLSAVMGSNGVDGHHTTTNHIIEVEQTLGVEAARIKISSEISYIMGAYGIGIDSRHLLLLSDVMTFKGEVLGITRFGVSKMRESVLMLASFEKTTDHLFDAAVHGRSDAIVGVSECIIMGIPIPLGTGLFKLLKRATAPVKRTAPKSAL 374
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BLAST of mRNA_P-wetherbeei_contig15786.1.1 vs. uniprot
Match: A0A836CEF0_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEF0_9STRA)

HSP 1 Score: 276 bits (706), Expect = 1.990e-82
Identity = 148/192 (77.08%), Postives = 162/192 (84.38%), Query Frame = 1 
Query:    1 QALKAALPNVIVAGIPSVARAVINVQEGPSVVPGDGERYHLLVEGCGLRDVMGAPGIDGTRTKSNHIIEVEKTLGVEAARIMITEEISYIMKAYGITIDRRHLLLLSDVMTFKGEVLGITRFGVGKMRESVLMLASFEKTTDHLFDAAVHARTDRIVGVSECIIMGVPIPLGTGLFKLLSAAERPLVPAKPA 576
            +ALK  LP+VIV GIPS++RAVI  +E  S     GE+YHLLVEG GL  VMGA GI+GTRTKSNHIIE+EKTLG+EAAR  ITEEISYIM AYGI++DRRHLLLLSDVM+FKGEVLGITRFGV KMRESVLMLASFEKTTDHLFDAAVHAR D IVGVSECIIMG+PIPLGTGLFKLL A   P    KP+
Sbjct: 1220 KALKKVLPSVIVQGIPSISRAVICCEEDRSA----GEKYHLLVEGYGLAAVMGAAGIEGTRTKSNHIIEMEKTLGIEAARRTITEEISYIMSAYGISVDRRHLLLLSDVMSFKGEVLGITRFGVSKMRESVLMLASFEKTTDHLFDAAVHARRDAIVGVSECIIMGIPIPLGTGLFKLLRADPDPPELPKPS 1407
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BLAST of mRNA_P-wetherbeei_contig15786.1.1 vs. uniprot
Match: A0A3R7DSM0_9STRA (DNA-directed RNA polymerase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7DSM0_9STRA)

HSP 1 Score: 268 bits (685), Expect = 2.360e-82
Identity = 136/185 (73.51%), Postives = 156/185 (84.32%), Query Frame = 1 
Query:    1 QALKAALPNVIVAGIPSVARAVINVQEGPSVVPGDGERYHLLVEGCGLRDVMGAPGIDGTRTKSNHIIEVEKTLGVEAARIMITEEISYIMKAYGITIDRRHLLLLSDVMTFKGEVLGITRFGVGKMRESVLMLASFEKTTDHLFDAAVHARTDRIVGVSECIIMGVPIPLGTGLFKLLSAAERP 555
            Q+LKAALP+VIV GIP+V RAVIN +EG        ++ HLLVEG GL DVMG PG+DG  T SNHIIEVEKTLG+EAAR +I  E+SYIM AYGI IDRRHL+LLSD+MTFKGEVLGITRFG+ KM+ESVLMLASFEKTTDHLFDAAVH+RTD IVGVSECIIMG+PI +GTG+FKLL   ++P
Sbjct:  558 QSLKAALPSVIVQGIPTVNRAVINYEEGKD------KKLHLLVEGYGLSDVMGIPGVDGLHTTSNHIIEVEKTLGIEAARFLIASEVSYIMSAYGIGIDRRHLMLLSDIMTFKGEVLGITRFGIAKMKESVLMLASFEKTTDHLFDAAVHSRTDAIVGVSECIIMGIPIAVGTGIFKLLRQVDQP 736
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15786.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KK44_9PHAE1.740e-9377.55DNA-directed RNA polymerase n=1 Tax=Ectocarpus sp.... [more]
A0A397CZY2_9STRA5.310e-8673.51DNA-directed RNA polymerase n=1 Tax=Aphanomyces as... [more]
A0A662XJT2_9STRA1.050e-8571.66DNA-directed RNA polymerase (Fragment) n=1 Tax=Not... [more]
D7FU80_ECTSI1.420e-8478.06DNA-directed RNA polymerase subunit n=1 Tax=Ectoca... [more]
A0A7S1D4Y3_CYCTE1.670e-8475.27DNA-directed RNA polymerase n=1 Tax=Cyclophora ten... [more]
A0A7S2FDK6_9STRA3.080e-8475.00DNA-directed RNA polymerase n=1 Tax=Florenciella p... [more]
A0A425DG46_9STRA7.120e-8473.51DNA-directed RNA polymerase n=3 Tax=Aphanomyces as... [more]
A0A6T7J7L8_9STRA2.450e-8373.47DNA-directed RNA polymerase n=1 Tax=Attheya septen... [more]
A0A836CEF0_9STRA1.990e-8277.08DNA-directed RNA polymerase subunit n=1 Tax=Tribon... [more]
A0A3R7DSM0_9STRA2.360e-8273.51DNA-directed RNA polymerase n=1 Tax=Aphanomyces as... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15786contigP-wetherbeei_contig15786:118..1173 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FU80
Preferred namePOLR3A
PFAMsRNA_pol_Rpb1_1,RNA_pol_Rpb1_2,RNA_pol_Rpb1_3,RNA_pol_Rpb1_4,RNA_pol_Rpb1_5
Model size603
Max annot lvl2759|Eukaryota
KEGG rclassRC02795
KEGG koko:K03018,ko:K21594
KEGG ReactionR00435,R00441,R00442,R00443
KEGG Pathwayko00230,ko00240,ko01100,ko03020,ko04623,ko05169,map00230,map00240,map01100,map03020,map04623,map05169
KEGG ModuleM00181
Hectar predicted targeting categoryother localisation
GOsGO:0000428,GO:0000731,GO:0001817,GO:0001819,GO:0002376,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005665,GO:0005666,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006351,GO:0006366,GO:0006383,GO:0006399,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006955,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009304,GO:0009987,GO:0010467,GO:0010494,GO:0016070,GO:0016591,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019985,GO:0030880,GO:0031974,GO:0031981,GO:0032479,GO:0032481,GO:0032648,GO:0032728,GO:0032774,GO:0032991,GO:0033554,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0035770,GO:0036464,GO:0042797,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045087,GO:0046483,GO:0048518,GO:0050789,GO:0050896,GO:0051239,GO:0051240,GO:0051716,GO:0055029,GO:0061695,GO:0065007,GO:0070013,GO:0071704,GO:0071897,GO:0090304,GO:0097159,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990234,GO:1990904
Exons3
Evalue2.33e-85
EggNOG OGsCOG0086@1|root,KOG0261@2759|Eukaryota
EC2.7.7.6
DescriptionDNA-directed 5'-3' RNA polymerase activity
Cds size603
COG categoryK
BRITEbr01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03029
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186067.4255793-CDS-P-wetherbeei_contig15786:117..4441683186067.4255793-CDS-P-wetherbeei_contig15786:117..444Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15786 118..444 -
1683186067.4374251-CDS-P-wetherbeei_contig15786:699..7681683186067.4374251-CDS-P-wetherbeei_contig15786:699..768Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15786 700..768 -
1683186067.4478886-CDS-P-wetherbeei_contig15786:966..11731683186067.4478886-CDS-P-wetherbeei_contig15786:966..1173Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15786 967..1173 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15786.1.1prot_P-wetherbeei_contig15786.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15786 118..1173 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15786.1.1

>prot_P-wetherbeei_contig15786.1.1 ID=prot_P-wetherbeei_contig15786.1.1|Name=mRNA_P-wetherbeei_contig15786.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=201bp
QALKAALPNVIVAGIPSVARAVINVQEGPSVVPGDGERYHLLVEGCGLRD
VMGAPGIDGTRTKSNHIIEVEKTLGVEAARIMITEEISYIMKAYGITIDR
RHLLLLSDVMTFKGEVLGITRFGVGKMRESVLMLASFEKTTDHLFDAAVH
ARTDRIVGVSECIIMGVPIPLGTGLFKLLSAAERPLVPAKPALTLSERSV
*
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mRNA from alignment at P-wetherbeei_contig15786:118..1173-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15786.1.1 ID=mRNA_P-wetherbeei_contig15786.1.1|Name=mRNA_P-wetherbeei_contig15786.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1056bp|location=Sequence derived from alignment at P-wetherbeei_contig15786:118..1173- (Phaeothamnion wetherbeei SAG_119_79)
CAGGCGCTCAAGGCGGCGCTGCCGAACGTGATTGTGGCCGGCATCCCGAG
CGTGGCGCGCGCCGTCATCAACGTGCAGGAGGGGCCGAGCGTGGTGCCCG
GGGACGGGGAGCGCTACCACCTGCTGGTGGAGGGCTGTGGCCTGCGAGAC
GTCATGGGCGCCCCGGGCATCGACGGCACGCGCACCAAGTCCAACCACAT
CATCGAGGTGCGTTGTGAACACCTGCTGTCGGGAATCGGGAGAATGGGAG
CGGTGCTGCATGGCGGGGCTGGGGCCGTGAGTGGTGCTAGTAGCGCAAAA
GGAGACAGCGACAAACAAAAGGTTTCTCGTGATGCAAGGCTTTATCTGAT
TCCACTTTGCACCGGCCAATGCCTGCTGTTGCTCCGTTCGTTCCATTTGG
ACCAGGTGGAGAAGACCCTCGGCGTGGAGGCGGCGCGGATCATGATCACC
GAAGAGATCTCCTACATCATGAAGGTTCGTAGGCTGCTGGGGTCTAGCGG
TTTGACTGTTTTGGAGCAACATTCCTTTGTTGTCCACGTTGCCTATTTTC
TTGTCACTGAACAGCCTTGATGATGCAGCCGGCGGTGATAAAGAGAAGCC
CTGTACATTTGACCAGCCCTGGCCGAAGAAATGCTGTCCCATTTTCGTTC
CATCTTTATGATTTACGCCTTTTTTCGCCCGTTTCTTCTCTCGCCTCGGT
CGGTTGGATCGAACCCGAGCAAAGAACAGGCGTACGGCATCACGATCGAC
CGGCGGCACCTGCTGTTGCTGTCGGATGTCATGACCTTCAAGGGCGAGGT
CCTCGGCATCACGCGCTTCGGCGTCGGCAAGATGCGCGAGTCGGTGCTCA
TGCTGGCTTCCTTCGAGAAGACCACGGACCACCTCTTCGACGCCGCCGTG
CACGCCCGAACCGACCGCATCGTCGGCGTCTCTGAGTGTATTATCATGGG
GGTGCCCATCCCGCTCGGGACGGGACTCTTCAAGCTGCTCAGCGCGGCGG
AGCGGCCGCTGGTGCCGGCCAAGCCTGCGCTGACGCTGTCGGAGCGAAGC
GTCTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15786:118..1173-

>mRNA_P-wetherbeei_contig15786.1.1 ID=mRNA_P-wetherbeei_contig15786.1.1|Name=mRNA_P-wetherbeei_contig15786.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=603bp|location=Sequence derived from alignment at P-wetherbeei_contig15786:118..1173- (Phaeothamnion wetherbeei SAG_119_79)
CAGGCGCTCAAGGCGGCGCTGCCGAACGTGATTGTGGCCGGCATCCCGAG
CGTGGCGCGCGCCGTCATCAACGTGCAGGAGGGGCCGAGCGTGGTGCCCG
GGGACGGGGAGCGCTACCACCTGCTGGTGGAGGGCTGTGGCCTGCGAGAC
GTCATGGGCGCCCCGGGCATCGACGGCACGCGCACCAAGTCCAACCACAT
CATCGAGGTGGAGAAGACCCTCGGCGTGGAGGCGGCGCGGATCATGATCA
CCGAAGAGATCTCCTACATCATGAAGGCGTACGGCATCACGATCGACCGG
CGGCACCTGCTGTTGCTGTCGGATGTCATGACCTTCAAGGGCGAGGTCCT
CGGCATCACGCGCTTCGGCGTCGGCAAGATGCGCGAGTCGGTGCTCATGC
TGGCTTCCTTCGAGAAGACCACGGACCACCTCTTCGACGCCGCCGTGCAC
GCCCGAACCGACCGCATCGTCGGCGTCTCTGAGTGTATTATCATGGGGGT
GCCCATCCCGCTCGGGACGGGACTCTTCAAGCTGCTCAGCGCGGCGGAGC
GGCCGCTGGTGCCGGCCAAGCCTGCGCTGACGCTGTCGGAGCGAAGCGTC
TAA
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