mRNA_P-wetherbeei_contig1578.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1578.3.1 vs. uniprot
Match: A0A6H5KJB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJB0_9PHAE) HSP 1 Score: 235 bits (599), Expect = 2.280e-67 Identity = 108/195 (55.38%), Postives = 145/195 (74.36%), Query Frame = 3
Query: 489 LLPLVATRDQWTQYWGRTEVQRAGKIFEAAVVTFLGLWACYFTSFFMGAGLTSILGAGFAFYWLLGPSLSAYRKNRTLRGRLAPGRDSAGGVAGLFSARVTSVQEEYNPVTRRALRLLLLVEDEDGRALQFRVSMAPEYRRIRQGMRVEVLLLATDPSFTRVVGVSDAFIPAADVWVGEYPYLERLQFRRLLASR 1073
+LP++ATRDQW+ YWG ++VQR GK+FE A V FLGLWACYF SFF+G +++G F FYWLL P+++++R+NR LRG +AP + G +FSARV S EEY+PVT + + L +++EDEDGRAL+FR EY R+R GM E +L++ D F ++GVSD FIPAA+VWVGEYPYL+++ RRLLASR
Sbjct: 2 VLPVLATRDQWSHYWGGSDVQRVGKLFEVAAVAFLGLWACYFASFFLGVATMTVIGTSFLFYWLLAPNVTSFRRNRALRGSIAPFPGARGNSVAIFSARVVSAVEEYHPVTGQPVFLRMVIEDEDGRALKFRTRTRAEYARVRPGMAAEAVLVSPDERFEEILGVSDTFIPAANVWVGEYPYLDKVVMRRLLASR 196
BLAST of mRNA_P-wetherbeei_contig1578.3.1 vs. uniprot
Match: D8LTW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTW7_ECTSI) HSP 1 Score: 203 bits (517), Expect = 9.800e-56 Identity = 95/175 (54.29%), Postives = 127/175 (72.57%), Query Frame = 3
Query: 549 QRAGKIFEAAVVTFLGLWACYFTSFFMGAGLTSILGAGFAFYWLLGPSLSAYRKNRTLRGRLAPGRDSAGGVAGLFSARVTSVQEEYNPVTRRALRLLLLVEDEDGRALQFRVSMAPEYRRIRQGMRVEVLLLATDPSFTRVVGVSDAFIPAADVWVGEYPYLERLQFRRLLASR 1073
QR GK+FE A V FLGLWACYF SFF+G +++G F FYWLL P+++++R+NR L+G +AP + G +FSARV S EEY+PVT + + L +++EDEDGRAL+FR EY R+R GM E +L++ D F ++GVSD FIPAA+VWVGEYPYL+++ RRLLASR
Sbjct: 26 QRVGKLFEVAAVAFLGLWACYFASFFLGVATMTVIGTSFLFYWLLAPNVTSFRRNRALKGSIAPFPGARGNSVAIFSARVASAVEEYHPVTGQPVFLRMVIEDEDGRALKFRTRTRAEYARVRPGMAAEAILVSPDERFEEILGVSDTFIPAANVWVGEYPYLDKVVMRRLLASR 200
BLAST of mRNA_P-wetherbeei_contig1578.3.1 vs. uniprot
Match: A0A835YT15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT15_9STRA) HSP 1 Score: 201 bits (512), Expect = 9.900e-53 Identity = 103/191 (53.93%), Postives = 129/191 (67.54%), Query Frame = 3
Query: 519 WTQYWGRTEVQRAGKIFEAAVVTFLGLWACYFTSFFMGAGLTSILGAGFAFYWLLGPSLSAYRKNRTLRGRLAPGRDSAGGVAGLFSARVTSVQEEYNPVTRRALRLLLLVEDEDGRALQFRVSMAPEYRRIRQGMRVEVLLLATDPS--FTRVVGVSDAFIPAADVWVGEYPYLERLQFRRLLASRYGAS 1085
W YWG VQRAGK+ E+ V FLG+WACYFTSFF+G +TS++G F FYWLLGP+L YRKN RG+LAP G A LFSA + +V EE NP+T +A L L V DE+GRAL RV E R+ GM +EVLL++ +P F ++GVSDA+IPA D+WVG+YP+L +L RRLL RY S
Sbjct: 8 WNNYWGEG-VQRAGKVAESFSVAFLGVWACYFTSFFLGVAITSVIGVVFVFYWLLGPNLLNYRKNWEFRGKLAPSPKEPGTRAALFSASIANVVEEVNPITGKAANLRLEVADEEGRALMLRVPAVREAARVEAGMGIEVLLISDEPGGGFEDILGVSDAYIPAIDLWVGDYPHLNKLALRRLLNERYRRS 197
BLAST of mRNA_P-wetherbeei_contig1578.3.1 vs. uniprot
Match: K8Z4E0_NANGC (Putative membrane protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z4E0_NANGC) HSP 1 Score: 178 bits (452), Expect = 4.960e-47 Identity = 100/232 (43.10%), Postives = 133/232 (57.33%), Query Frame = 3
Query: 402 LIARSAGHIRRREQ--LTCKLTPLSFETATRLLPLVATRDQWTQYWGRTEVQRAGKIFEAAVVTFLGLWACYFTSFFMGAGLTSILGAGFAFYWLLGPSLSAYRKNRTLRGRLAPGRDSAGGVAG-LFSARVTSV-----QEEYNPVTRRALRLLLLVEDEDGRALQFRVSMAPEYRRIRQGMRVEVLLLATDPSFTRVVGVSDAFIPAADVWVGEYPYLERLQFRRLLASR 1073
L+ R+ R R + +C LT L T RLLP T DQW YWG TE + GKI+EAA TF GLW +F +F +G ++LG F FYW+L P L+AYR+N + RG GV G LFS RV V EYN R L++ +EDE GR L+ + P Y+++R GMR E L+L+ P F ++GVSD F+P WVGEYPY++++ F+ LASR
Sbjct: 9 LVVRNIAQERHRSRGLASCSLTVLRDRTLRRLLPSQFTGDQWKYYWGITESDKFGKIYEAASATFFGLWTSWFLTFLIGLPAATVLGTVFLFYWILAPGLAAYRRNVSFRGTYFARTPRDDGVFGALFSGRVVRVGRIRQAREYN----RPEALVMSMEDESGRKLRVYAPILPSYKKVRPGMRCEGLVLSESPDFDELMGVSDVFVPDCGAWVGEYPYIDKVPFKAFLASR 236
BLAST of mRNA_P-wetherbeei_contig1578.3.1 vs. uniprot
Match: K8Z4B4_NANGC (Putative membrane protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z4B4_NANGC) HSP 1 Score: 177 bits (450), Expect = 2.810e-46 Identity = 103/242 (42.56%), Postives = 135/242 (55.79%), Query Frame = 3
Query: 366 IRAAPLCRTKTELIARSAGHIRRREQLTCKLTPLSFETATRLLPLVATRDQWTQYWGRTEVQRAGKIFEAAVVTFLGLWACYFTSFFMGAGLTSILGAGFAFYWLLGPSLSAYRKNRTLRGRLAPGRDSAGGVAG-LFSARVTSV-----QEEYNPVTRRALRLLLLVEDEDGRALQFRVSMAPEYRRIRQGMRVEVLLLATDPSFTRVVGVSDAFIPAADVWVGEYPYLERLQFRRLLASR 1073
I +AP R + RS G +C LT L T RLLP T DQW YWG TE + GKI+EAA TF GLW +F +F +G ++LG F FYW+L P L+AYR+N + RG GV G LFS RV V EYN R L++ +EDE GR L+ + P Y+++R GMR E L+L+ P F ++GVSD F+P WVGEYPY++++ F+ LASR
Sbjct: 58 ITSAPQVRNIAQERHRSRG------LASCSLTVLRDRTLRRLLPSQFTGDQWKYYWGITESDKFGKIYEAASATFFGLWTSWFLTFLIGLPAATVLGTVFLFYWILAPGLAAYRRNVSFRGTYFARTPRDDGVFGALFSGRVVRVGRIRQAREYN----RPEALVMSMEDESGRKLRVYAPILPSYKKVRPGMRCEGLVLSESPDFDELMGVSDVFVPDCGAWVGEYPYIDKVPFKAFLASR 289
BLAST of mRNA_P-wetherbeei_contig1578.3.1 vs. uniprot
Match: A0A6U4L5P1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4L5P1_9STRA) HSP 1 Score: 138 bits (347), Expect = 2.180e-32 Identity = 79/211 (37.44%), Postives = 114/211 (54.03%), Query Frame = 3
Query: 456 LTPLSFETATRLLPLVATRDQWTQYWGRTEVQRAGKIFEAAVVTFLGLWACYFTSFFMGAGLTSILGAGFAFYWLLGPSLSAYRKNRTLRGRLAPGRDSAGGV--------AGLFSARVTSVQEEYNPVTRRALRLLLLVEDEDGRALQFRVSMAPEYRRIRQGMRVEVLLLATDPSFTRVVGVSDAFIPAADVWVGEYPYL--ERLQFRR 1058
L P+ T RL ++DQW +WG E+ RA +IFE A+V+F GLW +F +F +G + +++G FAF+ L+ P +A R+N R L DS V LFS R+ + + + R L L +EDEDGR LQ R + + + +G L+++ DPSF+ + VSD FIPAA W GEYPY+ ERL +R
Sbjct: 91 LRPIDTPTLERLATQSVSKDQWLHFWGSNEMARASRIFEVALVSFFGLWTTWFLNFAIGPTVGTLIGTVFAFWGLIAPYFAAARRNADFREGLL---DSFSSVWRPKRPLKTALFSGRIVRCERVVSDLKGRRFMLKLELEDEDGRLLQVRAPLHDRHADVMEGQLGLALMISEDPSFSTIERVSDVFIPAAQTWAGEYPYVRWERLPMQR 298
BLAST of mRNA_P-wetherbeei_contig1578.3.1 vs. uniprot
Match: A0A7S3P7K6_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P7K6_9STRA) HSP 1 Score: 115 bits (287), Expect = 4.610e-24 Identity = 77/235 (32.77%), Postives = 116/235 (49.36%), Query Frame = 3
Query: 456 LTPLSFETATRLLPL-VATRDQWTQYWGRTEVQRAGKIFEAAVVTFLGLWACYFTSFFMGAGLTSILGAGFAFYWLLGPSLSAYRKN-RTLRGR--LAPGRDSAGGVAGLFSARV---------------------------TSVQEEYNPVTRRALRLLLLVEDEDGRALQFRVSMAPEYRRIRQGMRVEVLLLATDPSFTRVVGVSDAFIPAADVWVGEYPYLERLQFRRLLA 1067
L PL E +LL + T +Q+ YWGRT +R G+I E+++V+FLG++ YF SF MG + +ILG F F+ +L P A ++N L GR + P + AGL+ A T ++ T L + + D GR LQ M+ EY I+ M V +LL+T F ++ ++D F+P AD W+G+YPYL R++ + LLA
Sbjct: 94 LVPLPSEELEQLLSVGPPTGEQYATYWGRTPQERYGRILESSIVSFLGVFFSYFLSFVMGGFVATILGTLFFFWGILSPQFKAAQRNWEFLGGRQLVDPWKGGDPDGAGLYGALYLGFVDDVCVVEQSTDTREYDLADFEDYTMETDDLEQYTGEPYLLRVRLRDSKGRELQIHTRMSEEYLDIQTKMPVMAILLSTRRKFDKLAAITDLFVPEADCWIGDYPYLNRVEVQSLLA 328
BLAST of mRNA_P-wetherbeei_contig1578.3.1 vs. uniprot
Match: A0A7S2UD74_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UD74_9STRA) HSP 1 Score: 114 bits (286), Expect = 7.180e-24 Identity = 85/248 (34.27%), Postives = 121/248 (48.79%), Query Frame = 3
Query: 441 QLTCKLTPLSFETATRLLP--LVATRDQWTQYWGRTEVQRAGKIFEAAVVTFLGLWACYFTSFFMGAGLTSILGAGFAFYWLLGPSLSAYRKNRTLRGR---LAPGRDSAGGVA----GLFSA----RVTSVQEEYNPVTRRA-------------------------LRLLLLVEDEDGRALQFRVSMAPEYRRIRQGMRVEVLLLATDPSFTRVVGVSDAFIPAADVWVGEYPYLERLQFRRLLAS 1070
+L L P+ ET RLL + T Q+ YWGRT + +FE+A VT LGL+ YF SF +G + +++ FA + +L P L AY++N LRG + P D +A GL+ A V V NP+ +L L V D +GR LQ M+ EY I +GM V +LL+T F ++ G++D IP A+ WVG+YPYL+R F R+LA+
Sbjct: 82 ELNMALIPIPVETMGRLLSSGTLPTPAQYGAYWGRTSRETYAGLFESANVTVLGLFCAYFLSFILGQFVATLVSFVFAAWIILAPQLKAYQRNWELRGGRDLVDPWSDYDDDIAPDKRGLYGAYYFGHVVHVAVVENPIATDEDEYDIRDFQDYTMEGDELEQLMGLPYQLRLRVCDCNGRELQVHARMSEEYLDISEGMPVACVLLSTSQDFVQLAGMTDMCIPDAECWVGDYPYLDRPLFERMLAN 329
BLAST of mRNA_P-wetherbeei_contig1578.3.1 vs. uniprot
Match: A0A1Z5JCW8_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JCW8_FISSO) HSP 1 Score: 102 bits (255), Expect = 2.170e-20 Identity = 73/233 (31.33%), Postives = 116/233 (49.79%), Query Frame = 3
Query: 474 ETATRLLPLVATRDQWTQYWGRTEVQRAGKIFEAAVVTFLGLWACYFTSFFMGAGLTSILGAGFAFYWLLGPSLSAYRKN-RTLRGR-LAPGRDSAG----GVAGLFSA--------------RVTSVQ-------------EEYNPVTRRALRLLLLVEDEDGRALQFRVSMAPEY--RRIRQGMRVEVLLLATDPSFTRVVGVSDAFIPAADVWVGEYPYLERLQFRRLLA 1067
ET L T Q++ Y GRT +R G++ E+++V FLG++ YF SF +G ++LG F F+ +L P AY++N L GR L D+A GL+SA ++ V+ +E +T R L +L D GR LQ M+ EY + G+ V +LL+T +F+R+ G++D ++P ++W+G+YPYL+R +LA
Sbjct: 31 ETQNLLSTGPPTGAQYSVYIGRTPRERFGRLIESSIVGFLGVFFSYFLSFVIGGFFATLLGCIFFFWGILSPEFQAYQRNWEFLGGRPLVDMEDTAAKKDPDKTGLYSALFVGHLADLAVVEDAISDVEYDLDDFRDYTMDGDELEKLTGRPYLLRVLARDRTGRELQIHTRMSEEYVDGALETGLPVTAILLSTKRNFSRLAGITDLYVPDVNLWLGDYPYLDREHMEAMLA 263
BLAST of mRNA_P-wetherbeei_contig1578.3.1 vs. uniprot
Match: K9SQW4_9SYNE (Uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7502 TaxID=1173263 RepID=K9SQW4_9SYNE) HSP 1 Score: 97.8 bits (242), Expect = 2.910e-19 Identity = 80/220 (36.36%), Postives = 111/220 (50.45%), Query Frame = 3
Query: 456 LTPLSFETATRLLPLVATRDQWTQYWGRTE-VQRAGKIFEAAVVTFLGLWACYFTSFFMGAGLTSILGAGFA-FYWLLGPSLSAYRKNRTLRGRLAPGRDSAGGVAGLFSARVTSVQEEYNPVTRRALR------LLLLVEDEDGRALQFRVSMAPEYRRIRQGMRVEVLLLATDPSFTRVVGVS-DAFIPAADVWVGEYPYLERLQFRRLLASRYGASR 1088
+TPL + L+P V T DQ+ +WG ++ V R I A +VTF L+ +FF GL + AG YW+LGP +SA RKN LR G A + S V S QE+++ R A+ L + D G RV M EY+RI+ V +LL + DP F RV ++ DA++P ++WV +YPYL R F L +RY SR
Sbjct: 2 ITPLKRKKFDELIPAVPTSDQYQYFWGSSQDVFRRILISVALLVTFSLLYNRTPDNFF---GLLMFICAGLGGLYWMLGPVISAIRKNTKLRSLSQCGFWQAQVLDIYLSEEVLSRQEDFDQRGRLAVNYDTQSFFNLEIGDRTGYTTTLRVPMRREYKRIKLKQSVCMLLFSNDPKFRRVSKITTDAYLPQINLWVSDYPYLRRDVFSDL--TRYMLSR 216 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1578.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1578.3.1 >prot_P-wetherbeei_contig1578.3.1 ID=prot_P-wetherbeei_contig1578.3.1|Name=mRNA_P-wetherbeei_contig1578.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=404bp MATSSGRRRGGRRSSSFSRNKQAVGTACCLPLFIRCCSAWAFAPIRAAPLback to top mRNA from alignment at P-wetherbeei_contig1578:2053..4443- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1578.3.1 ID=mRNA_P-wetherbeei_contig1578.3.1|Name=mRNA_P-wetherbeei_contig1578.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2391bp|location=Sequence derived from alignment at P-wetherbeei_contig1578:2053..4443- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1578:2053..4443- >mRNA_P-wetherbeei_contig1578.3.1 ID=mRNA_P-wetherbeei_contig1578.3.1|Name=mRNA_P-wetherbeei_contig1578.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1212bp|location=Sequence derived from alignment at P-wetherbeei_contig1578:2053..4443- (Phaeothamnion wetherbeei SAG_119_79)back to top |