mRNA_P-wetherbeei_contig15756.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15756.1.1
Unique NamemRNA_P-wetherbeei_contig15756.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15756.1.1 vs. uniprot
Match: A0A836CD73_9STRA (Mo25-like-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD73_9STRA)

HSP 1 Score: 176 bits (447), Expect = 6.050e-50
Identity = 91/118 (77.12%), Postives = 96/118 (81.36%), Query Frame = 1
Query:   13 SENYVTRRQSLKLLGELLLDRSNFKVMMRYXXXXXXXXXXXXLLRDKSQNIQFEAFHVFKVFVANPKKPPEISKILLNNRDKLIVYLENFHNDKDDEQFREEKALLINTLIQLEPLPP 366
            SENYVTRRQSLKLLGELLLDRSNF VMMRY            LLRDKS NIQ+EAFHVFKVFVANPKKPPEI++IL+ NR KLI YLENFHNDKDDEQFR+EKALLI TL  LE  PP
Sbjct:  208 SENYVTRRQSLKLLGELLLDRSNFAVMMRYICNRDNLKKMMMLLRDKSPNIQYEAFHVFKVFVANPKKPPEITRILVANRAKLITYLENFHNDKDDEQFRDEKALLITTLEALEEPPP 325          
BLAST of mRNA_P-wetherbeei_contig15756.1.1 vs. uniprot
Match: A0A3L6V1E9_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A3L6V1E9_9STRA)

HSP 1 Score: 164 bits (415), Expect = 7.500e-46
Identity = 84/117 (71.79%), Postives = 92/117 (78.63%), Query Frame = 1
Query:    4 VVRSENYVTRRQSLKLLGELLLDRSNFKVMMRYXXXXXXXXXXXXLLRDKSQNIQFEAFHVFKVFVANPKKPPEISKILLNNRDKLIVYLENFHNDKDDEQFREEKALLINTLIQLE 354
            ++ SENYVTRRQSLKLLGE+LLDRSNF +MMRY            LLRD S NIQFEAFHVFKVFVANPKKP E+++ILLNN+DKLI YLE F NDKDD QF EEKALLI TL  LE
Sbjct:  188 LLSSENYVTRRQSLKLLGEILLDRSNFDIMMRYICKRDNLKMMMNLLRDTSANIQFEAFHVFKVFVANPKKPNEVTQILLNNKDKLIAYLEKFQNDKDDSQFVEEKALLIRTLGTLE 304          
BLAST of mRNA_P-wetherbeei_contig15756.1.1 vs. uniprot
Match: G4YX18_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YX18_PHYSP)

HSP 1 Score: 159 bits (403), Expect = 1.140e-45
Identity = 81/118 (68.64%), Postives = 92/118 (77.97%), Query Frame = 1
Query:    1 CVVRSENYVTRRQSLKLLGELLLDRSNFKVMMRYXXXXXXXXXXXXLLRDKSQNIQFEAFHVFKVFVANPKKPPEISKILLNNRDKLIVYLENFHNDKDDEQFREEKALLINTLIQLE 354
            C++ SENYVTRRQSLKLLGE+LLDRSNF +MM+Y            LLRD S NIQFEAFHVFKVFVANPKKP  IS+IL+NNR+KLI YL+NF N K+D QF EEKALLI TL  L+
Sbjct:   72 CLLMSENYVTRRQSLKLLGEILLDRSNFDIMMKYIGEKENLKMMMNLLRDTSANIQFEAFHVFKVFVANPKKPEAISQILVNNREKLIAYLKNFQNSKEDPQFIEEKALLIRTLEGLK 189          
BLAST of mRNA_P-wetherbeei_contig15756.1.1 vs. uniprot
Match: A0A6H5JQH7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH7_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 4.070e-45
Identity = 93/119 (78.15%), Postives = 106/119 (89.08%), Query Frame = 1
Query:    4 VVRSENYVTRRQSLKLLGELLLDRSNFKVMMRYXXXXXXXXXXXXLLRDKSQNIQFEAFHVFKVFVANPKKPPEISKILLNNRDKLIVYLENFHNDKDDEQFREEKALLINTL--IQLE 354
            ++RS NYVTRRQSLKLLGELLLDRSNF+VMMRY XXXXXXXXXXX    KS NIQ+EAFHVFKVFVANPKKPPE++KIL+NN+ KLI YLENFHND+DD QF+EEK LL++TL  +QLE
Sbjct:  205 LLRSINYVTRRQSLKLLGELLLDRSNFQVMMRYIXXXXXXXXXXXXXXXKSPNIQYEAFHVFKVFVANPKKPPEVTKILVNNKAKLIAYLENFHNDRDDAQFKEEKKLLVSTLSLLQLE 323          
BLAST of mRNA_P-wetherbeei_contig15756.1.1 vs. uniprot
Match: W7TQ01_9STRA (Calcium binding protein 39 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQ01_9STRA)

HSP 1 Score: 166 bits (419), Expect = 5.110e-45
Identity = 81/117 (69.23%), Postives = 93/117 (79.49%), Query Frame = 1
Query:    4 VVRSENYVTRRQSLKLLGELLLDRSNFKVMMRYXXXXXXXXXXXXLLRDKSQNIQFEAFHVFKVFVANPKKPPEISKILLNNRDKLIVYLENFHNDKDDEQFREEKALLINTLIQLE 354
            ++ S+NYVTRR SLK+LGE+LLDRSNF VMMRY            LLRDKS +IQFEAFHVFKVFVANPKKPP I KIL+ NRDKL+ YL +FH DKDDEQFREEK+LL+NTL  L+
Sbjct:  378 LLASDNYVTRRMSLKMLGEILLDRSNFNVMMRYISSKENLKMIMNLLRDKSASIQFEAFHVFKVFVANPKKPPAIVKILVTNRDKLVTYLTHFHTDKDDEQFREEKSLLVNTLANLD 494          
BLAST of mRNA_P-wetherbeei_contig15756.1.1 vs. uniprot
Match: K3WY23_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WY23_GLOUD)

HSP 1 Score: 162 bits (409), Expect = 5.870e-45
Identity = 82/119 (68.91%), Postives = 93/119 (78.15%), Query Frame = 1
Query:    4 VVRSENYVTRRQSLKLLGELLLDRSNFKVMMRYXXXXXXXXXXXXLLRDKSQNIQFEAFHVFKVFVANPKKPPEISKILLNNRDKLIVYLENFHNDKDDEQFREEKALLINTLIQLEPL 360
            ++ SENYVTRRQSLKLLGE+LLDRSNF +MM+Y            LLRD S NIQFEAFHVFKVFVANPKKP  IS+ILLNNRDKL+ YL+NF N K+D QF EEKALLI TL  L+P+
Sbjct:  212 LLNSENYVTRRQSLKLLGEILLDRSNFDIMMKYIGEKENLKMMMNLLRDTSANIQFEAFHVFKVFVANPKKPDAISQILLNNRDKLVAYLKNFQNSKEDPQFIEEKALLIRTLEGLQPV 330          
BLAST of mRNA_P-wetherbeei_contig15756.1.1 vs. uniprot
Match: A0A485KMR1_9STRA (Aste57867_9258 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KMR1_9STRA)

HSP 1 Score: 161 bits (408), Expect = 9.090e-45
Identity = 82/117 (70.09%), Postives = 93/117 (79.49%), Query Frame = 1
Query:    4 VVRSENYVTRRQSLKLLGELLLDRSNFKVMMRYXXXXXXXXXXXXLLRDKSQNIQFEAFHVFKVFVANPKKPPEISKILLNNRDKLIVYLENFHNDKDDEQFREEKALLINTLIQLE 354
            ++ SENYVTRRQSLKLLGE+LLD+SNF +MMRY            LLRD S NIQFEAFHVFKVFVANPKKP EI++ILLNN+DKLI YLE F N+K++EQF EEKALLI TL  LE
Sbjct:  213 LLSSENYVTRRQSLKLLGEILLDKSNFDIMMRYICKRDNLKMMMNLLRDTSANIQFEAFHVFKVFVANPKKPNEITQILLNNKDKLIAYLEKFQNEKEEEQFVEEKALLIRTLSTLE 329          
BLAST of mRNA_P-wetherbeei_contig15756.1.1 vs. uniprot
Match: A0A6G0X7F6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X7F6_9STRA)

HSP 1 Score: 161 bits (408), Expect = 9.090e-45
Identity = 83/117 (70.94%), Postives = 93/117 (79.49%), Query Frame = 1
Query:    4 VVRSENYVTRRQSLKLLGELLLDRSNFKVMMRYXXXXXXXXXXXXLLRDKSQNIQFEAFHVFKVFVANPKKPPEISKILLNNRDKLIVYLENFHNDKDDEQFREEKALLINTLIQLE 354
            ++ SENYVTRRQSLKLLGE+LLDRSNF VMMRY            LLRD S NIQFEAFHVFKVFVANPKKP +I++ILLNN+DKLI YLE F N+K++EQF EEKALLI TL  LE
Sbjct:  213 LLSSENYVTRRQSLKLLGEILLDRSNFDVMMRYICKRENLKMMMNLLRDTSANIQFEAFHVFKVFVANPKKPNDITQILLNNKDKLIAYLEKFQNEKEEEQFVEEKALLIRTLRTLE 329          
BLAST of mRNA_P-wetherbeei_contig15756.1.1 vs. uniprot
Match: A0A7S3UNE5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UNE5_HETAK)

HSP 1 Score: 156 bits (395), Expect = 2.850e-44
Identity = 77/113 (68.14%), Postives = 89/113 (78.76%), Query Frame = 1
Query:    4 VVRSENYVTRRQSLKLLGELLLDRSNFKVMMRYXXXXXXXXXXXXLLRDKSQNIQFEAFHVFKVFVANPKKPPEISKILLNNRDKLIVYLENFHNDKDDEQFREEKALLINTL 342
            ++ SENYVTRRQSLKLLGELLL+R+NF VMM+Y            ++RD S NIQFEAFHVFKVFVANP+KP E+  ILLNNRDKL+ +LENFHNDK+D QF EEK LLI TL
Sbjct:  103 LLTSENYVTRRQSLKLLGELLLERANFNVMMQYISDKSNLKRVMIMMRDNSANIQFEAFHVFKVFVANPRKPAEVEAILLNNRDKLVAFLENFHNDKEDPQFIEEKQLLIATL 215          
BLAST of mRNA_P-wetherbeei_contig15756.1.1 vs. uniprot
Match: H3G895_PHYRM (Uncharacterized protein n=45 Tax=Peronosporaceae TaxID=4777 RepID=H3G895_PHYRM)

HSP 1 Score: 160 bits (404), Expect = 3.660e-44
Identity = 81/118 (68.64%), Postives = 93/118 (78.81%), Query Frame = 1
Query:    1 CVVRSENYVTRRQSLKLLGELLLDRSNFKVMMRYXXXXXXXXXXXXLLRDKSQNIQFEAFHVFKVFVANPKKPPEISKILLNNRDKLIVYLENFHNDKDDEQFREEKALLINTLIQLE 354
            C++ SENYVTRRQSLKLLGE+LLDRSNF +MM+Y            LLRD S NIQFEAFHVFKVFVANPKKP  IS+IL+NNR+KLI YL+NF N+K+D QF EEKALLI TL  L+
Sbjct:  211 CLLMSENYVTRRQSLKLLGEILLDRSNFDIMMKYIGEKENLKMMMNLLRDTSANIQFEAFHVFKVFVANPKKPEAISQILVNNREKLIAYLKNFQNNKEDPQFIEEKALLIRTLEGLK 328          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15756.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CD73_9STRA6.050e-5077.12Mo25-like-domain-containing protein n=1 Tax=Tribon... [more]
A0A3L6V1E9_9STRA7.500e-4671.79Uncharacterized protein n=5 Tax=Aphanomyces TaxID=... [more]
G4YX18_PHYSP1.140e-4568.64Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A6H5JQH7_9PHAE4.070e-4578.15Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
W7TQ01_9STRA5.110e-4569.23Calcium binding protein 39 n=3 Tax=Monodopsidaceae... [more]
K3WY23_GLOUD5.870e-4568.91Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A485KMR1_9STRA9.090e-4570.09Aste57867_9258 protein n=1 Tax=Aphanomyces stellat... [more]
A0A6G0X7F6_9STRA9.090e-4570.94Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A7S3UNE5_HETAK2.850e-4468.14Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
H3G895_PHYRM3.660e-4468.64Uncharacterized protein n=45 Tax=Peronosporaceae T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15756contigP-wetherbeei_contig15756:215..1507 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog36331.EPrPI00000021963
PFAMsMo25
Model size666
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons3
Evalue4.81e-46
EggNOG OGsKOG1566@1|root,KOG1566@2759|Eukaryota,1MCYX@121069|Pythiales
Ec32 ortholog descriptionArmadillo-type fold
Ec32 orthologEc-18_003190.1
Descriptioncalcium-binding protein. Source PGD
Cds size666
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186066.3704245-CDS-P-wetherbeei_contig15756:214..5861683186066.3704245-CDS-P-wetherbeei_contig15756:214..586Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15756 215..586 -
1683186066.384984-CDS-P-wetherbeei_contig15756:935..10611683186066.384984-CDS-P-wetherbeei_contig15756:935..1061Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15756 936..1061 -
1683186066.4002328-CDS-P-wetherbeei_contig15756:1339..15071683186066.4002328-CDS-P-wetherbeei_contig15756:1339..1507Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15756 1340..1507 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15756.1.1prot_P-wetherbeei_contig15756.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15756 215..1507 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15756.1.1

>prot_P-wetherbeei_contig15756.1.1 ID=prot_P-wetherbeei_contig15756.1.1|Name=mRNA_P-wetherbeei_contig15756.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=222bp
CVVRSENYVTRRQSLKLLGELLLDRSNFKVMMRYISSKENLKMMMNLLRD
KSQNIQFEAFHVFKVFVANPKKPPEISKILLNNRDKLIVYLENFHNDKDD
EQFREEKALLINTLIQLEPLPPDLGGGPDSAFASSGGGSSSVFGSVPGGG
LGGYGAGSGGSGGGGDDELSAAGTGGAGGRRYTEADALTSDGGGGGGGGG
GGDGAAHRRGATTGVNVAGRT*
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mRNA from alignment at P-wetherbeei_contig15756:215..1507-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15756.1.1 ID=mRNA_P-wetherbeei_contig15756.1.1|Name=mRNA_P-wetherbeei_contig15756.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1293bp|location=Sequence derived from alignment at P-wetherbeei_contig15756:215..1507- (Phaeothamnion wetherbeei SAG_119_79)
TGTGTTGTCAGATCGGAGAACTACGTGACGCGGCGGCAGTCGCTGAAGCT GCTGGGGGAGCTGCTGCTCGACCGTAGCAACTTCAAGGTGATGATGCGCT ACATCTCCAGCAAAGAAAACCTCAAGATGATGATGAACCTCCTCCGCGAC AAGAGCCAGAACATCCAGGTAAGCTGCAAAAGTTCGACAAACCGCCGGTA GTTATCGGTCGGTCTATCTGTTTCTGGCTCGGTTCAGGCGGTCCGGTCCG CTCACTGTTCCAGGTTCGGACGGTTGACTGAGGACAGCGTTCTTTCTTTA TTTTCTTCCCTTTCGGCGTTAAGGACAATCAACCGATGATTGCTCGCGCT GCGACCTTGTCCCTTTCTCCGCTGCCTTCCGCGACTTCTCACTACCGGCC GTTGCCGGCATAATCTGCACCGCTCTGCCGGGTCGCGGCCTTTCAGTTCG AGGCGTTCCACGTGTTCAAGGTGTTTGTGGCGAACCCGAAAAAGCCGCCG GAAATCTCAAAGATCCTCCTCAACAACCGCGACAAGCTCATCGTCTACCT CGAGAACTTCCACAACGACAAGGTTAGCTGGAAGCCAAGTCAGAATATTC ATCTGTGGCTTTTTTGGTTTGTCTCTTTGCCTTCAATGGTACCTTTGGTG GCGGTGCTTGCGTTCTCGGGTGCTCTCATTTCGTGGTTCGGCCCGCTTTT GCACGGCGATGGTTTCCTTTCTGTTCTGAAGCTGCCCAAATGTCTTGACT GCTTTTGGCATAGCACCGCGTGGCGTCTCCTTCCTCCCGTTCCGGACCGC CGCTTTACCCCTCGATCCGTTTCCGTGCCTGTCATCGCCCCTCCCCGGTT CTACGTGCCGTGCACTTTCCGGTCGACCACCTCTTCATGCTCGACCCATC CATCCCCGCTTTGTCCTGTAGGACGACGAGCAATTCCGAGAGGAGAAGGC GCTGCTGATCAATACGCTGATCCAGCTCGAGCCGCTCCCGCCGGACCTCG GTGGAGGCCCAGATAGCGCCTTTGCGAGTAGCGGCGGCGGCAGCAGCAGC GTCTTCGGGAGCGTCCCGGGCGGCGGGCTCGGCGGCTACGGCGCCGGTAG CGGCGGCAGCGGCGGCGGCGGCGACGACGAGTTATCCGCTGCTGGCACTG GCGGTGCCGGCGGAAGAAGGTATACTGAAGCCGATGCCTTGACCAGCGAT GGAGGTGGGGGTGGCGGCGGCGGCGGCGGTGGCGACGGCGCAGCACATCG CCGAGGAGCAACAACAGGAGTAAACGTGGCAGGAAGAACATAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15756:215..1507-

>mRNA_P-wetherbeei_contig15756.1.1 ID=mRNA_P-wetherbeei_contig15756.1.1|Name=mRNA_P-wetherbeei_contig15756.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=666bp|location=Sequence derived from alignment at P-wetherbeei_contig15756:215..1507- (Phaeothamnion wetherbeei SAG_119_79)
TGTGTTGTCAGATCGGAGAACTACGTGACGCGGCGGCAGTCGCTGAAGCT
GCTGGGGGAGCTGCTGCTCGACCGTAGCAACTTCAAGGTGATGATGCGCT
ACATCTCCAGCAAAGAAAACCTCAAGATGATGATGAACCTCCTCCGCGAC
AAGAGCCAGAACATCCAGTTCGAGGCGTTCCACGTGTTCAAGGTGTTTGT
GGCGAACCCGAAAAAGCCGCCGGAAATCTCAAAGATCCTCCTCAACAACC
GCGACAAGCTCATCGTCTACCTCGAGAACTTCCACAACGACAAGGACGAC
GAGCAATTCCGAGAGGAGAAGGCGCTGCTGATCAATACGCTGATCCAGCT
CGAGCCGCTCCCGCCGGACCTCGGTGGAGGCCCAGATAGCGCCTTTGCGA
GTAGCGGCGGCGGCAGCAGCAGCGTCTTCGGGAGCGTCCCGGGCGGCGGG
CTCGGCGGCTACGGCGCCGGTAGCGGCGGCAGCGGCGGCGGCGGCGACGA
CGAGTTATCCGCTGCTGGCACTGGCGGTGCCGGCGGAAGAAGGTATACTG
AAGCCGATGCCTTGACCAGCGATGGAGGTGGGGGTGGCGGCGGCGGCGGC
GGTGGCGACGGCGCAGCACATCGCCGAGGAGCAACAACAGGAGTAAACGT
GGCAGGAAGAACATAG
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