mRNA_P-wetherbeei_contig15751.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15751.1.1
Unique NamemRNA_P-wetherbeei_contig15751.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15751.1.1 vs. uniprot
Match: D8LRB5_ECTSI (Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB5_ECTSI)

HSP 1 Score: 362 bits (930), Expect = 5.020e-116
Identity = 178/222 (80.18%), Postives = 193/222 (86.94%), Query Frame = 1
Query:    1 KQVEEAYRKAKNRLIISDYDGTLTQLQSLPQLAGPPPFVTQLLESLTKDPKNSLFIISGRERRFMDTWLGKLHVGLAAEYGFYYKLP-GEDWLCIGEDLDLSWKAAVQPIMQYFTERTPGTYIEKKESSLSWHYRDADPHFGLWQAKDMQIHMEDVLTNLPLEILQGNRMVEVRHQAANKSAVAEQLLRRCAEPHMLHDRGEVDFILCVGDDKSDEDMFQTV 663
            K+V EAY+KAKNRLIISDYDGTLT LQSLPQLAGPP  VT  L+SL +D KN LFIISGRERRFMDTWLGKL  GLAAEYGFYY+LP    W C G+DLDLSWK  V+PIMQYFTERTPGTYIE KESSL+WHYRDADPHFGLWQAKDMQIHMEDVL+NLPLEILQGNRMVEVRHQAANKS VAE++L+  +    +  RGEVDFILCVGDD+SDEDMFQTV
Sbjct:  571 KEVLEAYKKAKNRLIISDYDGTLTTLQSLPQLAGPPAVVTNFLDSLCRDYKNRLFIISGRERRFMDTWLGKLRAGLAAEYGFYYRLPEATQWQCSGQDLDLSWKDVVRPIMQYFTERTPGTYIENKESSLTWHYRDADPHFGLWQAKDMQIHMEDVLSNLPLEILQGNRMVEVRHQAANKSMVAEEVLKLLSTEQSVRQRGEVDFILCVGDDRSDEDMFQTV 792          
BLAST of mRNA_P-wetherbeei_contig15751.1.1 vs. uniprot
Match: A0A6H5J883_9PHAE (GT20 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J883_9PHAE)

HSP 1 Score: 355 bits (912), Expect = 9.600e-116
Identity = 178/226 (78.76%), Postives = 192/226 (84.96%), Query Frame = 1
Query:    1 KQVEEAYRKAKNRLIISDYDGTLTQLQSLPQLAGPPPFVTQLLESLTKDPKNSLFIISGRERRFMDTWLGKLHVGLAAEYGFYYKLP-GEDWLCIGEDLDLSWKAAVQPIMQYFTERTPGTYIEKKESSLSWHYRDADPHFGLWQAKDMQIHMEDVLTNLPLEILQGNRMVEVRHQ----AANKSAVAEQLLRRCAEPHMLHDRGEVDFILCVGDDKSDEDMFQTV 663
            K+V EAY+KAKNRLIISDYDGTLT LQSLPQLAGPP  VT  L+SL +D KN LFIISGRERRFMDTWLGKL  GLAAEYGFYY+LP    W C G+DLDLSWK  V+PIMQYFTERTPGTYIE KESSL+WHYRDADPHFGLWQAKDMQIHMEDVL NLPLEILQGNRMVEVRHQ    AANKS VAE++L+  +    +  RGEVDFILCVGDD+SDEDMFQTV
Sbjct:  388 KEVLEAYKKAKNRLIISDYDGTLTTLQSLPQLAGPPAVVTNFLDSLCRDYKNRLFIISGRERRFMDTWLGKLRAGLAAEYGFYYRLPEATQWQCSGQDLDLSWKDVVRPIMQYFTERTPGTYIENKESSLTWHYRDADPHFGLWQAKDMQIHMEDVLHNLPLEILQGNRMVEVRHQVRYQAANKSMVAEEVLKLLSTEQSVRQRGEVDFILCVGDDRSDEDMFQTV 613          
BLAST of mRNA_P-wetherbeei_contig15751.1.1 vs. uniprot
Match: A0A835Z8I3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8I3_9STRA)

HSP 1 Score: 355 bits (912), Expect = 5.340e-115
Identity = 171/222 (77.03%), Postives = 192/222 (86.49%), Query Frame = 1
Query:    1 KQVEEAYRKAKNRLIISDYDGTLTQLQSLPQLAGPPPFVTQLLESLTKDPKNSLFIISGRERRFMDTWLGKLHVGLAAEYGFYYKLPGED-WLCIGEDLDLSWKAAVQPIMQYFTERTPGTYIEKKESSLSWHYRDADPHFGLWQAKDMQIHMEDVLTNLPLEILQGNRMVEVRHQAANKSAVAEQLLRRCAEPHMLHDRGEVDFILCVGDDKSDEDMFQTV 663
            K+V  AY +AK RLIISDYDGTLTQLQSLPQLAGPPPFVT LLE+L +DPKN+LFIISGRERRFMD W G L VGLAAEYGFYY+LP +D W C G+ LDL+WK  V PIMQYFTERTPGTYIE KESSL+WHYRDADPHFGLWQAKDMQI+MED L+N+PLEILQGNRMVEVRHQAANKS VA+++L+  +EP    + GEVDF+LCVGDD+SDEDMF  V
Sbjct:  502 KEVRHAYAEAKRRLIISDYDGTLTQLQSLPQLAGPPPFVTSLLENLCRDPKNTLFIISGRERRFMDRWFGNLRVGLAAEYGFYYRLPNQDQWQCAGQGLDLTWKNVVHPIMQYFTERTPGTYIENKESSLTWHYRDADPHFGLWQAKDMQINMEDSLSNMPLEILQGNRMVEVRHQAANKSFVADRVLKAMSEPAARAEHGEVDFVLCVGDDRSDEDMFTMV 723          
BLAST of mRNA_P-wetherbeei_contig15751.1.1 vs. uniprot
Match: K8YXH8_NANGC (Alpha,alpha-trehalose-phosphate synthase (UDP-forming) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YXH8_NANGC)

HSP 1 Score: 309 bits (791), Expect = 1.130e-95
Identity = 144/219 (65.75%), Postives = 183/219 (83.56%), Query Frame = 1
Query:   16 AYRKAKNRLIISDYDGTLTQLQSLPQLAGPPPFVTQLLESLTKDPKNSLFIISGRERRFMDTWLGKLHVGLAAEYGFYYKLPGED-WLCIGEDLDLSWKAAVQPIMQYFTERTPGTYIEKKESSLSWHYRDADPHFGLWQAKDMQIHMEDVLTNLPLEILQGNRMVEVRHQAANKSAVAEQLLRRCAEPHMLHDRGE--VDFILCVGDDKSDEDMFQTV 663
            AY +A+NRLI++DYDGTLTQLQS+PQLA P P++T LL+SL+KDP+N++ I+SGRE+RFMDTWLGKL + LAAEYGFYY++P E+ W  +  ++D SW+  V+PI++YFTERTPGTYIEKKESSL+WHYRDADP+FG WQAKDMQI +EDVL+NLPLEI+QGNRMVEVRHQ A+K  V E +LR  A+P       +  +DF+ CVGDD++DEDMFQ +
Sbjct:  548 AYERARNRLIVADYDGTLTQLQSVPQLATPSPYITNLLDSLSKDPRNTVVIVSGREKRFMDTWLGKLKMALAAEYGFYYRMPEEEEWQTMAPEVDTSWRDIVRPILEYFTERTPGTYIEKKESSLTWHYRDADPNFGSWQAKDMQIQLEDVLSNLPLEIIQGNRMVEVRHQGASKGMVVESVLRYMADPSRGAKNSDTPLDFVFCVGDDRTDEDMFQVL 766          
BLAST of mRNA_P-wetherbeei_contig15751.1.1 vs. uniprot
Match: A0A8J2S9Z6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S9Z6_9STRA)

HSP 1 Score: 302 bits (774), Expect = 6.270e-94
Identity = 145/232 (62.50%), Postives = 183/232 (78.88%), Query Frame = 1
Query:    4 QVEEAYRKAKNRLIISDYDGTLTQLQSLPQLAGPPPFVTQLLESLTKDPKNSLFIISGRERRFMDTWLGKLHVGLAAEYGFYYKLPG-EDWLCIGEDLDLSWKAAVQPIMQYFTERTPGTYIEKKESSLSWHYRDADPHFGLWQAKDMQIHMEDVLTNLPLEILQGNRMVEVRHQAANKSAVAEQLLRRCAE-------PHMLHDRGEV------DFILCVGDDKSDEDMFQ 657
            +V +AY++A  RL+++DYDGTLTQ+QSLP+LA P P VTQLL +L++DP+N+++++SGRERRFM+ WLG+L VGLAAE+GF ++ PG E+W  +G DLD SWK  V+PIMQYF ERTPGTYIE KESSL+WHYRDADPHFG WQAKDMQIHMEDV++ LPLEI+QGNR+VEVRH   NKS V E++LR+          P    D  +V      DF+LCVGDD+SDEDM+Q
Sbjct:  596 RVLQAYQRASRRLVVTDYDGTLTQMQSLPRLATPAPVVTQLLATLSRDPRNTVYVVSGRERRFMEKWLGRLKVGLAAEFGFCHRAPGSEEWTSLGRDLDTSWKDVVRPIMQYFAERTPGTYIESKESSLAWHYRDADPHFGAWQAKDMQIHMEDVMSTLPLEIIQGNRLVEVRHVGVNKSLVLEEVLRQGPRNGYDPPPPSRSEDSPQVALTEDFDFVLCVGDDRSDEDMYQ 827          
BLAST of mRNA_P-wetherbeei_contig15751.1.1 vs. uniprot
Match: F0Y2I9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2I9_AURAN)

HSP 1 Score: 292 bits (747), Expect = 2.090e-90
Identity = 140/215 (65.12%), Postives = 172/215 (80.00%), Query Frame = 1
Query:   37 RLIISDYDGTLTQLQSLPQLAGPPPFVTQLLESLTKDPKNSLFIISGRERRFMDTWLGKLHVGLAAEYGFYYKLPGED---WLCIGEDLDLSWKAAVQPIMQYFTERTPGTYIEKKESSLSWHYRDADPHFGLWQAKDMQIHMEDVLTNLPLEILQGNRMVEVRHQAANKSAVAEQLLRRCAEPHMLHDRGEV-----DFILCVGDDKSDEDMFQ 657
            RL+++DYDGTLTQ+QSLPQLA P P VTQLL +L +D +N+++++SGRERRFMD WLGKL VGLAAE+G+ ++ P ++   W  +G +LD SWK  V+PIMQYF ERTPGTYIE KESSL+WHYRDADPHFG WQAKDMQIHMEDV++NLPLEI+QGNR+VEVRH   NKS V E++LR       +  RGE      DF+LCVGDD+SDEDM+Q
Sbjct:  561 RLVVTDYDGTLTQIQSLPQLATPAPVVTQLLATLARDTRNTVYVMSGRERRFMDKWLGKLKVGLAAEFGYCHRAPDDEQGVWKSLGRELDTSWKDVVRPIMQYFAERTPGTYIESKESSLAWHYRDADPHFGAWQAKDMQIHMEDVMSNLPLEIIQGNRLVEVRHVGVNKSLVLEEVLR-------MGPRGETADVDFDFVLCVGDDRSDEDMYQ 768          
BLAST of mRNA_P-wetherbeei_contig15751.1.1 vs. uniprot
Match: A0A7S1UK50_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UK50_9STRA)

HSP 1 Score: 283 bits (723), Expect = 5.790e-88
Identity = 151/277 (54.51%), Postives = 179/277 (64.62%), Query Frame = 1
Query:    7 VEEAYRKAKNRLIISDYDGTLTQLQSLPQLAGPPPFVTQLLESLTKDPKNSLFIISGRERRFMDTWLGKLHVGLAAEYGFYYKLPGE-DWLCIGEDLDLSWKAAVQPIMQYFTERTPGTYIEKKESSLSWHYRDADPHFGLWQAKDMQIHMEDVLTNLPLEILQGNRMVEVRHQAANKSAVAEQLLRRCA-------------------------------------------------EPHMLHDRG-----------EVDFILCVGDDKSDEDMF 654
            V EAYR AK RLIISDYDGTLT LQSLPQLA P   +T +L+ + +DPKN+L IISGRERRFMDTWLG+L VGLAAE+G YY+LP + DW  +  D+D++WK  V+PIM+YF ERTPGTYIE K+SSL+WHYRDADPHFG WQAKDMQ+HMEDVLTNLPLEILQGN+++EVRH+ ANKS V E +L R                                                   + H   D G           +VDF+ CVGDD+SDEDMF
Sbjct:  361 VLEAYRSAKKRLIISDYDGTLTTLQSLPQLATPSHTITSILDVIARDPKNTLLIISGRERRFMDTWLGRLRVGLAAEHGSYYRLPWDVDWQTLCSDVDVTWKKVVRPIMEYFEERTPGTYIEDKDSSLTWHYRDADPHFGSWQAKDMQMHMEDVLTNLPLEILQGNKVLEVRHRNANKSTVLEAVLTRLVSIGNETNGAGVPQPPTAGGAEAGEASAPRTIAEDEELVRNLAKKSQSDGQLHAGADDGKPAFDMPLAFEQVDFVFCVGDDRSDEDMF 637          
BLAST of mRNA_P-wetherbeei_contig15751.1.1 vs. uniprot
Match: A0A4P9X8F0_9FUNG (Uncharacterized protein n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9X8F0_9FUNG)

HSP 1 Score: 211 bits (536), Expect = 2.960e-60
Identity = 104/219 (47.49%), Postives = 153/219 (69.86%), Query Frame = 1
Query:   19 YRKAKNRLIISDYDGTLTQLQSLPQLAGPPPFVTQLLESLTKDPKNSLFIISGRERRFMDTWLGKL-HVGLAAEYGFYYKLPGED--WLCIGEDLDLSWKAAVQPIMQYFTERTPGTYIEKKESSLSWHYRDADPHFGLWQAKDMQIHMEDVLTN-LPLEILQGNRMVEVRHQAANKSAVAEQLLRRCAEPHMLHDRGEVDFILCVGDDKSDEDMFQTV 663
            YR AK+RL++ DYDGTLT +Q  P  A P   +   +  LT DP+N +F+ISGR+++F++ WLG +  +GL+AE+G + K P E+  W+ +GE+LD SWK  VQ I  Y+TERT G+++E KE +++WHYR ADP +GL+QAK+ Q H+E+ +T+ LP+EI+ G + +EVRH A NK  + ++LL   A P       E DF+ C GDDK+DEDMF+++
Sbjct:  492 YRGAKHRLLLFDYDGTLTPIQKTPGAAVPSQQMIDAMRVLTADPRNMVFVISGRDQQFLEHWLGSIPRLGLSAEHGCFIKYPDENARWINLGENLDFSWKQEVQEIFDYYTERTQGSFVETKECAMTWHYRMADPEYGLFQAKECQNHLENAITSKLPIEIMVGKKNLEVRHIAMNKGEIVKRLL--AAHP-------ETDFVFCAGDDKTDEDMFRSL 701          
BLAST of mRNA_P-wetherbeei_contig15751.1.1 vs. uniprot
Match: F4P9D1_BATDJ (Uncharacterized protein n=1 Tax=Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) TaxID=684364 RepID=F4P9D1_BATDJ)

HSP 1 Score: 203 bits (517), Expect = 5.000e-58
Identity = 95/218 (43.58%), Postives = 155/218 (71.10%), Query Frame = 1
Query:   16 AYRKAKNRLIISDYDGTLTQLQSLPQLAGPPPFVTQLLESLTKDPKNSLFIISGRERRFMDTWLGKL-HVGLAAEYGFYYKLPGEDWLCIGEDLDLSWKAAVQPIMQYFTERTPGTYIEKKESSLSWHYRDADPHFGLWQAKDMQIHMED-VLTNLPLEILQGNRMVEVRHQAANKSAVAEQLLRRCAEPHMLHDRGEVDFILCVGDDKSDEDMFQTV 663
            +Y  A+ RL++ DYDGTLT ++ +P  A PPP + + ++ L +DPKN +F+ISGR++  +DTWLG + ++GL+AE+G + K PG  W+ +  ++DL+WKA V  I  +FTERT G+++E K  +++WHYR ADP +G +QAK+ Q+H+E+ +L+ LP+EIL G + +EVR  + NK  + ++L+++      L ++   DF+ CVGDD++DEDMF+ +
Sbjct:  420 SYTHAQRRLLMFDYDGTLTPIKKVPNAALPPPDMLKAMQILVQDPKNVVFVISGRDQACLDTWLGHIDNLGLSAEHGSFIKYPGGKWINLATEIDLNWKAPVAEIFNFFTERTLGSFVEHKRYAITWHYRLADPDYGTFQAKECQMHLENAILSKLPVEILLGKKNLEVRPISMNKGEIVKRLVQQ-----QLQNQPPCDFVYCVGDDRTDEDMFKAL 632          
BLAST of mRNA_P-wetherbeei_contig15751.1.1 vs. uniprot
Match: A0A162TBT3_PHYB8 (Trehalose 6-phosphate phosphatase n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162TBT3_PHYB8)

HSP 1 Score: 192 bits (489), Expect = 7.060e-58
Identity = 90/219 (41.10%), Postives = 140/219 (63.93%), Query Frame = 1
Query:    7 VEEAYRKAKNRLIISDYDGTLTQLQSLPQLAGPPPFVTQLLESLTKDPKNSLFIISGRERRFMDTWLGKLHVGLAAEYGFYYKLPGE---DWLCIGEDLDLSWKAAVQPIMQYFTERTPGTYIEKKESSLSWHYRDADPHFGLWQAKDMQIHMEDVLTNLPLEILQGNRMVEVRHQAANKSAVAEQLLRRCAEPHMLHDRGEVDFILCVGDDKSDEDMF 654
            + +A +  K +L++ DYDGTLT    LP+ A P   V   L++L   P   ++I+SGR R  +D W     VGL+AE+G +YK P      W C+ E +D SWK  ++P+ Q++TERTPG++IE+KE +L+WHYR+ADP FG WQA ++Q+++E +L+++ L I+ GN+ +E+R  + +KS     +L+    P +       DFILC+GD K+DE +F
Sbjct:   12 LSQAAKSTKKKLVLLDYDGTLTTTHKLPEFAKPSQTVLDHLKTLASQPDTYVYILSGRGRHHLDEWFASTGVGLSAEHGCFYKHPANIHNKWYCLVEQVDPSWKETIRPLFQHYTERTPGSFIEEKEINLTWHYRNADPEFGSWQATELQVNLEKLLSHMALSIVLGNKTLELRPSSIDKSTAVRSILKDLQLPSL-------DFILCIGDGKTDEVVF 223          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15751.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRB5_ECTSI5.020e-11680.18Trehalose 6-phosphate synthase, family GT20 / Treh... [more]
A0A6H5J883_9PHAE9.600e-11678.76GT20 protein (Fragment) n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z8I3_9STRA5.340e-11577.03Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K8YXH8_NANGC1.130e-9565.75Alpha,alpha-trehalose-phosphate synthase (UDP-form... [more]
A0A8J2S9Z6_9STRA6.270e-9462.50Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0Y2I9_AURAN2.090e-9065.12Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S1UK50_9STRA5.790e-8854.51Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A4P9X8F0_9FUNG2.960e-6047.49Uncharacterized protein n=1 Tax=Caulochytrium prot... [more]
F4P9D1_BATDJ5.000e-5843.58Uncharacterized protein n=1 Tax=Batrachochytrium d... [more]
A0A162TBT3_PHYB87.060e-5841.10Trehalose 6-phosphate phosphatase n=1 Tax=Phycomyc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15751contigP-wetherbeei_contig15751:207..1489 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog44056.XP_009034302.1
Preferred nameTPS3
PFAMsGlyco_transf_20,Trehalose_PPase
Model size663
Max annot lvl2759|Eukaryota
KEGG rclassRC00005,RC00017,RC00049,RC02748
KEGG koko:K01087,ko:K16055
KEGG ReactionR02737,R02778
KEGG Pathwayko00500,ko01100,map00500,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0003825,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005984,GO:0005991,GO:0005992,GO:0006793,GO:0006796,GO:0006950,GO:0007154,GO:0007165,GO:0007275,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009311,GO:0009312,GO:0009743,GO:0009756,GO:0009790,GO:0009791,GO:0009793,GO:0009832,GO:0009987,GO:0010033,GO:0010154,GO:0010182,GO:0016051,GO:0016311,GO:0016740,GO:0016757,GO:0016758,GO:0016787,GO:0016788,GO:0016791,GO:0022414,GO:0023052,GO:0032501,GO:0032502,GO:0033554,GO:0034637,GO:0035251,GO:0042221,GO:0042546,GO:0042578,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044424,GO:0044464,GO:0046351,GO:0046527,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051301,GO:0051716,GO:0061458,GO:0065007,GO:0070413,GO:0070887,GO:0071310,GO:0071322,GO:0071554,GO:0071669,GO:0071704,GO:0071840,GO:1901576,GO:1901700,GO:1901701
Exons3
Evalue3.43e-91
EggNOG OGsCOG1877@1|root,KOG1050@2759|Eukaryota
Ec32 ortholog descriptionTrehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase
Ec32 orthologEc-06_003140.1
EC2.4.1.15,3.1.3.12
Descriptiontrehalose biosynthetic process
Cds size663
COG categoryG
CAZyGT20
BRITEko00000,ko00001,ko01000,ko01003
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186066.244544-CDS-P-wetherbeei_contig15751:206..3791683186066.244544-CDS-P-wetherbeei_contig15751:206..379Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15751 207..379 +
1683186066.2538676-CDS-P-wetherbeei_contig15751:811..11331683186066.2538676-CDS-P-wetherbeei_contig15751:811..1133Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15751 812..1133 +
1683186066.2677207-CDS-P-wetherbeei_contig15751:1321..14891683186066.2677207-CDS-P-wetherbeei_contig15751:1321..1489Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15751 1322..1489 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15751.1.1prot_P-wetherbeei_contig15751.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15751 207..1489 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15751.1.1

>prot_P-wetherbeei_contig15751.1.1 ID=prot_P-wetherbeei_contig15751.1.1|Name=mRNA_P-wetherbeei_contig15751.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=221bp
KQVEEAYRKAKNRLIISDYDGTLTQLQSLPQLAGPPPFVTQLLESLTKDP
KNSLFIISGRERRFMDTWLGKLHVGLAAEYGFYYKLPGEDWLCIGEDLDL
SWKAAVQPIMQYFTERTPGTYIEKKESSLSWHYRDADPHFGLWQAKDMQI
HMEDVLTNLPLEILQGNRMVEVRHQAANKSAVAEQLLRRCAEPHMLHDRG
EVDFILCVGDDKSDEDMFQTV
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mRNA from alignment at P-wetherbeei_contig15751:207..1489+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15751.1.1 ID=mRNA_P-wetherbeei_contig15751.1.1|Name=mRNA_P-wetherbeei_contig15751.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1283bp|location=Sequence derived from alignment at P-wetherbeei_contig15751:207..1489+ (Phaeothamnion wetherbeei SAG_119_79)
AAACAGGTGGAGGAGGCGTACCGCAAGGCCAAGAATCGTCTGATCATCTC GGACTACGACGGAACGCTGACACAGCTGCAGTCGCTGCCGCAGCTTGCCG GGCCGCCGCCCTTCGTAACGCAGCTGCTCGAGAGCCTCACCAAGGACCCC AAGAACTCCCTCTTCATCATCAGGTCCGTCCCAGTCTATCCTGACCGTCT TTGGGCGCCTTTTACTGACCGATCAGTGTAGGTCTTCCTCGGCTCTATCA GTCGGACCAATCGGTCCGGCTCGGCTTGGTGGTTCGTTTTTGTTTTCAGT GGTCAGTAGTTGGCCATTTTCCCATGAGCCATCGGCCCGTGTTGCCTGTT ATTTTGGCCGTCAGCCCGTTGCCGGCTGGTCGTTACAGCGTTTGTTGATA TTCAGCTGCGGGCTTGTTGGCGGTTGTTGTTGGACTCTTCAAAGGTGCAT GTGAAAGTGTTCTCAGTTGGTCTACCGATGTTTGTTGCTGTTTCTTTCTT CGACTGTCCCGACCGAAATCCTAGCTATTTTGTTAGCGGCTTGTAACGTC TTTCCTTTTCTGGCTCGCTTCACTCTCTCCCCGCGTCACGCTTATATAAA AATAGCGGGCGCGAGCGGCGCTTCATGGACACGTGGTTGGGCAAGCTGCA CGTGGGCCTTGCCGCCGAGTACGGCTTCTACTACAAGCTGCCAGGCGAGG ACTGGCTCTGTATCGGAGAGGACCTGGACCTGTCCTGGAAGGCGGCGGTT CAGCCAATCATGCAGTACTTCACGGAGCGCACGCCTGGCACGTATATCGA GAAGAAGGAGTCTAGCTTGTCATGGCACTACCGGGACGCTGACCCGCATT TTGGGCTGTGGCAGGCAAAGGACATGCAGATCCACATGGAGGACGTCCTC ACCAACCTGCCGCTTGAGATTTTGCAGGTGCGGTGCGGATGTCATTTTCA GGGCGGAGGTTTCCGTGTGTCAGTTGGCGTTAGCGAATGCCATTTCATTG ATGAGAAGGAAGACTTTTGGCTCATGCGAGCTGTATCATGTGTTTAATCA CAGCAGTTAGCGACTCTATCGCTCAATCTCATCTCCCCTTTGGCTCCCCT CATCGTCTTCCGCAGGGCAATCGCATGGTGGAGGTGCGTCATCAGGCGGC GAACAAGTCTGCAGTGGCGGAGCAGCTGTTGCGGCGGTGCGCCGAGCCGC ACATGCTGCACGACCGTGGCGAGGTGGACTTCATCCTCTGCGTCGGCGAC GACAAGTCCGACGAGGACATGTTTCAGACGGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15751:207..1489+

>mRNA_P-wetherbeei_contig15751.1.1 ID=mRNA_P-wetherbeei_contig15751.1.1|Name=mRNA_P-wetherbeei_contig15751.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=663bp|location=Sequence derived from alignment at P-wetherbeei_contig15751:207..1489+ (Phaeothamnion wetherbeei SAG_119_79)
AAACAGGTGGAGGAGGCGTACCGCAAGGCCAAGAATCGTCTGATCATCTC
GGACTACGACGGAACGCTGACACAGCTGCAGTCGCTGCCGCAGCTTGCCG
GGCCGCCGCCCTTCGTAACGCAGCTGCTCGAGAGCCTCACCAAGGACCCC
AAGAACTCCCTCTTCATCATCAGCGGGCGCGAGCGGCGCTTCATGGACAC
GTGGTTGGGCAAGCTGCACGTGGGCCTTGCCGCCGAGTACGGCTTCTACT
ACAAGCTGCCAGGCGAGGACTGGCTCTGTATCGGAGAGGACCTGGACCTG
TCCTGGAAGGCGGCGGTTCAGCCAATCATGCAGTACTTCACGGAGCGCAC
GCCTGGCACGTATATCGAGAAGAAGGAGTCTAGCTTGTCATGGCACTACC
GGGACGCTGACCCGCATTTTGGGCTGTGGCAGGCAAAGGACATGCAGATC
CACATGGAGGACGTCCTCACCAACCTGCCGCTTGAGATTTTGCAGGGCAA
TCGCATGGTGGAGGTGCGTCATCAGGCGGCGAACAAGTCTGCAGTGGCGG
AGCAGCTGTTGCGGCGGTGCGCCGAGCCGCACATGCTGCACGACCGTGGC
GAGGTGGACTTCATCCTCTGCGTCGGCGACGACAAGTCCGACGAGGACAT
GTTTCAGACGGTG
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