mRNA_P-wetherbeei_contig1575.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1575.4.1
Unique NamemRNA_P-wetherbeei_contig1575.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig1575.4.1 vs. uniprot
Match: A0A835ZFL5_9STRA (Potato inhibitor I family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFL5_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 6.400e-8
Identity = 31/63 (49.21%), Postives = 38/63 (60.32%), Query Frame = 3 
Query:  453 RIWMSAVGMTGEDAAAMIREDRPDLREIIIVKAGSMMTMDMRMDRVRIVVNDENKVVHPPHVG 641
            R W   VG TG DAAA +RE RPD + ++IV   +++TMD    RVRI VND   V   P VG
Sbjct:   56 RAWPDLVGKTGADAAAAVREARPDCK-VLIVSVDAIITMDYNEQRVRIFVNDAGVVARTPRVG 117
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BLAST of mRNA_P-wetherbeei_contig1575.4.1 vs. uniprot
Match: A0A818HKR1_9BILA (Hypothetical protein n=2 Tax=Rotaria sordida TaxID=392033 RepID=A0A818HKR1_9BILA)

HSP 1 Score: 57.4 bits (137), Expect = 3.060e-7
Identity = 27/63 (42.86%), Postives = 40/63 (63.49%), Query Frame = 3 
Query:  453 RIWMSAVGMTGEDAAAMIREDRPDLREIIIVKAGSMMTMDMRMDRVRIVVNDENKVVHPPHVG 641
            R W   VG  G +A  +I+ +     ++ IV+  SM+TMD R+DRVR+ V+++ KV HPP VG
Sbjct:    6 RRWPDLVGKNGNEAVEIIKRET-GFTQVHIVQPNSMVTMDYRLDRVRVHVDEQGKVAHPPSVG 67
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BLAST of mRNA_P-wetherbeei_contig1575.4.1 vs. uniprot
Match: A0A813JL18_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JL18_POLGL)

HSP 1 Score: 58.5 bits (140), Expect = 3.610e-7
Identity = 29/63 (46.03%), Postives = 36/63 (57.14%), Query Frame = 3 
Query:  453 RIWMSAVGMTGEDAAAMIREDRPDLREIIIVKAGSMMTMDMRMDRVRIVVNDENKVVHPPHVG 641
            R W   VG  GE A A I+ DRP+L  +  +   SM+TMDMR DRVR+ V    +V   P VG
Sbjct:   49 RNWPELVGQAGEAAVAAIKSDRPELLHVDSLSDDSMVTMDMREDRVRVFVGQNGQVSRAPKVG 111
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BLAST of mRNA_P-wetherbeei_contig1575.4.1 vs. uniprot
Match: M0ZXZ4_SOLTU (Subtilisin inhibitor 1 n=1 Tax=Solanum tuberosum TaxID=4113 RepID=M0ZXZ4_SOLTU)

HSP 1 Score: 57.0 bits (136), Expect = 5.540e-7
Identity = 26/61 (42.62%), Postives = 41/61 (67.21%), Query Frame = 3 
Query:  459 WMSAVGMTGEDAAAMIREDRPDLREIIIVKAGSMMTMDMRMDRVRIVVNDENKVVHPPHVG 641
            W   +G+T E+A   I+E++P+L+ I I+   SM+TMD R+DRVR+ V++  KV   P +G
Sbjct:   19 WPELLGVTAEEAERKIKEEKPELK-IHIIPPNSMVTMDYRLDRVRLFVDESGKVAQEPRLG 78
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BLAST of mRNA_P-wetherbeei_contig1575.4.1 vs. uniprot
Match: M0ZXZ5_SOLTU (Subtilisin inhibitor 1 n=3 Tax=Solanum TaxID=4107 RepID=M0ZXZ5_SOLTU)

HSP 1 Score: 57.0 bits (136), Expect = 8.510e-7
Identity = 26/61 (42.62%), Postives = 41/61 (67.21%), Query Frame = 3 
Query:  459 WMSAVGMTGEDAAAMIREDRPDLREIIIVKAGSMMTMDMRMDRVRIVVNDENKVVHPPHVG 641
            W   +G+T E+A   I+E++P+L+ I I+   SM+TMD R+DRVR+ V++  KV   P +G
Sbjct:   36 WPELLGVTAEEAERKIKEEKPELK-IHIIPPNSMVTMDYRLDRVRLFVDESGKVAQEPRLG 95
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BLAST of mRNA_P-wetherbeei_contig1575.4.1 vs. uniprot
Match: A0A2G3C9G9_CAPCH (Subtilisin-chymotrypsin inhibitor WSCI n=4 Tax=Capsicum TaxID=4071 RepID=A0A2G3C9G9_CAPCH)

HSP 1 Score: 56.2 bits (134), Expect = 1.590e-6
Identity = 27/61 (44.26%), Postives = 41/61 (67.21%), Query Frame = 3 
Query:  459 WMSAVGMTGEDAAAMIREDRPDLREIIIVKAGSMMTMDMRMDRVRIVVNDENKVVHPPHVG 641
            W   +G+T E+A   I+E++P+L+ I IV   SM+TMD R+DRVR+ V++  KV   P +G
Sbjct:   36 WPELLGVTAEEAEKKIKEEKPELK-IDIVPPKSMVTMDYRLDRVRLFVDESGKVAQVPRLG 95
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BLAST of mRNA_P-wetherbeei_contig1575.4.1 vs. uniprot
Match: A0A7S3Z8W6_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z8W6_9EUKA)

HSP 1 Score: 56.6 bits (135), Expect = 2.020e-6
Identity = 29/66 (43.94%), Postives = 38/66 (57.58%), Query Frame = 3 
Query:  459 WMSAVGMTGEDAAAMIREDRPDLREIIIVKAGSMMTMDMRMDRVRIVVND-----ENKVVHPPHVG 641
            W   VG+  E A  +I+ +RPDL ++  V  GS +TMD RMDRVR+ V+D        V   PHVG
Sbjct:   53 WPELVGIDSEKAVQIIKAERPDLTDVHTVPTGSFVTMDYRMDRVRVFVDDPGGTGSGMVKMAPHVG 118
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BLAST of mRNA_P-wetherbeei_contig1575.4.1 vs. uniprot
Match: A0A1S4AE04_TOBAC (subtilisin inhibitor-like n=6 Tax=Nicotiana TaxID=4085 RepID=A0A1S4AE04_TOBAC)

HSP 1 Score: 55.8 bits (133), Expect = 2.230e-6
Identity = 27/61 (44.26%), Postives = 40/61 (65.57%), Query Frame = 3 
Query:  459 WMSAVGMTGEDAAAMIREDRPDLREIIIVKAGSMMTMDMRMDRVRIVVNDENKVVHPPHVG 641
            W   VG+T E+A   I+E++P+L +I I+   SM+TMD R++RVRI V+   KV   P +G
Sbjct:   37 WPELVGVTAEEAEKKIKEEKPEL-DIHIIPPNSMVTMDYRLERVRIFVDASGKVAQEPRLG 96
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BLAST of mRNA_P-wetherbeei_contig1575.4.1 vs. uniprot
Match: A0A7S2U095_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2U095_9EUKA)

HSP 1 Score: 55.8 bits (133), Expect = 3.930e-6
Identity = 28/65 (43.08%), Postives = 42/65 (64.62%), Query Frame = 3 
Query:  459 WMSAVGMTGEDAAAMIREDRPDLREIIIVKAGSMMTMDMRMDRVRIVVNDE---NKVV-HPPHVG 641
            W   VG+  E A  +I+ +RPDL++++ +  GSM+TMD R+DRVR+ V++    N VV   P VG
Sbjct:   56 WPELVGVDAEKAVRIIKSERPDLKKVLSLPIGSMVTMDYRLDRVRVFVSERSGLNSVVAQAPRVG 120
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BLAST of mRNA_P-wetherbeei_contig1575.4.1 vs. uniprot
Match: UPI001BB0E2A6 (subtilisin-chymotrypsin inhibitor-2B-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB0E2A6)

HSP 1 Score: 55.1 bits (131), Expect = 4.260e-6
Identity = 29/61 (47.54%), Postives = 38/61 (62.30%), Query Frame = 3 
Query:  459 WMSAVGMTGEDAAAMIREDRPDLREIIIVKAGSMMTMDMRMDRVRIVVNDENKVVHPPHVG 641
            W   VG TGE+A A+I ++RP L  + I+   SMMT D   DRVRI+V+   KVV  P +G
Sbjct:   38 WAELVGKTGEEAKAVILQERPGLN-VQILPEDSMMTADFCQDRVRILVDGAKKVVKAPSIG 97
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1575.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A835ZFL5_9STRA6.400e-849.21Potato inhibitor I family-domain-containing protei... [more]
A0A818HKR1_9BILA3.060e-742.86Hypothetical protein n=2 Tax=Rotaria sordida TaxID... [more]
A0A813JL18_POLGL3.610e-746.03Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]
M0ZXZ4_SOLTU5.540e-742.62Subtilisin inhibitor 1 n=1 Tax=Solanum tuberosum T... [more]
M0ZXZ5_SOLTU8.510e-742.62Subtilisin inhibitor 1 n=3 Tax=Solanum TaxID=4107 ... [more]
A0A2G3C9G9_CAPCH1.590e-644.26Subtilisin-chymotrypsin inhibitor WSCI n=4 Tax=Cap... [more]
A0A7S3Z8W6_9EUKA2.020e-643.94Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A1S4AE04_TOBAC2.230e-644.26subtilisin inhibitor-like n=6 Tax=Nicotiana TaxID=... [more]
A0A7S2U095_9EUKA3.930e-643.08Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
UPI001BB0E2A64.260e-647.54subtilisin-chymotrypsin inhibitor-2B-like n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1575contigP-wetherbeei_contig1575:3030..4515 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog7668.SPU_017714-tr
PFAMspotato_inhibit
Model size1154
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons3
Evalue4.43e-12
EggNOG OGs2CRMQ@1|root,2R8G2@2759|Eukaryota,3AVAZ@33154|Opisthokonta,3C4GV@33208|Metazoa,3DKWP@33213|Bilateria
Ec32 ortholog descriptionputative serine protease inhibitor
Ec32 orthologEc-26_000240.1
DescriptionPeptidase inhibitor I78 family
Cds size318
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186066.1341426-UTR-P-wetherbeei_contig1575:3029..35391683186066.1341426-UTR-P-wetherbeei_contig1575:3029..3539Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1575 3030..3539 -
1683186066.175223-UTR-P-wetherbeei_contig1575:4035..43301683186066.175223-UTR-P-wetherbeei_contig1575:4035..4330Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1575 4036..4330 -
1683186066.1826158-UTR-P-wetherbeei_contig1575:4484..45151683186066.1826158-UTR-P-wetherbeei_contig1575:4484..4515Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1575 4485..4515 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186066.148396-CDS-P-wetherbeei_contig1575:3539..36321683186066.148396-CDS-P-wetherbeei_contig1575:3539..3632Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1575 3540..3632 -
1683186066.1647177-CDS-P-wetherbeei_contig1575:3810..40351683186066.1647177-CDS-P-wetherbeei_contig1575:3810..4035Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1575 3811..4035 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1575.4.1prot_P-wetherbeei_contig1575.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1575 3540..4035 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1575.4.1

>prot_P-wetherbeei_contig1575.4.1 ID=prot_P-wetherbeei_contig1575.4.1|Name=mRNA_P-wetherbeei_contig1575.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=106bp
MAKLRAEIAKRRAEGPVGQMGPMGPARGIGAATGEFEGGWKNRIWMSAVG
MTGEDAAAMIREDRPDLREIIIVKAGSMMTMDMRMDRVRIVVNDENKVVH
PPHVG*
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mRNA from alignment at P-wetherbeei_contig1575:3030..4515-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1575.4.1 ID=mRNA_P-wetherbeei_contig1575.4.1|Name=mRNA_P-wetherbeei_contig1575.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1486bp|location=Sequence derived from alignment at P-wetherbeei_contig1575:3030..4515- (Phaeothamnion wetherbeei SAG_119_79)
GGAACTCTACACTCTCTTCCACAATTCTGAGGTACAGCATTCCTCTGTCG
TTCACCCCTCCAGTACACCGATCCGCTTCGATGCTTGGTGTCATTTTCCT
TCGAGTTGAGCCGCCCTGCTCTCACTCTCCTCTCTCATCGTTTGATATTT
TTCCGACCTCTTTTTACGTTTTGCTCTCCCTTCAGACATGCGTATCGCAG
CGTTCCTGATGGCTGCTGTGCCACTTGCCGTCTTCGCAGCTGGTGGGTGT
ATCGCAAAGAGCTCCATTTTTAGAAGCTACCTACATCAAGGGCACGGAGT
GCCCCACGACCTTGTGACATTCGAGCTTTGCTTCCTTGACCTTCTGAAGT
TCGGAATCCCTTCTTTCAACCCACCGAAATCGATATTGTTGTCGCTTCCG
GCACAAACTCTTGTGTCCCCCTCATTTTCCCCTTTCGAGCAGACGAGCCG
CCGCAGGAGCAGCAAAACCAAAAGCCTGACATGGCAAAGCTGAGGGCGGA
GATCGCCAAGCGCCGGGCGGAAGGCCCCGTGGGGCAGATGGGGCCGATGG
GGCCCGCAAGGGGCATCGGCGCGGCCACTGGAGAGTTCGAAGGCGGGTGG
AAGAACAGGATCTGGATGTCGGCTGTCGGCATGACGGGCGAGGATGCAGC
GGCGATGATCCGTGAGGACCGGCCTGACCTCAGAGAGATTATCATCGTCA
AGGCGGTGAGTCGCTTCCTTGAACGCTTTCTTCTATGCTTTCTCTTTCTG
TCTTCCTCTCGTTACCGTCGACGTAAAGAAGTTTTGAAACCTCAATACTG
GGTTTTCAGAAGCCGTGGTACGATAGCAGGAACAAGCGTTCCACATTGTG
TTTTCCCCTCCGTTCCTTCCTCCTCCACGGCAGGGCTCGATGATGACCAT
GGACATGCGGATGGATCGCGTCCGTATCGTGGTCAACGACGAGAACAAGG
TGGTACATCCGCCGCACGTCGGCTGAAGGGGAGAAGGAAGAGAAAAGGCA
GAAGTCGCTGAATGGGAGGAATAGGCGGAGGGAGGAAGGACAAAATAGGC
GTCGGAAGGAGAGCCAGGGGAGCGGAGCCTTCCACTGTCCTTTATATGTC
TTTCGGCGGCGCGGGTGCGACGGCAGCAGCGATGGCGGCGATGACGGCAC
CTCCGCAGATGGCCGGCTGCGGCGATGCAGCTTTTGCCGTCCGTCCGGCG
GCTCCGGTGTCGTGTACAGTTGGTAGGTGCGTAATGGCTGAAGCGAGTCC
CGAAAGCTTGGCGGCTGGTGGCCGCGTGTACCGTGAGCCGGGTGGGAATC
GCCCTTTCTAAACGGCTTCCTGCGGTTGGCCTAGATTTTGGTGCAGGAAA
AGGCTCGTTTGTAATAACAGGATTCACTCATGCGCTACACATCCCCACCG
GGCCTGGCCAGGACCTTTACGAGGAAGGTTGTGGAACCATCACGGAGCCG
TAGAATCAAGGCATCATTTCACAGGTCGGATCGGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1575:3030..4515-

>mRNA_P-wetherbeei_contig1575.4.1 ID=mRNA_P-wetherbeei_contig1575.4.1|Name=mRNA_P-wetherbeei_contig1575.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=318bp|location=Sequence derived from alignment at P-wetherbeei_contig1575:3030..4515- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCAAAGCTGAGGGCGGAGATCGCCAAGCGCCGGGCGGAAGGCCCCGT
GGGGCAGATGGGGCCGATGGGGCCCGCAAGGGGCATCGGCGCGGCCACTG
GAGAGTTCGAAGGCGGGTGGAAGAACAGGATCTGGATGTCGGCTGTCGGC
ATGACGGGCGAGGATGCAGCGGCGATGATCCGTGAGGACCGGCCTGACCT
CAGAGAGATTATCATCGTCAAGGCGGGCTCGATGATGACCATGGACATGC
GGATGGATCGCGTCCGTATCGTGGTCAACGACGAGAACAAGGTGGTACAT
CCGCCGCACGTCGGCTGA
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