mRNA_P-wetherbeei_contig15727.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15727.1.1
Unique NamemRNA_P-wetherbeei_contig15727.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15727.1.1 vs. uniprot
Match: D7FWE7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE7_ECTSI)

HSP 1 Score: 269 bits (687), Expect = 8.340e-85
Identity = 135/246 (54.88%), Postives = 180/246 (73.17%), Query Frame = 1
Query:    1 VIHHISELQA---DARLMLAAQFLSRVEALLADPAHRGSSNVKAAAALLSGEQMSADVETLRQRAAECAATLRHWDADDWILSQSVMGVTTSYKKDPNGSLWIKLHGVMDDVPVFDQMATVREVDLYELWVPFCSQAYLLKHIGRVEVLSYLNAALPGLSRDCVLHAYACDCLLEDSCILIQGRSVGAWP-GVELPETKGWFADRMDIHAFRARIELLSPTRASTSLQANIDPKAPVPQALIDFLM 726
            V+  I+E+Q     ARL++A + L+ V+  LA   H G   VK A ALL+GE +    + +RQRAAEC ++L  W + DW+++Q+ MG+TT YK DP+GSLWIK+HG MDDV V DQ+A VREVDL+  WVPFC  + LLK +G VE+L Y + ++PG+ RDCVLHAY CD +LE  CILIQGRSV   P GVE+P+ KGW   RMD+ AFRA+IE+LSPT A TS+ AN+DPKAPVPQ++++F++
Sbjct:   17 VLELIAEVQLCREQARLLVAGRLLAAVDRYLASGQHAGRQEVKEAHALLAGE-LKPLFDEVRQRAAECQSSLDDWQSPDWLVAQTFMGITTFYKVDPDGSLWIKMHGTMDDVTVMDQLAVVREVDLFNKWVPFCDTSKLLKRLGIVELLVYFSMSIPGVGRDCVLHAYGCDSVLETGCILIQGRSVEEVPEGVEVPQVKGWRHARMDVRAFRAKIEVLSPTSARTSIVANVDPKAPVPQSVVNFVV 261          
BLAST of mRNA_P-wetherbeei_contig15727.1.1 vs. uniprot
Match: A0A835ZGQ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGQ3_9STRA)

HSP 1 Score: 242 bits (618), Expect = 2.350e-73
Identity = 123/237 (51.90%), Postives = 164/237 (69.20%), Query Frame = 1
Query:   19 ELQADARLMLAAQFLSRVEALLADPAHRGSSNVKAAAALLSGEQMSADVETLRQRAAECAATLRHWDADDWILSQSVMGVTTSYKKDP-NGSLWIKLHGVMDDVPVFDQMATVREVDLYELWVPFCSQAYLLKHIGRVEVLSYLNAALPGLSRDCVLHAYACDCLLEDSCILIQGRSVGAWPGVELPETKGWFADRMDIHAFRARIELLSPTRASTSLQANIDPKAPVPQALIDFLM 726
            EL  DARL++A   L ++EAL+ D A +  S V+AAA  L  E+ + D  TL+QR+A CA TL  W++ DWI +QS MGV+T YKKDP NG+LW+KL GVM+   V DQ+A VRE+DLY LW+PFCS A +++++GRVE++ +L  ++P   RDCV+HAYACDC+LED CIL+Q  S+  WP                     ARIE+LSPT A TS+ ANIDPKAP+PQ+LI+F+M
Sbjct:   81 ELDRDARLIVAVALLRKIEALVGDAAQQHYSQVQAAALALEREREAWD--TLKQRSAACADTLSDWESPDWIFAQSYMGVSTYYKKDPTNGTLWVKLSGVMEGCNVLDQLAVVREIDLYSLWMPFCSAARVIRYLGRVELIGWLEVSMPAFVRDCVMHAYACDCILEDKCILLQSSSIDEWP---------------------ARIEMLSPTSAGTSMVANIDPKAPLPQSLINFIM 294          
BLAST of mRNA_P-wetherbeei_contig15727.1.1 vs. uniprot
Match: A0A7S1UER4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UER4_9STRA)

HSP 1 Score: 173 bits (439), Expect = 3.350e-49
Identity = 99/254 (38.98%), Postives = 150/254 (59.06%), Query Frame = 1
Query:    1 VIHHISELQADARLMLAAQFLSRVEALLADPAHRGSSNVKAAAALLSGEQMSADVETLRQRAAECAA---TLRHWDADDWILSQSVMGVTTSYKKDPNGSLWIKLHGVMDDVPVFDQMATVREVDLYELWVPFCSQAYLLKHIGRVEVLSYLNAALP--GLSRDCVLHAYACDCLLEDSCILIQGRSVGAWPGVEL-------PETKGWFADRMDIHAFRARIELLSPTRASTSLQANIDPKAPVPQALIDFLM 726
            V+  I  L  D RL++A  FL R++A++     R     +A  A +        +E LR+RAAEC A   +     AD+W  +  + GV T YK DP+G+LWIKL G ++ VP+F+Q+A VRE  L++ W PFC+++ L+  +   E++++ N  +P   +SRD V+HAYACDC+ E+  +L+ G+SV       L       P  K    DRM +  F+A IE+ SPT A T++ AN+DP+  +PQALI+F+M
Sbjct:   39 VLELILYLIDDWRLLVARDFLERLDAVVRTNERR----CRAVRAAMDEPATGQKLEQLRERAAECQAVKDSASEVAADEWTYACKLFGVETRYKPDPDGTLWIKLDGEVEGVPLFEQLAVVRETALFDKWAPFCNKSALVSQLAMCEIVTWFNLNVPLFFISRDAVIHAYACDCVWEEGKVLMVGQSVDEHSAPPLNQGERIPPYKKSLLHDRMIVKGFQAHIEVKSPTTARTTIIANVDPRTVLPQALINFVM 288          
BLAST of mRNA_P-wetherbeei_contig15727.1.1 vs. uniprot
Match: A0A6G0XTN5_9STRA (START domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XTN5_9STRA)

HSP 1 Score: 177 bits (449), Expect = 2.990e-47
Identity = 102/245 (41.63%), Postives = 143/245 (58.37%), Query Frame = 1
Query:   10 HISELQADARLMLAAQFLSRVEALLADPAHRGSSNVKAAAALLSGEQMSADVETLRQ---RAAECAATLRHWDADD---WILSQSVMGVTTSYKKDPNGSLWIKLHGVMDDVPVFDQMATVREVDLYELWVPFCSQAYLLKHIGRVEVLSYLNAALPGLSRDCVLHAYACDCLLEDSCILIQGRSVGA--WPGVELPETKGWFADRMDIHAFRARIELLSPTRASTSLQANIDPKAPVPQALIDF 720
            HI  L  + RL  AA  L +V   L        + ++   A+   E M+A  E LRQ   R  +    L  ++ D    W  +Q+  GV+T +K   +G++WIKL GV +DV VF+ +A +RE DL+ +WVPFC++A LL  + RVE+L+Y+N ALP L RD V+HA+  +   E  CIL+ G+S      P V  P  KGW ADRM + AFRA IE  +  RA T + AN+DPK PVPQ+L++F
Sbjct:  516 HIQYLIDEERLFSAADLLDKVHVFLQTFHATDVNAIRQVDAIR--EAMAAKAEVLRQVQSRRDQGMTALHEFNNDKDAGWRFAQTYFGVSTHWKPGNDGTVWIKLDGVCEDVDVFNSLAVIRETDLFNMWVPFCNKAELLDKLARVEILTYVNLALPFLQRDAVIHAFGINATYEHRCILLLGQSPNEENHPNVTFPPIKGWNADRMQLRAFRALIEPYARNRARTCIVANVDPKCPVPQSLLNF 758          
BLAST of mRNA_P-wetherbeei_contig15727.1.1 vs. uniprot
Match: A0A7S1XYN5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYN5_9STRA)

HSP 1 Score: 173 bits (439), Expect = 1.690e-46
Identity = 99/254 (38.98%), Postives = 150/254 (59.06%), Query Frame = 1
Query:    1 VIHHISELQADARLMLAAQFLSRVEALLADPAHRGSSNVKAAAALLSGEQMSADVETLRQRAAECAA---TLRHWDADDWILSQSVMGVTTSYKKDPNGSLWIKLHGVMDDVPVFDQMATVREVDLYELWVPFCSQAYLLKHIGRVEVLSYLNAALP--GLSRDCVLHAYACDCLLEDSCILIQGRSVGAWPGVEL-------PETKGWFADRMDIHAFRARIELLSPTRASTSLQANIDPKAPVPQALIDFLM 726
            V+  I  L  D RL++A  FL R++A++     R     +A  A +        +E LR+RAAEC A   +     AD+W  +  + GV T YK DP+G+LWIKL G ++ VP+F+Q+A VRE  L++ W PFC+++ L+  +   E++++ N  +P   +SRD V+HAYACDC+ E+  +L+ G+SV       L       P  K    DRM +  F+A IE+ SPT A T++ AN+DP+  +PQALI+F+M
Sbjct:   39 VLELILYLIDDWRLLVARDFLERLDAVVRTNERR----CRAVRAAMDEPATGQKLEQLRERAAECQAVKDSASEVAADEWTYACKLFGVETRYKPDPDGTLWIKLDGEVEGVPLFEQLAVVRETALFDKWAPFCNKSALVSQLAMCEIVTWFNLNVPLFFISRDAVIHAYACDCVWEEGKVLMVGQSVDEHSAPPLNQGERIPPYKKSLLHDRMIVKGFQAHIEVKSPTTARTTIIANVDPRTVLPQALINFVM 288          
BLAST of mRNA_P-wetherbeei_contig15727.1.1 vs. uniprot
Match: A0A3F2RJR6_9STRA (START domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJR6_9STRA)

HSP 1 Score: 174 bits (441), Expect = 3.590e-46
Identity = 94/248 (37.90%), Postives = 146/248 (58.87%), Query Frame = 1
Query:    1 VIHHISELQADARLMLAAQFLSRVEALLADPAHRGSSNVKAAAALLSGEQMSAD-VETLRQRAAECAATLRHWDA----DDWILSQSVMGVTTSYKKDPNGSLWIKLHGVMDDVPVFDQMATVREVDLYELWVPFCSQAYLLKHIGRVEVLSYLNAALPGLSRDCVLHAYACDCLLEDSCILIQGRSV---GAWPGVELPETKGWFADRMDIHAFRARIELLSPTRASTSLQANIDPKAPVPQALIDF 720
            V  H+  L+   R+  AA  + R+EA LAD +      V A   +L       D ++ +++R  +    L+ +      D+W   Q ++GVTTS+K D NGS+WIKL G++D V +F+ ++ +REVDLY +W PFCSQ+ LL+ +G VE+ +YL  + P + RD ++ A+  + + E  C+L+ G SV        V +P  +GW A RM+I  FRA IE ++ T A T + ANIDPK  +P+AL++F
Sbjct:  329 VWEHVRLLKTTERIFSAALLIDRLEAFLADASSTNKIIVAAKTRVLRAMHDERDFIDRIKERRDQGVKALKEFSDKEGDDEWQFGQVMLGVTTSWKPDENGSVWIKLEGIIDGVDIFNTVSVIREVDLYSVWTPFCSQSLLLQSMGYVELAAYLMISSPFMQRDAIIRAFGINAVYESRCLLLLGGSVEESAVTSSVPIPTCQGWNAGRMEIKGFRALIEPVTRTTARTCIVANIDPKCAIPKALLNF 576          
BLAST of mRNA_P-wetherbeei_contig15727.1.1 vs. uniprot
Match: A0A5D6YFF4_9STRA (START domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YFF4_9STRA)

HSP 1 Score: 172 bits (437), Expect = 1.350e-45
Identity = 91/245 (37.14%), Postives = 153/245 (62.45%), Query Frame = 1
Query:   10 HISELQADARLMLAAQFLSRVEA-LLADPAHRGSSNVKAAAALLSGEQMSAD-VETLRQRAAECAATLRHWDAD---DWILSQSVMGVTTSYKKDPNGSLWIKLHGVMDDVPVFDQMATVREVDLYELWVPFCSQAYLLKHIGRVEVLSYLNAALPGLSRDCVLHAYACDCLLEDSCILIQGRSVGAW---PGVELPETKGWFADRMDIHAFRARIELLSPTRASTSLQANIDPKAPVPQALIDF 720
            H+  L+AD R+  AA  + ++EA L+ D +   +    +A  +L+      D V+ +++R A+    LR ++ +   DW   Q+ +GVTT +K   +G++W+KL G+++ V +F+ +A +RE DLY +WVPFC+++ LL+  G V+V++Y++ A P L RD V+ A+  +   E   IL+ G++V      P V+ P+ +GW ADRM++  FRA IE +S TRA   + ANIDPK P+P++L++F
Sbjct:  745 HVHLLKADERIFSAALLIRKLEAFLMRDGSSCATDAAVSAKTILNAMHEERDFVQRVKERNAQGVQALREFNCEADTDWQFGQTYVGVTTHWKPGEDGTVWLKLDGLVEGVDIFNTVAVIRETDLYNVWVPFCNRSLLLQASGHVDVVAYMSVAFPLLQRDAVIQAFGINACYESRAILLLGKTVDEATLAPSVQAPKARGWNADRMEMRGFRALIEPVSRTRARVCIVANIDPKCPIPRSLLNF 989          
BLAST of mRNA_P-wetherbeei_contig15727.1.1 vs. uniprot
Match: A0A329RJB2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RJB2_9STRA)

HSP 1 Score: 170 bits (430), Expect = 1.170e-44
Identity = 97/244 (39.75%), Postives = 150/244 (61.48%), Query Frame = 1
Query:   22 LQADARLMLAAQFLSRVEALLADPAHRGSSNVKAAAALLSGEQMSAD----VETLRQRAAECAATLRHW---DADD-WILSQSVMGVTTSYKKDPNGSLWIKLHGVMDDVPVFDQMATVREVDLYELWVPFCSQAYLLKHIGRVEVLSYLNAALPGLSRDCVLHAYACDCLLEDSCILIQGRSV---GAWPGVELPETKGWFADRMDIHAFRARIELLSPTRASTSLQANIDPKAPVPQALIDF 720
            L+A  R+  AA  ++R+EA LAD    GS+N   AAA     +   D    ++ +++R  +    L+ +   D DD W   Q+++GVTTS+K D +GS+WIKL G++D V VF+ ++ +REVDLY +W PFCSQ+ LL+ +G VE+ +YL  + P L RD ++ A+  + + E+ C+L+ G SV        V +P  +GW A RM+I  FRA IE L+  +A T + ANIDPK  +P+ +++F
Sbjct:  725 LKATERIFSAALLINRLEAFLADT---GSANKIVAAAKTKVLRAMQDEREMIDHIKERRDQGVKALKEFSDKDGDDEWQFGQTMLGVTTSWKPDEDGSVWIKLEGLVDGVDVFNTISVIREVDLYSVWTPFCSQSLLLQAMGHVELAAYLAISSPFLQRDAIIRAFGINAVYENRCLLLLGGSVDVSSVTSAVPVPTLQGWNAGRMEIKGFRALIEPLTRMQARTCIVANIDPKCAIPKPMLNF 965          
BLAST of mRNA_P-wetherbeei_contig15727.1.1 vs. uniprot
Match: A0A225VCB3_9STRA (Transmembrane protein (Fragment) n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225VCB3_9STRA)

HSP 1 Score: 170 bits (430), Expect = 1.170e-44
Identity = 91/236 (38.56%), Postives = 144/236 (61.02%), Query Frame = 1
Query:   37 RLMLAAQFLSRVEALLADPAHRGSSNVKAAAALLSGEQMSAD-VETLRQRAAECAATLRHWDADD----WILSQSVMGVTTSYKKDPNGSLWIKLHGVMDDVPVFDQMATVREVDLYELWVPFCSQAYLLKHIGRVEVLSYLNAALPGLSRDCVLHAYACDCLLEDSCILIQGRSVGA---WPGVELPETKGWFADRMDIHAFRARIELLSPTRASTSLQANIDPKAPVPQALIDF 720
            R+  A   + R+EA LAD      S V A   +L   Q   + +  +++R  +    L+ ++  +    W   Q+++GVTTS+K D +GS+WIKL G++D V +F+ ++ +REVDLY +W PFCSQ+ LL+ +GRVE+ +YL  + P L RD ++ A+  + + E+ C+L+ G SV A      V +P  +GW A RM+I  FRA IE L+  +A T + ANIDPK  +P+A+++F
Sbjct:  738 RIFSAGLLIDRLEAFLADSGSTNKSIVAAKTRILRAMQDEQELINHIKERRDQGVKALKEFNDKEGDGEWQFGQTMLGVTTSWKPDEDGSVWIKLEGLVDGVDIFNTISVIREVDLYSVWTPFCSQSLLLQDMGRVELAAYLAISSPFLQRDTIIKAFGINAVYENRCLLLLGGSVEASSVTTSVPIPTLQGWNAGRMEIKGFRALIEPLTRNQARTCIVANIDPKCAIPKAMLNF 973          
BLAST of mRNA_P-wetherbeei_contig15727.1.1 vs. uniprot
Match: G4YYS4_PHYSP (START domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YYS4_PHYSP)

HSP 1 Score: 169 bits (428), Expect = 2.170e-44
Identity = 96/251 (38.25%), Postives = 151/251 (60.16%), Query Frame = 1
Query:    1 VIHHISELQADARLMLAAQFLSRVEALLADPAHRGSSNVKAAAALLSGEQMSAD----VETLRQRAAECAATLRHWDA----DDWILSQSVMGVTTSYKKDPNGSLWIKLHGVMDDVPVFDQMATVREVDLYELWVPFCSQAYLLKHIGRVEVLSYLNAALPGLSRDCVLHAYACDCLLEDSCILIQGRSVGA---WPGVELPETKGWFADRMDIHAFRARIELLSPTRASTSLQANIDPKAPVPQALIDF 720
            V   +  L+A  R+  AA  + R+EA L D    GS+N   AAA     +   D    ++ +++R  +    L+ +      D+W   Q+++GVTTS+K D +GS+WIKL G++D V +F+ ++ +REVDLY +W PFCSQ+ LL+ +G VE+ +YL  + P L RD ++ A+  + + E+ C+L+ G SV        V +P  +GW A RM+I  FRA IE L+ T+A T + ANIDPK  +P+A+++F
Sbjct:  735 VWQQVQLLKATERIFSAALLIDRLEAFLTDT---GSANKIIAAAKTRVLRAMHDERELIDHIKERRDQGVKALKEFSDKEGDDEWQFGQTMLGVTTSWKPDADGSVWIKLEGLVDGVYIFNTISVIREVDLYSVWTPFCSQSLLLQDMGHVELAAYLAISSPFLQRDAIIRAFGINAVYENRCLLLLGGSVDVSTVTSRVPVPTLQGWNAGRMEIKGFRALIEPLTRTQARTCIVANIDPKCAIPKAMLNF 982          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15727.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWE7_ECTSI8.340e-8554.88Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZGQ3_9STRA2.350e-7351.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1UER4_9STRA3.350e-4938.98Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A6G0XTN5_9STRA2.990e-4741.63START domain-containing protein n=1 Tax=Aphanomyce... [more]
A0A7S1XYN5_9STRA1.690e-4638.98Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A3F2RJR6_9STRA3.590e-4637.90START domain-containing protein n=2 Tax=Phytophtho... [more]
A0A5D6YFF4_9STRA1.350e-4537.14START domain-containing protein n=1 Tax=Pythium br... [more]
A0A329RJB2_9STRA1.170e-4439.75Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A225VCB3_9STRA1.170e-4438.56Transmembrane protein (Fragment) n=2 Tax=Phytophth... [more]
G4YYS4_PHYSP2.170e-4438.25START domain-containing protein n=4 Tax=Phytophtho... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15727contigP-wetherbeei_contig15727:1..1515 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FWE7
Preferred namePCTP
PFAMsSTART
Model size726
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005215,GO:0005319,GO:0005488,GO:0005543,GO:0005548,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006644,GO:0006650,GO:0006656,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008289,GO:0008525,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0010876,GO:0015711,GO:0015748,GO:0015914,GO:0016125,GO:0019637,GO:0031210,GO:0033036,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045017,GO:0046470,GO:0046474,GO:0046486,GO:0050997,GO:0051179,GO:0051234,GO:0070405,GO:0071702,GO:0071704,GO:0090407,GO:0097164,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1902652
Exons5
Evalue1.37e-85
EggNOG OGsKOG2761@1|root,KOG2761@2759|Eukaryota
Ec32 ortholog descriptionSTART-like domain
Ec32 orthologEc-09_003960.1
Descriptionlipid binding
Cds size726
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186065.4028745-CDS-P-wetherbeei_contig15727:0..541683186065.4028745-CDS-P-wetherbeei_contig15727:0..54Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15727 1..54 -
1683186065.4157314-CDS-P-wetherbeei_contig15727:203..4251683186065.4157314-CDS-P-wetherbeei_contig15727:203..425Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15727 204..425 -
1683186065.4249446-CDS-P-wetherbeei_contig15727:793..9131683186065.4249446-CDS-P-wetherbeei_contig15727:793..913Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15727 794..913 -
1683186065.4336865-CDS-P-wetherbeei_contig15727:1059..11341683186065.4336865-CDS-P-wetherbeei_contig15727:1059..1134Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15727 1060..1134 -
1683186065.4429336-CDS-P-wetherbeei_contig15727:1260..15151683186065.4429336-CDS-P-wetherbeei_contig15727:1260..1515Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15727 1261..1515 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15727.1.1prot_P-wetherbeei_contig15727.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15727 1..1515 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15727.1.1

>prot_P-wetherbeei_contig15727.1.1 ID=prot_P-wetherbeei_contig15727.1.1|Name=mRNA_P-wetherbeei_contig15727.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=242bp
VIHHISELQADARLMLAAQFLSRVEALLADPAHRGSSNVKAAAALLSGEQ
MSADVETLRQRAAECAATLRHWDADDWILSQSVMGVTTSYKKDPNGSLWI
KLHGVMDDVPVFDQMATVREVDLYELWVPFCSQAYLLKHIGRVEVLSYLN
AALPGLSRDCVLHAYACDCLLEDSCILIQGRSVGAWPGVELPETKGWFAD
RMDIHAFRARIELLSPTRASTSLQANIDPKAPVPQALIDFLM
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mRNA from alignment at P-wetherbeei_contig15727:1..1515-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15727.1.1 ID=mRNA_P-wetherbeei_contig15727.1.1|Name=mRNA_P-wetherbeei_contig15727.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1515bp|location=Sequence derived from alignment at P-wetherbeei_contig15727:1..1515- (Phaeothamnion wetherbeei SAG_119_79)
GTCATCCACCACATTTCCGAGCTCCAAGCTGACGCCCGCCTTATGCTGGC CGCCCAGTTCCTCTCCCGCGTGGAAGCCCTCCTCGCCGACCCGGCCCACC GCGGCAGCTCGAATGTGAAGGCCGCGGCTGCTCTCTTGAGCGGAGAACAA ATGAGTGCCGATGTGGAAACGCTGCGGCAGCGCGCCGCCGAGTGCGCGGC GACGCTGCGGCACTGGGACGCTGACGACTGGATTTTATCACAGAGCGTCA TGGGCGTAAGTTTTGGGAGGTGGAAGTGGAATGGTTCAAAGAGGGGTGCA GTAGTGGTTTTGACGTCTCAAAGTGCCCTCCCCTATACCGAAGCTGGTGC GAGCGACCCAACTTTGAGTGTTGCTTCGCAGGTCACGACGTCATACAAGA AGGACCCGAACGGGAGCCTCTGGATAAAACTCCACGGCGTAATGGATGAC GTACCGGTAAGAAGAGCTGCCACCTTCTTTTCTTTCTTTCAATCATGTGT AAACTACGTTTCAATAGGGATTGCGAGAGAAGGGAGAACAGCCGTCGCTG AGCTTTCAGCTTTACAACGCCAAAACCACGGTTCACTCCCAAAACCCAGC AGGTGTTCGATCAGATGGCGACGGTGCGAGAGGTGGACCTGTACGAGCTG TGGGTGCCCTTCTGCAGCCAGGCCTACCTCTTAAAGCACATCGGCCGAGT CGAAGTGCTCAGCTACTTGAACGTAAGTCAAGAAGGAAGACGAAGGGTGG AAAGAGGAGCAAAGGCGGAGGCCAGGAAACGGGGGCGGTTTTGGACGGCA GACGGCTTGCTGTTTGCGGAAGGTTGACTTTCCCGAGGCCGGGCTGCCGT TTTGCCCTCCTCTCCGCATGCGTGCTTCATGCTTTTTATACTACTAAATT CCTCTAACTACTGCCTGACTAAATCGAGTGTCACGTTCAGCGTCAAGCCT TGGCGATTGCCCCTTCCTTTGTCCATCTTTGCCGTCTTTTACGCGTTTCC TTCGACTTCAACCCCTTTCTCCTGCTCCGCGCACCCTTTCTCACCACCCA GACTGCCCGCCTGCCGTATTGTCCGCCGTCCTGTCTACAGGCGGCGCTGC CGGGGCTGAGCCGGGATTGCGTCCTCCACGCCTACGCTTGCGACTGCCTG TTGGAAGATTCCTGCATCCTCATCCAGGGCCGCTCCGTCGGCGCCTGGCC GGGGGTGGAGCTTCCCGAGACCAAGGGGTGGTTCGCAGACCGCATGGACA TTCACGCCTTTCGAGCACGGATCGAGCTGCTGTCGCCGACGCGGGCCAGC ACCTCGCTGCAGGTGGGGGGACTGAAAGGAGAGGAGGTGGAGGGGGAGGC GCTGGCATCTTTTCGTTGCGCAAAGCATACAGAGATTTTGGGTGCTGCGC TGCTTTTGACTGCTTTCTACCCACTTTCCCGCACGACTCTGGACCTGTTG CGACTTCACAGGCGAACATTGATCCGAAGGCGCCCGTGCCGCAGGCGCTG ATCGACTTTTTGATG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15727:1..1515-

>mRNA_P-wetherbeei_contig15727.1.1 ID=mRNA_P-wetherbeei_contig15727.1.1|Name=mRNA_P-wetherbeei_contig15727.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=726bp|location=Sequence derived from alignment at P-wetherbeei_contig15727:1..1515- (Phaeothamnion wetherbeei SAG_119_79)
GTCATCCACCACATTTCCGAGCTCCAAGCTGACGCCCGCCTTATGCTGGC
CGCCCAGTTCCTCTCCCGCGTGGAAGCCCTCCTCGCCGACCCGGCCCACC
GCGGCAGCTCGAATGTGAAGGCCGCGGCTGCTCTCTTGAGCGGAGAACAA
ATGAGTGCCGATGTGGAAACGCTGCGGCAGCGCGCCGCCGAGTGCGCGGC
GACGCTGCGGCACTGGGACGCTGACGACTGGATTTTATCACAGAGCGTCA
TGGGCGTCACGACGTCATACAAGAAGGACCCGAACGGGAGCCTCTGGATA
AAACTCCACGGCGTAATGGATGACGTACCGGTGTTCGATCAGATGGCGAC
GGTGCGAGAGGTGGACCTGTACGAGCTGTGGGTGCCCTTCTGCAGCCAGG
CCTACCTCTTAAAGCACATCGGCCGAGTCGAAGTGCTCAGCTACTTGAAC
GCGGCGCTGCCGGGGCTGAGCCGGGATTGCGTCCTCCACGCCTACGCTTG
CGACTGCCTGTTGGAAGATTCCTGCATCCTCATCCAGGGCCGCTCCGTCG
GCGCCTGGCCGGGGGTGGAGCTTCCCGAGACCAAGGGGTGGTTCGCAGAC
CGCATGGACATTCACGCCTTTCGAGCACGGATCGAGCTGCTGTCGCCGAC
GCGGGCCAGCACCTCGCTGCAGGCGAACATTGATCCGAAGGCGCCCGTGC
CGCAGGCGCTGATCGACTTTTTGATG
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