mRNA_P-wetherbeei_contig1569.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1569.1.1 vs. uniprot
Match: A0A835ZCE9_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCE9_9STRA) HSP 1 Score: 198 bits (504), Expect = 5.540e-58 Identity = 107/238 (44.96%), Postives = 151/238 (63.45%), Query Frame = 1
Query: 1 AVMVSAVGADAGKTSVAMAAIAGLTRTYGQGRVAYFKPIGQGLVEV-EGRKFDRDAVLAKAQFSIKAELKHMSPVAVDERFTRRSLDGDVDIEEQWSLIEESFFKLQREHDFVVIEGMGHCAAGSVFGMSNAAVARRLGVGAVLVANGGLGSTFDELELNRQLLEREGVDLRGIVVNKVRVDKYDFIRRSLSRAVAERWGVPLLGCVPYGVGFDRPSLRDLEMLYGRELLSARDHALR 711
A+MV A GKTS+ MA ++ + +G+G V + KP+GQ VE EG + D+DA LA+ F + +++SPV + + +T+ ++G VD QW I F + H+F ++EG GH GSV G+SNA VARRLG+ VL+ GGLGST+DEL LN+QL + GV + G++VNKVR K ++ +S A ++ G PLLG VP+ GFD PS DLE L+G ++LS RD ALR
Sbjct: 7 ALMVVATKQHVGKTSMCMALMSACRQRFGKGNVGFIKPVGQRWVETKEGARIDQDANLARLHFGLSDPPQNLSPVIISQGYTKAYVEGRVDSRAQWERIRRGFEAVVDSHEFTIVEGTGHVGVGSVVGLSNAEVARRLGIPVVLIGTGGLGSTYDELALNKQLCDNLGVRVSGVIVNKVRTSKLPMVQHYMSLA-CQQLGAPLLGIVPHTAGFDSPSCADLEHLFGEKMLSRRDAALR 243
BLAST of mRNA_P-wetherbeei_contig1569.1.1 vs. uniprot
Match: D8LFV3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFV3_ECTSI) HSP 1 Score: 194 bits (494), Expect = 2.190e-56 Identity = 108/243 (44.44%), Postives = 153/243 (62.96%), Query Frame = 1
Query: 1 AVMVSAVGADAGKTSVAMAAIAGLTRTYGQGRVAYFKPIGQGLVEVEGR-----KFDRDAVLAKAQFSIKAELKHMSPVAVDERFTRRSLDGDVDIEEQWSLIEESFFKLQREHDFVVIEGMGHCAAGSVFGMSNAAVARRLGVGAVLVANGGLGSTFDELELNRQLLEREGVDLRGIVVNKVRVDKYDFIRRSLSRAV-AERWGVPLLGCVPYGVGFDRPSLRDLEMLYGRELLSARDHALR 711
A+ V+A GKTSV+MA IAGL R +G RV+Y KP+GQ V V G+ K D+D +AK F + A MSP+ + + +T+ LDG +D+ EQ +I++ F +L R +DFVV+EG GH GSV GM+NA VA LG+ +LV NGGLGST+D + LN+ L GV +R +++NKV+ K D +R + +A+ W P+LG VP+ D+PS+ DLE ++G LS R+H LR
Sbjct: 20 AIFVAATKEHTGKTSVSMALIAGLVRRFGPTRVSYMKPVGQKHVLVTGKDGEDLKVDKDVAVAKEYFGLSAPYNAMSPLVLYKGYTKDFLDGKMDVREQKRVIQDGFEELIRSNDFVVVEGTGHTGVGSVVGMNNADVAGLLGLDVLLVGNGGLGSTYDVMALNKTLCTAGGVRVRAVLLNKVKRGKEDMVREYIGKALRTNSWDAPVLGVVPWAESLDQPSILDLEQMFGTTALSGREHLLR 262
BLAST of mRNA_P-wetherbeei_contig1569.1.1 vs. uniprot
Match: A0A7S0U9F1_HEMAN (Hypothetical protein n=3 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U9F1_HEMAN) HSP 1 Score: 190 bits (483), Expect = 1.230e-54 Identity = 100/242 (41.32%), Postives = 148/242 (61.16%), Query Frame = 1
Query: 1 AVMVSAVGADAGKTSVAMAAIAGLTRTYGQGRVAYFKPIGQGLVEV---EG--RKFDRDAVLAKAQFSIKAELKHMSPVAVDERFTRRSLDGDVDIEEQWSLIEESFFKLQREHDFVVIEGMGHCAAGSVFGMSNAAVARRLGVGAVLVANGGLGSTFDELELNRQLLEREGVDLRGIVVNKVRVDKYDFIRRSLSRAVAERWGVPLLGCVPYGVGFDRPSLRDLEMLYGRELLSARDHALR 711
AVM++A G GKT++++ GL + +G+G+VAY KP+GQ V++ +G K DRD + + F++ +HMSPV +TR+ +DG V ++ S I++ F L + DF ++EG GH GS+ ++NA VA LG+ V++A GGLG +FD+L LN+ LLE+ G LRG+++NKV KYD ++ R + WG PLLGCVPY G RPSL + L E ++ DHA R
Sbjct: 22 AVMLAATGQHTGKTTLSLGVFRGLVKRWGKGKVAYMKPLGQRYVDITLPDGTVHKVDRDVEVVRRTFNLDTPWEHMSPVVFPPGYTRQCIDGKVSSDDLLSKIKDGFTSLATKADFTLLEGSGHMGVGSIANLNNAQVAGALGLEVVVIAPGGLGVSFDQLALNKALLEKHGARLRGVILNKVEPSKYDMVKDYYGRQLQALWGTPLLGCVPYQDGISRPSLNGFKNLLSGEFVAGEDHAFR 263
BLAST of mRNA_P-wetherbeei_contig1569.1.1 vs. uniprot
Match: A0A836C8E0_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8E0_9STRA) HSP 1 Score: 187 bits (475), Expect = 1.890e-53 Identity = 103/234 (44.02%), Postives = 148/234 (63.25%), Query Frame = 1
Query: 7 MVSAVGADAGKTSVAMAAIAGLTRTYGQGRVAYFKPIGQGLVEV-----EGRKFDRDAVLAKAQFSIKAELKHMSPVAVDERFTRRSLDGDVDIEEQWSLIEESFFKLQREHDFVVIEGMGHCAAGSVFGMSNAAVARRLGVGAVLVANGGLGSTFDELELNRQLLEREGVDLRGIVVNKVRVDKYDFIRRSLSRAVAERWGVPLLGCVPYGVGFDRPSLRDLEMLYGRELLSA 693
M++A GKTSV+MA ++GL +G V Y KP+GQ V V E + D+D +A+ + + + MSP+ +D+ +TRR LDG VDI +Q++ I+++F + + V++EG GH GS+ G +NA VA LG+G VLVANGGLGST+DELELNRQ+ +GV + G+++NK DK R++LS A+ WGVPL+G VP D PS+ DLE L+G L+A
Sbjct: 1 MIAATKEHTGKTSVSMALLSGLIARFGVENVGYIKPVGQKWVPVPDDSGEVLQVDKDVKVAREHWGLTCNYRDMSPLVLDKGYTRRYLDGQVDISKQFAAIQQAFDNMLSQKQVVIVEGTGHTGVGSIVGCNNADVAAVLGIGVVLVANGGLGSTYDELELNRQMCMSKGVPVSGVIINKASSDKLAATRKNLSLALRP-WGVPLIGAVPSADSLDVPSVNDLETLFGVRALNA 233
BLAST of mRNA_P-wetherbeei_contig1569.1.1 vs. uniprot
Match: A0A6H5JE31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE31_9PHAE) HSP 1 Score: 187 bits (475), Expect = 2.220e-53 Identity = 104/238 (43.70%), Postives = 149/238 (62.61%), Query Frame = 1
Query: 1 AVMVSAVGADAGKTSVAMAAIAGLTRTYGQGRVAYFKPIGQGLVEVEGRKFDRDAVLAKAQFSIKAELKHMSPVAVDERFTRRSLDGDVDIEEQWSLIEESFFKLQREHDFVVIEGMGHCAAGSVFGMSNAAVARRLGVGAVLVANGGLGSTFDELELNRQLLEREGVDLRGIVVNKVRVDKYDFIRRSLSRAVAER-WGVPLLGCVPYGVGFDRPSLRDLEMLYGRELLSARDHALR 711
A+ V+A GKTSV+MA IAGL R +G RV+Y KP+GQ V V D+D + + F + A MSP+ + + +T+ LDG +D+ EQ +I++ F +L R +DFVV+EG GH GSV GM+NA VA LG+ +LV NGGLGST+D + LN+ L GV +R +++NKV+ K D +R + +A+ W P+LG VP+ D+PS+ DLE ++G LS R+H LR
Sbjct: 68 AIFVAATQEHTGKTSVSMALIAGLVRRFGPTRVSYMKPVGQKHVLV-----DKDVAVVREYFGLSAPYNAMSPLVLYKGYTKDFLDGKMDVREQKRVIQDGFEELIRSNDFVVVEGTGHTGVGSVVGMNNANVAGLLGLDVLLVGNGGLGSTYDVMALNKTLCTAGGVRVRAVLLNKVKRGKEDMVREYIGKALRTNLWDAPVLGVVPWAESLDQPSILDLEQMFGTTALSGREHLLR 300
BLAST of mRNA_P-wetherbeei_contig1569.1.1 vs. uniprot
Match: A0A7S3UT21_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UT21_HETAK) HSP 1 Score: 176 bits (447), Expect = 2.380e-51 Identity = 100/224 (44.64%), Postives = 136/224 (60.71%), Query Frame = 1
Query: 4 VMVSAVGADAGKTSVAMAAIAGLTRTYGQG-----------RVAYFKPIGQGLVEVEGR-KFDRDAVLAKAQFSIKAELKHMSPVAVDERFTRRSLDGDVDIEEQWSLIEESFFKLQREHDFVVIEGMGHCAAGSVFGMSNAAVARRLGVGAVLVANGGLGSTFDELELNRQLLEREGVDLRGIVVNKVRVDKYDFIRRSLSRAVAERWGVPLLGCVPYGVGFD 639
+M++A G AGKTSV+MA +AGL G G RV Y KP+GQ V+V+G K D D AK F + L+ MSPV VD+ TRR L G++ +E W+ IE++F K+++ DF+++EG GH GS G +NA VA RLG+G VLVA GG+G D+L L+R L G +RG+V+NK+ KY+ + L R A RWG+PLLG VP+ D
Sbjct: 16 IMIAATGQHAGKTSVSMALLAGLQDRLGAGEQGRTTAAAMARVGYMKPVGQKYVQVDGGLKVDNDVHTAKMHFKLPFALEDMSPVIVDKGDTRRYLTGEISNDEIWARIEDAFHKMRQSCDFLIVEGTGHSGVGSCIGANNAEVAARLGLGVVLVAGGGVGRPVDDLTLHRAFLAAHGAPVRGVVINKILPSKYEMVASHL-RLAARRWGLPLLGAVPFSDRLD 238
BLAST of mRNA_P-wetherbeei_contig1569.1.1 vs. uniprot
Match: A0A7S4HPI2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HPI2_9STRA) HSP 1 Score: 180 bits (456), Expect = 1.470e-50 Identity = 101/244 (41.39%), Postives = 149/244 (61.07%), Query Frame = 1
Query: 4 VMVSAVGADAGKTSVAMAAIAGLTRTYGQGRVAYFKPIGQGLVEVEGR------KFDRDAVLAKAQFSIK-AELKHMSPVAVDERFTRRSLDGDVDIEEQWSLIEESFFKLQREHDFVVIEGMGHCAAGSVFGMSNAAVARRLGVGAVLVANGGLGSTFDELELNRQLLEREGVDLRGIVVNKVRVDKYDFIRRSLSRAVAERWGVPLLGCVPYGVGFDRPSLRDLEMLYGRELLSARDHALRY 714
+ V+A GKTSV+++ ++GL + + +V + KP+GQ VEVE + D+D L + +F + + +HMSPV + +T++ +DG++ E+Q IE SF ++ D V+ EG GHCA GS+ ++NA VA +G VL+ANGGLGS FDELELNR L E V + G+V+NKV DKY+ + +S+A+ + WGVPLLGCVP P+L DLE L+ EL+ H R+
Sbjct: 27 IFVAATKQHVGKTSVSLSLVSGLQKRFE--KVGFIKPVGQQHVEVESSNLGSTIRVDKDVCLVRERFHLDHIDYQHMSPVIIPRGYTKKYVDGEITYEKQLHDIENSFREVSAASDVVLCEGTGHCAVGSIVDVNNAKVASMIGADMVLIANGGLGSAFDELELNRVLCEHFNVRIAGVVINKVLPDKYEQTKHYMSKALKQAWGVPLLGCVPDRPYLGCPALFDLERLFRAELICGAKHRFRH 268
BLAST of mRNA_P-wetherbeei_contig1569.1.1 vs. uniprot
Match: B8BV89_THAPS (DRTGG domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BV89_THAPS) HSP 1 Score: 179 bits (455), Expect = 1.900e-50 Identity = 101/244 (41.39%), Postives = 147/244 (60.25%), Query Frame = 1
Query: 4 VMVSAVGADAGKTSVAMAAIAGLTRTYGQGRVAYFKPIGQGLVEVEGR------KFDRDAVLAKAQFSIK-AELKHMSPVAVDERFTRRSLDGDVDIEEQWSLIEESFFKLQREHDFVVIEGMGHCAAGSVFGMSNAAVARRLGVGAVLVANGGLGSTFDELELNRQLLEREGVDLRGIVVNKVRVDKYDFIRRSLSRAVAERWGVPLLGCVPYGVGFDRPSLRDLEMLYGRELLSARDHALRY 714
+ V+A GKT+ ++A ++GL + + +V + KP+GQ V V + + D+D L K QF + + +HMSPV + +T++ ++G V +EQ IE SF ++ R D V+IEG GHCA GSV ++NA VA LG +L+ANGGLGS FDELELNR L E+ V + GIV+NKV KYD + +++A + WG+PLLGC+P P+L DLE L+ EL+ H R+
Sbjct: 42 IFVAATKQHVGKTTTSLALMSGLQKRFD--KVGFIKPVGQQHVTVHSQTLDKDIQVDKDICLLKEQFHLDHIDYRHMSPVIIPRGYTKKYIEGKVSYDEQIREIETSFGEVSRASDVVLIEGTGHCAVGSVVNVNNAKVASLLGASMLLIANGGLGSAFDELELNRVLCEKHNVPIAGIVINKVMPAKYDQTKHYMAKAFRDTWGIPLLGCIPDRPFLGCPALADLEKLFHTELVCGESHRFRH 283
BLAST of mRNA_P-wetherbeei_contig1569.1.1 vs. uniprot
Match: L1JYP0_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JYP0_GUITC) HSP 1 Score: 178 bits (451), Expect = 2.050e-50 Identity = 92/237 (38.82%), Postives = 141/237 (59.49%), Query Frame = 1
Query: 4 VMVSAVGADAGKTSVAMAAIAGLTRTYGQGRVAYFKPIGQGLVEV---EGR--KFDRDAVLAKAQFSIKAELKHMSPVAVDERFTRRSLDGDVDIEEQWSLIEESFFKLQREHDFVVIEGMGHCAAGSVFGMSNAAVARRLGVGAVLVANGGLGSTFDELELNRQLLEREGVDLRGIVVNKVRVDKYDFIRRSLSRAVAERWGVPLLGCVPYGVGFDRPSLRDLEMLYGRELLSARD 699
VM++A G GKT++++ GL + YG+GRVAY KP+GQ + +GR K D D + + F + +HMSPV FTR+ +DG++ E I+++F L DF ++EG GH GS+ ++NA VA LG+ V++A GGLGS+FD+L LN+ LLE+ G LRG++VNKV+ +K+D ++ R ++ W PLLGC+PY +PS+ L L++ +
Sbjct: 23 VMLAATGMHVGKTTLSLGVFKGLEKRYGKGRVAYCKPLGQRFKNISLDDGRVVKVDPDVEVLRNYFKLNLSWEHMSPVVFPSGFTRKVIDGEIHTAELLHKIKDAFTSLATSSDFTLVEGSGHMGVGSIVNLNNAQVAGALGLDVVIIAPGGLGSSFDQLALNKSLLEKHGARLRGVIVNKVQPEKFDMVKDYYGRVLSSLWDTPLLGCIPYYEAISKPSMIGFAQLLNSNLVAGEE 259
BLAST of mRNA_P-wetherbeei_contig1569.1.1 vs. uniprot
Match: A0A7R9U109_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U109_9STRA) HSP 1 Score: 178 bits (452), Expect = 2.920e-50 Identity = 105/245 (42.86%), Postives = 147/245 (60.00%), Query Frame = 1
Query: 34 GKTSVAMAAIAGLTRTYGQGR-VAYFKPIGQGLVEVEGRKFDRDAVLAKAQFSIKAELKHMSPVAVDERFTRRSLDGDVDIEEQWSLIEESFFKLQREHDFVVIEGMGHCAAGSVFGMSNAAVARRLGVGAVLVANGGLGSTFDELELNRQLLEREGVDLRGIVVNKVRVDKYDFIRRSLSRAVAERWGVPLLGCVPYGVGFDRPSLRDLEMLYGRELLSARDHALRYV----VALGYSGLHSFV 753
GKTSV+M + GL R + + VA+ KP+GQ ++++G K D+D + K F + + + MSPV V +TR +DG ++Q I SF L R+ D VV+EG GH GS+ M+NA VA LG +L+ANGGLGS FDELELNR + + GV + G+V+NKV D+ + IR +S+ + ERW VPLLG VP +PSL D E L+ LLS + H LR+ + L GL+ F+
Sbjct: 31 GKTSVSMGFVQGLKRRFRRPESVAFGKPVGQQHLQIDGMKVDKDVQVLKEHFGLTCKYQDMSPVLVPRGYTRDFIDGKRSEKDQEDAILRSFEALSRDSDVVVMEGTGHTGVGSIVNMNNAKVASMLGAEMILIANGGLGSAFDELELNRCMCKEYGVKISGVVINKVLPDRVEMIRHYVSKLL-ERWDVPLLGVVPDESFLGKPSLLDFERLFDVSLLSGQKHRLRHYNPSDIHLAAHGLNRFI 274 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1569.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1569.1.1 >prot_P-wetherbeei_contig1569.1.1 ID=prot_P-wetherbeei_contig1569.1.1|Name=mRNA_P-wetherbeei_contig1569.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=255bp MVSAVGADAGKTSVAMAAIAGLTRTYGQGRVAYFKPIGQGLVEVEGRKFDback to top mRNA from alignment at P-wetherbeei_contig1569:1070..2344- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1569.1.1 ID=mRNA_P-wetherbeei_contig1569.1.1|Name=mRNA_P-wetherbeei_contig1569.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1275bp|location=Sequence derived from alignment at P-wetherbeei_contig1569:1070..2344- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1569:1070..2344- >mRNA_P-wetherbeei_contig1569.1.1 ID=mRNA_P-wetherbeei_contig1569.1.1|Name=mRNA_P-wetherbeei_contig1569.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=765bp|location=Sequence derived from alignment at P-wetherbeei_contig1569:1070..2344- (Phaeothamnion wetherbeei SAG_119_79)back to top |