mRNA_P-wetherbeei_contig1566.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1566.6.1
Unique NamemRNA_P-wetherbeei_contig1566.6.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1566.6.1 vs. uniprot
Match: A0A3C0TYW5_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TYW5_9PROT)

HSP 1 Score: 207 bits (527), Expect = 1.130e-66
Identity = 107/132 (81.06%), Postives = 119/132 (90.15%), Query Frame = 1
Query:    1 MSNGIIPVSTLYIGLNALLNLVLAILVVRARIKTETNIGDGGKEEMIKAQRVHGNNVEYVPITLLVLIAVEMAAAPVWLVHALGAGLTVTRAAHALGLSSSTGRTAGRFLGTLGTWVVLLVGSIACIYYGLN 396
            +SNGIIP+STLYIG+N LLNL+LAILVVRAR+KT   IGDGGK E+I+AQRV GNNVEYVP  LLVLIAVEMAAAPVW+VH LGAGL+V+RAAHA GLS STGR+AGRFLGTLGTW+VLLVG IACIYYGL 
Sbjct:   18 LSNGIIPISTLYIGINVLLNLILAILVVRARVKTGVEIGDGGKNELIQAQRVQGNNVEYVPFGLLVLIAVEMAAAPVWMVHTLGAGLSVSRAAHAFGLSQSTGRSAGRFLGTLGTWLVLLVGGIACIYYGLR 149          
BLAST of mRNA_P-wetherbeei_contig1566.6.1 vs. uniprot
Match: A0A351T3R6_9PROT (Uncharacterized protein n=5 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A351T3R6_9PROT)

HSP 1 Score: 160 bits (406), Expect = 2.380e-48
Identity = 85/132 (64.39%), Postives = 102/132 (77.27%), Query Frame = 1
Query:    1 MSNGIIPVSTLYIGLNALLNLVLAILVVRARIKTETNIGDGGKEEMIKAQRVHGNNVEYVPITLLVLIAVEMAAAPVWLVHALGAGLTVTRAAHALGLSSSTGRTAGRFLGTLGTWVVLLVGSIACIYYGLN 396
            M  G I VSTLYIGLN LL+LVLAILVVRAR KT T IG+G  +EM++A RVHGNNVEYVP  L+ LIAVE+A AP+W +H LGAGLTV R AHA+GLS S+GR+ GR +GT+ TW+V+LV     +YY L 
Sbjct:   11 MGGGPIAVSTLYIGLNVLLSLVLAILVVRARFKTGTEIGEGDSDEMLRATRVHGNNVEYVPFALIALIAVELAGAPLWCLHTLGAGLTVGRLAHAVGLSGSSGRSVGRLVGTILTWLVMLVAGGLSVYYALT 142          
BLAST of mRNA_P-wetherbeei_contig1566.6.1 vs. uniprot
Match: A0A8D6ARN2_9PROT (Inner membrane protein YecN n=1 Tax=Alphaproteobacteria bacterium SO-S41 TaxID=2829083 RepID=A0A8D6ARN2_9PROT)

HSP 1 Score: 106 bits (265), Expect = 4.580e-27
Identity = 54/121 (44.63%), Postives = 82/121 (67.77%), Query Frame = 1
Query:   31 LYIGLNALLNLVLAILVVRARIKTETNIGDGGKEEMIKAQRVHGNNVEYVPITLLVLIAVEMAAAPVWLVHALGAGLTVTRAAHALGLSSSTGRTAGRFLGTLGTWVVLLVGSIACIYYGL 393
            LY G+NAL+ L+L++ V RAR   + +IGDGG   +++AQR HGN  EY+PI L++++A+    A   L+HA+G  LT  R  H +GL++S+  + GR LG + TW  L+ G++AC+YY L
Sbjct:   11 LYAGINALILLLLSLWVTRARRSHKVSIGDGGNPALLRAQRAHGNAAEYIPIVLVLMLALAGLKASSLLLHAIGLALTFGRILHGIGLNTSSNLSVGRALGMVLTWAALITGAVACLYYAL 131          
BLAST of mRNA_P-wetherbeei_contig1566.6.1 vs. uniprot
Match: A0A399RHU2_9PROT (Glutathione S-transferase n=1 Tax=Henriciella mobilis TaxID=2305467 RepID=A0A399RHU2_9PROT)

HSP 1 Score: 104 bits (260), Expect = 2.400e-26
Identity = 62/124 (50.00%), Postives = 81/124 (65.32%), Query Frame = 1
Query:   16 IPVSTLYIGLNALLNLVLAILVVRARIKTETNIGDGGKEEMIKAQRVHGNNVEYVPITLLVLIAVEMAAAPVWLVHALGAGLTVTRAAHALGLSSSTGRTAGRFLGTLGTWVVLLVGSIACIYY 387
            I  + LY  L  LL L L + V R R K +   GDGGKE + +AQRV GN VE VP+TL+ L+ + + +APVWLVHALGA L + R  HA+GL  S+G + GR  GTL + VV+L   IAC++Y
Sbjct:    4 IEAAVLYTALCLLLMLALKMNVGRVRAKEKVMFGDGGKEPVQRAQRVQGNAVEDVPVTLVGLVGLALLSAPVWLVHALGATLFLARVLHAVGLGGSSGGSPGRMWGTLLSLVVMLATVIACLWY 127          
BLAST of mRNA_P-wetherbeei_contig1566.6.1 vs. uniprot
Match: A0A8I1UKS5_9PROT (MAPEG family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A8I1UKS5_9PROT)

HSP 1 Score: 104 bits (259), Expect = 4.760e-26
Identity = 53/117 (45.30%), Postives = 74/117 (63.25%), Query Frame = 1
Query:   34 YIGLNALLNLVLAILVVRARIKTETNIGDGGKEEMIKAQRVHGNNVEYVPITLLVLIAVEMAAAPVWLVHALGAGLTVTRAAHALGLSSSTGRTAGRFLGTLGTWVVLLVGSIACIY 384
            Y  +NAL+ L+LA+LV RAR+K +  IGDGGK EM    R H NN EYVP  LL++ A+      VW+VH +G  LT+ R  H  GLS   G ++ RFLG + TW+  +VG ++ ++
Sbjct:   16 YTAINALIMLILALLVTRARVKNQVEIGDGGKPEMTGPLRAHANNTEYVPTALLLMWALLPIGGSVWMVHGIGLPLTIGRLLHGFGLSRGIGTSSPRFLGVMLTWIAYIVGIVSLLW 132          
BLAST of mRNA_P-wetherbeei_contig1566.6.1 vs. uniprot
Match: A0A7Y7CSV8_9GAMM (MAPEG family protein n=1 Tax=Oceanospirillaceae bacterium TaxID=1899355 RepID=A0A7Y7CSV8_9GAMM)

HSP 1 Score: 102 bits (253), Expect = 2.990e-25
Identity = 53/120 (44.17%), Postives = 80/120 (66.67%), Query Frame = 1
Query:   22 VSTLYIGLNALLNLVLAILVVRARIKTETNIGDGGKEEMIKAQRVHGNNVEYVPITLLVLIAVEMAAAPVWLVHALGAGLTVTRAAHALGLSSSTGRTAGRFLGTLGTWVVLLVGSIACI 381
            ++TLY GLN LL + LA+ VV  R +    IGDGG  E+++A R HGN +EYVP+TL++++ +E+ A     +HA+GA L + R  HA GL  ++G + GRFLGTL TW + +  ++ C+
Sbjct:   10 ITTLYTGLNTLLIIALAMYVVVLRYRHRVGIGDGGVPELLRAIRAHGNALEYVPLTLIMMLVLELNAVADTHLHAIGAVLLIGRLLHAWGLVRTSGTSPGRFLGTLSTWGIFIYAAVLCV 129          
BLAST of mRNA_P-wetherbeei_contig1566.6.1 vs. uniprot
Match: A0A062U8W4_9PROT (Uncharacterized protein n=1 Tax=Hyphomonas pacifica TaxID=1280941 RepID=A0A062U8W4_9PROT)

HSP 1 Score: 100 bits (250), Expect = 8.500e-25
Identity = 59/119 (49.58%), Postives = 78/119 (65.55%), Query Frame = 1
Query:   25 STLYIGLNALLNLVLAILVVRARIKTETNIGDGGKEEMIKAQRVHGNNVEYVPITLLVLIAVEMAAAPVWLVHALGAGLTVTRAAHALGLSSSTGRTAGRFLGTLGTWVVLLVGSIACI 381
            +TLY+GL ALL LVL   V R R+K +   GDGG E + +A RV GN VE VP+ L+ L+A+   AAPVW+VHALGA   V R  HA+GL  S G + GR +GTL + + LL+ +  C+
Sbjct:    7 ATLYVGLFALLMLVLKANVGRVRVKEKVMFGDGGNEALQRAIRVQGNAVEDVPVVLIGLVALGAMAAPVWVVHALGAAFLVGRILHAVGLGGSAGSSMGRMVGTLLSAIALLLTAGVCV 125          
BLAST of mRNA_P-wetherbeei_contig1566.6.1 vs. uniprot
Match: UPI00140E42FE (MAPEG family protein n=1 Tax=Thioalkalivibrio sp. XN279 TaxID=2714953 RepID=UPI00140E42FE)

HSP 1 Score: 99.4 bits (246), Expect = 3.060e-24
Identity = 57/124 (45.97%), Postives = 79/124 (63.71%), Query Frame = 1
Query:   22 VSTLYIGLNALLNLVLAILVVRARIKTETNIGDGGKEEMIKAQRVHGNNVEYVPITLLVLIAVEMAAAPVWLVHALGAGLTVTRAAHALGLSSSTGRTAGRFLGTLGTWVVLLVGSIACIYYGL 393
            ++  Y GL  LL LVL   VV  R + +  +G GG  ++ +A RVHGN  EYVP+ L++L+  E+  AP WL+H LGAG  + RAAHA GLS S G + GRF GTL TW+ LL+ ++  ++  L
Sbjct:    5 ITAFYGGLLGLLFLVLCWQVVDHRRRGKVGLGTGGNMDLERAVRVHGNFAEYVPLFLVLLLLAELGGAPGWLLHVLGAGFLLGRAAHAWGLSKSGGTSPGRFYGTLFTWIALLLVALLNLWLAL 128          
BLAST of mRNA_P-wetherbeei_contig1566.6.1 vs. uniprot
Match: A0A845QE11_9HYPH (Glutathione S-transferase n=1 Tax=Pyruvatibacter mobilis TaxID=1712261 RepID=A0A845QE11_9HYPH)

HSP 1 Score: 99.0 bits (245), Expect = 4.460e-24
Identity = 60/118 (50.85%), Postives = 79/118 (66.95%), Query Frame = 1
Query:   31 LYIGLNALLNLVLAILVVRARIKTETNIGDGGKEEMIKAQRVHGNNVEYVPITLLVLIAVEMAAAPVWLVHALGAGLTVTRAAHALGLSSSTGRTAGRFLGTLGTWVVLLVGSIACIY 384
            LYIG+N LL LVLAILVVR R K   ++GDGG  ++ +A R HGNNVEYV I L  LIA+ +  A + L+HA G  +TV R AHA+G+S+  G +  R LGTL TW+   V  + C++
Sbjct:   11 LYIGINLLLTLVLAILVVRQRAKHSVSLGDGGNADVERAIRAHGNNVEYVAIALPGLIALGLLGASLTLLHAAGLLVTVGRVAHAIGISN--GISIFRQLGTLATWIGAAVLGVGCLW 126          
BLAST of mRNA_P-wetherbeei_contig1566.6.1 vs. uniprot
Match: A0A062TYK5_9PROT (Uncharacterized protein n=1 Tax=Hyphomonas beringensis TaxID=1280946 RepID=A0A062TYK5_9PROT)

HSP 1 Score: 99.0 bits (245), Expect = 4.840e-24
Identity = 59/119 (49.58%), Postives = 77/119 (64.71%), Query Frame = 1
Query:   25 STLYIGLNALLNLVLAILVVRARIKTETNIGDGGKEEMIKAQRVHGNNVEYVPITLLVLIAVEMAAAPVWLVHALGAGLTVTRAAHALGLSSSTGRTAGRFLGTLGTWVVLLVGSIACI 381
            +TLY+GL ALL LVL   V R R K +   GDG  + M++A RV GN VE VPI L+ L+A+   AAPVW VH LGA   + R  HA+GL  S+G + GR +GTL + VVLL+ +  C+
Sbjct:    7 ATLYVGLFALLMLVLKANVARVRAKEKVMFGDGDNDAMLRAIRVQGNAVEDVPIVLIGLVALGAMAAPVWAVHGLGAAFLLGRVLHAVGLGGSSGSSMGRMVGTLLSAVVLLLTAGLCV 125          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1566.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TYW5_9PROT1.130e-6681.06Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A351T3R6_9PROT2.380e-4864.39Uncharacterized protein n=5 Tax=Alphaproteobacteri... [more]
A0A8D6ARN2_9PROT4.580e-2744.63Inner membrane protein YecN n=1 Tax=Alphaproteobac... [more]
A0A399RHU2_9PROT2.400e-2650.00Glutathione S-transferase n=1 Tax=Henriciella mobi... [more]
A0A8I1UKS5_9PROT4.760e-2645.30MAPEG family protein n=1 Tax=Alphaproteobacteria b... [more]
A0A7Y7CSV8_9GAMM2.990e-2544.17MAPEG family protein n=1 Tax=Oceanospirillaceae ba... [more]
A0A062U8W4_9PROT8.500e-2549.58Uncharacterized protein n=1 Tax=Hyphomonas pacific... [more]
UPI00140E42FE3.060e-2445.97MAPEG family protein n=1 Tax=Thioalkalivibrio sp. ... [more]
A0A845QE11_9HYPH4.460e-2450.85Glutathione S-transferase n=1 Tax=Pyruvatibacter m... [more]
A0A062TYK5_9PROT4.840e-2449.58Uncharacterized protein n=1 Tax=Hyphomonas beringe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1566contigP-wetherbeei_contig1566:6080..6478 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1280941.HY2_00660
PFAMsMAPEG
Model size399
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K07136
Hectar predicted targeting categorysignal peptide
Exons1
Evalue1.39e-25
EggNOG OGsCOG3788@1|root,COG3788@2|Bacteria,1N0G5@1224|Proteobacteria,2UDEJ@28211|Alphaproteobacteria,440MQ@69657|Hyphomonadaceae
DescriptionMAPEG family
Cds size399
COG categoryS
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186063.5087683-CDS-P-wetherbeei_contig1566:6079..64781683186063.5087683-CDS-P-wetherbeei_contig1566:6079..6478Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1566 6080..6478 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1566.6.1prot_P-wetherbeei_contig1566.6.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1566 6080..6478 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1566.6.1

>prot_P-wetherbeei_contig1566.6.1 ID=prot_P-wetherbeei_contig1566.6.1|Name=mRNA_P-wetherbeei_contig1566.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=133bp
MSNGIIPVSTLYIGLNALLNLVLAILVVRARIKTETNIGDGGKEEMIKAQ
RVHGNNVEYVPITLLVLIAVEMAAAPVWLVHALGAGLTVTRAAHALGLSS
STGRTAGRFLGTLGTWVVLLVGSIACIYYGLN*
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mRNA from alignment at P-wetherbeei_contig1566:6080..6478-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1566.6.1 ID=mRNA_P-wetherbeei_contig1566.6.1|Name=mRNA_P-wetherbeei_contig1566.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=399bp|location=Sequence derived from alignment at P-wetherbeei_contig1566:6080..6478- (Phaeothamnion wetherbeei SAG_119_79)
ATGAGTAACGGGATTATCCCGGTTTCGACGCTGTATATTGGCCTTAATGC GCTGCTGAATTTGGTTCTGGCAATTCTGGTCGTGCGGGCCAGGATAAAGA CCGAAACCAATATCGGCGATGGCGGCAAGGAAGAGATGATCAAGGCCCAG CGTGTGCATGGCAATAATGTGGAATATGTGCCGATTACCCTGCTGGTGCT GATCGCAGTGGAAATGGCGGCGGCGCCCGTATGGCTCGTGCATGCGCTGG GCGCCGGATTGACCGTCACCCGTGCGGCACATGCATTGGGCCTGTCTTCC TCTACGGGCCGCACGGCGGGGCGGTTTCTTGGAACCCTCGGCACATGGGT TGTCCTGCTGGTGGGCAGTATAGCCTGTATTTACTATGGGCTGAATTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1566:6080..6478-

>mRNA_P-wetherbeei_contig1566.6.1 ID=mRNA_P-wetherbeei_contig1566.6.1|Name=mRNA_P-wetherbeei_contig1566.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=399bp|location=Sequence derived from alignment at P-wetherbeei_contig1566:6080..6478- (Phaeothamnion wetherbeei SAG_119_79)
ATGAGTAACGGGATTATCCCGGTTTCGACGCTGTATATTGGCCTTAATGC
GCTGCTGAATTTGGTTCTGGCAATTCTGGTCGTGCGGGCCAGGATAAAGA
CCGAAACCAATATCGGCGATGGCGGCAAGGAAGAGATGATCAAGGCCCAG
CGTGTGCATGGCAATAATGTGGAATATGTGCCGATTACCCTGCTGGTGCT
GATCGCAGTGGAAATGGCGGCGGCGCCCGTATGGCTCGTGCATGCGCTGG
GCGCCGGATTGACCGTCACCCGTGCGGCACATGCATTGGGCCTGTCTTCC
TCTACGGGCCGCACGGCGGGGCGGTTTCTTGGAACCCTCGGCACATGGGT
TGTCCTGCTGGTGGGCAGTATAGCCTGTATTTACTATGGGCTGAATTGA
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