mRNA_P-wetherbeei_contig1566.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1566.6.1 vs. uniprot
Match: A0A3C0TYW5_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TYW5_9PROT) HSP 1 Score: 207 bits (527), Expect = 1.130e-66 Identity = 107/132 (81.06%), Postives = 119/132 (90.15%), Query Frame = 1
Query: 1 MSNGIIPVSTLYIGLNALLNLVLAILVVRARIKTETNIGDGGKEEMIKAQRVHGNNVEYVPITLLVLIAVEMAAAPVWLVHALGAGLTVTRAAHALGLSSSTGRTAGRFLGTLGTWVVLLVGSIACIYYGLN 396
+SNGIIP+STLYIG+N LLNL+LAILVVRAR+KT IGDGGK E+I+AQRV GNNVEYVP LLVLIAVEMAAAPVW+VH LGAGL+V+RAAHA GLS STGR+AGRFLGTLGTW+VLLVG IACIYYGL
Sbjct: 18 LSNGIIPISTLYIGINVLLNLILAILVVRARVKTGVEIGDGGKNELIQAQRVQGNNVEYVPFGLLVLIAVEMAAAPVWMVHTLGAGLSVSRAAHAFGLSQSTGRSAGRFLGTLGTWLVLLVGGIACIYYGLR 149
BLAST of mRNA_P-wetherbeei_contig1566.6.1 vs. uniprot
Match: A0A351T3R6_9PROT (Uncharacterized protein n=5 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A351T3R6_9PROT) HSP 1 Score: 160 bits (406), Expect = 2.380e-48 Identity = 85/132 (64.39%), Postives = 102/132 (77.27%), Query Frame = 1
Query: 1 MSNGIIPVSTLYIGLNALLNLVLAILVVRARIKTETNIGDGGKEEMIKAQRVHGNNVEYVPITLLVLIAVEMAAAPVWLVHALGAGLTVTRAAHALGLSSSTGRTAGRFLGTLGTWVVLLVGSIACIYYGLN 396
M G I VSTLYIGLN LL+LVLAILVVRAR KT T IG+G +EM++A RVHGNNVEYVP L+ LIAVE+A AP+W +H LGAGLTV R AHA+GLS S+GR+ GR +GT+ TW+V+LV +YY L
Sbjct: 11 MGGGPIAVSTLYIGLNVLLSLVLAILVVRARFKTGTEIGEGDSDEMLRATRVHGNNVEYVPFALIALIAVELAGAPLWCLHTLGAGLTVGRLAHAVGLSGSSGRSVGRLVGTILTWLVMLVAGGLSVYYALT 142
BLAST of mRNA_P-wetherbeei_contig1566.6.1 vs. uniprot
Match: A0A8D6ARN2_9PROT (Inner membrane protein YecN n=1 Tax=Alphaproteobacteria bacterium SO-S41 TaxID=2829083 RepID=A0A8D6ARN2_9PROT) HSP 1 Score: 106 bits (265), Expect = 4.580e-27 Identity = 54/121 (44.63%), Postives = 82/121 (67.77%), Query Frame = 1
Query: 31 LYIGLNALLNLVLAILVVRARIKTETNIGDGGKEEMIKAQRVHGNNVEYVPITLLVLIAVEMAAAPVWLVHALGAGLTVTRAAHALGLSSSTGRTAGRFLGTLGTWVVLLVGSIACIYYGL 393
LY G+NAL+ L+L++ V RAR + +IGDGG +++AQR HGN EY+PI L++++A+ A L+HA+G LT R H +GL++S+ + GR LG + TW L+ G++AC+YY L
Sbjct: 11 LYAGINALILLLLSLWVTRARRSHKVSIGDGGNPALLRAQRAHGNAAEYIPIVLVLMLALAGLKASSLLLHAIGLALTFGRILHGIGLNTSSNLSVGRALGMVLTWAALITGAVACLYYAL 131
BLAST of mRNA_P-wetherbeei_contig1566.6.1 vs. uniprot
Match: A0A399RHU2_9PROT (Glutathione S-transferase n=1 Tax=Henriciella mobilis TaxID=2305467 RepID=A0A399RHU2_9PROT) HSP 1 Score: 104 bits (260), Expect = 2.400e-26 Identity = 62/124 (50.00%), Postives = 81/124 (65.32%), Query Frame = 1
Query: 16 IPVSTLYIGLNALLNLVLAILVVRARIKTETNIGDGGKEEMIKAQRVHGNNVEYVPITLLVLIAVEMAAAPVWLVHALGAGLTVTRAAHALGLSSSTGRTAGRFLGTLGTWVVLLVGSIACIYY 387
I + LY L LL L L + V R R K + GDGGKE + +AQRV GN VE VP+TL+ L+ + + +APVWLVHALGA L + R HA+GL S+G + GR GTL + VV+L IAC++Y
Sbjct: 4 IEAAVLYTALCLLLMLALKMNVGRVRAKEKVMFGDGGKEPVQRAQRVQGNAVEDVPVTLVGLVGLALLSAPVWLVHALGATLFLARVLHAVGLGGSSGGSPGRMWGTLLSLVVMLATVIACLWY 127
BLAST of mRNA_P-wetherbeei_contig1566.6.1 vs. uniprot
Match: A0A8I1UKS5_9PROT (MAPEG family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A8I1UKS5_9PROT) HSP 1 Score: 104 bits (259), Expect = 4.760e-26 Identity = 53/117 (45.30%), Postives = 74/117 (63.25%), Query Frame = 1
Query: 34 YIGLNALLNLVLAILVVRARIKTETNIGDGGKEEMIKAQRVHGNNVEYVPITLLVLIAVEMAAAPVWLVHALGAGLTVTRAAHALGLSSSTGRTAGRFLGTLGTWVVLLVGSIACIY 384
Y +NAL+ L+LA+LV RAR+K + IGDGGK EM R H NN EYVP LL++ A+ VW+VH +G LT+ R H GLS G ++ RFLG + TW+ +VG ++ ++
Sbjct: 16 YTAINALIMLILALLVTRARVKNQVEIGDGGKPEMTGPLRAHANNTEYVPTALLLMWALLPIGGSVWMVHGIGLPLTIGRLLHGFGLSRGIGTSSPRFLGVMLTWIAYIVGIVSLLW 132
BLAST of mRNA_P-wetherbeei_contig1566.6.1 vs. uniprot
Match: A0A7Y7CSV8_9GAMM (MAPEG family protein n=1 Tax=Oceanospirillaceae bacterium TaxID=1899355 RepID=A0A7Y7CSV8_9GAMM) HSP 1 Score: 102 bits (253), Expect = 2.990e-25 Identity = 53/120 (44.17%), Postives = 80/120 (66.67%), Query Frame = 1
Query: 22 VSTLYIGLNALLNLVLAILVVRARIKTETNIGDGGKEEMIKAQRVHGNNVEYVPITLLVLIAVEMAAAPVWLVHALGAGLTVTRAAHALGLSSSTGRTAGRFLGTLGTWVVLLVGSIACI 381
++TLY GLN LL + LA+ VV R + IGDGG E+++A R HGN +EYVP+TL++++ +E+ A +HA+GA L + R HA GL ++G + GRFLGTL TW + + ++ C+
Sbjct: 10 ITTLYTGLNTLLIIALAMYVVVLRYRHRVGIGDGGVPELLRAIRAHGNALEYVPLTLIMMLVLELNAVADTHLHAIGAVLLIGRLLHAWGLVRTSGTSPGRFLGTLSTWGIFIYAAVLCV 129
BLAST of mRNA_P-wetherbeei_contig1566.6.1 vs. uniprot
Match: A0A062U8W4_9PROT (Uncharacterized protein n=1 Tax=Hyphomonas pacifica TaxID=1280941 RepID=A0A062U8W4_9PROT) HSP 1 Score: 100 bits (250), Expect = 8.500e-25 Identity = 59/119 (49.58%), Postives = 78/119 (65.55%), Query Frame = 1
Query: 25 STLYIGLNALLNLVLAILVVRARIKTETNIGDGGKEEMIKAQRVHGNNVEYVPITLLVLIAVEMAAAPVWLVHALGAGLTVTRAAHALGLSSSTGRTAGRFLGTLGTWVVLLVGSIACI 381
+TLY+GL ALL LVL V R R+K + GDGG E + +A RV GN VE VP+ L+ L+A+ AAPVW+VHALGA V R HA+GL S G + GR +GTL + + LL+ + C+
Sbjct: 7 ATLYVGLFALLMLVLKANVGRVRVKEKVMFGDGGNEALQRAIRVQGNAVEDVPVVLIGLVALGAMAAPVWVVHALGAAFLVGRILHAVGLGGSAGSSMGRMVGTLLSAIALLLTAGVCV 125
BLAST of mRNA_P-wetherbeei_contig1566.6.1 vs. uniprot
Match: UPI00140E42FE (MAPEG family protein n=1 Tax=Thioalkalivibrio sp. XN279 TaxID=2714953 RepID=UPI00140E42FE) HSP 1 Score: 99.4 bits (246), Expect = 3.060e-24 Identity = 57/124 (45.97%), Postives = 79/124 (63.71%), Query Frame = 1
Query: 22 VSTLYIGLNALLNLVLAILVVRARIKTETNIGDGGKEEMIKAQRVHGNNVEYVPITLLVLIAVEMAAAPVWLVHALGAGLTVTRAAHALGLSSSTGRTAGRFLGTLGTWVVLLVGSIACIYYGL 393
++ Y GL LL LVL VV R + + +G GG ++ +A RVHGN EYVP+ L++L+ E+ AP WL+H LGAG + RAAHA GLS S G + GRF GTL TW+ LL+ ++ ++ L
Sbjct: 5 ITAFYGGLLGLLFLVLCWQVVDHRRRGKVGLGTGGNMDLERAVRVHGNFAEYVPLFLVLLLLAELGGAPGWLLHVLGAGFLLGRAAHAWGLSKSGGTSPGRFYGTLFTWIALLLVALLNLWLAL 128
BLAST of mRNA_P-wetherbeei_contig1566.6.1 vs. uniprot
Match: A0A845QE11_9HYPH (Glutathione S-transferase n=1 Tax=Pyruvatibacter mobilis TaxID=1712261 RepID=A0A845QE11_9HYPH) HSP 1 Score: 99.0 bits (245), Expect = 4.460e-24 Identity = 60/118 (50.85%), Postives = 79/118 (66.95%), Query Frame = 1
Query: 31 LYIGLNALLNLVLAILVVRARIKTETNIGDGGKEEMIKAQRVHGNNVEYVPITLLVLIAVEMAAAPVWLVHALGAGLTVTRAAHALGLSSSTGRTAGRFLGTLGTWVVLLVGSIACIY 384
LYIG+N LL LVLAILVVR R K ++GDGG ++ +A R HGNNVEYV I L LIA+ + A + L+HA G +TV R AHA+G+S+ G + R LGTL TW+ V + C++
Sbjct: 11 LYIGINLLLTLVLAILVVRQRAKHSVSLGDGGNADVERAIRAHGNNVEYVAIALPGLIALGLLGASLTLLHAAGLLVTVGRVAHAIGISN--GISIFRQLGTLATWIGAAVLGVGCLW 126
BLAST of mRNA_P-wetherbeei_contig1566.6.1 vs. uniprot
Match: A0A062TYK5_9PROT (Uncharacterized protein n=1 Tax=Hyphomonas beringensis TaxID=1280946 RepID=A0A062TYK5_9PROT) HSP 1 Score: 99.0 bits (245), Expect = 4.840e-24 Identity = 59/119 (49.58%), Postives = 77/119 (64.71%), Query Frame = 1
Query: 25 STLYIGLNALLNLVLAILVVRARIKTETNIGDGGKEEMIKAQRVHGNNVEYVPITLLVLIAVEMAAAPVWLVHALGAGLTVTRAAHALGLSSSTGRTAGRFLGTLGTWVVLLVGSIACI 381
+TLY+GL ALL LVL V R R K + GDG + M++A RV GN VE VPI L+ L+A+ AAPVW VH LGA + R HA+GL S+G + GR +GTL + VVLL+ + C+
Sbjct: 7 ATLYVGLFALLMLVLKANVARVRAKEKVMFGDGDNDAMLRAIRVQGNAVEDVPIVLIGLVALGAMAAPVWAVHGLGAAFLLGRVLHAVGLGGSSGSSMGRMVGTLLSAVVLLLTAGLCV 125 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1566.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1566.6.1 >prot_P-wetherbeei_contig1566.6.1 ID=prot_P-wetherbeei_contig1566.6.1|Name=mRNA_P-wetherbeei_contig1566.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=133bp MSNGIIPVSTLYIGLNALLNLVLAILVVRARIKTETNIGDGGKEEMIKAQback to top mRNA from alignment at P-wetherbeei_contig1566:6080..6478- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1566.6.1 ID=mRNA_P-wetherbeei_contig1566.6.1|Name=mRNA_P-wetherbeei_contig1566.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=399bp|location=Sequence derived from alignment at P-wetherbeei_contig1566:6080..6478- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1566:6080..6478- >mRNA_P-wetherbeei_contig1566.6.1 ID=mRNA_P-wetherbeei_contig1566.6.1|Name=mRNA_P-wetherbeei_contig1566.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=399bp|location=Sequence derived from alignment at P-wetherbeei_contig1566:6080..6478- (Phaeothamnion wetherbeei SAG_119_79)back to top |