mRNA_P-wetherbeei_contig1566.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1566.4.1
Unique NamemRNA_P-wetherbeei_contig1566.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1566.4.1 vs. uniprot
Match: A0A3C0TYQ8_9PROT (3'(2'),5'-bisphosphate nucleotidase CysQ n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TYQ8_9PROT)

HSP 1 Score: 360 bits (925), Expect = 1.710e-123
Identity = 170/254 (66.93%), Postives = 206/254 (81.10%), Query Frame = 1
Query:    1 ARHHRFAVSAAREAGALAMTYFGADYAKWDKGKNNPVTDADVAVDQLLRQRMQAFAPDYGWLSEETVDDKSRHTARRVWVVDPIDGTRAFIRGQPHFAVSIALLEDDRPVSAVIFNPATDQLFEASGTGPSLLNGAKVQVSTKNELQDARMLAAQGLFQHKRWTDPWPAMHVESRNSIAYQVALTASGHFDGCMNLWGAYDWDLAAADLILRAAGGHITDHTGAALRFNQEIPRHPSIVAANPALHSLLLGRME 762
            A  HR ++SAAREAG L M YFG DYA+WDKG NNPVT+AD+A D+LLR R+ +F P+YGWLSEET DD SR +ARR WVVDPIDGTRAFIRGQPHFA+SIAL+E+ RPV AV+FNPAT++LF+A   GP+ LNG  + VS KN LQDAR+LA++G+F+ KRW  PWP MHVE+RNSIAY+  L A+G FDGC+   GAYDWDLAAADLI+RAAGG +TDH+G  LRFNQ+ PR  ++VAA P LH+LLL R+ 
Sbjct:    6 ASEHRLSISAAREAGELVMKYFGGDYARWDKGGNNPVTEADLAADRLLRDRLSSFDPEYGWLSEETEDDSSRRSARRSWVVDPIDGTRAFIRGQPHFAISIALVEEARPVCAVVFNPATNELFDAVAEGPARLNGEVITVSGKNALQDARILASKGVFEQKRWKSPWPVMHVEARNSIAYKGGLIAAGIFDGCLLFSGAYDWDLAAADLIVRAAGGCMTDHSGQRLRFNQQAPRQKNMVAAGPELHALLLERLS 259          
BLAST of mRNA_P-wetherbeei_contig1566.4.1 vs. uniprot
Match: A0A3B9BFV8_9PROT (3'(2'),5'-bisphosphate nucleotidase CysQ n=5 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3B9BFV8_9PROT)

HSP 1 Score: 286 bits (733), Expect = 2.790e-94
Identity = 131/250 (52.40%), Postives = 177/250 (70.80%), Query Frame = 1
Query:   10 HRFAVSAAREAGALAMTYFGADYAKWDKGKNNPVTDADVAVDQLLRQRMQAFAPDYGWLSEETVDDKSRHTARRVWVVDPIDGTRAFIRGQPHFAVSIALLEDDRPVSAVIFNPATDQLFEASGTGPSLLNGAKVQVSTKNELQDARMLAAQGLFQHKRWTDPWPAMHVESRNSIAYQVALTASGHFDGCMNLWGAYDWDLAAADLILRAAGGHITDHTGAALRFNQEIPRHPSIVAANPALHSLLLGRM 759
            H  A+ AA EAG +AM+YFG ++A+WDKG +NPVT+AD+A+D +LR+ +    PD+GWLSEET D+  R T  R W+VDPIDGTRAF+RG+PHF + IAL+E  RP+SA++FNPA+ +L+EA   G + LNG  +  S + +++ ARML     +  KRW  PWP +H+E RNSIAY++AL A+G FDGC+ L    DWDLAAADLI+R AGG I+   GA L +NQ   RH   VA+  ALH  L+ ++
Sbjct:    6 HAVALDAAHEAGEIAMSYFGGEFARWDKGGDNPVTEADIAIDNMLRKALGDAFPDHGWLSEETEDNTDRLTQHRTWIVDPIDGTRAFMRGEPHFTICIALVEQARPISAIVFNPASGELYEAVSGGGARLNGQPITPSGQAQIEGARMLGTASFYHSKRWAVPWPDIHIEKRNSIAYRIALVAAGRFDGCLGLSSVNDWDLAAADLIIREAGGRISRRDGAELLYNQRSVRHAGFVASGHALHPALIDQL 255          
BLAST of mRNA_P-wetherbeei_contig1566.4.1 vs. uniprot
Match: A0A845QCX6_9HYPH (3'(2'),5'-bisphosphate nucleotidase CysQ n=3 Tax=Pyruvatibacter mobilis TaxID=1712261 RepID=A0A845QCX6_9HYPH)

HSP 1 Score: 283 bits (725), Expect = 5.060e-93
Identity = 137/251 (54.58%), Postives = 174/251 (69.32%), Query Frame = 1
Query:    7 HHRFAVSAAREAGALAMTYFGADYAKWDKGKNNPVTDADVAVDQLLRQRMQAFAPDYGWLSEETVDDKSRHTARRVWVVDPIDGTRAFIRGQPHFAVSIALLEDDRPVSAVIFNPATDQLFEASGTGPSLLNGAKVQVSTKNELQDARMLAAQGLFQHKRWTDPWPAMHVESRNSIAYQVALTASGHFDGCMNLWGAYDWDLAAADLILRAAGGHITDHTGAALRFNQEIPRHPSIVAANPALHSLLLGRM 759
            HH+    A RE GALA+ +       W K  + PVT+AD+AVD LL+QR+QA  PDYGWLSEET DD++R    R W+VDPIDGTRA+I+G+PH+AV  AL+ED RP+S VI+NPATDQLFEA     + LNGA++ V+T+  ++  RML A  +F+H  W   WP MHVE RNSIAY+ AL A+G FD  + +    DWDLAAADLI+  AGG +T HTG ALR+N   PRH S+VAA P L+  L  R+
Sbjct:    9 HHQLLREAVREGGALALEHARKGILAWRKDDDTPVTEADLAVDHLLKQRLQAAEPDYGWLSEETEDDETRLQTERQWLVDPIDGTRAYIKGRPHYAVVGALIEDGRPISGVIYNPATDQLFEAEAGKGAFLNGARIHVTTQEAVEGCRMLGASDMFRHPAWPQKWPEMHVEQRNSIAYRAALVAAGEFDAMLVMNWKNDWDLAAADLIVHEAGGQMTTHTGDALRYNARDPRHRSVVAAGPELYKALNARI 259          
BLAST of mRNA_P-wetherbeei_contig1566.4.1 vs. uniprot
Match: X5MMG7_9HYPH (FIG043197: Inositol monophosphatase family protein n=1 Tax=Candidatus Phaeomarinobacter ectocarpi TaxID=1458461 RepID=X5MMG7_9HYPH)

HSP 1 Score: 273 bits (698), Expect = 6.520e-89
Identity = 135/255 (52.94%), Postives = 171/255 (67.06%), Query Frame = 1
Query:    1 ARHHRFAVSAAREAGALAMTYFGADYAKWDKGKNNPVTDADVAVDQLLRQRMQAFAPDYGWLSEETVDDKSRHTARRVWVVDPIDGTRAFIRGQPHFAVSIALLEDDRPVSAVIFNPATDQLFEASGTGPSLLNGAKVQVSTKNELQDARMLAAQGLFQHKRWTDPWPAMHVESRNSIAYQVALTASGHFDGCMNLWGAYDWDLAAADLILRAAGGHITDHTGAALRFNQEIPRHPSIVAANPALHSLLLGRMEA 765
            A  H   + A RE GALA+ +F A     DK    PVT+AD+AVD LL+QR++A  PDYGWLSEET DD +R    R W+VDPIDGTRAFI+G+PHFAV  AL+++ RPV+  I+NPATD+LFEA     +LLNG  + V+   +++  RML A  +FQH  W   WP M +  RNSIAY+ AL ASG FD  + +    DWDLAAADLI+  AGGH+T HTG  L +N + PRH ++VAA PALH  L  R+ A
Sbjct:    8 ASDHAILLEAVREGGALALAHFKAGVTSQDKKDGTPVTEADLAVDALLKQRLRAAQPDYGWLSEETEDDAARLETTRQWMVDPIDGTRAFIKGRPHFAVVAALIDNGRPVAGAIYNPATDELFEAQSGKGALLNGTPISVTDVPDVEGCRMLGAADMFQHPAWPQKWPPMDIAQRNSIAYRGALVASGDFDAMLVMNWKNDWDLAAADLIVHEAGGHMTSHTGEGLTYNAKDPRHRTVVAAGPALHRALHDRIGA 262          
BLAST of mRNA_P-wetherbeei_contig1566.4.1 vs. uniprot
Match: A0A2E5BNC0_9HYPH (3'(2'),5'-bisphosphate nucleotidase CysQ n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2E5BNC0_9HYPH)

HSP 1 Score: 272 bits (695), Expect = 1.430e-88
Identity = 127/250 (50.80%), Postives = 172/250 (68.80%), Query Frame = 1
Query:   10 HRFAVSAAREAGALAMTYFGADYAKWDKGKNNPVTDADVAVDQLLRQRMQAFAPDYGWLSEETVDDKSRHTARRVWVVDPIDGTRAFIRGQPHFAVSIALLEDDRPVSAVIFNPATDQLFEASGTGPSLLNGAKVQVSTKNELQDARMLAAQGLFQHKRWTDPWPAMHVESRNSIAYQVALTASGHFDGCMNLWGAYDWDLAAADLILRAAGGHITDHTGAALRFNQEIPRHPSIVAANPALHSLLLGRM 759
            H    +A R+AGALA+ YF  D   WDKGK++PV++AD AV+ LL  R+Q   PDYGWLSEET DD +R T   VWV+DPIDGTRAFI+G+PHF +  AL++   PV A +FNPATD+ FEA+  G + LNG  +  ST++E+   RM A   +F+H  W +PWP M +  RNS+AY++ L A+G+ D C+ L    DWDLAAADLI+R AGG IT H GA L +N+   +H S++AA P L+++L  ++
Sbjct:    4 HALLCAAVRDAGALALGYFQTDLKHWDKGKDDPVSEADHAVNDLLHARLQGTRPDYGWLSEETEDDPTRLTCDHVWVIDPIDGTRAFIKGKPHFTICAALVQKGAPVCAAVFNPATDEFFEATRGGGATLNGVPISPSTRDEIAGCRMAAFAPMFKHPAWPEPWPEMEMVDRNSVAYRLVLVANGYVDACLALNRKNDWDLAAADLIVREAGGRITTHDGATLVYNKPFTKHRSLLAAGPNLYNVLFDKV 253          
BLAST of mRNA_P-wetherbeei_contig1566.4.1 vs. uniprot
Match: A0A081BAC7_9HYPH (Inositol-phosphate phosphatase n=1 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081BAC7_9HYPH)

HSP 1 Score: 270 bits (689), Expect = 1.780e-87
Identity = 129/252 (51.19%), Postives = 169/252 (67.06%), Query Frame = 1
Query:    1 ARHHRFAVSAAREAGALAMTYFGADYAKWDKGKNNPVTDADVAVDQLLRQRMQAFAPDYGWLSEETVDDKSRHTARRVWVVDPIDGTRAFIRGQPHFAVSIALLEDDRPVSAVIFNPATDQLFEASGTGPSLLNGAKVQVSTKNELQDARMLAAQGLFQHKRWTDPWPAMHVESRNSIAYQVALTASGHFDGCMNLWGAYDWDLAAADLILRAAGGHITDHTGAALRFNQEIPRHPSIVAANPALHSLLLGR 756
            A  H     A REAGALA+TY+ AD   W+K K +PV++AD+AV+ LL +R+Q   P YGWLSEET DD  R T  RVWV+DPIDGTRAFI+G+PHF +  AL+E+ RPV   +FNPA D+ FEA   G + LNGA +QVS  + +   RM A   +F+H  W +PWP M +  RNS+AY++AL A G  D  M L    DWD+AAADL++  AGG +TDH GA L +N+E  +H S +AA PAL+  ++ R
Sbjct:   14 AEDHALLCKAVREAGALALTYYKADAKHWEKSKGDPVSEADLAVNALLAERLQDARPGYGWLSEETEDDARRLTRTRVWVIDPIDGTRAFIKGKPHFTICGALVEEGRPVLGAVFNPAMDEFFEAVSGGGARLNGAPIQVSACDAIDGCRMAAFGPMFKHPAWREPWPEMEIVDRNSVAYRLALVACGQADAAMALNRKNDWDIAAADLLIHEAGGKVTDHQGAPLIYNREDTKHRSFIAAGPALYQAIIAR 265          
BLAST of mRNA_P-wetherbeei_contig1566.4.1 vs. uniprot
Match: A0A5C8PMK6_9HYPH (3'(2'),5'-bisphosphate nucleotidase CysQ n=1 Tax=Vineibacter terrae TaxID=2586908 RepID=A0A5C8PMK6_9HYPH)

HSP 1 Score: 268 bits (686), Expect = 4.600e-87
Identity = 130/245 (53.06%), Postives = 168/245 (68.57%), Query Frame = 1
Query:   22 VSAAREAGALAMTYFGADYAKWDKGKNNPVTDADVAVDQLLRQRMQAFAPDYGWLSEETVDDKSRHTARRVWVVDPIDGTRAFIRGQPHFAVSIALLEDDRPVSAVIFNPATDQLFEASGTGPSLLNGAKVQVSTKNELQDARMLAAQGLFQHKRWTDPWPAMHVESRNSIAYQVALTASGHFDGCMNLWGAYDWDLAAADLILRAAGGHITDHTGAALRFNQEIPRHPSIVAANPALHSLLLGR 756
            V+A REAGALA+ ++  + + W+K    PV++AD+ VD+ LRQR+    PDYGWLSEET DD +R T  RVWVVDPIDGTRAF+ G PHF  ++AL+ED  PV+A +FNPATD+ FEA     + LNG  ++VS + E+   RM A   +F+H  W DPWP M +  R+S+AY++AL ASG  D  M L    DWDLAAADLI+R AGG +T H G AL +N E P+ PS +AA P LH+ LL R
Sbjct:   12 VAAVREAGALALRFYRTELSVWEKVGGTPVSEADIMVDRHLRQRLCTGRPDYGWLSEETEDDTARLTRGRVWVVDPIDGTRAFVAGTPHFCHAVALVEDGMPVAAALFNPATDEFFEAVAHQGARLNGTPIRVSGRQEIAGCRMAAYGPMFKHPAWQDPWPDMEIIQRDSVAYRLALVASGGADAAMGLNTKNDWDLAAADLIVREAGGRVTSHDGKALAYNNEAPQQPSFLAAGPDLHAALLAR 256          
BLAST of mRNA_P-wetherbeei_contig1566.4.1 vs. uniprot
Match: A0A6N6VGH5_9HYPH (3'(2'),5'-bisphosphate nucleotidase CysQ n=2 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VGH5_9HYPH)

HSP 1 Score: 267 bits (683), Expect = 8.000e-87
Identity = 131/246 (53.25%), Postives = 168/246 (68.29%), Query Frame = 1
Query:   22 VSAAREAGALAMTYFGADYAKWDKGKNNPVTDADVAVDQLLRQRMQAFAPDYGWLSEETVDDKSRHTARRVWVVDPIDGTRAFIRGQPHFAVSIALLEDDRPVSAVIFNPATDQLFEASGTGPSLLNGAKVQVSTKNELQDARMLAAQGLFQHKRWTDPWPAMHVESRNSIAYQVALTASGHFDGCMNLWGAYDWDLAAADLILRAAGGHITDHTGAALRFNQEIPRHPSIVAANPALHSLLLGRM 759
            V A REAGALA++Y+  +  KW K  ++ VT+AD+AV+ LL +R+ A  PDYGWLSEET DD SR    RVWVVDPIDGTRAF +G+PHF +S+AL+ED  PV  V+FNPATD+ FEAS    + LNGA + VS + +++  RM A   +F+H  W  PWP M +  RNSIAY++AL A G  D  + L    DWDLAAADLILR AGG  T H G    +N+E+PRH S++AA P L+  L  R+
Sbjct:    2 VDAVREAGALALSYYQTELKKWMKLGDSIVTEADIAVNDLLEKRLAATRPDYGWLSEETEDDPSRLKRSRVWVVDPIDGTRAFAKGKPHFVLSVALVEDGAPVMGVLFNPATDEFFEASLGAGATLNGAAISVSERTKIEGCRMAAHGAMFKHPAWPAPWPEMEIIERNSIAYRIALVACGAADAALALTAKNDWDLAAADLILREAGGCFTTHDGKPFVYNRELPRHRSLIAAGPRLYEALYRRV 247          
BLAST of mRNA_P-wetherbeei_contig1566.4.1 vs. uniprot
Match: A0A2A5EQN2_9HYPH (3'(2'),5'-bisphosphate nucleotidase CysQ n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2A5EQN2_9HYPH)

HSP 1 Score: 266 bits (680), Expect = 3.990e-86
Identity = 127/254 (50.00%), Postives = 171/254 (67.32%), Query Frame = 1
Query:    4 RHHRFAVSAAREAGALAMTYFGADYAKWDKGKNNPVTDADVAVDQLLRQRMQAFAPDYGWLSEETVDDKSRHTARRVWVVDPIDGTRAFIRGQPHFAVSIALLEDDRPVSAVIFNPATDQLFEASGTGPSLLNGAKVQVSTKNELQDARMLAAQGLFQHKRWTDPWPAMHVESRNSIAYQVALTASGHFDGCMNLWGAYDWDLAAADLILRAAGGHITDHTGAALRFNQEIPRHPSIVAANPALHSLLLGRMEA 765
            + H     A REAGALA++YF  D  +WDKG ++PV++AD AV+ LLR+R+Q   P YGWLSEET DD +R     VWVVDPIDGTRAF++G+PHF + +AL+ + +PVSA +FNPATD+ FEA   G + LNG  +  S + E+   RM A   +F+H  W +PWP M +  RNS+AY++ L A+G  D C+ L    DWDLAAADLI+R AGG +T H+G  L +N+   +H S VAA P L++ L  R+ A
Sbjct:   14 KDHAVLCDAVREAGALALSYFRTDVKQWDKGDDDPVSEADHAVNDLLRERLQGAQPGYGWLSEETDDDAARLERDLVWVVDPIDGTRAFLKGKPHFTICVALVFNGKPVSAAVFNPATDEFFEAFAGGGARLNGEIIAPSARQEIAGCRMAAFGPMFKHPAWPEPWPEMEIIDRNSVAYRIVLVANGFVDACIALNPKNDWDLAAADLIIREAGGEMTTHSGQPLIYNKPATKHRSFVAAGPTLYAALFERVGA 267          
BLAST of mRNA_P-wetherbeei_contig1566.4.1 vs. uniprot
Match: A0A2N3C0G5_9PROT (3'(2'),5'-bisphosphate nucleotidase CysQ n=2 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A2N3C0G5_9PROT)

HSP 1 Score: 265 bits (677), Expect = 7.180e-86
Identity = 128/249 (51.41%), Postives = 168/249 (67.47%), Query Frame = 1
Query:   28 AAREAGALAMTYFGADYAKWDKGKNN-PVTDADVAVDQLLRQRMQAFAPDYGWLSEETVDDKSRHTARRVWVVDPIDGTRAFIRGQPHFAVSIALLEDDRPVSAVIFNPATDQLFEASGTGPSLLNGAKVQVSTKNELQDARMLAAQGLFQHKRWTDPWPAMHVESRNSIAYQVALTASGHFDGCMNLWGAYDWDLAAADLILRAAGGHITDHTGAALRFNQEIPRHPSIVAANPALHSLL---LGRME 762
            A REAGA+AM ++  D+ +W K  +N PVT+AD+ V+ LL  R+    PDYGWLSEET DD SR T R VWVVDPIDGTRAF +G PHF +S+AL+E+ RPV AV+FNPATD+ FEA     + LNG  ++   +  +   RM+A   +F+H  W +PWP M +  RNS+AY++AL ASG  D  + L G  DWDLAAADLIL  AGG +T H G    +N+   RHPS++AA PAL+  L   +GR++
Sbjct:    4 AVREAGAIAMRFYRTDHKQWSKAHDNTPVTEADIEVNDLLHARLAVARPDYGWLSEETEDDSSRLTQRLVWVVDPIDGTRAFAKGHPHFVISVALVENGRPVLAVLFNPATDEFFEAEAGKGARLNGRPIRTGDRGGIAGCRMIAFAPMFKHPAWPEPWPEMEISDRNSVAYRIALVASGEADATLALNGKSDWDLAAADLILHEAGGRMTAHDGTPFFYNRASTRHPSLLAAGPALYEALFEKVGRLK 252          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1566.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TYQ8_9PROT1.710e-12366.933'(2'),5'-bisphosphate nucleotidase CysQ n=1 Tax=A... [more]
A0A3B9BFV8_9PROT2.790e-9452.403'(2'),5'-bisphosphate nucleotidase CysQ n=5 Tax=A... [more]
A0A845QCX6_9HYPH5.060e-9354.583'(2'),5'-bisphosphate nucleotidase CysQ n=3 Tax=P... [more]
X5MMG7_9HYPH6.520e-8952.94FIG043197: Inositol monophosphatase family protein... [more]
A0A2E5BNC0_9HYPH1.430e-8850.803'(2'),5'-bisphosphate nucleotidase CysQ n=1 Tax=R... [more]
A0A081BAC7_9HYPH1.780e-8751.19Inositol-phosphate phosphatase n=1 Tax=Tepidicauli... [more]
A0A5C8PMK6_9HYPH4.600e-8753.063'(2'),5'-bisphosphate nucleotidase CysQ n=1 Tax=V... [more]
A0A6N6VGH5_9HYPH8.000e-8753.253'(2'),5'-bisphosphate nucleotidase CysQ n=2 Tax=P... [more]
A0A2A5EQN2_9HYPH3.990e-8650.003'(2'),5'-bisphosphate nucleotidase CysQ n=1 Tax=R... [more]
A0A2N3C0G5_9PROT7.180e-8651.413'(2'),5'-bisphosphate nucleotidase CysQ n=2 Tax=u... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1566contigP-wetherbeei_contig1566:3873..4640 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1333998.M2A_1494
Preferred namesuhB2
PFAMsInositol_P
Model size768
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00078
KEGG koko:K01092
KEGG ReactionR01185,R01186,R01187
KEGG Pathwayko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070
KEGG ModuleM00131
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.92e-88
EggNOG OGsCOG0483@1|root,COG0483@2|Bacteria,1MV4W@1224|Proteobacteria,2TV4R@28211|Alphaproteobacteria,4BQKW@82117|unclassified Alphaproteobacteria
EC3.1.3.25
DescriptionInositol monophosphatase family
Cds size768
COG categoryG
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186063.4594045-CDS-P-wetherbeei_contig1566:3872..46401683186063.4594045-CDS-P-wetherbeei_contig1566:3872..4640Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1566 3873..4640 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1566.4.1prot_P-wetherbeei_contig1566.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1566 3873..4640 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1566.4.1

>prot_P-wetherbeei_contig1566.4.1 ID=prot_P-wetherbeei_contig1566.4.1|Name=mRNA_P-wetherbeei_contig1566.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=256bp
ARHHRFAVSAAREAGALAMTYFGADYAKWDKGKNNPVTDADVAVDQLLRQ
RMQAFAPDYGWLSEETVDDKSRHTARRVWVVDPIDGTRAFIRGQPHFAVS
IALLEDDRPVSAVIFNPATDQLFEASGTGPSLLNGAKVQVSTKNELQDAR
MLAAQGLFQHKRWTDPWPAMHVESRNSIAYQVALTASGHFDGCMNLWGAY
DWDLAAADLILRAAGGHITDHTGAALRFNQEIPRHPSIVAANPALHSLLL
GRMEA*
back to top

mRNA from alignment at P-wetherbeei_contig1566:3873..4640-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1566.4.1 ID=mRNA_P-wetherbeei_contig1566.4.1|Name=mRNA_P-wetherbeei_contig1566.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=768bp|location=Sequence derived from alignment at P-wetherbeei_contig1566:3873..4640- (Phaeothamnion wetherbeei SAG_119_79)
GCAAGACATCACCGCTTTGCAGTAAGCGCAGCACGCGAAGCAGGCGCGCT GGCCATGACCTATTTCGGTGCGGATTACGCCAAATGGGACAAGGGAAAAA ACAACCCGGTAACCGATGCGGATGTGGCGGTTGACCAATTATTGCGCCAG CGCATGCAGGCGTTTGCACCTGACTATGGATGGCTGTCGGAAGAAACGGT TGATGACAAAAGCCGCCACACCGCGCGGCGTGTCTGGGTGGTGGATCCCA TTGACGGCACCCGCGCCTTTATCCGGGGCCAGCCGCATTTCGCTGTCAGC ATCGCCCTGCTGGAAGATGACAGGCCTGTTTCCGCCGTGATTTTTAATCC GGCGACGGATCAATTGTTTGAAGCGTCCGGCACGGGGCCAAGCCTGTTGA ACGGCGCAAAGGTGCAGGTCAGCACAAAAAACGAATTGCAGGACGCGCGC ATGCTGGCGGCGCAGGGATTGTTTCAGCATAAACGCTGGACTGACCCGTG GCCGGCCATGCATGTGGAATCGCGCAATTCCATTGCCTATCAGGTGGCGT TGACCGCATCGGGGCATTTTGATGGCTGCATGAATTTATGGGGGGCGTAT GATTGGGATCTGGCGGCGGCCGATCTGATTTTACGTGCGGCGGGCGGGCA TATTACCGACCACACCGGGGCGGCCCTGCGTTTCAATCAGGAAATCCCGC GCCATCCAAGCATTGTTGCCGCCAACCCGGCGCTGCACAGTCTTTTGCTG GGGCGGATGGAAGCGTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig1566:3873..4640-

>mRNA_P-wetherbeei_contig1566.4.1 ID=mRNA_P-wetherbeei_contig1566.4.1|Name=mRNA_P-wetherbeei_contig1566.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=768bp|location=Sequence derived from alignment at P-wetherbeei_contig1566:3873..4640- (Phaeothamnion wetherbeei SAG_119_79)
GCAAGACATCACCGCTTTGCAGTAAGCGCAGCACGCGAAGCAGGCGCGCT
GGCCATGACCTATTTCGGTGCGGATTACGCCAAATGGGACAAGGGAAAAA
ACAACCCGGTAACCGATGCGGATGTGGCGGTTGACCAATTATTGCGCCAG
CGCATGCAGGCGTTTGCACCTGACTATGGATGGCTGTCGGAAGAAACGGT
TGATGACAAAAGCCGCCACACCGCGCGGCGTGTCTGGGTGGTGGATCCCA
TTGACGGCACCCGCGCCTTTATCCGGGGCCAGCCGCATTTCGCTGTCAGC
ATCGCCCTGCTGGAAGATGACAGGCCTGTTTCCGCCGTGATTTTTAATCC
GGCGACGGATCAATTGTTTGAAGCGTCCGGCACGGGGCCAAGCCTGTTGA
ACGGCGCAAAGGTGCAGGTCAGCACAAAAAACGAATTGCAGGACGCGCGC
ATGCTGGCGGCGCAGGGATTGTTTCAGCATAAACGCTGGACTGACCCGTG
GCCGGCCATGCATGTGGAATCGCGCAATTCCATTGCCTATCAGGTGGCGT
TGACCGCATCGGGGCATTTTGATGGCTGCATGAATTTATGGGGGGCGTAT
GATTGGGATCTGGCGGCGGCCGATCTGATTTTACGTGCGGCGGGCGGGCA
TATTACCGACCACACCGGGGCGGCCCTGCGTTTCAATCAGGAAATCCCGC
GCCATCCAAGCATTGTTGCCGCCAACCCGGCGCTGCACAGTCTTTTGCTG
GGGCGGATGGAAGCGTGA
back to top