mRNA_P-wetherbeei_contig15658.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15658.2.1 vs. uniprot
Match: A0A537RDT3_9PROT ((2Fe-2S)-binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537RDT3_9PROT) HSP 1 Score: 197 bits (501), Expect = 9.580e-63 Identity = 89/121 (73.55%), Postives = 104/121 (85.95%), Query Frame = 1
Query: 1 TRFGCGLEQCGCCMVLIDGAPEKCCAKPVWSVAGKSVTTVEGLGAPDRPHPLQQAFIDEQAGQCGYCLSGILMSAKALLETNPSPTRAEIALALDGNICRCGSHNRILRAVEKAAAVMRAG 363
T+FGCGLEQCGCCMVL+DG PEK C KP+ +VAG + T+EGLG P+RPHPLQQAF+DEQAGQCGYCL GIL++AK LL+ NPSP+R EIA ALD NICRCGSH RILRAVE+AA ++R G
Sbjct: 36 TKFGCGLEQCGCCMVLVDGNPEKSCGKPLSAVAGTEIMTIEGLGTPERPHPLQQAFLDEQAGQCGYCLPGILITAKGLLDRNPSPSRKEIAEALDDNICRCGSHIRILRAVERAARLLREG 156
BLAST of mRNA_P-wetherbeei_contig15658.2.1 vs. uniprot
Match: A0A537V230_9PROT ((2Fe-2S)-binding protein n=4 Tax=Bacteria TaxID=2 RepID=A0A537V230_9PROT) HSP 1 Score: 196 bits (499), Expect = 1.930e-62 Identity = 92/121 (76.03%), Postives = 105/121 (86.78%), Query Frame = 1
Query: 1 TRFGCGLEQCGCCMVLIDGAPEKCCAKPVWSVAGKSVTTVEGLGAPDRPHPLQQAFIDEQAGQCGYCLSGILMSAKALLETNPSPTRAEIALALDGNICRCGSHNRILRAVEKAAAVMRAG 363
T+FGCGLEQCG CMVLI+G P K C K V +VAGK+V T+EGLG P+RPHPLQQAF+DEQAGQCGYCL GIL++AKALL+ NP+P+R EIALALD NICRCGSH+RILRAVE AAA MR G
Sbjct: 36 TKFGCGLEQCGTCMVLIEGEPVKSCGKAVSTVAGKTVLTIEGLGTPERPHPLQQAFLDEQAGQCGYCLPGILVTAKALLDRNPAPSRREIALALDDNICRCGSHHRILRAVETAAAKMREG 156
BLAST of mRNA_P-wetherbeei_contig15658.2.1 vs. uniprot
Match: A0A521M0A1_9HYPH ((2Fe-2S)-binding protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521M0A1_9HYPH) HSP 1 Score: 187 bits (475), Expect = 9.900e-59 Identity = 85/120 (70.83%), Postives = 101/120 (84.17%), Query Frame = 1
Query: 1 TRFGCGLEQCGCCMVLIDGAPEKCCAKPVWSVAGKSVTTVEGLGAPDRPHPLQQAFIDEQAGQCGYCLSGILMSAKALLETNPSPTRAEIALALDGNICRCGSHNRILRAVEKAAAVMRA 360
TR+GCGLEQCGCCMVL+D P C + + +VAG+ VTT+EGLG RPHPLQQAF+DEQAGQCGYCLSGIL+SAKALL+ NP P+RAEI ALD ++CRCG+H RILRAVE+AAA +RA
Sbjct: 35 TRYGCGLEQCGCCMVLVDEQPTYACTRELGTVAGRQVTTIEGLGMEARPHPLQQAFLDEQAGQCGYCLSGILISAKALLDRNPDPSRAEIVAALDKHLCRCGAHQRILRAVERAAATLRA 154
BLAST of mRNA_P-wetherbeei_contig15658.2.1 vs. uniprot
Match: UPI00136CE0F8 ((2Fe-2S)-binding protein n=1 Tax=Propylenella binzhouense TaxID=2555902 RepID=UPI00136CE0F8) HSP 1 Score: 185 bits (469), Expect = 8.100e-58 Identity = 85/121 (70.25%), Postives = 101/121 (83.47%), Query Frame = 1
Query: 1 TRFGCGLEQCGCCMVLIDGAPEKCCAKPVWSVAGKSVTTVEGLGAPDRPHPLQQAFIDEQAGQCGYCLSGILMSAKALLETNPSPTRAEIALALDGNICRCGSHNRILRAVEKAAAVMRAG 363
+RFGCGLEQCG CMVLIDG P C++ + +VAG+SVTT+EGLG HPLQQAFI+EQAGQCGYCLSGI++SA ALL NPSPTR E+A ALDG++CRCGSHNRI+RAV+KA +M AG
Sbjct: 40 SRFGCGLEQCGACMVLIDGEPAYSCSREIGTVAGRSVTTIEGLGREGSLHPLQQAFIEEQAGQCGYCLSGIIISAAALLAANPSPTRQEVAAALDGHLCRCGSHNRIIRAVQKAGRMMAAG 160
BLAST of mRNA_P-wetherbeei_contig15658.2.1 vs. uniprot
Match: A0A1H8YC93_9PROT (Nicotinate dehydrogenase subunit A n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8YC93_9PROT) HSP 1 Score: 184 bits (466), Expect = 1.980e-57 Identity = 82/121 (67.77%), Postives = 100/121 (82.64%), Query Frame = 1
Query: 1 TRFGCGLEQCGCCMVLIDGAPEKCCAKPVWSVAGKSVTTVEGLGAPDRPHPLQQAFIDEQAGQCGYCLSGILMSAKALLETNPSPTRAEIALALDGNICRCGSHNRILRAVEKAAAVMRAG 363
TR+GCGLEQCG CMVL+DG P C + + VA + VTT+EGLG P +PHPLQQAF+DEQAGQCGYCLSGI+MSAKALL+ NP+P+R +I ALD ++CRCG+H RILRAVE+AAA +R G
Sbjct: 35 TRYGCGLEQCGSCMVLVDGQPVYACTREIGMVADRKVTTIEGLGTPAKPHPLQQAFLDEQAGQCGYCLSGIVMSAKALLDRNPTPSRVDIVAALDKHLCRCGAHQRILRAVERAAATLRNG 155
BLAST of mRNA_P-wetherbeei_contig15658.2.1 vs. uniprot
Match: A0A6A7M5P1_9PROT (2Fe-2S iron-sulfur cluster binding domain-containing protein n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6A7M5P1_9PROT) HSP 1 Score: 183 bits (465), Expect = 2.810e-57 Identity = 82/121 (67.77%), Postives = 100/121 (82.64%), Query Frame = 1
Query: 1 TRFGCGLEQCGCCMVLIDGAPEKCCAKPVWSVAGKSVTTVEGLGAPDRPHPLQQAFIDEQAGQCGYCLSGILMSAKALLETNPSPTRAEIALALDGNICRCGSHNRILRAVEKAAAVMRAG 363
TR+GCGLEQCG CMVL+DG P C + V +VA + VTT+EGLG P +PHPLQQAF+DEQAGQCGYCLSGI+MSAKALL+ NP P+R++I ALD ++CRCG+H RILRAVE+AA M +G
Sbjct: 35 TRYGCGLEQCGTCMVLVDGQPAYACTREVGTVADRKVTTIEGLGTPAKPHPLQQAFLDEQAGQCGYCLSGIVMSAKALLDRNPKPSRSDIVAALDRHLCRCGAHQRILRAVERAAQAMSSG 155
BLAST of mRNA_P-wetherbeei_contig15658.2.1 vs. uniprot
Match: A0A1X7DL01_9HYPH (Nicotinate dehydrogenase subunit A n=1 Tax=Rhizobium oryzae TaxID=464029 RepID=A0A1X7DL01_9HYPH) HSP 1 Score: 183 bits (464), Expect = 4.110e-57 Identity = 86/119 (72.27%), Postives = 101/119 (84.87%), Query Frame = 1
Query: 1 TRFGCGLEQCGCCMVLIDGAPEKCCAKPVWSVAGKSVTTVEGLGAPDRPHPLQQAFIDEQAGQCGYCLSGILMSAKALLETNPSPTRAEIALALDGNICRCGSHNRILRAVEKAAAVMR 357
+R+GCGLEQCG CMVLIDGA E C++ V ++AG S+TTVEGLG + HPLQQAF+DEQAGQCGYCLSGIL++AKA L+ NP PTRAE+A ALD N+CRCGSH RILRAV +AAAVMR
Sbjct: 37 SRYGCGLEQCGACMVLIDGAAEYSCSREVGTLAGYSITTVEGLGTMEALHPLQQAFLDEQAGQCGYCLSGILIAAKAFLDRNPDPTRAEVAAALDRNLCRCGSHPRILRAVLRAAAVMR 155
BLAST of mRNA_P-wetherbeei_contig15658.2.1 vs. uniprot
Match: A0A536X3B8_9PROT ((2Fe-2S)-binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536X3B8_9PROT) HSP 1 Score: 181 bits (459), Expect = 1.720e-56 Identity = 83/119 (69.75%), Postives = 95/119 (79.83%), Query Frame = 1
Query: 1 TRFGCGLEQCGCCMVLIDGAPEKCCAKPVWSVAGKSVTTVEGLGAPDRPHPLQQAFIDEQAGQCGYCLSGILMSAKALLETNPSPTRAEIALALDGNICRCGSHNRILRAVEKAAAVMR 357
TRFGCG EQCG C VL+DG C P+WSV GK+VTTVEGLG+PD PHPLQ+AFIDEQA QCGYC SG+LMSA ALL P P+ AE+ ALDGN+CRCGSHNRI+RAV +A+AV R
Sbjct: 31 TRFGCGDEQCGACFVLVDGRAVASCTTPLWSVVGKAVTTVEGLGSPDSPHPLQRAFIDEQAAQCGYCTSGMLMSAAALLSRTPRPSEAEVKAALDGNLCRCGSHNRIVRAVLRASAVDR 149
BLAST of mRNA_P-wetherbeei_contig15658.2.1 vs. uniprot
Match: A0A8J6PMC7_9HYPH ((2Fe-2S)-binding protein n=1 Tax=Oryzicola mucosus TaxID=2767425 RepID=A0A8J6PMC7_9HYPH) HSP 1 Score: 181 bits (458), Expect = 3.370e-56 Identity = 83/119 (69.75%), Postives = 102/119 (85.71%), Query Frame = 1
Query: 1 TRFGCGLEQCGCCMVLIDGAPEKCCAKPVWSVAGKSVTTVEGLGAPDRPHPLQQAFIDEQAGQCGYCLSGILMSAKALLETNPSPTRAEIALALDGNICRCGSHNRILRAVEKAAAVMR 357
+R+GCGLEQCG CMVLIDG E C++ V ++AG+ VTTVEGLG+P+ HPLQ+AF++EQAGQCGYCLSGIL+SAKALL+ NP+PTRA++ ALD N+CRCGSH RILRAV KAAA +R
Sbjct: 37 SRYGCGLEQCGACMVLIDGNAEYSCSREVGTLAGRCVTTVEGLGSPEALHPLQRAFLEEQAGQCGYCLSGILVSAKALLDRNPNPTRADVIAALDANLCRCGSHPRILRAVLKAAATLR 155
BLAST of mRNA_P-wetherbeei_contig15658.2.1 vs. uniprot
Match: A0A068T4E9_NEOGA (Isoquinoline 1-oxidoreductase, alpha subunit n=5 Tax=Neorhizobium TaxID=1525371 RepID=A0A068T4E9_NEOGA) HSP 1 Score: 180 bits (457), Expect = 4.780e-56 Identity = 82/119 (68.91%), Postives = 101/119 (84.87%), Query Frame = 1
Query: 1 TRFGCGLEQCGCCMVLIDGAPEKCCAKPVWSVAGKSVTTVEGLGAPDRPHPLQQAFIDEQAGQCGYCLSGILMSAKALLETNPSPTRAEIALALDGNICRCGSHNRILRAVEKAAAVMR 357
+R+GCGLEQCG CMVLIDG+ E C++ V ++ G+S+TTVEGLG+ + HPLQQAF++EQAGQCGYCLSGIL++AKA L+ NP PTRAE+A ALD N+CRCGSH RILRAV KAAA +R
Sbjct: 37 SRYGCGLEQCGACMVLIDGSAEYSCSREVGTLGGRSITTVEGLGSAEALHPLQQAFLEEQAGQCGYCLSGILIAAKAFLDRNPDPTRAEVAAALDANLCRCGSHPRILRAVLKAAAALR 155 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15658.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15658.2.1 >prot_P-wetherbeei_contig15658.2.1 ID=prot_P-wetherbeei_contig15658.2.1|Name=mRNA_P-wetherbeei_contig15658.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=123bp TRFGCGLEQCGCCMVLIDGAPEKCCAKPVWSVAGKSVTTVEGLGAPDRPHback to top mRNA from alignment at P-wetherbeei_contig15658:1219..1587- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15658.2.1 ID=mRNA_P-wetherbeei_contig15658.2.1|Name=mRNA_P-wetherbeei_contig15658.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=369bp|location=Sequence derived from alignment at P-wetherbeei_contig15658:1219..1587- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15658:1219..1587- >mRNA_P-wetherbeei_contig15658.2.1 ID=mRNA_P-wetherbeei_contig15658.2.1|Name=mRNA_P-wetherbeei_contig15658.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=369bp|location=Sequence derived from alignment at P-wetherbeei_contig15658:1219..1587- (Phaeothamnion wetherbeei SAG_119_79)back to top |