mRNA_P-wetherbeei_contig15643.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15643.1.1 vs. uniprot
Match: A0A7C2QVG1_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2QVG1_9HYPH) HSP 1 Score: 114 bits (284), Expect = 1.400e-28 Identity = 73/177 (41.24%), Postives = 94/177 (53.11%), Query Frame = 1
Query: 40 MSVATAVPASAADLDYGVAG----SAYEDPRYSDIYRHPPP----PPRYAA-----PYAXXXXXXXXXYRDEXXXXXXXXXXXXXXXXXHYQRDGRAPA-GCLPQQVIRDRLQERGWQDFHDAQVAGNVAHVRARRPSGRTFDLTVDRCTGEILQSEAVDGRRADGP----PPPQDW 516
++ A + A AADL G G SAY+DPRY+DIY++PPP PPRY YA +RDE PA GC+P+ I++RL RGW DFHDAQ+ G +A V ARRPSGR F+L +DRCTGEI+ + ++ RR GP PP+ W
Sbjct: 11 LAAAVSTGARAADLYDGPPGDRYGSAYDDPRYADIYKYPPPRHHAPPRYVEVPXXXXYAGPPVPRERVWRDEYGYEPKYGPPPRRYSYAD-------PAYGCVPKDEIKERLLRRGWHDFHDAQLHGEIATVHARRPSGRLFELGIDRCTGEIVSAVPLEPRRF-GPFAYEAPPRRW 179
BLAST of mRNA_P-wetherbeei_contig15643.1.1 vs. uniprot
Match: A0A6N6SZ30_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6SZ30_9HYPH) HSP 1 Score: 104 bits (260), Expect = 4.810e-25 Identity = 71/160 (44.38%), Postives = 91/160 (56.88%), Query Frame = 1
Query: 31 LAAMSVATAVP--ASAADLDYGVA----GSAYEDPRYSDIYRHPPPPPRYA--APYAXXXXXXXXXYRDEXXXXXXXXXXXXXXXXXHYQRDG-RAP--AGCLPQQVIRDRLQERGWQDFHDAQVAGNVAHVRARRPSGRTFDLTVDRCTGEILQSEAVD 477
LAA +A AV A AADLD G GSAYEDPRY+DIYR+P P +Y+ PYA YRD+ Y G R P + CLP++ IR RL + GW+DF DAQ G+ A V+ARRPSGR F+LTVDRC+G ++ + ++
Sbjct: 6 LAAGLLAAAVSSGAQAADLDDGPPLDRYGSAYEDPRYADIYRYPSRP-QYSEPVPYARPPVPPAPIYRDDDDDDRYDYRGPRRYS---YNXXGPRQPYASHCLPREEIRHRLMQDGWRDFRDAQPWGDRATVQARRPSGRLFELTVDRCSGAVVSARPLE 161
BLAST of mRNA_P-wetherbeei_contig15643.1.1 vs. uniprot
Match: A0A537R828_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537R828_9PROT) HSP 1 Score: 102 bits (253), Expect = 9.230e-24 Identity = 82/198 (41.41%), Postives = 108/198 (54.55%), Query Frame = 1
Query: 16 VFATALAAMSVATAVPASAADLDYGVA----GSAYEDPRYSDIYRHP-------PPPPRYAA---PYAXXXXXXXXX------------YRDEXXXXXXXXXXXXXXXXXHYQRDGRAPAG-CLPQQVIRDRLQERGWQDFHDAQVAGNVAHVRARRPSGRTFDLTVDRCTGEILQSEAVDGRRADGP----PPPQDW 516
VFA +L A +V T A AADLD G GSAY+DPRY+DIY++P PPP YA PYAXXXXXXXXX YR++ Y AG C P++++++RL GW+DFHD V G +A V ARRP+GR F L + RC+GEI++++ ++G GP PPP+ W
Sbjct: 5 VFAASLMAAAVTTG--AQAADLDEGPPPDRYGSAYDDPRYADIYKYPRPPAYGVPPPGPYAGGPPPYAXXXXXXXXXXXXXXXVPREGVYRNDGYGYDRDYAPGPRRYS--YAEPVAPYAGRCAPRELVKERLYRDGWRDFHDGDVRGEIATVHARRPNGRLFVLAIHRCSGEIVRADPLEGGPV-GPYAYGPPPRRW 197
BLAST of mRNA_P-wetherbeei_contig15643.1.1 vs. uniprot
Match: A0A125NVZ1_HYPSL (Uncharacterized protein n=2 Tax=Hyphomicrobium sulfonivorans TaxID=121290 RepID=A0A125NVZ1_HYPSL) HSP 1 Score: 94.0 bits (232), Expect = 3.450e-21 Identity = 44/94 (46.81%), Postives = 62/94 (65.96%), Query Frame = 1
Query: 268 HYQRDGR--APA----GCLPQQVIRDRLQERGWQDFHDAQVAGNVAHVRARRPSGRTFDLTVDRCTGEILQSEAVDGRRADG-----PPPPQDW 516
HY DG PA GC+P++V RDRL++ GW+ FH + G V V+ARRP GR +DLT+DRC+GE+++++ + GRRA G PP P+ W
Sbjct: 48 HYDDDGLYDPPAYGRGGCIPREVARDRLRDAGWRGFHAIEPRGGVVLVKARRPDGRMYDLTIDRCSGEVVEAKPLYGRRAAGYGWGPPPRPEPW 141
BLAST of mRNA_P-wetherbeei_contig15643.1.1 vs. uniprot
Match: A0A6I0EEE7_HYPSQ (Uncharacterized protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A6I0EEE7_HYPSQ) HSP 1 Score: 88.6 bits (218), Expect = 3.720e-19 Identity = 37/72 (51.39%), Postives = 50/72 (69.44%), Query Frame = 1
Query: 271 YQRDGRAPAGCLPQQVIRDRLQERGWQDFHDAQVAGNVAHVRARRPSGRTFDLTVDRCTGEILQSEAVDGRR 486
Y A GC+P++V RDRL+ GW+ FH + GNV V+ARRPSGR FDLT+DRC+GE++ + + GRR
Sbjct: 58 YPPPAYAERGCVPREVARDRLRAAGWRGFHAVEPHGNVVLVKARRPSGRLFDLTIDRCSGEVVDARPIYGRR 129
BLAST of mRNA_P-wetherbeei_contig15643.1.1 vs. uniprot
Match: UPI0019C513F0 (Uncharacterized protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=UPI0019C513F0) HSP 1 Score: 87.8 bits (216), Expect = 7.770e-19 Identity = 38/71 (53.52%), Postives = 51/71 (71.83%), Query Frame = 1
Query: 301 CLPQQVIRDRLQERGWQDFHDAQVAGNVAHVRARRPSGRTFDLTVDRCTGEILQSEAVDGRR----ADGPP 501
C+P++V RDRL+ GW+ FH + V V+ARRPSGR FDLT+DRCTGE++ ++ + GRR ADGPP
Sbjct: 69 CIPREVARDRLRAAGWRGFHAIEPRDGVVLVKARRPSGRLFDLTIDRCTGEVVDAKPIFGRRYGRFADGPP 139
BLAST of mRNA_P-wetherbeei_contig15643.1.1 vs. uniprot
Match: A0A3S0EDQ8_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3S0EDQ8_9HYPH) HSP 1 Score: 85.5 bits (210), Expect = 8.370e-18 Identity = 56/137 (40.88%), Postives = 70/137 (51.09%), Query Frame = 1
Query: 97 GSAYEDPRYSDIYRHP--PPPPRYAAPYAXXXXXXXXXYRDEXXXXXXXXXXXXXXXXXHYQRDGRAPAG-CLPQQVIRDRLQERGWQDFHDAQVAGNVAHVRARRPSGRTFDLTVDRCTGEILQSEAVDGRRADGP 498
G AYEDPRY+D+YR+P P PP AP YRD+ R +A G C+P+QVIRDRL GW DF G + V ARRPSGR F LT++RC+GE++ + V A GP
Sbjct: 36 GPAYEDPRYADVYRYPDRPVPP---APV----------YRDDDYEFRP--------------RPRQAWRGECVPRQVIRDRLIREGWGDFALRDFEGELVTVSARRPSGRPFVLTIERCSGEVVDARPV---HAQGP 142
BLAST of mRNA_P-wetherbeei_contig15643.1.1 vs. uniprot
Match: A0A2S5P9F5_HYPSQ (Uncharacterized protein n=2 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5P9F5_HYPSQ) HSP 1 Score: 85.9 bits (211), Expect = 1.090e-17 Identity = 33/56 (58.93%), Postives = 45/56 (80.36%), Query Frame = 1
Query: 298 GCLPQQVIRDRLQERGWQDFHDAQVAGNVAHVRARRPSGRTFDLTVDRCTGEILQS 465
GC+P+ +I+ +L+ GW DFHD ++ G+ AHVRARRPSGR F+L VDRCTGEI+ +
Sbjct: 114 GCVPRHLIKQQLRAEGWSDFHDLELTGSTAHVRARRPSGRLFELKVDRCTGEIVNA 169
BLAST of mRNA_P-wetherbeei_contig15643.1.1 vs. uniprot
Match: A0A2W4RLI2_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4RLI2_9PROT) HSP 1 Score: 82.4 bits (202), Expect = 3.040e-16 Identity = 63/203 (31.03%), Postives = 84/203 (41.38%), Query Frame = 1
Query: 1 MSIRIVFATALAAMSVATAVPASAADLDYGVA----GSAYEDPRYSDIYRHPPPPPRYAAPYAXXXXXXXXXYRDEXXXXXXXXXXXXXXXXX----------------------HYQRDGRAPAGCLPQQVIRDRLQERGWQDFHDAQVAGNVAHVRARRPSGRTFDLTVDRCTGEILQSEAVDGRRADGPPPPQDWRYRDD 531
MS+R++ A + A+ +A + P AADL A GS Y+DPRY+++Y P P Y PYA D+ H ++ PA CL + +R L GW DF D ++ G A V ARRP+G + L VDRC GE+ V R DG WR RDD
Sbjct: 1 MSLRMLAAGFVTALPLALSTPTVAADLYDPYAPKYSGSPYDDPRYAELYGKPKP---YHRPYAEEPVEDLYEDPDDDDLEPFDPGPPKRYAKPFEEFDEWSDRPRWRKKPDFEPYHPKKTYLPPADCLSRHELRRELVRDGWSDFRDLEIRGKTAFVTARRPNGTLYRLEVDRCAGEV-----VSANRLDGHWDSYAWRRRDD 195
BLAST of mRNA_P-wetherbeei_contig15643.1.1 vs. uniprot
Match: A0A6I3KH68_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobium album TaxID=2665159 RepID=A0A6I3KH68_9HYPH) HSP 1 Score: 80.9 bits (198), Expect = 3.580e-16 Identity = 48/138 (34.78%), Postives = 64/138 (46.38%), Query Frame = 1
Query: 94 AGSAYEDPRYSDIYRHPPPPPRYAAPYAXXXXXXXXXYRDEXXXXXXXXXXXXXXXXXHYQRDGRAPAGCLPQQVIRDRLQERGWQDFHDAQVAGNVAHVRARRPSGRTFDLTVDRCTGEILQSEAVDGRR---ADGP 498
A YE P Y + PPPP RYA Y A + C+P++V RDRL+ GW+ FH + V V+ARRPSGR F+LT+DRC+GE++ + + GR ADGP
Sbjct: 26 AADLYEPP-YDEYGEGPPPPDRYA--------------------------DVPDDFEPPYPPPAYAESRCVPREVARDRLRAAGWRGFHAVEPRDRVVLVKARRPSGRMFELTIDRCSGEVVDARPIYGRWGRFADGP 136 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15643.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15643.1.1 >prot_P-wetherbeei_contig15643.1.1 ID=prot_P-wetherbeei_contig15643.1.1|Name=mRNA_P-wetherbeei_contig15643.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=183bp MSIRIVFATALAAMSVATAVPASAADLDYGVAGSAYEDPRYSDIYRHPPPback to top mRNA from alignment at P-wetherbeei_contig15643:568..1116- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15643.1.1 ID=mRNA_P-wetherbeei_contig15643.1.1|Name=mRNA_P-wetherbeei_contig15643.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=549bp|location=Sequence derived from alignment at P-wetherbeei_contig15643:568..1116- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15643:568..1116- >mRNA_P-wetherbeei_contig15643.1.1 ID=mRNA_P-wetherbeei_contig15643.1.1|Name=mRNA_P-wetherbeei_contig15643.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=549bp|location=Sequence derived from alignment at P-wetherbeei_contig15643:568..1116- (Phaeothamnion wetherbeei SAG_119_79)back to top |