mRNA_P-wetherbeei_contig1563.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1563.1.1
Unique NamemRNA_P-wetherbeei_contig1563.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1563.1.1 vs. uniprot
Match: L1K034_GUITC (SQHop_cyclase_C domain-containing protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K034_GUITC)

HSP 1 Score: 276 bits (707), Expect = 5.290e-90
Identity = 148/272 (54.41%), Postives = 177/272 (65.07%), Query Frame = 1
Query:   10 VTAARLRDAVNVILSLQNHDGGWATYENNRGFGWYEALNPSEVFGDIMIDYSYVECSSASLTALRAFRARFPGATEPRAAEIDLAVRRGDRFIRSIQRADGSWYGSWAVCFTYGTWFGIKALRAGGATPTDXXXXXXXXXXXXXXXXXXXXXXXXFACVDKAYPPPPQTASIDGPDIGTGGSGVVQTAWAMLALMASGTWDPSLPRHPSLCRPTGAAAALDRGVAFLMDKQLPTGDWAQ-EGITGVFNRSTGITYTAYRNVFPVWALGVYGQ 822
            ++  RL D  +++L+ QN DGGWATYENNRGFG+YE +NPSEVFGDIMIDYSYVECSSAS+TAL AF+  +P     R+ EID A++RG RFIRSIQR DGSWYGSW VCFTYGTWFGI+AL   G +  D                         +CVDK Y     T+    P  G GGSGVVQTAWA+L LMA+      LP    +        A+++G+ +LM  Q P GDW Q EGITGVFNRS GITYT YRN+FP+WALG Y +
Sbjct:    1 ISDERLFDCAHLLLTYQNADGGWATYENNRGFGFYEWMNPSEVFGDIMIDYSYVECSSASMTALAAFKKFYP---HHRSKEIDGALKRGARFIRSIQRPDGSWYGSWGVCFTYGTWFGIEALMTAGCSSDDGSVRLAVNFLLSKQNNNGGWGESYRSCVDKVYDGSEVTSIRLQPCYGRGGSGVVQTAWALLGLMAAKV---HLPEEVYV-------HAVEQGIKYLMSMQTPAGDWEQQEGITGVFNRSCGITYTQYRNIFPLWALGRYDE 259          
BLAST of mRNA_P-wetherbeei_contig1563.1.1 vs. uniprot
Match: A0A7S2XZ52_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ52_9STRA)

HSP 1 Score: 275 bits (703), Expect = 1.170e-89
Identity = 142/265 (53.58%), Postives = 169/265 (63.77%), Query Frame = 1
Query:   22 RLRDAVNVILSLQNHDGGWATYENNRGFGWYEALNPSEVFGDIMIDYSYVECSSASLTALRAFRARFPGATEPRAAEIDLAVRRGDRFIRSIQRADGSWYGSWAVCFTYGTWFGIKALRAGGATPTDXXXXXXXXXXXXXXXXXXXXXXXXFACVDKAYPPPPQTASIDGPDIGTGGSGVVQTAWAMLALMASGTWDPSLPRHPSLCRPTGAAAALDRGVAFLMDKQLPTGDWAQEGITGVFNRSTGITYTAYRNVFPVWALGVY 816
            R+ DAVNVI +LQN DGGWATYENNRG+GWYE  NPS+VFGDIMIDYSYVECS+A +TAL  F+  FP   + R++E+  ++ RG +F++SIQR+DGSWYGSW VCFTYGTWFGI+ L A G                              +CVDKAY     T        G  GSGVVQTAWA+L LM     D                AA+DRG+ FL ++QLP GDW QE ITGVFNR+ GITYTAYRN+FP+WALG Y
Sbjct:    2 RIFDAVNVIFTLQNDDGGWATYENNRGYGWYEIFNPSDVFGDIMIDYSYVECSTACITALVKFKKYFP---DHRSSEVAKSIARGRKFLKSIQRSDGSWYGSWGVCFTYGTWFGIEGLIASGEDNKSQCIQKALKFLAKQQRPNGGWGESYLSCVDKAYTEEEGTGQY-----GVEGSGVVQTAWALLGLMEGQYED---------------RAAIDRGIEFLKNQQLPNGDWDQEAITGVFNRNCGITYTAYRNIFPIWALGRY 243          
BLAST of mRNA_P-wetherbeei_contig1563.1.1 vs. uniprot
Match: D7G8L9_ECTSI (Cycloartenol synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8L9_ECTSI)

HSP 1 Score: 276 bits (707), Expect = 2.620e-89
Identity = 145/275 (52.73%), Postives = 170/275 (61.82%), Query Frame = 1
Query:    1 LPAVTAARLRDAVNVILSLQNHDGGWATYENNRGFGWYEALNPSEVFGDIMIDYSYVECSSASLTALRAFRARFPGATEPRAAEIDLAVRRGDRFIRSIQRADGSWYGSWAVCFTYGTWFGIKALRAGGATPTDXXXXXXXXXXXXXXXXXXXXXXXXFACVDKAYPPPP-QTASIDGPDIGTGGSGVVQTAWAMLALMASGTWDPSLPRHPSLCRPTGAAAALDRGVAFLMDKQLPTGDWAQEGITGVFNRSTGITYTAYRNVFPVWALGVYGQ 822
            LP ++  RL DAVN++LS QN DGGWATYEN RGF WYE LNPSE FGDIMIDYSYVECS +S+TAL+AF   +P   + RAAEI  ++  G RFIRSIQR DGSWYGSW VCFTY TWFG++ L + G                              A VDK +     Q+   +   +G GGSGVV T WAML L+AS  W+                 AL +G  FL   QLP GDW QEGITGVFNRSTGITYT+YRNV+P+WALG Y +
Sbjct:   41 LPPISPERLHDAVNILLSYQNRDGGWATYENTRGFRWYETLNPSETFGDIMIDYSYVECSCSSMTALKAFAKTYP---DHRAAEIKRSLSNGRRFIRSIQRPDGSWYGSWGVCFTYATWFGVEGLMSAGEPVESPTITKAVDFMLSRQNANGGWGESYLASVDKGWTETGVQSLQEEVSALGNGGSGVVHTGWAMLTLIASEQWEDR----------EDVRLALWKGSLFLRKMQLPRGDWEQEGITGVFNRSTGITYTSYRNVYPIWALGKYAR 302          
BLAST of mRNA_P-wetherbeei_contig1563.1.1 vs. uniprot
Match: A0A6S9IZA0_HETAK (Terpene cyclase/mutase family member (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9IZA0_HETAK)

HSP 1 Score: 287 bits (735), Expect = 2.250e-87
Identity = 150/269 (55.76%), Postives = 172/269 (63.94%), Query Frame = 1
Query:   22 RLRDAVNVILSLQNHDGGWATYENNRGFGWYEALNPSEVFGDIMIDYSYVECSSASLTALRAFRARFPGATEPRAAEIDLAVRRGDRFIRSIQRADGSWYGSWAVCFTYGTWFGIKALRAGGATPTDXXXXXXXXXXXXXXXXXXXXXXXXFACVDKAYPPPPQTASIDG--PDIGTGGSGVVQTAWAMLALMASGTWDPSLPRHPSLCRPTGAAAALDRGVAFLMDKQLPTGDWAQEGITGVFNRSTGITYTAYRNVFPVWALGVYGQ 822
            RL  A  ++LS QN DGGWATYENNRG+GWYEALNPS+VFGDIMIDYSYVECS+A L+AL  FR  FP   E RA EI+ A+ RG RF++SIQR DGSWYGSW VCF Y TWFGI+ L   G                              +CVDKAY       S  G  P +G GGSGVVQTAWA+L LM     DP +              A++RGVA+LM KQL  GDW QEG+TGVFNR+ GITYTAYRNVFP+WALG YG+
Sbjct:  621 RLHQAAQILLSYQNRDGGWATYENNRGYGWYEALNPSDVFGDIMIDYSYVECSTACLSALATFRKEFP---EHRAGEIEGALERGRRFVKSIQRPDGSWYGSWGVCFCYATWFGIEGLVVSGEPLDSPHITRAVAFLLSKQRPNGGWGESYLSCVDKAY-------SEGGCLPGLGDGGSGVVQTAWALLGLMEGAPHDPKV------------RTAVNRGVAYLMQKQLADGDWEQEGLTGVFNRNCGITYTAYRNVFPIWALGRYGR 867          
BLAST of mRNA_P-wetherbeei_contig1563.1.1 vs. uniprot
Match: A0A7S3ADP3_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ADP3_9EUKA)

HSP 1 Score: 270 bits (690), Expect = 9.350e-86
Identity = 142/272 (52.21%), Postives = 169/272 (62.13%), Query Frame = 1
Query:    7 AVTAARLRDAVNVILSLQNHDGGWATYENNRGFGWYEALNPSEVFGDIMIDYSYVECSSASLTALRAFRARFPGATEPRAAEIDLAVRRGDRFIRSIQRADGSWYGSWAVCFTYGTWFGIKALRAGGATPTDXXXXXXXXXXXXXXXXXXXXXXXXFACVDKAYPPPPQTASIDGPDIGTGGSGVVQTAWAMLALMASGTWDPSLPRHPSLCRPTGAAAALDRGVAFLMDKQLPTGDWAQEGITGVFNRSTGITYTAYRNVFPVWALGVYGQ 822
            A+T  RL  A+NV+L+LQN DGGWATYENNRG+GWYE LNPSEVFGDIMIDYSYVECS ASL+A+ AF   +P   E R  E+  ++  G +FI+SIQR DGSWYGSW  CFTYGTWFG++ L   G                              +C DKAY      A       G GGSGVV TAWA+LALMA+GT D                 A+ RG+ +LM +QLP GDW QEGI GVFNR+ GI+YT YRN+FP+WALG Y +
Sbjct:  136 AITDERLYKALNVLLALQNVDGGWATYENNRGYGWYEWLNPSEVFGDIMIDYSYVECSMASLSAVYAFHQAYP---EHRKDEVVKSIAAGRKFIKSIQREDGSWYGSWGCCFTYGTWFGVEGLVLSGEPAGSDSLRRACNFLLSKQNANGGWGEDFTSCYDKAY------AQAGMQRYGNGGSGVVNTAWALLALMAAGTSDRD---------------AVRRGIQYLMTEQLPNGDWKQEGIAGVFNRACGISYTQYRNIFPMWALGRYAK 383          
BLAST of mRNA_P-wetherbeei_contig1563.1.1 vs. uniprot
Match: A0A7S0HVM2_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HVM2_9CRYP)

HSP 1 Score: 275 bits (703), Expect = 2.320e-85
Identity = 161/274 (58.76%), Postives = 187/274 (68.25%), Query Frame = 1
Query:   10 VTAARLRDAVNVILSLQNHDGGWATYENNRGFGWYEALNPSEVFGDIMIDYSYVECSSASLTALRAFRARFPGATEPRAAEIDLAVRRGDRFIRSIQRADGSWYGSWAVCFTYGTWFGIKALRAGGATPTDXXXXXXXXXXXXXXXXXXXXXXXXFACVDKAYPPPPQTASIDGPD---IGTGGSGVVQTAWAMLALMASGTWDPSLPRHPSLCRPTGAAAALDRGVAFLMDKQLPTGDWAQEGITGVFNRSTGITYTAYRNVFPVWALGVYGQ 822
            ++  RL D  +++L+ QN DGGWATYENNRGFG+YE +NPSEVFGDIMIDYSYVECSSA +TAL AF+  +P     R+ EI  A++RG RFIRSIQR DGSWYGSWAVCFTYGTWFGI+AL   G +  D        XXXXXXXXXXXX     +CVDKAY         DG +    G GGSGVVQTAWA+L LMA+        R P   R      A++ G+ FLM  Q   GDW QEGITGVFNRS GITYT YRN+FP+WALG Y +
Sbjct:  330 ISDERLFDCAHLLLTYQNADGGWATYENNRGFGFYEWMNPSEVFGDIMIDYSYVECSSACMTALAAFKKFYP---HHRSDEISGALQRGIRFIRSIQRPDGSWYGSWAVCFTYGTWFGIEALTTAGCSADDSSVRRAVKXXXXXXXXXXXXGESYRSCVDKAY---------DGSEEACYGRGGSGVVQTAWALLGLMAARV------RLPEEVR------AVEEGIKFLMSMQTAAGDWEQEGITGVFNRSCGITYTQYRNIFPIWALGRYDE 579          
BLAST of mRNA_P-wetherbeei_contig1563.1.1 vs. uniprot
Match: A0A7S1CZC1_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZC1_CYCTE)

HSP 1 Score: 265 bits (677), Expect = 2.380e-82
Identity = 136/263 (51.71%), Postives = 168/263 (63.88%), Query Frame = 1
Query:   22 RLRDAVNVILSLQNHDGGWATYENNRGFGWYEALNPSEVFGDIMIDYSYVECSSASLTALRAFRARFPGATEPRAAEIDLAVRRGDRFIRSIQRADGSWYGSWAVCFTYGTWFGIKALRAGGATPTDXXXXXXXXXXXXXXXXXXXXXXXXFACVDKAYPPPPQTASIDGPDIGTGGSGVVQTAWAMLALMASGTWDPSLPRHPSLCRPTGAAAALDRGVAFLMDKQLPTGDWAQEGITGVFNRSTGITYTAYRNVFPVWALG 810
            RL +A+NVI++LQN D GWATYENNRGFGW+E LNPSEVFGDIMIDYSYVE + AS+TA+  FR  +P     R  EI+ ++++G  F++SIQRADGSWYGSWA CFTYG WFG++ L   G  P+                          +C DKAY P    A       G GGSGV+ TAWA+LAL  +   D                 A+ RG+ FLMD+QLP+GDW Q+GI+GVFNR+ GITYT+YRNVFP+WALG
Sbjct:  257 RLENAINVIITLQNEDNGWATYENNRGFGWFEQLNPSEVFGDIMIDYSYVELTMASMTAIIDFRKLYPN---HRVEEIEHSLQKGRDFMKSIQRADGSWYGSWACCFTYGCWFGVEGLIKAGEDPSCPEIQKACSFLLSHQRENGGWGEDFTSCYDKAYAPHGMKA------YGVGGSGVINTAWALLALSCAQCQD---------------LEAIRRGIKFLMDQQLPSGDWPQQGISGVFNRACGITYTSYRNVFPIWALG 495          
BLAST of mRNA_P-wetherbeei_contig1563.1.1 vs. uniprot
Match: A0A835ZEP3_9STRA (Terpene cyclase/mutase family member n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEP3_9STRA)

HSP 1 Score: 273 bits (698), Expect = 5.580e-82
Identity = 154/279 (55.20%), Postives = 169/279 (60.57%), Query Frame = 1
Query:   22 RLRDAVNVILSLQNHDGGWATYENNRGFGWYEALNPSEVFGDIMIDYSYVECSSASLTALRAFRARFPGATEPRAAEIDLAVRRGDRFIRSIQRADGSWYGSWAVCFTYGTWFGIKALRAGGATPTDXXXXXXXXXXXXXXXXXXXXXXXX-------FACVDKAYPPPPQTASIDGP-DIGTGGSGVVQTAWAMLALMAS----GTWDPSLPRHPSLCRPTGAAAALDRGVAFLMDKQLPTGDWAQEGITGVFNRSTGITYTAYRNVFPVWALGVYGQ 822
            RL DAVNVI SLQN DGGWATYEN RGFGWYE+LNPSEVFGDIMIDYSYVEC+SA +TAL AF  R P                G  F+RSIQRADGSWYGSWAVCFTYGTWFG+  L A  AT                                   ACV+KAYP    T S  G  ++G GGSGVVQTAWA+LAL A+    G                   A   RG AFL  +QLP GDWAQEGITGVFNRS GI+Y+AYRN+FPVWALGVY +
Sbjct:  617 RLYDAVNVIFSLQNEDGGWATYENTRGFGWYESLNPSEVFGDIMIDYSYVECTSACVTALAAFARRHP---RXXXXXXXXXXXXGGAFLRSIQRADGSWYGSWAVCFTYGTWFGVVGLAAVAATARRPLSAAERGAVARAAAFLLRRQRANGGWGESYLACVNKAYPEADGTRSTSGGGELGAGGSGVVQTAWAVLALAAADLRPGXXXXXXXXXXXXXXXXXXXA---RGAAFLRTRQLPDGDWAQEGITGVFNRSCGISYSAYRNIFPVWALGVYAR 889          
BLAST of mRNA_P-wetherbeei_contig1563.1.1 vs. uniprot
Match: A0A7S2R9R7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9R7_9STRA)

HSP 1 Score: 259 bits (661), Expect = 1.890e-81
Identity = 158/271 (58.30%), Postives = 184/271 (67.90%), Query Frame = 1
Query:    4 PAVTAARLRDAVNVILSLQNHDGGWATYENNRGFGWYEALNPSEVFGDIMIDYSYVECSSASLTALRAFRARFPGATEPRAAEIDLAVRRGDRFIRSIQRADGSWYGSWAVCFTYGTWFGIKALRAGGATPTDXXXXXXXXXXXXXXXXXXXXXXXXFACVDKAYPPPPQTASIDGPDIGTGGSGVVQTAWAMLALMASGTWDPSLPRHPSLCRPTGAAAALDRGVAFLMDKQLPTGDWAQEGITGVFNRSTGITYTAYRNVFPVWALGVY 816
            P+    R  DA  V+L+LQN DGG+ATYENNRG+GWYE LNPSEVFGDIMIDYSYVEC++AS+ AL AF   FP   + R  E+  A+RR  +F+  IQR DGSWYGSW  CFTY +WFG++ L   G       XXXXXXXXXXXXXXXXXXXXXX    DKAY P    A       G  GSGVV T WA+L+LMA+G+ D                 A+ RG+ +LMD+QLP GDW QEGI GVFNR+ GITYTAYRNVFP+WALG Y
Sbjct:  101 PSYPDQRFFDACTVVLTLQNSDGGFATYENNRGYGWYEWLNPSEVFGDIMIDYSYVECTNASIGALAAFHRAFP---DHRTQEVTSAIRRARQFLLDIQRPDGSWYGSWGCCFTYASWFGVEGLLQAGEPQGSPAXXXXXXXXXXXXXXXXXXXXXXXXXXDKAYAPSGMAA------FGDQGSGVVNTGWALLSLMAAGSTD---------------TRAVQRGIQYLMDRQLPDGDWPQEGIAGVFNRACGITYTAYRNVFPIWALGRY 347          
BLAST of mRNA_P-wetherbeei_contig1563.1.1 vs. uniprot
Match: B8BV49_THAPS (Terpene cyclase/mutase family member n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BV49_THAPS)

HSP 1 Score: 267 bits (683), Expect = 2.030e-81
Identity = 141/267 (52.81%), Postives = 162/267 (60.67%), Query Frame = 1
Query:   10 VTAARLRDAVNVILSLQNHDGGWATYENNRGFGWYEALNPSEVFGDIMIDYSYVECSSASLTALRAFRARFPGATEPRAAEIDLAVRRGDRFIRSIQRADGSWYGSWAVCFTYGTWFGIKALRAGGATPTDXXXXXXXXXXXXXXXXXXXXXXXXFACVDKAYPPPPQTASIDGPDIGTGGSGVVQTAWAMLALMASGTWDPSLPRHPSLCRPTGAAAALDRGVAFLMDKQLPTGDWAQEGITGVFNRSTGITYTAYRNVFPVWALG 810
            +   RL DAVNVIL+LQN DGGWATYENNRGFGWYE LNPSEVFGDIMIDYSYVECS ASLTAL  F  +FP     R  E+  A+RRG  F++SIQR DGSWYGSWA CF YG WFG++ L   G   +                          +C DK Y      A       G  GSGVV TAWA++AL A+                     A+ RGV +LM +QL +GDW QEGI+GVFNR+ GITYTAYRNVFP+WALG
Sbjct:  426 IDPTRLYDAVNVILTLQNEDGGWATYENNRGFGWYEELNPSEVFGDIMIDYSYVECSMASLTALAEFHEKFP---HHRTKEVTFAIRRGGEFVKSIQREDGSWYGSWACCFCYGCWFGVEGLIKTGEPTSSSAIQKCCEFLLSHQRPNGGWGEDFTSCYDKDY------AENGMKSYGDDGSGVVNTAWALMALSAANC---------------NNVDAIRRGVQYLMKRQLESGDWPQEGISGVFNRACGITYTAYRNVFPIWALG 668          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1563.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
L1K034_GUITC5.290e-9054.41SQHop_cyclase_C domain-containing protein (Fragmen... [more]
A0A7S2XZ52_9STRA1.170e-8953.58Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D7G8L9_ECTSI2.620e-8952.73Cycloartenol synthase n=1 Tax=Ectocarpus siliculos... [more]
A0A6S9IZA0_HETAK2.250e-8755.76Terpene cyclase/mutase family member (Fragment) n=... [more]
A0A7S3ADP3_9EUKA9.350e-8652.21Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S0HVM2_9CRYP2.320e-8558.76Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S1CZC1_CYCTE2.380e-8251.71Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A835ZEP3_9STRA5.580e-8255.20Terpene cyclase/mutase family member n=1 Tax=Tribo... [more]
A0A7S2R9R7_9STRA1.890e-8158.30Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
B8BV49_THAPS2.030e-8152.81Terpene cyclase/mutase family member n=1 Tax=Thala... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1563contigP-wetherbeei_contig1563:2939..3880 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog55529.EKX53909
Preferred nameLSS
PFAMsSQHop_cyclase_C,SQHop_cyclase_N
Model size822
Max annot lvl2759|Eukaryota
KEGG rclassRC00874,RC01582,RC02604
KEGG koko:K01852,ko:K01853,ko:K15811
KEGG ReactionR03199,R03200,R09689
KEGG Pathwayko00100,ko00909,ko01100,ko01110,ko01130,map00100,map00909,map01100,map01110,map01130
KEGG ModuleM00101
Hectar predicted targeting categoryother localisation
GOsGO:0000250,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005811,GO:0006066,GO:0006629,GO:0006694,GO:0006695,GO:0006696,GO:0006720,GO:0006721,GO:0006722,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008204,GO:0008299,GO:0008610,GO:0009058,GO:0009889,GO:0009987,GO:0010685,GO:0010686,GO:0012505,GO:0016020,GO:0016104,GO:0016114,GO:0016125,GO:0016126,GO:0016128,GO:0016129,GO:0016853,GO:0016866,GO:0019216,GO:0019218,GO:0019222,GO:0019748,GO:0031559,GO:0031647,GO:0031984,GO:0042175,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044107,GO:0044108,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0045540,GO:0046165,GO:0046890,GO:0050789,GO:0050810,GO:0062012,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0090181,GO:0097384,GO:0098827,GO:0106118,GO:1900579,GO:1900581,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653,GO:1902930
Exons2
Evalue8.67e-91
EggNOG OGsCOG1657@1|root,KOG0497@2759|Eukaryota
Ec32 ortholog descriptionCycloartenol synthase
Ec32 orthologEc-00_010980.1
EC5.4.99.32,5.4.99.7,5.4.99.8
Descriptionoxidosqualene cyclase activity
Cds size822
COG categoryI
BiGG ReactioniMM904.YHR072W,iND750.YHR072W
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186062.5648634-CDS-P-wetherbeei_contig1563:2938..31001683186062.5648634-CDS-P-wetherbeei_contig1563:2938..3100Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1563 2939..3100 -
1683186062.5773673-CDS-P-wetherbeei_contig1563:3220..38801683186062.5773673-CDS-P-wetherbeei_contig1563:3220..3880Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1563 3221..3880 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1563.1.1prot_P-wetherbeei_contig1563.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1563 2939..3880 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1563.1.1

>prot_P-wetherbeei_contig1563.1.1 ID=prot_P-wetherbeei_contig1563.1.1|Name=mRNA_P-wetherbeei_contig1563.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=274bp
LPAVTAARLRDAVNVILSLQNHDGGWATYENNRGFGWYEALNPSEVFGDI
MIDYSYVECSSASLTALRAFRARFPGATEPRAAEIDLAVRRGDRFIRSIQ
RADGSWYGSWAVCFTYGTWFGIKALRAGGATPTDSAVARAVRFLLVRQNA
NGGWGESYFACVDKAYPPPPQTASIDGPDIGTGGSGVVQTAWAMLALMAS
GTWDPSLPRHPSLCRPTGAAAALDRGVAFLMDKQLPTGDWAQEGITGVFN
RSTGITYTAYRNVFPVWALGVYGQ
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mRNA from alignment at P-wetherbeei_contig1563:2939..3880-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1563.1.1 ID=mRNA_P-wetherbeei_contig1563.1.1|Name=mRNA_P-wetherbeei_contig1563.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=942bp|location=Sequence derived from alignment at P-wetherbeei_contig1563:2939..3880- (Phaeothamnion wetherbeei SAG_119_79)
CTGCCGGCGGTTACTGCCGCCCGCCTGCGCGACGCTGTCAACGTCATCCT GTCGCTGCAGAACCACGACGGCGGCTGGGCGACGTACGAAAACAACCGCG GCTTCGGCTGGTACGAGGCGCTAAATCCCAGTGAAGTCTTCGGTGACATC ATGATCGACTATTCGTACGTTGAGTGCTCCAGCGCCAGCCTGACGGCACT GCGCGCCTTCCGCGCGCGTTTCCCCGGCGCGACGGAGCCCCGCGCGGCGG AGATCGACTTGGCGGTCCGGCGTGGCGACCGCTTCATCCGGAGCATCCAG CGGGCGGATGGGTCGTGGTATGGGTCCTGGGCGGTCTGCTTTACGTACGG CACGTGGTTCGGCATCAAGGCGCTGCGCGCGGGCGGCGCGACGCCCACCG ACTCCGCCGTGGCGCGCGCTGTCCGCTTTCTGCTGGTGCGGCAGAATGCC AATGGCGGCTGGGGTGAGTCATACTTCGCTTGCGTTGACAAGGCGTACCC GCCGCCGCCGCAGACGGCCAGCATCGACGGCCCCGATATCGGCACGGGCG GCAGCGGCGTCGTCCAGACGGCATGGGCCATGCTGGCGCTCATGGCGTCG GGCACCTGGGACCCGTCCCTGCCGCGGCACCCTTCCCTCTGTCGGCCGAC CGGCGCGGCGGTTTCAGCGGTAAACTCGGCGGCGGTGGTAGCGGCGGAGG CGGCGGCGGCGGACGCGTCGCCGGCGGCCGGGGGGGAGTCAGCTCTCACG GGGCTGGACGGGTCATCGGCGGCGGTGCAGGCGGCGCTGGACCGTGGCGT GGCGTTTTTGATGGACAAGCAGCTGCCGACGGGCGACTGGGCGCAGGAGG GCATCACGGGCGTGTTCAATCGGAGCACCGGTATCACCTACACGGCGTAC CGGAACGTGTTCCCGGTGTGGGCGCTGGGGGTCTATGGGCAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1563:2939..3880-

>mRNA_P-wetherbeei_contig1563.1.1 ID=mRNA_P-wetherbeei_contig1563.1.1|Name=mRNA_P-wetherbeei_contig1563.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=822bp|location=Sequence derived from alignment at P-wetherbeei_contig1563:2939..3880- (Phaeothamnion wetherbeei SAG_119_79)
CTGCCGGCGGTTACTGCCGCCCGCCTGCGCGACGCTGTCAACGTCATCCT
GTCGCTGCAGAACCACGACGGCGGCTGGGCGACGTACGAAAACAACCGCG
GCTTCGGCTGGTACGAGGCGCTAAATCCCAGTGAAGTCTTCGGTGACATC
ATGATCGACTATTCGTACGTTGAGTGCTCCAGCGCCAGCCTGACGGCACT
GCGCGCCTTCCGCGCGCGTTTCCCCGGCGCGACGGAGCCCCGCGCGGCGG
AGATCGACTTGGCGGTCCGGCGTGGCGACCGCTTCATCCGGAGCATCCAG
CGGGCGGATGGGTCGTGGTATGGGTCCTGGGCGGTCTGCTTTACGTACGG
CACGTGGTTCGGCATCAAGGCGCTGCGCGCGGGCGGCGCGACGCCCACCG
ACTCCGCCGTGGCGCGCGCTGTCCGCTTTCTGCTGGTGCGGCAGAATGCC
AATGGCGGCTGGGGTGAGTCATACTTCGCTTGCGTTGACAAGGCGTACCC
GCCGCCGCCGCAGACGGCCAGCATCGACGGCCCCGATATCGGCACGGGCG
GCAGCGGCGTCGTCCAGACGGCATGGGCCATGCTGGCGCTCATGGCGTCG
GGCACCTGGGACCCGTCCCTGCCGCGGCACCCTTCCCTCTGTCGGCCGAC
CGGCGCGGCGGCGGCGCTGGACCGTGGCGTGGCGTTTTTGATGGACAAGC
AGCTGCCGACGGGCGACTGGGCGCAGGAGGGCATCACGGGCGTGTTCAAT
CGGAGCACCGGTATCACCTACACGGCGTACCGGAACGTGTTCCCGGTGTG
GGCGCTGGGGGTCTATGGGCAG
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