mRNA_P-wetherbeei_contig1563.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1563.1.1 vs. uniprot
Match: L1K034_GUITC (SQHop_cyclase_C domain-containing protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K034_GUITC) HSP 1 Score: 276 bits (707), Expect = 5.290e-90 Identity = 148/272 (54.41%), Postives = 177/272 (65.07%), Query Frame = 1
Query: 10 VTAARLRDAVNVILSLQNHDGGWATYENNRGFGWYEALNPSEVFGDIMIDYSYVECSSASLTALRAFRARFPGATEPRAAEIDLAVRRGDRFIRSIQRADGSWYGSWAVCFTYGTWFGIKALRAGGATPTDXXXXXXXXXXXXXXXXXXXXXXXXFACVDKAYPPPPQTASIDGPDIGTGGSGVVQTAWAMLALMASGTWDPSLPRHPSLCRPTGAAAALDRGVAFLMDKQLPTGDWAQ-EGITGVFNRSTGITYTAYRNVFPVWALGVYGQ 822
++ RL D +++L+ QN DGGWATYENNRGFG+YE +NPSEVFGDIMIDYSYVECSSAS+TAL AF+ +P R+ EID A++RG RFIRSIQR DGSWYGSW VCFTYGTWFGI+AL G + D +CVDK Y T+ P G GGSGVVQTAWA+L LMA+ LP + A+++G+ +LM Q P GDW Q EGITGVFNRS GITYT YRN+FP+WALG Y +
Sbjct: 1 ISDERLFDCAHLLLTYQNADGGWATYENNRGFGFYEWMNPSEVFGDIMIDYSYVECSSASMTALAAFKKFYP---HHRSKEIDGALKRGARFIRSIQRPDGSWYGSWGVCFTYGTWFGIEALMTAGCSSDDGSVRLAVNFLLSKQNNNGGWGESYRSCVDKVYDGSEVTSIRLQPCYGRGGSGVVQTAWALLGLMAAKV---HLPEEVYV-------HAVEQGIKYLMSMQTPAGDWEQQEGITGVFNRSCGITYTQYRNIFPLWALGRYDE 259
BLAST of mRNA_P-wetherbeei_contig1563.1.1 vs. uniprot
Match: A0A7S2XZ52_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ52_9STRA) HSP 1 Score: 275 bits (703), Expect = 1.170e-89 Identity = 142/265 (53.58%), Postives = 169/265 (63.77%), Query Frame = 1
Query: 22 RLRDAVNVILSLQNHDGGWATYENNRGFGWYEALNPSEVFGDIMIDYSYVECSSASLTALRAFRARFPGATEPRAAEIDLAVRRGDRFIRSIQRADGSWYGSWAVCFTYGTWFGIKALRAGGATPTDXXXXXXXXXXXXXXXXXXXXXXXXFACVDKAYPPPPQTASIDGPDIGTGGSGVVQTAWAMLALMASGTWDPSLPRHPSLCRPTGAAAALDRGVAFLMDKQLPTGDWAQEGITGVFNRSTGITYTAYRNVFPVWALGVY 816
R+ DAVNVI +LQN DGGWATYENNRG+GWYE NPS+VFGDIMIDYSYVECS+A +TAL F+ FP + R++E+ ++ RG +F++SIQR+DGSWYGSW VCFTYGTWFGI+ L A G +CVDKAY T G GSGVVQTAWA+L LM D AA+DRG+ FL ++QLP GDW QE ITGVFNR+ GITYTAYRN+FP+WALG Y
Sbjct: 2 RIFDAVNVIFTLQNDDGGWATYENNRGYGWYEIFNPSDVFGDIMIDYSYVECSTACITALVKFKKYFP---DHRSSEVAKSIARGRKFLKSIQRSDGSWYGSWGVCFTYGTWFGIEGLIASGEDNKSQCIQKALKFLAKQQRPNGGWGESYLSCVDKAYTEEEGTGQY-----GVEGSGVVQTAWALLGLMEGQYED---------------RAAIDRGIEFLKNQQLPNGDWDQEAITGVFNRNCGITYTAYRNIFPIWALGRY 243
BLAST of mRNA_P-wetherbeei_contig1563.1.1 vs. uniprot
Match: D7G8L9_ECTSI (Cycloartenol synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8L9_ECTSI) HSP 1 Score: 276 bits (707), Expect = 2.620e-89 Identity = 145/275 (52.73%), Postives = 170/275 (61.82%), Query Frame = 1
Query: 1 LPAVTAARLRDAVNVILSLQNHDGGWATYENNRGFGWYEALNPSEVFGDIMIDYSYVECSSASLTALRAFRARFPGATEPRAAEIDLAVRRGDRFIRSIQRADGSWYGSWAVCFTYGTWFGIKALRAGGATPTDXXXXXXXXXXXXXXXXXXXXXXXXFACVDKAYPPPP-QTASIDGPDIGTGGSGVVQTAWAMLALMASGTWDPSLPRHPSLCRPTGAAAALDRGVAFLMDKQLPTGDWAQEGITGVFNRSTGITYTAYRNVFPVWALGVYGQ 822
LP ++ RL DAVN++LS QN DGGWATYEN RGF WYE LNPSE FGDIMIDYSYVECS +S+TAL+AF +P + RAAEI ++ G RFIRSIQR DGSWYGSW VCFTY TWFG++ L + G A VDK + Q+ + +G GGSGVV T WAML L+AS W+ AL +G FL QLP GDW QEGITGVFNRSTGITYT+YRNV+P+WALG Y +
Sbjct: 41 LPPISPERLHDAVNILLSYQNRDGGWATYENTRGFRWYETLNPSETFGDIMIDYSYVECSCSSMTALKAFAKTYP---DHRAAEIKRSLSNGRRFIRSIQRPDGSWYGSWGVCFTYATWFGVEGLMSAGEPVESPTITKAVDFMLSRQNANGGWGESYLASVDKGWTETGVQSLQEEVSALGNGGSGVVHTGWAMLTLIASEQWEDR----------EDVRLALWKGSLFLRKMQLPRGDWEQEGITGVFNRSTGITYTSYRNVYPIWALGKYAR 302
BLAST of mRNA_P-wetherbeei_contig1563.1.1 vs. uniprot
Match: A0A6S9IZA0_HETAK (Terpene cyclase/mutase family member (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9IZA0_HETAK) HSP 1 Score: 287 bits (735), Expect = 2.250e-87 Identity = 150/269 (55.76%), Postives = 172/269 (63.94%), Query Frame = 1
Query: 22 RLRDAVNVILSLQNHDGGWATYENNRGFGWYEALNPSEVFGDIMIDYSYVECSSASLTALRAFRARFPGATEPRAAEIDLAVRRGDRFIRSIQRADGSWYGSWAVCFTYGTWFGIKALRAGGATPTDXXXXXXXXXXXXXXXXXXXXXXXXFACVDKAYPPPPQTASIDG--PDIGTGGSGVVQTAWAMLALMASGTWDPSLPRHPSLCRPTGAAAALDRGVAFLMDKQLPTGDWAQEGITGVFNRSTGITYTAYRNVFPVWALGVYGQ 822
RL A ++LS QN DGGWATYENNRG+GWYEALNPS+VFGDIMIDYSYVECS+A L+AL FR FP E RA EI+ A+ RG RF++SIQR DGSWYGSW VCF Y TWFGI+ L G +CVDKAY S G P +G GGSGVVQTAWA+L LM DP + A++RGVA+LM KQL GDW QEG+TGVFNR+ GITYTAYRNVFP+WALG YG+
Sbjct: 621 RLHQAAQILLSYQNRDGGWATYENNRGYGWYEALNPSDVFGDIMIDYSYVECSTACLSALATFRKEFP---EHRAGEIEGALERGRRFVKSIQRPDGSWYGSWGVCFCYATWFGIEGLVVSGEPLDSPHITRAVAFLLSKQRPNGGWGESYLSCVDKAY-------SEGGCLPGLGDGGSGVVQTAWALLGLMEGAPHDPKV------------RTAVNRGVAYLMQKQLADGDWEQEGLTGVFNRNCGITYTAYRNVFPIWALGRYGR 867
BLAST of mRNA_P-wetherbeei_contig1563.1.1 vs. uniprot
Match: A0A7S3ADP3_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ADP3_9EUKA) HSP 1 Score: 270 bits (690), Expect = 9.350e-86 Identity = 142/272 (52.21%), Postives = 169/272 (62.13%), Query Frame = 1
Query: 7 AVTAARLRDAVNVILSLQNHDGGWATYENNRGFGWYEALNPSEVFGDIMIDYSYVECSSASLTALRAFRARFPGATEPRAAEIDLAVRRGDRFIRSIQRADGSWYGSWAVCFTYGTWFGIKALRAGGATPTDXXXXXXXXXXXXXXXXXXXXXXXXFACVDKAYPPPPQTASIDGPDIGTGGSGVVQTAWAMLALMASGTWDPSLPRHPSLCRPTGAAAALDRGVAFLMDKQLPTGDWAQEGITGVFNRSTGITYTAYRNVFPVWALGVYGQ 822
A+T RL A+NV+L+LQN DGGWATYENNRG+GWYE LNPSEVFGDIMIDYSYVECS ASL+A+ AF +P E R E+ ++ G +FI+SIQR DGSWYGSW CFTYGTWFG++ L G +C DKAY A G GGSGVV TAWA+LALMA+GT D A+ RG+ +LM +QLP GDW QEGI GVFNR+ GI+YT YRN+FP+WALG Y +
Sbjct: 136 AITDERLYKALNVLLALQNVDGGWATYENNRGYGWYEWLNPSEVFGDIMIDYSYVECSMASLSAVYAFHQAYP---EHRKDEVVKSIAAGRKFIKSIQREDGSWYGSWGCCFTYGTWFGVEGLVLSGEPAGSDSLRRACNFLLSKQNANGGWGEDFTSCYDKAY------AQAGMQRYGNGGSGVVNTAWALLALMAAGTSDRD---------------AVRRGIQYLMTEQLPNGDWKQEGIAGVFNRACGISYTQYRNIFPMWALGRYAK 383
BLAST of mRNA_P-wetherbeei_contig1563.1.1 vs. uniprot
Match: A0A7S0HVM2_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HVM2_9CRYP) HSP 1 Score: 275 bits (703), Expect = 2.320e-85 Identity = 161/274 (58.76%), Postives = 187/274 (68.25%), Query Frame = 1
Query: 10 VTAARLRDAVNVILSLQNHDGGWATYENNRGFGWYEALNPSEVFGDIMIDYSYVECSSASLTALRAFRARFPGATEPRAAEIDLAVRRGDRFIRSIQRADGSWYGSWAVCFTYGTWFGIKALRAGGATPTDXXXXXXXXXXXXXXXXXXXXXXXXFACVDKAYPPPPQTASIDGPD---IGTGGSGVVQTAWAMLALMASGTWDPSLPRHPSLCRPTGAAAALDRGVAFLMDKQLPTGDWAQEGITGVFNRSTGITYTAYRNVFPVWALGVYGQ 822
++ RL D +++L+ QN DGGWATYENNRGFG+YE +NPSEVFGDIMIDYSYVECSSA +TAL AF+ +P R+ EI A++RG RFIRSIQR DGSWYGSWAVCFTYGTWFGI+AL G + D XXXXXXXXXXXX +CVDKAY DG + G GGSGVVQTAWA+L LMA+ R P R A++ G+ FLM Q GDW QEGITGVFNRS GITYT YRN+FP+WALG Y +
Sbjct: 330 ISDERLFDCAHLLLTYQNADGGWATYENNRGFGFYEWMNPSEVFGDIMIDYSYVECSSACMTALAAFKKFYP---HHRSDEISGALQRGIRFIRSIQRPDGSWYGSWAVCFTYGTWFGIEALTTAGCSADDSSVRRAVKXXXXXXXXXXXXGESYRSCVDKAY---------DGSEEACYGRGGSGVVQTAWALLGLMAARV------RLPEEVR------AVEEGIKFLMSMQTAAGDWEQEGITGVFNRSCGITYTQYRNIFPIWALGRYDE 579
BLAST of mRNA_P-wetherbeei_contig1563.1.1 vs. uniprot
Match: A0A7S1CZC1_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZC1_CYCTE) HSP 1 Score: 265 bits (677), Expect = 2.380e-82 Identity = 136/263 (51.71%), Postives = 168/263 (63.88%), Query Frame = 1
Query: 22 RLRDAVNVILSLQNHDGGWATYENNRGFGWYEALNPSEVFGDIMIDYSYVECSSASLTALRAFRARFPGATEPRAAEIDLAVRRGDRFIRSIQRADGSWYGSWAVCFTYGTWFGIKALRAGGATPTDXXXXXXXXXXXXXXXXXXXXXXXXFACVDKAYPPPPQTASIDGPDIGTGGSGVVQTAWAMLALMASGTWDPSLPRHPSLCRPTGAAAALDRGVAFLMDKQLPTGDWAQEGITGVFNRSTGITYTAYRNVFPVWALG 810
RL +A+NVI++LQN D GWATYENNRGFGW+E LNPSEVFGDIMIDYSYVE + AS+TA+ FR +P R EI+ ++++G F++SIQRADGSWYGSWA CFTYG WFG++ L G P+ +C DKAY P A G GGSGV+ TAWA+LAL + D A+ RG+ FLMD+QLP+GDW Q+GI+GVFNR+ GITYT+YRNVFP+WALG
Sbjct: 257 RLENAINVIITLQNEDNGWATYENNRGFGWFEQLNPSEVFGDIMIDYSYVELTMASMTAIIDFRKLYPN---HRVEEIEHSLQKGRDFMKSIQRADGSWYGSWACCFTYGCWFGVEGLIKAGEDPSCPEIQKACSFLLSHQRENGGWGEDFTSCYDKAYAPHGMKA------YGVGGSGVINTAWALLALSCAQCQD---------------LEAIRRGIKFLMDQQLPSGDWPQQGISGVFNRACGITYTSYRNVFPIWALG 495
BLAST of mRNA_P-wetherbeei_contig1563.1.1 vs. uniprot
Match: A0A835ZEP3_9STRA (Terpene cyclase/mutase family member n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEP3_9STRA) HSP 1 Score: 273 bits (698), Expect = 5.580e-82 Identity = 154/279 (55.20%), Postives = 169/279 (60.57%), Query Frame = 1
Query: 22 RLRDAVNVILSLQNHDGGWATYENNRGFGWYEALNPSEVFGDIMIDYSYVECSSASLTALRAFRARFPGATEPRAAEIDLAVRRGDRFIRSIQRADGSWYGSWAVCFTYGTWFGIKALRAGGATPTDXXXXXXXXXXXXXXXXXXXXXXXX-------FACVDKAYPPPPQTASIDGP-DIGTGGSGVVQTAWAMLALMAS----GTWDPSLPRHPSLCRPTGAAAALDRGVAFLMDKQLPTGDWAQEGITGVFNRSTGITYTAYRNVFPVWALGVYGQ 822
RL DAVNVI SLQN DGGWATYEN RGFGWYE+LNPSEVFGDIMIDYSYVEC+SA +TAL AF R P G F+RSIQRADGSWYGSWAVCFTYGTWFG+ L A AT ACV+KAYP T S G ++G GGSGVVQTAWA+LAL A+ G A RG AFL +QLP GDWAQEGITGVFNRS GI+Y+AYRN+FPVWALGVY +
Sbjct: 617 RLYDAVNVIFSLQNEDGGWATYENTRGFGWYESLNPSEVFGDIMIDYSYVECTSACVTALAAFARRHP---RXXXXXXXXXXXXGGAFLRSIQRADGSWYGSWAVCFTYGTWFGVVGLAAVAATARRPLSAAERGAVARAAAFLLRRQRANGGWGESYLACVNKAYPEADGTRSTSGGGELGAGGSGVVQTAWAVLALAAADLRPGXXXXXXXXXXXXXXXXXXXA---RGAAFLRTRQLPDGDWAQEGITGVFNRSCGISYSAYRNIFPVWALGVYAR 889
BLAST of mRNA_P-wetherbeei_contig1563.1.1 vs. uniprot
Match: A0A7S2R9R7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9R7_9STRA) HSP 1 Score: 259 bits (661), Expect = 1.890e-81 Identity = 158/271 (58.30%), Postives = 184/271 (67.90%), Query Frame = 1
Query: 4 PAVTAARLRDAVNVILSLQNHDGGWATYENNRGFGWYEALNPSEVFGDIMIDYSYVECSSASLTALRAFRARFPGATEPRAAEIDLAVRRGDRFIRSIQRADGSWYGSWAVCFTYGTWFGIKALRAGGATPTDXXXXXXXXXXXXXXXXXXXXXXXXFACVDKAYPPPPQTASIDGPDIGTGGSGVVQTAWAMLALMASGTWDPSLPRHPSLCRPTGAAAALDRGVAFLMDKQLPTGDWAQEGITGVFNRSTGITYTAYRNVFPVWALGVY 816
P+ R DA V+L+LQN DGG+ATYENNRG+GWYE LNPSEVFGDIMIDYSYVEC++AS+ AL AF FP + R E+ A+RR +F+ IQR DGSWYGSW CFTY +WFG++ L G XXXXXXXXXXXXXXXXXXXXXX DKAY P A G GSGVV T WA+L+LMA+G+ D A+ RG+ +LMD+QLP GDW QEGI GVFNR+ GITYTAYRNVFP+WALG Y
Sbjct: 101 PSYPDQRFFDACTVVLTLQNSDGGFATYENNRGYGWYEWLNPSEVFGDIMIDYSYVECTNASIGALAAFHRAFP---DHRTQEVTSAIRRARQFLLDIQRPDGSWYGSWGCCFTYASWFGVEGLLQAGEPQGSPAXXXXXXXXXXXXXXXXXXXXXXXXXXDKAYAPSGMAA------FGDQGSGVVNTGWALLSLMAAGSTD---------------TRAVQRGIQYLMDRQLPDGDWPQEGIAGVFNRACGITYTAYRNVFPIWALGRY 347
BLAST of mRNA_P-wetherbeei_contig1563.1.1 vs. uniprot
Match: B8BV49_THAPS (Terpene cyclase/mutase family member n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BV49_THAPS) HSP 1 Score: 267 bits (683), Expect = 2.030e-81 Identity = 141/267 (52.81%), Postives = 162/267 (60.67%), Query Frame = 1
Query: 10 VTAARLRDAVNVILSLQNHDGGWATYENNRGFGWYEALNPSEVFGDIMIDYSYVECSSASLTALRAFRARFPGATEPRAAEIDLAVRRGDRFIRSIQRADGSWYGSWAVCFTYGTWFGIKALRAGGATPTDXXXXXXXXXXXXXXXXXXXXXXXXFACVDKAYPPPPQTASIDGPDIGTGGSGVVQTAWAMLALMASGTWDPSLPRHPSLCRPTGAAAALDRGVAFLMDKQLPTGDWAQEGITGVFNRSTGITYTAYRNVFPVWALG 810
+ RL DAVNVIL+LQN DGGWATYENNRGFGWYE LNPSEVFGDIMIDYSYVECS ASLTAL F +FP R E+ A+RRG F++SIQR DGSWYGSWA CF YG WFG++ L G + +C DK Y A G GSGVV TAWA++AL A+ A+ RGV +LM +QL +GDW QEGI+GVFNR+ GITYTAYRNVFP+WALG
Sbjct: 426 IDPTRLYDAVNVILTLQNEDGGWATYENNRGFGWYEELNPSEVFGDIMIDYSYVECSMASLTALAEFHEKFP---HHRTKEVTFAIRRGGEFVKSIQREDGSWYGSWACCFCYGCWFGVEGLIKTGEPTSSSAIQKCCEFLLSHQRPNGGWGEDFTSCYDKDY------AENGMKSYGDDGSGVVNTAWALMALSAANC---------------NNVDAIRRGVQYLMKRQLESGDWPQEGISGVFNRACGITYTAYRNVFPIWALG 668 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1563.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1563.1.1 >prot_P-wetherbeei_contig1563.1.1 ID=prot_P-wetherbeei_contig1563.1.1|Name=mRNA_P-wetherbeei_contig1563.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=274bp LPAVTAARLRDAVNVILSLQNHDGGWATYENNRGFGWYEALNPSEVFGDIback to top mRNA from alignment at P-wetherbeei_contig1563:2939..3880- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1563.1.1 ID=mRNA_P-wetherbeei_contig1563.1.1|Name=mRNA_P-wetherbeei_contig1563.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=942bp|location=Sequence derived from alignment at P-wetherbeei_contig1563:2939..3880- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1563:2939..3880- >mRNA_P-wetherbeei_contig1563.1.1 ID=mRNA_P-wetherbeei_contig1563.1.1|Name=mRNA_P-wetherbeei_contig1563.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=822bp|location=Sequence derived from alignment at P-wetherbeei_contig1563:2939..3880- (Phaeothamnion wetherbeei SAG_119_79)back to top |