mRNA_P-wetherbeei_contig15627.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15627.1.1 vs. uniprot
Match: A0A127ENZ7_9HYPH (Ribosomal RNA large subunit methyltransferase H n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127ENZ7_9HYPH) HSP 1 Score: 236 bits (603), Expect = 7.570e-78 Identity = 117/145 (80.69%), Postives = 133/145 (91.72%), Query Frame = 1
Query: 4 ERELAERYRKRAEQVGRRIGFRDVEVIEIRESRAQEVGKRMIEESIALANVIPDKAAIVILDERGDNLDSAALATLLGRWRDDGRSAAVFIIGGDDGLAPSLRDKASLRIAFGAATWPHQLVRAMLLEQVYRAMTILSGHPYHRA 438
ERELAER+RKRAEQ GRR+GFRDVEV+EIRESRAQ+ GKR +EESIAL ++IPDKA I+ILDERG++LDSA LA LGRWRDDGR A VFIIGGDDGLAP+LRDKASL++AFGAATWPHQLVR MLLEQ+YRA +IL+GHPYHRA
Sbjct: 16 ERELAERFRKRAEQSGRRLGFRDVEVVEIRESRAQDTGKRTLEESIALTSIIPDKAIIIILDERGESLDSATLANRLGRWRDDGRPATVFIIGGDDGLAPALRDKASLKLAFGAATWPHQLVRVMLLEQIYRATSILAGHPYHRA 160
BLAST of mRNA_P-wetherbeei_contig15627.1.1 vs. uniprot
Match: A0A346A0D5_9HYPH (Ribosomal RNA large subunit methyltransferase H n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A346A0D5_9HYPH) HSP 1 Score: 211 bits (537), Expect = 8.260e-68 Identity = 105/146 (71.92%), Postives = 124/146 (84.93%), Query Frame = 1
Query: 1 SERELAERYRKRAEQVGRRIGFRDVEVIEIRESRAQEVGKRMIEESIALANVIPDKAAIVILDERGDNLDSAALATLLGRWRDDGRSAAVFIIGGDDGLAPSLRDKASLRIAFGAATWPHQLVRAMLLEQVYRAMTILSGHPYHRA 438
+E EL+ERYRKRA Q GR++G+RDVE++EIRESRA + KRM+EESIALANVIP AA+V+LD RGDNLDS A A L +WR + A VFIIGG DGLAPSL+DKA+LR+AFG ATWPHQ+VRAMLLEQ+YRA TIL+GHPYHRA
Sbjct: 14 AETELSERYRKRAAQTGRQLGWRDVEIVEIRESRADDANKRMLEESIALANVIPQGAAVVLLDARGDNLDSTAFANQLAQWRAADKPATVFIIGGADGLAPSLKDKATLRLAFGTATWPHQMVRAMLLEQIYRAATILTGHPYHRA 159
BLAST of mRNA_P-wetherbeei_contig15627.1.1 vs. uniprot
Match: A0A1Q4DIX2_9HYPH (Ribosomal RNA large subunit methyltransferase H n=1 Tax=Rhizobiales bacterium 64-17 TaxID=1895814 RepID=A0A1Q4DIX2_9HYPH) HSP 1 Score: 202 bits (515), Expect = 1.910e-64 Identity = 102/145 (70.34%), Postives = 120/145 (82.76%), Query Frame = 1
Query: 4 ERELAERYRKRAEQVGRRIGFRDVEVIEIRESRAQEVGKRMIEESIALANVIPDKAAIVILDERGDNLDSAALATLLGRWRDDGRSAAVFIIGGDDGLAPSLRDKASLRIAFGAATWPHQLVRAMLLEQVYRAMTILSGHPYHRA 438
E EL ERYRKRA Q GR +G+RDVE++EIRESRAQ+ +RM+EESIALA+VIPD + +V+LDERGD+LDSAA A L WR + + AA FIIGG DGLAPSLR +A+L +AFGAATWPHQ VR MLLEQ+YRA TIL GHPYHRA
Sbjct: 16 ETELCERYRKRAIQSGRALGWRDVEIVEIRESRAQDAERRMVEESIALASVIPDHSVLVLLDERGDSLDSAAFAGRLAAWRSEAKPAATFIIGGADGLAPSLRQRATLHLAFGAATWPHQFVRIMLLEQLYRAATILGGHPYHRA 160
BLAST of mRNA_P-wetherbeei_contig15627.1.1 vs. uniprot
Match: A0A327K851_9HYPH (Ribosomal RNA large subunit methyltransferase H n=2 Tax=Rhodoplanes piscinae TaxID=444923 RepID=A0A327K851_9HYPH) HSP 1 Score: 199 bits (507), Expect = 3.150e-63 Identity = 104/146 (71.23%), Postives = 118/146 (80.82%), Query Frame = 1
Query: 1 SERELAERYRKRAEQVGRRIGFRDVEVIEIRESRAQEVGKRMIEESIALANVIPDKAAIVILDERGDNLDSAALATLLGRWRDDGRSAAVFIIGGDDGLAPSLRDKASLRIAFGAATWPHQLVRAMLLEQVYRAMTILSGHPYHRA 438
+ERELA+RYR R E+ GR IG R +EVIEIRESRA EV +R +EE+IALANVI D AA V LDERGDNLDSAALA +G WRD GR AVF+IGG DGL +R +A L ++FGAATWPHQLVR MLLEQ+YRA TILSGHPYHRA
Sbjct: 15 AERELADRYRDRLEKAGRGIGLRGIEVIEIRESRAHEVERRRLEEAIALANVIADGAATVALDERGDNLDSAALAGHIGAWRDAGREQAVFVIGGADGLGDEIRRRAGLTLSFGAATWPHQLVRVMLLEQLYRAATILSGHPYHRA 160
BLAST of mRNA_P-wetherbeei_contig15627.1.1 vs. uniprot
Match: A0A371BA86_9HYPH (Ribosomal RNA large subunit methyltransferase H n=2 Tax=unclassified Pseudolabrys TaxID=2638514 RepID=A0A371BA86_9HYPH) HSP 1 Score: 197 bits (500), Expect = 3.540e-62 Identity = 102/144 (70.83%), Postives = 118/144 (81.94%), Query Frame = 1
Query: 4 ERELAERYRKRAEQVGRRIGFRDVEVIEIRESRAQEVGKRMIEESIALANVIPDKAAIVILDERGDNLDSAALATLLGRWRDDGRSAAVFIIGGDDGLAPSLRDKASLRIAFGAATWPHQLVRAMLLEQVYRAMTILSGHPYHR 435
E ELAERY KRA Q GR +G++ VEV+EIRESRA E KRM+EESIALANVIP AA+V+LDE+GD L S A AT L WR++ + A VF+IGG DGLA SLRDKA LR++FG ATWPHQLVRAM+LEQ+YRA TILSGHPYHR
Sbjct: 15 ESELAERYAKRATQSGRSLGWKSVEVVEIRESRADEAMKRMMEESIALANVIPQGAAVVLLDEKGDALGSQAFATELATWRENNKPAVVFMIGGADGLAASLRDKADLRLSFGKATWPHQLVRAMVLEQLYRATTILSGHPYHR 158
BLAST of mRNA_P-wetherbeei_contig15627.1.1 vs. uniprot
Match: A0A0Q7TNU9_9HYPH (Ribosomal RNA large subunit methyltransferase H n=1 Tax=Pseudolabrys sp. Root1462 TaxID=1736466 RepID=A0A0Q7TNU9_9HYPH) HSP 1 Score: 196 bits (499), Expect = 5.030e-62 Identity = 104/145 (71.72%), Postives = 117/145 (80.69%), Query Frame = 1
Query: 4 ERELAERYRKRAEQVGRRIGFRDVEVIEIRESRAQEVGKRMIEESIALANVIPDKAAIVILDERGDNLDSAALATLLGRWRDDGRSAAVFIIGGDDGLAPSLRDKASLRIAFGAATWPHQLVRAMLLEQVYRAMTILSGHPYHRA 438
E ELAERY KRA Q GR +G++ VEVIEIRESRA EV KRM+EESIALANVIP AA+ +LDE+GD L S A AT L WR + A VF+IGG DGLA SLRDKASLR++FG ATWPHQ+VR MLLEQ+YRA TILSGHPYHRA
Sbjct: 15 ESELAERYLKRANQAGRALGWKAVEVIEIRESRADEVMKRMLEESIALANVIPQGAAVALLDEKGDALGSEAFATELATWRGNNVPAVVFMIGGADGLAASLRDKASLRLSFGKATWPHQMVRVMLLEQLYRATTILSGHPYHRA 159
BLAST of mRNA_P-wetherbeei_contig15627.1.1 vs. uniprot
Match: A0A6L5FM77_9HYPH (Ribosomal RNA large subunit methyltransferase H n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FM77_9HYPH) HSP 1 Score: 194 bits (494), Expect = 2.990e-61 Identity = 97/145 (66.90%), Postives = 119/145 (82.07%), Query Frame = 1
Query: 4 ERELAERYRKRAEQVGRRIGFRDVEVIEIRESRAQEVGKRMIEESIALANVIPDKAAIVILDERGDNLDSAALATLLGRWRDDGRSAAVFIIGGDDGLAPSLRDKASLRIAFGAATWPHQLVRAMLLEQVYRAMTILSGHPYHRA 438
ER+LAERY KRA GR++ F ++VIE+RESR+++VGKRMIEESIALAN +PD A+I++LD RG++L S ALA L RW+D GR A F+IGG DGLA SL ++A LR+AFG ATWPHQLVR MLLEQ+YR MTIL+GHPYHRA
Sbjct: 16 ERDLAERYAKRAADAGRQLRFAPIDVIEVRESRSRDVGKRMIEESIALANTVPDGASIIVLDPRGESLGSDALAARLRRWQDGGRPAVTFLIGGPDGLAASLFERAELRLAFGIATWPHQLVRIMLLEQLYRTMTILAGHPYHRA 160
BLAST of mRNA_P-wetherbeei_contig15627.1.1 vs. uniprot
Match: A0A363TYD0_9BRAD (Ribosomal RNA large subunit methyltransferase H n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TYD0_9BRAD) HSP 1 Score: 193 bits (491), Expect = 8.560e-61 Identity = 95/145 (65.52%), Postives = 120/145 (82.76%), Query Frame = 1
Query: 1 SERELAERYRKRAEQVGRRIGFRDVEVIEIRESRAQEVGKRMIEESIALANVIPDKAAIVILDERGDNLDSAALATLLGRWRDDGRSAAVFIIGGDDGLAPSLRDKASLRIAFGAATWPHQLVRAMLLEQVYRAMTILSGHPYHR 435
+ER+L RY +RA + GR IGFR ++++EI ES A++ +RM EESIA+A+VIPD A +V+LDERG+NLDS + A LL RWRD+GR AA F+IGG DG+A +LR +A LR+AFGAATWPHQLVR MLLEQ+YRA+TILSGHPYHR
Sbjct: 15 AERDLVARYHERAVRAGRAIGFRALDLVEIGESPARDAARRMTEESIAIASVIPDGATVVVLDERGENLDSPSFADLLRRWRDNGRPAAAFVIGGPDGIAVTLRQRAELRLAFGAATWPHQLVRVMLLEQLYRAVTILSGHPYHR 159
BLAST of mRNA_P-wetherbeei_contig15627.1.1 vs. uniprot
Match: A0A327L4W9_9HYPH (Ribosomal RNA large subunit methyltransferase H n=2 Tax=Rhodoplanes TaxID=29407 RepID=A0A327L4W9_9HYPH) HSP 1 Score: 192 bits (489), Expect = 1.730e-60 Identity = 97/146 (66.44%), Postives = 118/146 (80.82%), Query Frame = 1
Query: 1 SERELAERYRKRAEQVGRRIGFRDVEVIEIRESRAQEVGKRMIEESIALANVIPDKAAIVILDERGDNLDSAALATLLGRWRDDGRSAAVFIIGGDDGLAPSLRDKASLRIAFGAATWPHQLVRAMLLEQVYRAMTILSGHPYHRA 438
+ER+LAERY R E+ GR IG R +EV+EIR+SRAQEV +R +EE+IALANVIPD AA V+LDE G NLDSA +A + WRD GR AAVF+IGG DGL +R +A + ++FGAATWPHQLVR MLLEQ+YR++TILSGHPYHRA
Sbjct: 15 AERDLAERYLDRLEKAGRAIGLRGIEVVEIRDSRAQEVERRRLEEAIALANVIPDGAAAVVLDEHGRNLDSATIAGEIRGWRDSGREAAVFVIGGADGLGAEIRRRADVTLSFGAATWPHQLVRVMLLEQLYRSVTILSGHPYHRA 160
BLAST of mRNA_P-wetherbeei_contig15627.1.1 vs. uniprot
Match: A0A537SYH3_9PROT (Ribosomal RNA large subunit methyltransferase H n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537SYH3_9PROT) HSP 1 Score: 192 bits (488), Expect = 2.450e-60 Identity = 97/145 (66.90%), Postives = 117/145 (80.69%), Query Frame = 1
Query: 4 ERELAERYRKRAEQVGRRIGFRDVEVIEIRESRAQEVGKRMIEESIALANVIPDKAAIVILDERGDNLDSAALATLLGRWRDDGRSAAVFIIGGDDGLAPSLRDKASLRIAFGAATWPHQLVRAMLLEQVYRAMTILSGHPYHRA 438
ERELAERYRKRA GR++G V+++EI+ESRA++ +RM+EESIA+AN+IPD A VILDERG+ + SAA A L WR G+ A VF IG DGLAPSLR+KASL IAFGAATWPHQL+R MLLEQ+YR +TIL+GHPYHRA
Sbjct: 16 ERELAERYRKRALDAGRKLGLSAVDIVEIKESRARDAARRMLEESIAIANMIPDGAVTVILDERGETMSSAAFAARLQEWRRRGKPAVVFAIGAADGLAPSLREKASLVIAFGAATWPHQLIRIMLLEQLYRGVTILTGHPYHRA 160 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15627.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15627.1.1 >prot_P-wetherbeei_contig15627.1.1 ID=prot_P-wetherbeei_contig15627.1.1|Name=mRNA_P-wetherbeei_contig15627.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=147bp SERELAERYRKRAEQVGRRIGFRDVEVIEIRESRAQEVGKRMIEESIALAback to top mRNA from alignment at P-wetherbeei_contig15627:1..441+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15627.1.1 ID=mRNA_P-wetherbeei_contig15627.1.1|Name=mRNA_P-wetherbeei_contig15627.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=441bp|location=Sequence derived from alignment at P-wetherbeei_contig15627:1..441+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15627:1..441+ >mRNA_P-wetherbeei_contig15627.1.1 ID=mRNA_P-wetherbeei_contig15627.1.1|Name=mRNA_P-wetherbeei_contig15627.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=441bp|location=Sequence derived from alignment at P-wetherbeei_contig15627:1..441+ (Phaeothamnion wetherbeei SAG_119_79)back to top |