mRNA_P-wetherbeei_contig1562.1.4 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1562.1.4
Unique NamemRNA_P-wetherbeei_contig1562.1.4
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1562.1.4 vs. uniprot
Match: D7FTB9_ECTSI (Glucose-6-phosphate 1-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTB9_ECTSI)

HSP 1 Score: 214 bits (545), Expect = 1.650e-61
Identity = 118/235 (50.21%), Postives = 151/235 (64.26%), Query Frame = 3
Query:  126 LAGATVTSFKSSDGTELLFVSEKAVFDGKKAIRGGIPLVFPQFGQPKKAMSSHGFARTSTWNI----GESSPEGDNVTATFTLQDSPETKEVWPHAFRLRYVVSLNATSLTTTLHIENAGDAPFDFQTLLHTYLRVPDIDAVQIEGFKGLMYDDKVAGG-THTEERGKVTFAGEMDRVYKHPEEGKSVPDIVVMGEGSDRIVTVAKSAAKSGGGGGDAAVGADCVLWNPWVDKAK 815
            L GATVTSFK+S G ++LF+SEKAVF+G KAIRGGIPLVFPQFGQP KAM SHG ART+TW++    GE + EG +V A F L  S ET   WPH+F LRY V L A  L+ TLH+ N G+  FDFQ LLHTYL VP+I+  ++ GF+ + Y D++    +  +ER +  F  E+DR+Y        + D+ V+G       TV  S  K+  G  +  V  D VLWNPW+ KAK
Sbjct:   30 LHGATVTSFKTSSGNDVLFLSEKAVFNGAKAIRGGIPLVFPQFGQPDKAMPSHGVARTATWSLSEEEGEPAVEG-HVKANFVLGHSEETLAKWPHSFSLRYEVDLGADVLSVTLHVTNPGEEAFDFQALLHTYLTVPEIEGAKVNGFQNVQYIDQLENNESFKDERPQADFTREVDRIY-----AGEIGDVGVVGG-----TTVTNSCEKTAPGAAEVCVPVDVVLWNPWIAKAK 253          
BLAST of mRNA_P-wetherbeei_contig1562.1.4 vs. uniprot
Match: W7TQG6_9STRA (Glucose-6-phosphate 1-epimerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQG6_9STRA)

HSP 1 Score: 209 bits (531), Expect = 2.570e-59
Identity = 122/262 (46.56%), Postives = 159/262 (60.69%), Query Frame = 3
Query:  132 GATVTSFKSSDGTELLFVSEKAVFDGKKAIRGGIPLVFPQFGQPKKAMSSHGFARTSTWNIGESSPEGDNVTATFTLQDSPETKEVWPHAFRLRYVVSLNATSLTTTLHIENAGDAPFDFQTLLHTYLRVPDIDAVQIEGFKGLMYDDKVAGGT----HTEERGKVTFAGEMDRVYKHPEEGKSVPDIVVMGEGSDRIVTVAKSAAKSGGGGGDAAVGADCVLWNPWVDKAKVKKGPGRRKG---CCLLP-----CYSLAVG 881
            GAT+TS+K +   E+LFVS KA+FDG+KAIRGG+PLVFPQFGQPKK M+ HGFARTS W + +++   D V A F L D+  T+ +WP +F L Y +SL A +LTT+L IEN G+APF+ Q LLHTYLRV DI  V + GF+   + DKVA        TE R  V  A E DRVY+         +I ++  G++R+     +   +  G  +A    DCVLWNPWV K++     G R+     CL P      YSLA G
Sbjct:   36 GATLTSYKPTPEREVLFVSHKALFDGQKAIRGGVPLVFPQFGQPKKEMAQHGFARTSHWELSDTAVTEDVVRAVFHLTDTEITRMLWPFSFLLSYTLSLTAQTLTTSLRIENKGEAPFEAQALLHTYLRVRDIGQVALRGFQHHPFVDKVAAQAVERLPTETRNSVNIAQETDRVYQ-----TGANEITLLEGGAERVKVEYTACTVNRDGSDEALPHPDCVLWNPWVQKSQAMADFGDREFQEMVCLEPGIVSAFYSLAPG 292          
BLAST of mRNA_P-wetherbeei_contig1562.1.4 vs. uniprot
Match: A0A812J2S6_SYMPI (Glucose-6-phosphate 1-epimerase n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812J2S6_SYMPI)

HSP 1 Score: 197 bits (502), Expect = 4.010e-55
Identity = 110/228 (48.25%), Postives = 134/228 (58.77%), Query Frame = 3
Query:  126 LAGATVTSFKSSDGTELLFVSEKAVFDGKKAIRGGIPLVFPQFGQPKKAMSSHGFARTSTWNIGESSPEGDNVTATFTLQDSPETKEVWPHAFRLRYVVSLNATSLTTTLHIENAGDAPFDFQTLLHTYLRVPDIDAVQIEGFKGLMYDDKVAGGTHTEERGKVTFAGEMDRVY---KHPEEGKSVPDIVVMGEGSDRIVTVAKSAAKSGGGGGDAAVGADCVLWNPW 800
            L GAT+TS+K+ DGTE +FVS  A+FDGKKAIRGG+PLVFPQFGQP KAM+ HGFARTS W+I       +  T   TL DS  T+ VW   F L+YVVSL+A SL  TL I+N GDA F FQ LLHTY RVP+I  V + G +G  Y DKV GG    E   V      DRVY   K    G    D+ +   G   +  V      +G     A +  + V+WNP+
Sbjct:   28 LWGATLTSYKTPDGTERIFVSPGALFDGKKAIRGGVPLVFPQFGQPDKAMAQHGFARTSFWSISSIEDHPEASTVILTLADSEATRSVWNFPFSLQYVVSLSAVSLNMTLRIKNTGDAAFPFQALLHTYFRVPNIQEVSVRGLRGRTYLDKVKGGEKAIEAADVELPSFTDRVYTGGKDVGSGDGAKDVTIGQRGGGAMYAVCNQGTIAG-----APMPIEIVVWNPY 250          
BLAST of mRNA_P-wetherbeei_contig1562.1.4 vs. uniprot
Match: A0A813CPA8_9DINO (Glucose-6-phosphate 1-epimerase n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A813CPA8_9DINO)

HSP 1 Score: 192 bits (488), Expect = 4.470e-53
Identity = 109/232 (46.98%), Postives = 135/232 (58.19%), Query Frame = 3
Query:  126 LAGATVTSFKSSDGTELLFVSEKAVFDGKKAIRGGIPLVFPQFGQPKKAMSSHGFARTSTWNIG--ESSPEGDNVTATFTLQDSPETKEVWPHAFRLRYVVSLNATSLTTTLHIENAGDAPFDFQTLLHTYLRVPDIDAVQIEGFKGLMYDDKVAGGTHTEERGKVTFAGEMDRVY---KHPEEGKSVPDIVVMGEGSDRIVTVAKSAAKSGGGGGDAAVGADCVLWNPWVD 806
            L GAT+TS+K++DGTE +FVS  A+FDGKKAIRGG+P+VFPQFGQP KAM+ HGFARTS W++   E SPE   V     L DS  T+ VW   F L YVVSL+A SL  TL I+N GD  F FQ LLHTY RVP++  V + G  G  Y DKV GG    E   V      DRVY   K    G    D+ +   G   +  V    + SG       +  + V+WNP+ +
Sbjct:   28 LWGATLTSYKTADGTERIFVSPGALFDGKKAIRGGVPVVFPQFGQPDKAMAQHGFARTSFWSVASIEDSPEASTVV--LALADSEATRSVWNFPFNLEYVVSLSAVSLKMTLRIKNTGDVAFPFQALLHTYFRVPEVQKVAVRGLGGRTYLDKVKGGEKALEAADVELPSFTDRVYIGGKDIASGNDAKDVTIGQRGGAAMYAVCNEGSISG-----KLMPIEIVVWNPYEE 252          
BLAST of mRNA_P-wetherbeei_contig1562.1.4 vs. uniprot
Match: A0A812MYF9_9DINO (Glucose-6-phosphate 1-epimerase n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812MYF9_9DINO)

HSP 1 Score: 192 bits (489), Expect = 1.550e-49
Identity = 108/232 (46.55%), Postives = 135/232 (58.19%), Query Frame = 3
Query:  126 LAGATVTSFKSSDGTELLFVSEKAVFDGKKAIRGGIPLVFPQFGQPKKAMSSHGFARTSTWNIG--ESSPEGDNVTATFTLQDSPETKEVWPHAFRLRYVVSLNATSLTTTLHIENAGDAPFDFQTLLHTYLRVPDIDAVQIEGFKGLMYDDKVAGGTHTEERGKVTFAGEMDRVY---KHPEEGKSVPDIVVMGEGSDRIVTVAKSAAKSGGGGGDAAVGADCVLWNPWVD 806
            L GAT+TS+K++DGTE +FVS  A+FDGKKAIRGG+P+VFPQFGQP KAM+ HGFARTS W++   E SPE   V     L DS  T+ VW   F L YVVSL+A SL   L I+N GD  F FQ LLHTY RVP++  V + G  G  Y DKV GG    E   V      DRVY   K    G    D+ ++  G   +  V    + SG       +  + V+WNP+ +
Sbjct:   28 LWGATLTSYKTADGTERIFVSPGALFDGKKAIRGGVPVVFPQFGQPDKAMAQHGFARTSFWSVASIEDSPEASTVV--LALADSEATRSVWNFPFNLEYVVSLSAVSLKMALRIKNTGDVAFPFQALLHTYFRVPEVQKVAVRGLGGRTYLDKVKGGEKALEAADVELPSFTDRVYTGGKDTASGNDAKDVTIVQRGGAAMYAVCNEGSISG-----KLMPIEIVVWNPYEE 252          
BLAST of mRNA_P-wetherbeei_contig1562.1.4 vs. uniprot
Match: A0A024TBZ8_9STRA (Glucose-6-phosphate 1-epimerase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TBZ8_9STRA)

HSP 1 Score: 182 bits (463), Expect = 1.660e-49
Identity = 113/241 (46.89%), Postives = 138/241 (57.26%), Query Frame = 3
Query:  126 LAGATVTSFKSSDG-TELLFVSEKAVFDGKKAIRGGIPLVFPQFGQP--KKAMSSHGFARTSTWNIGESSPEGDNVTATFTLQDSPETKEVWPHAFRLRYVVSLNATSLTTTLHIENAGDAPFDFQTLLHTYLRVPD---------IDAVQIEGFKGLMYDDKVAGGTHTEERGKVTFAGEMDRVYKHPEEGKSVPDIVVMGEGSDRIVTVAKSAAKSGGGGGDAAVGADCVLWNPWVDKA 812
            L GATVTSF+ S G T++LFVS+KA+ DG K IRGGIPLVFPQFG       + SHGFARTSTW + ++    D+V ATF+L  +      WPHA RL Y V+L+   LTT+LHI N     +  Q LLHTY  VPD         +  V+I+G  G+ Y  KV   +  E R  VT A E D VYK+  E  +V        G  R V V K A   GGG    AV +D V+WNPW DKA
Sbjct:   26 LYGATVTSFRPSSGATDVLFVSKKALLDGSKPIRGGIPLVFPQFGAGLVPSTLPSHGFARTSTWTLVDTEDFVDSVAATFSLATTKHQLVAWPHAVRLLYTVTLSRNRLTTSLHITNTDTETWGCQALLHTYFLVPDASPSLTSSVLPNVEIDGLGGVEYTCKVRNASLVESRAAVTIASETDSVYKNTSERLTVR------LGESRTVRVEKRAYVVGGG----AVPSDAVVWNPWTDKA 256          
BLAST of mRNA_P-wetherbeei_contig1562.1.4 vs. uniprot
Match: A0A1X2HSV8_SYNRA (Glucose-6-phosphate 1-epimerase n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HSV8_SYNRA)

HSP 1 Score: 180 bits (457), Expect = 7.370e-49
Identity = 108/240 (45.00%), Postives = 138/240 (57.50%), Query Frame = 3
Query:  111 KLLFSLAGATVTSFKSSDGTELLFVSEKAVFDGKKAIRGGIPLVFPQFGQPKKA-MSSHGFARTSTWNIGESSPEGDNVTATFTLQDSP---ETKEVWPHAFRLRYVVSLNATSLTTTLHIENAGDAPFDFQTLLHTYLRVPDIDAVQIEGFKGLMYDDKVAGGT-HTEERGKVTFAGEMDRVYKHPEEGKSVPDIVVMGEGSDRIVTVAKSAAKSGGGGGDAAVGADCVLWNPWVDKAK 815
            K+  +L GATVTS+ S DG E LFVSEKAV DG KAIRGGIPLVFP FG  +K  +  HGFAR S W       + D V   F L+D+    + ++ WPH+FRL Y V+L A SL T L ++N  +  F+F TLLHTY R+PDI  V +EG     Y DKV      TEER KVT A E+DR+Y         PD + +  G    + + K+  K            D V+WNPW++K+K
Sbjct:   19 KVEIALFGATVTSW-SVDGKERLFVSEKAVRDGSKAIRGGIPLVFPIFGTKEKIQLPQHGFARNSYWEYIGLLTDNDEVAVRFALKDNQLDSQLRKGWPHSFRLTYTVTLTAKSLKTVLVVKNEDEDTFEFNTLLHTYFRIPDISKVAVEGLTDRKYIDKVENAAVSTEERAKVTIASEVDRIYC------DAPDSLHLYYGGPDSIAIEKTGLK------------DTVVWNPWIEKSK 239          
BLAST of mRNA_P-wetherbeei_contig1562.1.4 vs. uniprot
Match: A0A7S3HDN3_9STRA (Glucose-6-phosphate 1-epimerase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HDN3_9STRA)

HSP 1 Score: 180 bits (457), Expect = 1.790e-48
Identity = 106/251 (42.23%), Postives = 140/251 (55.78%), Query Frame = 3
Query:  126 LAGATVTSFKSSDGTELLFVSEKAVFDGKKAIRGGIPLVFPQFGQPKKAMSSHGFARTSTWNIGESSPEGDNVTATFTLQDSPETKEVWPHAFRLRYVVSLNATSLTTTLHIENAGDAPFDFQTLLHTYLRVPDIDAVQIEGFKGLMYDDKV---AGGTHTEERGKVTFAGEMDRVYKHPE-------EGKSVPDIVVMGE----GSDRIVTVAKSA-------AKSGGGGGDAAVGADCVLWNPWVDKAK 815
            L GATVTS+K + GTE LF S    FDG  AIRGGIPLVFPQFG+P + M  HGFARTS W +  +  + ++ T    L++S +T  +WPHAF L Y ++L+A  L TT    N G  PF  Q LLHTY+ VP I  V + GF+GL + DK+    G    E R K T   E+DR+Y  P        +  ++  + V+ E    GS+ +++V + A        KS        +  DCVLWN WVDK K
Sbjct:   32 LYGATVTSWKQN-GTEKLFCSPTTPFDGVAAIRGGIPLVFPQFGRPSETMPQHGFARTSNWEVARTDSDANSCTVELILKESDQTLTLWPHAFTLLYTLTLSACGLRTTFRATNTGPTPFQCQALLHTYIAVPRIQNVSVSGFEGLAFHDKMNPPVGDYPVEIRTKATIDREVDRIYLDPATTTDGDGDAFALTTVRVLNERPDEGSEIVLSVDRKAYVKSEREVKS--------LATDCVLWNAWVDKCK 273          
BLAST of mRNA_P-wetherbeei_contig1562.1.4 vs. uniprot
Match: A0A7S3X1I1_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3X1I1_EMIHU)

HSP 1 Score: 178 bits (451), Expect = 2.030e-48
Identity = 91/175 (52.00%), Postives = 110/175 (62.86%), Query Frame = 3
Query:  126 LAGATVTSFKSSDGTELLFVSEKAVFDGKKAIRGGIPLVFPQFGQPKKAMSSHGFARTSTWNIGESSPEGDNVTATFTLQDSPETKEVWPHAFRLRYVVSLNATSLTTTLHIENAGDAPFDFQTLLHTYLRVPDIDAVQIEGFKGLMYDDKVAGG-THTEERGKVTFAGEMDRVY 647
            L GAT+ S+KS DG E +FVS  A+F+G KAIRGG+P+VFPQFGQP  AM  HG ARTSTW + E     +    T TL DS  T++ W +AF L + VSL A SLT TL + N G APFDF  LLHTY RVPDI    + G +G  Y DKVA G +  E   ++      DRVY
Sbjct:   69 LFGATLCSYKSPDGVEHIFVSPGAIFNGAKAIRGGVPVVFPQFGQPDTAMPQHGIARTSTWAVKEIRDSAEEACLTLTLSDSAATRDKWDYAFGLEFAVSLTAVSLTMTLRVANPGPAPFDFHALLHTYFRVPDIGTTVVRGLRGRTYIDKVADGVSRVEAAAEIHLPSFTDRVY 243          
BLAST of mRNA_P-wetherbeei_contig1562.1.4 vs. uniprot
Match: A0A812Z7V8_SYMMI (Glucose-6-phosphate 1-epimerase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Z7V8_SYMMI)

HSP 1 Score: 192 bits (488), Expect = 2.270e-48
Identity = 109/232 (46.98%), Postives = 135/232 (58.19%), Query Frame = 3
Query:  126 LAGATVTSFKSSDGTELLFVSEKAVFDGKKAIRGGIPLVFPQFGQPKKAMSSHGFARTSTWNIG--ESSPEGDNVTATFTLQDSPETKEVWPHAFRLRYVVSLNATSLTTTLHIENAGDAPFDFQTLLHTYLRVPDIDAVQIEGFKGLMYDDKVAGGTHTEERGKVTFAGEMDRVY---KHPEEGKSVPDIVVMGEGSDRIVTVAKSAAKSGGGGGDAAVGADCVLWNPWVD 806
            L GAT+TS+K++DGTE +FVS  A+FDGKKAIRGG+P+VFPQFGQP KAM+ HGFARTS W++   E SPE   V     L DS  T+ VW   F L YVVSL+A SL  TL I+N GD  F FQ LLHTY RVP++  V + G  G  Y DKV GG    E   V      DRVY   K    G    D+ +   G   +  V    + SG       +  + V+WNP+ +
Sbjct: 2200 LWGATLTSYKTADGTERIFVSPGALFDGKKAIRGGVPVVFPQFGQPDKAMAQHGFARTSFWSVASIEDSPEASTVV--LALADSEATRSVWNFPFNLEYVVSLSAVSLKMTLRIKNTGDVAFPFQALLHTYFRVPEVQKVAVRGLGGRTYLDKVKGGEKALEAADVELPSFTDRVYIGGKDIASGNDAKDVTIGQRGGAAMYAVCNEGSISG-----KLMPIEIVVWNPYEE 2424          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1562.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTB9_ECTSI1.650e-6150.21Glucose-6-phosphate 1-epimerase n=2 Tax=Ectocarpus... [more]
W7TQG6_9STRA2.570e-5946.56Glucose-6-phosphate 1-epimerase n=2 Tax=Monodopsid... [more]
A0A812J2S6_SYMPI4.010e-5548.25Glucose-6-phosphate 1-epimerase n=1 Tax=Symbiodini... [more]
A0A813CPA8_9DINO4.470e-5346.98Glucose-6-phosphate 1-epimerase n=2 Tax=Symbiodini... [more]
A0A812MYF9_9DINO1.550e-4946.55Glucose-6-phosphate 1-epimerase n=1 Tax=Symbiodini... [more]
A0A024TBZ8_9STRA1.660e-4946.89Glucose-6-phosphate 1-epimerase n=2 Tax=Aphanomyce... [more]
A0A1X2HSV8_SYNRA7.370e-4945.00Glucose-6-phosphate 1-epimerase n=1 Tax=Syncephala... [more]
A0A7S3HDN3_9STRA1.790e-4842.23Glucose-6-phosphate 1-epimerase n=1 Tax=Spumella e... [more]
A0A7S3X1I1_EMIHU2.030e-4852.00Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
A0A812Z7V8_SYMMI2.270e-4846.98Glucose-6-phosphate 1-epimerase n=1 Tax=Symbiodini... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1562contigP-wetherbeei_contig1562:57..2814 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FTB9
PFAMsAldose_epim
Model size1721
Max annot lvl2759|Eukaryota
KEGG rclassRC00563
KEGG koko:K01792
KEGG ReactionR02739
KEGG Pathwayko00010,ko01100,ko01110,ko01120,ko01130,map00010,map01100,map01110,map01120,map01130
Hectar predicted targeting categoryother localisation
Exons5
Evalue1.43e-64
EggNOG OGsCOG0676@1|root,KOG1594@2759|Eukaryota
EC5.1.3.15
Descriptionglucose-6-phosphate 1-epimerase activity
Cds size1110
COG categoryG
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1562.1.4prot_P-wetherbeei_contig1562.1.4Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1562 92..2238 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186062.0887809-UTR-P-wetherbeei_contig1562:56..911683186062.0887809-UTR-P-wetherbeei_contig1562:56..91Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1562 57..91 +
1683186062.1438136-UTR-P-wetherbeei_contig1562:2238..28141683186062.1438136-UTR-P-wetherbeei_contig1562:2238..2814Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1562 2239..2814 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186062.0980728-CDS-P-wetherbeei_contig1562:91..3071683186062.0980728-CDS-P-wetherbeei_contig1562:91..307Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1562 92..307 +
1683186062.1052704-CDS-P-wetherbeei_contig1562:422..5771683186062.1052704-CDS-P-wetherbeei_contig1562:422..577Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1562 423..577 +
1683186062.1144712-CDS-P-wetherbeei_contig1562:762..9341683186062.1144712-CDS-P-wetherbeei_contig1562:762..934Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1562 763..934 +
1683186062.1247685-CDS-P-wetherbeei_contig1562:1281..13431683186062.1247685-CDS-P-wetherbeei_contig1562:1281..1343Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1562 1282..1343 +
1683186062.1346545-CDS-P-wetherbeei_contig1562:1733..22381683186062.1346545-CDS-P-wetherbeei_contig1562:1733..2238Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1562 1734..2238 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1562.1.4

>prot_P-wetherbeei_contig1562.1.4 ID=prot_P-wetherbeei_contig1562.1.4|Name=mRNA_P-wetherbeei_contig1562.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=370bp
MVRHGTNPCRISEESAIKSSRSNLTKLLFSLAGATVTSFKSSDGTELLFV
SEKAVFDGKKAIRGGIPLVFPQFGQPKKAMSSHGFARTSTWNIGESSPEG
DNVTATFTLQDSPETKEVWPHAFRLRYVVSLNATSLTTTLHIENAGDAPF
DFQTLLHTYLRVPDIDAVQIEGFKGLMYDDKVAGGTHTEERGKVTFAGEM
DRVYKHPEEGKSVPDIVVMGEGSDRIVTVAKSAAKSGGGGGDAAVGADCV
LWNPWVDKAKVKKGPGRRKGCCLLPCYSLAVGSDIAASVAFGFCRSLGCL
GRLIIFLWHTYIYPSLSTPLVDAAAAVTIGDGFAAATGVDAATSADAITV
LATAIQEFIPSLPPHRRRH*
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mRNA from alignment at P-wetherbeei_contig1562:57..2814+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1562.1.4 ID=mRNA_P-wetherbeei_contig1562.1.4|Name=mRNA_P-wetherbeei_contig1562.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2758bp|location=Sequence derived from alignment at P-wetherbeei_contig1562:57..2814+ (Phaeothamnion wetherbeei SAG_119_79)
GCAGACCTCTGGAGCAACTGTCGAAATCGCTCTCTATGGTAAGACATGGG ACGAATCCCTGCCGTATTTCCGAAGAAAGTGCAATTAAGTCGTCCCGGAG CAACCTCACGAAACTTCTCTTCTCCCTTGCAGGCGCGACCGTCACCTCAT TCAAAAGTAGCGATGGCACAGAATTACTTTTCGTCAGCGAGAAGGCCGTC TTCGACGGAAAGAAAGCAATCCGGGGTGGCATCCCTCTGGTTTTCCCTCA GGTAAATAAATGGTGGCGACTGCATTGAACCTCCGTTTTGTCAAAAGCCA TTGCTGCAAACCAGGCTGAAGTCGCTGAGGTTGCATCGTTTTCTTTGAAA CCATTGCTTCCGCCAGTTCGGCCAGCCGAAGAAAGCGATGAGCAGCCACG GCTTCGCGCGGACATCGACATGGAACATCGGCGAGAGCAGCCCGGAGGGC GACAACGTGACGGCCACTTTTACGCTGCAGGACTCGCCCGAGACGAAGGA GGTCTGGCCGCACGCCTTCAGGTGAGGCCTGGCGCGCCTTCTCATTCGAC TTTCATCGGCGGCCCCACCAATCAATTGCAACGTGAGGCGCCCTGATCAC TTTCACCTTATCAACGCGACAAATAGGGTAAGAATTGATGCCTCGATGTC TCGGTTTTACGATGGTAGTGTAATGCTACAATGTACGGGCTCTGCGCGTC GGCCAGGCTGCGCTACGTGGTGTCTCTGAACGCGACGTCCCTGACGACGA CGCTGCACATCGAGAACGCCGGCGACGCGCCGTTCGACTTTCAGACGCTG CTGCACACTTATCTGCGGGTGCCCGACATCGACGCCGTCCAGATTGAGGG CTTCAAGGGCCTCATGTATGACGACAAGGTGTGTCTGCCTGTCTGTCTGT CTGACTTGATTCGTGTTTTCCTATCGGGTTGCTGGCGTGGGCGGTTCTTT CCTGTATTGCCGCAGGCTCGTCTGTAGAGTCAGTTGGTTGCTTGGTAGCT GTACTACTGCTGCGCGTTCCAGAGGTCTTGGAGTCGCCGGCTTACTGCGG GTTTAGATGTGTTGGCGAATTTGTTCTCTTCTCGGTCTCCGTGACGAGTT TAATGGCAACCCTCGACCTCAAACCTCACGCATCATACCGTTCTCCAGGC AGAAAAATCAATGGCGGAAGAGGAAACATACTAACGAACAGTTGCTGCGC TTCGCACGCGACCTCACAATCGCAGGTGGCGGGAGGAACGCACACGGAGG AGCGGGGGAAGGTCACCTTTGCCGGTGAAATGGACCGGTGAGCAAAGTCT GCTTCATCTCTTGTCCCATCAATTTTCCTTTCTCTTTCCTACCTGCTGTT GCGGTTTTGCCAAGCCTTTTGCGGCTCAGCCGAGATGAAACTCATTGGGA TGAAGCGCAAAGCCCATTGAGAAAAGGCGGCAATGGAAGAGGTATGCCTT TGGAAGAAGCGGCGGGAGAAGGGCAGACTGCACTAGGGCATTTTAAGTAT TTGCCAACCCAAAGTGTTTAGGCTCCAAGTTGTCCCGTTTTTCGTTTCTA GTTGAACTCTTTCTTTTCTAGCTGACCCGCCTAGTGGCTGCACAAGCCGT GCTCTCCGTTGCGCTGCCTACCATTCTCATCAGCCCCGTCCCAATTTGCC AACACAACCGCACTTGCCGCGCTGCAGCGTATACAAGCACCCGGAGGAGG GCAAGTCGGTCCCGGACATCGTTGTCATGGGCGAGGGATCGGACCGCATC GTGACGGTCGCCAAGAGCGCTGCCAAGAGCGGCGGCGGCGGCGGAGACGC GGCCGTCGGGGCCGACTGCGTGCTCTGGAACCCGTGGGTGGACAAGGCGA AGGTGAAGAAAGGGCCGGGCCGGCGGAAAGGGTGCTGCTTGCTGCCGTGC TATTCTCTGGCTGTTGGGTCAGACATTGCTGCATCGGTGGCTTTTGGATT TTGCAGATCTTTGGGTTGCCTCGGGCGGCTTATCATCTTTTTGTGGCACA CATACATATATCCCAGCCTTTCTACCCCTCTTGTCGATGCCGCCGCCGCC GTCACCATTGGCGACGGGTTTGCCGCCGCCACCGGCGTAGACGCGGCGAC CAGCGCTGATGCCATCACAGTTCTCGCTACTGCTATCCAGGAATTCATCC CATCGCTACCGCCGCACCGCCGCCGCCATTAATGCCGCCTCCTGCCGCTA ACTGCCCTCGCTGCTGCCGCTGCCTCCGTTCCTACTCAGGCGTTGTCGGA CATGGCGGACGAGGAGTACAAGGTGTTCCTGTGCGTGGAACCGGGGCTAG TCGACGGCTGGCAGACGCTCCAGCCTGGCGAGGCGTGCCGCCTCAGCCAG ACCATCACCGCAAGTCCGTGAGGAAATTAGAACGTCGCCGCGGCCGCCGC CGACGCCTCTGCCGCTGCCGCCGCCGTCCGGGCGACTGTCGGCTTCTGGC TGCCCGCAGGCCGCCTTCTGCTGTATCCCAGCCGGCCGGGAAGATCGCTT CTTTTTGGGGGCTCAGAGGTGGAAATGGTGAAATCTGGGATGGCTAGAGG TTTCCCCGTCGATAGCGGCGGAAAGCAGCCCGCCTGGGCGCGGTGGCGGC GAGGCATATATGCAGAGGGGCAGCACAACAAACCCTCGATCTTGCCAAAG GGTGAGGTAAGTGGCATCGTGGGGAGAAGAGGGATAGTAAGGATCCGACC GAGCGTTCATGTATACGACAAAGTGATAACAAAGGCGAAATATACTCCAA GAAAACGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1562:57..2814+

>mRNA_P-wetherbeei_contig1562.1.4 ID=mRNA_P-wetherbeei_contig1562.1.4|Name=mRNA_P-wetherbeei_contig1562.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1110bp|location=Sequence derived from alignment at P-wetherbeei_contig1562:57..2814+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGTAAGACATGGGACGAATCCCTGCCGTATTTCCGAAGAAAGTGCAAT
TAAGTCGTCCCGGAGCAACCTCACGAAACTTCTCTTCTCCCTTGCAGGCG
CGACCGTCACCTCATTCAAAAGTAGCGATGGCACAGAATTACTTTTCGTC
AGCGAGAAGGCCGTCTTCGACGGAAAGAAAGCAATCCGGGGTGGCATCCC
TCTGGTTTTCCCTCAGTTCGGCCAGCCGAAGAAAGCGATGAGCAGCCACG
GCTTCGCGCGGACATCGACATGGAACATCGGCGAGAGCAGCCCGGAGGGC
GACAACGTGACGGCCACTTTTACGCTGCAGGACTCGCCCGAGACGAAGGA
GGTCTGGCCGCACGCCTTCAGGCTGCGCTACGTGGTGTCTCTGAACGCGA
CGTCCCTGACGACGACGCTGCACATCGAGAACGCCGGCGACGCGCCGTTC
GACTTTCAGACGCTGCTGCACACTTATCTGCGGGTGCCCGACATCGACGC
CGTCCAGATTGAGGGCTTCAAGGGCCTCATGTATGACGACAAGGTGGCGG
GAGGAACGCACACGGAGGAGCGGGGGAAGGTCACCTTTGCCGGTGAAATG
GACCGCGTATACAAGCACCCGGAGGAGGGCAAGTCGGTCCCGGACATCGT
TGTCATGGGCGAGGGATCGGACCGCATCGTGACGGTCGCCAAGAGCGCTG
CCAAGAGCGGCGGCGGCGGCGGAGACGCGGCCGTCGGGGCCGACTGCGTG
CTCTGGAACCCGTGGGTGGACAAGGCGAAGGTGAAGAAAGGGCCGGGCCG
GCGGAAAGGGTGCTGCTTGCTGCCGTGCTATTCTCTGGCTGTTGGGTCAG
ACATTGCTGCATCGGTGGCTTTTGGATTTTGCAGATCTTTGGGTTGCCTC
GGGCGGCTTATCATCTTTTTGTGGCACACATACATATATCCCAGCCTTTC
TACCCCTCTTGTCGATGCCGCCGCCGCCGTCACCATTGGCGACGGGTTTG
CCGCCGCCACCGGCGTAGACGCGGCGACCAGCGCTGATGCCATCACAGTT
CTCGCTACTGCTATCCAGGAATTCATCCCATCGCTACCGCCGCACCGCCG
CCGCCATTAA
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