mRNA_P-wetherbeei_contig1561.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1561.5.1 vs. uniprot
Match: D8LTB9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTB9_ECTSI) HSP 1 Score: 169 bits (427), Expect = 3.770e-50 Identity = 84/136 (61.76%), Postives = 105/136 (77.21%), Query Frame = 1
Query: 55 GAPAXXXXXXSAAEVARQQKVPQLIMFMRLANIGLCGLLATTAILELL-LTPSLQQGVLACYLFAFACVLCCFETHLKVVAKTIAANFGFLYNAKGRAAFMLFVGILCFSFGSVLGYISGVAMLVNGAFNFYVIVK 459
G P +AAE+ RQ KVPQL+++MR+ANI LCG+LA TA+L+L+ + VLACYL AF+C+LCCFETHLKVVAKTIAANFGFLYNAKGRA F++FVG+LCFS S + +++G M+VN FNFYVI K
Sbjct: 31 GLPQQAAAAPTAAELERQAKVPQLMIYMRVANIALCGILAATAVLKLIGAGVDVAGAVLACYLCAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVLCFSLNSDIAFVAGALMMVNAVFNFYVIFK 166
BLAST of mRNA_P-wetherbeei_contig1561.5.1 vs. uniprot
Match: A0A836CFZ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFZ2_9STRA) HSP 1 Score: 154 bits (388), Expect = 5.650e-45 Identity = 73/112 (65.18%), Postives = 92/112 (82.14%), Query Frame = 1
Query: 124 LIMFMRLANIGLCGLLATTAILELLLTPSLQQGVLACYLFAFACVLCCFETHLKVVAKTIAANFGFLYNAKGRAAFMLFVGILCFSFGSVLGYISGVAMLVNGAFNFYVIVK 459
+++ RL N+GLC LL+ TA+LEL+ P+ Q VLA YLFAFAC+LCCFETH+ +A A+NFGFLYNAKGRA F+LFVGILCFSFGS+LGYISG+AM+ + FNF+VI+K
Sbjct: 1 MVILTRLINMGLCVLLSATAVLELIGLPNFQTLVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILK 112
BLAST of mRNA_P-wetherbeei_contig1561.5.1 vs. uniprot
Match: A0A7S4EDS9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EDS9_9STRA) HSP 1 Score: 117 bits (292), Expect = 3.310e-29 Identity = 63/122 (51.64%), Postives = 84/122 (68.85%), Query Frame = 1
Query: 106 QQKVPQ----LIMFMRLANIGLCGLLATTAILELLLTPSLQQGVLACYLFAFACVLCCFETHLKVVAKTIAANFGFLYNAKGRAAFMLFVGILCFSFGSVLGYISGVAMLVNGAFNFYVIVK 459
+QK+PQ LI+ MRL N+G+ L+A AI++LL P+ +GVL Y++ FA ++CCFETHL V++ I NFGFLYN KGR F + V LCFS G ++G ISGV +LV A+N YVI K
Sbjct: 76 EQKLPQTRSGLIISMRLLNMGVSILMAAAAIIKLLSLPAFTKGVLCLYIWFFALLICCFETHLAQVSRIIGENFGFLYNVKGRVTFFILVSFLCFSIG-LIGLISGVGLLVAAAYNAYVIYK 196
BLAST of mRNA_P-wetherbeei_contig1561.5.1 vs. uniprot
Match: W7TT71_9STRA (Golgi apparatus membrane protein TVP15 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TT71_9STRA) HSP 1 Score: 112 bits (280), Expect = 1.640e-27 Identity = 59/120 (49.17%), Postives = 85/120 (70.83%), Query Frame = 1
Query: 112 KVPQLIMFMRLANIGLCGLLATTAILELLL----TPSLQQGVLACYLFAFACVLCCFETHLKVVAKTIAANFGFLYNAKGRAAFMLFVGILCFSFGSVLGYISGVAMLVNGAFNFYVIVK 459
+ P L+++MR+AN LC L++ A+L +++ TP+ VLA Y+ AF+C+LCCFE +L+ VAK IA NFGFLY+AK RA F++FVG+LCFS G + G ++G AM+ N FN V+ K
Sbjct: 78 QTPPLVIYMRVANFALCILMSAAAVLTVIVPAGATPA--SWVLAFYVLAFSCLLCCFEVNLRRVAKHIANNFGFLYDAKSRATFLIFVGVLCFSLG-ITGKVAGAAMIANALFNTVVLCK 194
BLAST of mRNA_P-wetherbeei_contig1561.5.1 vs. uniprot
Match: A0A482T2R9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T2R9_9ARCH) HSP 1 Score: 104 bits (259), Expect = 3.000e-25 Identity = 50/94 (53.19%), Postives = 68/94 (72.34%), Query Frame = 1
Query: 178 TAILELLLTPSLQQGVLACYLFAFACVLCCFETHLKVVAKTIAANFGFLYNAKGRAAFMLFVGILCFSFGSVLGYISGVAMLVNGAFNFYVIVK 459
T++L +L T S GVLACY+ F+C+LCCFETHLK V+K IA NFGF+Y+AK R+ FM+F+G + FSF S+ G I G+ ML N FN + + +
Sbjct: 4 TSLLAVLTTQSATTGVLACYVVVFSCLLCCFETHLKQVSKIIAMNFGFMYSAKSRSLFMIFIGTILFSF-SLFGKIIGLCMLANAGFNLFAVFR 96
BLAST of mRNA_P-wetherbeei_contig1561.5.1 vs. uniprot
Match: A0A7S2XJA4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XJA4_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.100e-18 Identity = 47/136 (34.56%), Postives = 78/136 (57.35%), Query Frame = 1
Query: 55 GAPAXXXXXXSAAEVARQQK-VPQLIMFMRLANIGLCGLLATTAILELLLTPSLQQGVLACYLFAFACVLCCFETHLKVVAKTIAANFGFLYNAKGRAAFMLFVGILCFSFGSVLGYISGVAMLVNGAFNFYVIVK 459
GAP +A + +K +PQ+I+FMRLAN+G+ L +I++++ PS+ +LA Y F ++CC ET LK + IA NFGFL++A R F L + + +++ ++ G I +A+ FN YV+ +
Sbjct: 27 GAPEPAAAPEPSARALQDEKDLPQVILFMRLANMGIAIALVACSIVKMMSFPSISNWILAVYATLFGLLICCLETQLKFLRVVIAVNFGFLFSAPWRFFFYLLLASITWAYNNLFGKIVAIAIAATALFNTYVLFR 162
BLAST of mRNA_P-wetherbeei_contig1561.5.1 vs. uniprot
Match: A0A7S3JYJ7_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYJ7_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 3.510e-17 Identity = 49/119 (41.18%), Postives = 74/119 (62.18%), Query Frame = 1
Query: 112 KVPQLIMFMRLANIGLCGLLATTAILELLL-TPSLQQGVLACYLFAFACVLCCFETHLKVVAKTIAANFGFLYNAKGRAAFMLFVGILCFSFGSV--LGYISGVAMLVNGAFNFYVIVK 459
K+P+ I+ MR+AN+ LLA A L+L T + GV++ YLFAFA ++ FE H+ + K IA N GF+Y A GRA+FM+ +G+LCFS + GY G+ ++V N +++ K
Sbjct: 88 KLPREIVLMRIANLCSAFLLACLAALKLQKNTGDVSSGVISFYLFAFAILIFTFECHVSFLGKVIADNLGFMYQAPGRASFMILLGMLCFSDEPLPGFGYFVGIFVIVTALLNAFIMFK 206
BLAST of mRNA_P-wetherbeei_contig1561.5.1 vs. uniprot
Match: A0A4D9D7K6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7K6_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 5.260e-16 Identity = 50/120 (41.67%), Postives = 73/120 (60.83%), Query Frame = 1
Query: 112 KVPQLIMFMRLANIGLCGLLATTAILELLL----TPSLQQGVLACYLFAFACVLCCFETHLKVVAKTIAANFGFLYNAKGRAAFMLFVGILCFSFGSVLGYISGVAMLVNGAFNFYVIVK 459
+ P L+++MR+AN LC L++ A+L +++ TP+ VLA Y+ +VAK IA NFGFLY+AK RA F++FVG+LCFS G + G ++G AM+ N FN V+ K
Sbjct: 78 QTPPLVIYMRVANFALCILMSAAAVLTVIVPAGATPA--SWVLAFYV---------------LVAKHIANNFGFLYDAKSRATFLIFVGVLCFSLG-ITGKVAGAAMIANALFNTVVLCK 179
BLAST of mRNA_P-wetherbeei_contig1561.5.1 vs. uniprot
Match: B8C7D3_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C7D3_THAPS) HSP 1 Score: 79.3 bits (194), Expect = 3.160e-15 Identity = 43/125 (34.40%), Postives = 74/125 (59.20%), Query Frame = 1
Query: 85 SAAEVARQQKVPQLIMFMRLANIGLCGLLATTAILELLLTPSLQQGVLACYLFAFACVLCCFETHLKVVAKTIAANFGFLYNAKGRAAFMLFVGILCFSFGSVLGYISGVAMLVNGAFNFYVIVK 459
+A + + + +P++++FMRL N+ GLL +I L SL VLA Y F ++CC E ++ + + IA+NFGFLYN R F + +G++ +SFG++LG ++ A++ N YV+ +
Sbjct: 57 TATKESGENNLPKIVLFMRLGNMVAAGLLVFGSIGSLTNIFSLPVMVLAGYGICFGSLICCLEINISFIRQPIASNFGFLYNPFYRLIFYVLMGMVAWSFGTLLGIVASGALMALSLINTYVLCR 181
BLAST of mRNA_P-wetherbeei_contig1561.5.1 vs. uniprot
Match: K3WM18_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WM18_GLOUD) HSP 1 Score: 65.5 bits (158), Expect = 4.550e-10 Identity = 40/111 (36.04%), Postives = 61/111 (54.95%), Query Frame = 1
Query: 133 FMRLANIGLCGLLATTAILELLLTPSLQQGVLACYLFAFACVLCCFETHLKV--VAKTIAANFGFLYNAKGRAAFMLFVGILCFSFGSVLGYISGVAMLVNGAFNFYVIVK 459
+MRLAN+ LL T ++ L PS ++ Y+ A L E H + VA+ + NFGF++ A G+AAF+L + L FS G+ +G + GV V FNF++I +
Sbjct: 51 YMRLANLLCAALLTVTCVIRLFSVPSYAHFLVVIYIMFLAGALVFIENHEQFPSVAEKVKTNFGFMFTAFGKAAFILSISFLAFSQGT-MGVLIGVLFFVLALFNFFLIYR 160 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1561.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1561.5.1 >prot_P-wetherbeei_contig1561.5.1 ID=prot_P-wetherbeei_contig1561.5.1|Name=mRNA_P-wetherbeei_contig1561.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=153bp PPPPPPANWQQPAAAAAPGAPAQPPAAPSAAEVARQQKVPQLIMFMRLANback to top mRNA from alignment at P-wetherbeei_contig1561:6026..6890+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1561.5.1 ID=mRNA_P-wetherbeei_contig1561.5.1|Name=mRNA_P-wetherbeei_contig1561.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=865bp|location=Sequence derived from alignment at P-wetherbeei_contig1561:6026..6890+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1561:6026..6890+ >mRNA_P-wetherbeei_contig1561.5.1 ID=mRNA_P-wetherbeei_contig1561.5.1|Name=mRNA_P-wetherbeei_contig1561.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=459bp|location=Sequence derived from alignment at P-wetherbeei_contig1561:6026..6890+ (Phaeothamnion wetherbeei SAG_119_79)back to top |