mRNA_P-wetherbeei_contig15569.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15569.1.1
Unique NamemRNA_P-wetherbeei_contig15569.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15569.1.1 vs. uniprot
Match: A0A835Z1U5_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1U5_9STRA)

HSP 1 Score: 359 bits (921), Expect = 3.730e-119
Identity = 176/255 (69.02%), Postives = 201/255 (78.82%), Query Frame = 1
Query:    1 RRPVAVKIVRSSEKYYESALIEADILRDINRRGGAGTSLCVRLLGQFDMRGHCCLVFERLGQSVYDYLKLNGYRGFPLELVRELSRQLLEALRFLHGFGLVHTDLKPENILFCDAESAAWNNGDQYGGDGELVLPKSSRIKVIDFGGATYKDDHKSSIVNTRQYRAPEVILGTGWCCPSDLWSLGCIIAEMYQGDLLFETHDNTEHIALIERCVGPFPPRMVERSRVGHKYFDSRGRARGAKAGRKESQERIRRM 765
            RR VAVK+VR  ++Y+ESALIEADILRD+NR GGAG +LCVRLL QFD RGHCCLVFER+G S+YD LK N YRGFPL  VR+ +RQLLEA+ FLH  GLVHTDLKPEN+L CD E      G        L+LP S+RIKVIDFGGATY DDHKS+ VNTRQYRAPEVILG GWC PSDLWS GCI+AE+YQG+LLF THDN EH+AL+ERCVGPFP  MV  S VG KYFDSRG +R  +A  ++S+  IRRM
Sbjct:  211 RRTVAVKVVRRVKRYHESALIEADILRDVNRAGGAGAALCVRLLDQFDARGHCCLVFERMGPSLYDVLKRNDYRGFPLRYVRDFARQLLEAVAFLHSMGLVHTDLKPENVLLCDLELEP-ERGRYKDDQDALMLPVSTRIKVIDFGGATYVDDHKSATVNTRQYRAPEVILGVGWCRPSDLWSCGCIVAELYQGELLFATHDNMEHLALMERCVGPFPRHMVRASPVGAKYFDSRGVSRWRRACPEDSRAHIRRM 464          
BLAST of mRNA_P-wetherbeei_contig15569.1.1 vs. uniprot
Match: A0A7S1BLV6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BLV6_9STRA)

HSP 1 Score: 290 bits (742), Expect = 2.560e-94
Identity = 146/253 (57.71%), Postives = 187/253 (73.91%), Query Frame = 1
Query:   10 VAVKIVRSSEKYYESALIEADILRDINRRGGAGTSLCVRLLGQFDMRGHCCLVFERLGQSVYDYLKLNGYRGFPLELVRELSRQLLEALRFLHGFGLVHTDLKPENILFCDAESAAWNNGDQYGGDGELVLPKSSRIKVIDFGGATYKDDHKSSIVNTRQYRAPEVILGTGWCCPSDLWSLGCIIAEMYQGDLLFETHDNTEHIALIERCVGPFPPRMVER-SRVGHKYFDSRGRARGAKAGRKESQERIRRM 765
            VA+KIVR   +Y+ESA IEADILRD+N RGG G  LCVR+   F+ +GH CLVFE LG+S+YD+LK + YR FPL  V++ + QLL+AL FLHGF L+HTDLKPENIL    +  ++ N     G  E+  P S++IKVIDFGGATY ++ KSSIVNTRQYRAPEVIL  GW  PSDLWS GCI+AE+Y G+LLF THDN EH+AL+ER +G FP  M++R S +  + FD+RGR R  +   ++S+E +R+M
Sbjct:   65 VAIKIVRDVRRYHESAKIEADILRDVNGRGGRGVGLCVRMFRSFNFKGHYCLVFESLGRSLYDFLKRHDYRPFPLYCVKDFASQLLDALDFLHGFHLIHTDLKPENILLTTNKEVSYKN---VNGVVEIA-PASTKIKVIDFGGATYDNEKKSSIVNTRQYRAPEVILDLGWSMPSDLWSAGCILAELYGGELLFATHDNVEHLALMERLLGAFPGVMLDRASEMARRCFDARGRHRWERMLGEDSREHVRQM 313          
BLAST of mRNA_P-wetherbeei_contig15569.1.1 vs. uniprot
Match: A0A8J9X752_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X752_PHATR)

HSP 1 Score: 290 bits (742), Expect = 2.810e-94
Identity = 138/248 (55.65%), Postives = 180/248 (72.58%), Query Frame = 1
Query:   10 VAVKIVRSSEKYYESALIEADILRDINRRGGAGTSLCVRLLGQFDMRGHCCLVFERLGQSVYDYLKLNGYRGFPLELVRELSRQLLEALRFLHGFGLVHTDLKPENILFCDAESAAWNNGDQYGGDGELVLPKSSRIKVIDFGGATYKDDHKSSIVNTRQYRAPEVILGTGWCCPSDLWSLGCIIAEMYQGDLLFETHDNTEHIALIERCVGPFPPRMVERS------------RVGHKYFDSRGRAR 717
            VA+K+VR   +YYESALIEA I+R +NRRGG G S CV L   F  +GH C+VFE LG S+YD++KL+ Y+ FP+E V++ + QLLE L FLH F L+HTDLK EN+L  +A   ++++GD+     +  +P S+RIKVIDFGGA Y ++ KS+++NTRQYRAPEVILGTGW  PSD+WS GCI+AE+YQG+LLF THDN EH+ALIER +GPFP  +VER+            R   + FDS+GR R
Sbjct:   51 VAIKVVRDVPRYYESALIEAKIVRQVNRRGGRGLSHCVNLHDAFTFQGHYCIVFESLGPSLYDFMKLHNYKSFPMECVQDFAIQLLETLEFLHSFRLIHTDLKIENVLLMNAREVSFSHGDRRH---QQYVPASTRIKVIDFGGACYDEEKKSTVINTRQYRAPEVILGTGWSMPSDIWSTGCILAELYQGELLFSTHDNLEHLALIERTLGPFPRHLVERAKKLGGSSDSSSRRFAREAFDSKGRHR 295          
BLAST of mRNA_P-wetherbeei_contig15569.1.1 vs. uniprot
Match: F0YT33_AURAN (Protein kinase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YT33_AURAN)

HSP 1 Score: 278 bits (710), Expect = 5.020e-90
Identity = 145/242 (59.92%), Postives = 173/242 (71.49%), Query Frame = 1
Query:    1 RRPVAVKIVRSSEKYYESALIEADILRDINRR---GGAGTSLCVRLLGQFDMRGHCCLVFERLGQSVYDYLKLNGYRGFPLELVRELSRQLLEALRFLHGFGLVHTDLKPENILFCDAESAAWNNGDQYGGDGELVLPKS-SRIKVIDFGGATYKDDHKSSIVNTRQYRAPEVILGTGWCCPSDLWSLGCIIAEMYQGDLLFETHDNTEHIALIERCVGPFPPRMVERSRVGHKYFDSRGRA 714
            RR VA+K+VR  E+Y ESA +EA+ILRD+NR    GGAG  LCV+LL  F+ +GH CLVFE+ G S+YD+LK + Y  F    VR +SRQLLEALRFLHG  LVHTDLK EN+L   +  AA    D+    G + L    + I VIDFGGATY D+ KSSIVNTRQYRAPEVIL  GW  PSDLWS GCI+AE+ +G+LLF TH NTEH+ALIERCVGPFP  +V +SR   KYFD   R+
Sbjct:   19 RRRVALKVVRRIERYTESAAVEAEILRDVNRAAAGGGAGGGLCVKLLDTFEFQGHFCLVFEKAGTSLYDFLKGHDYAPFGPRTVRAVSRQLLEALRFLHGLRLVHTDLKLENVLLRRSGVAAPPLDDR----GRIELADGDAAIVVIDFGGATYDDERKSSIVNTRQYRAPEVILNLGWSTPSDLWSAGCIVAELGRGELLFATHSNTEHLALIERCVGPFPRALVAKSRYAAKYFDGDARS 256          
BLAST of mRNA_P-wetherbeei_contig15569.1.1 vs. uniprot
Match: A0A1E7F9Y9_9STRA (Kinase-like protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F9Y9_9STRA)

HSP 1 Score: 279 bits (714), Expect = 9.810e-90
Identity = 135/236 (57.20%), Postives = 172/236 (72.88%), Query Frame = 1
Query:   10 VAVKIVRSSEKYYESALIEADILRDINRRGGAGTSLCVRLLGQFDMRGHCCLVFERLGQSVYDYLKLNGYRGFPLELVRELSRQLLEALRFLHGFGLVHTDLKPENILFCDAESAAWNNGDQYGGDGELVLPKSSRIKVIDFGGATYKDDHKSSIVNTRQYRAPEVILGTGWCCPSDLWSLGCIIAEMYQGDLLFETHDNTEHIALIERCVGPFPPRMVERSR---VGHKYFDSRG 708
            VA+KIVR+ ++YYESA+IEADI++D+NRRG  G + C  L   F   GH C+V E LG S+YD+LK   Y  FP+  VR+ + QLLE L +LH F L+HTDLKPENIL          NG +    G   +P+S+RIKVIDFGGATY ++ KS+IVNTRQYRAPEVIL  GW CPSDLWS+GCI+AE+YQG+LLF THDN EH+ALIE+ +GPFP RM++R++   +  + FDS G
Sbjct:   83 VAIKIVRNVKRYYESAIIEADIIKDVNRRGRRGRTHCSILYDTFSFHGHYCMVLESLGPSLYDFLKGQKYHPFPIYCVRDFAEQLLETLEYLHSFRLIHTDLKPENILLL--------NGREIPQRGGYSIPESTRIKVIDFGGATYDNEKKSTIVNTRQYRAPEVILNVGWGCPSDLWSVGCILAELYQGELLFATHDNIEHLALIEQMIGPFPRRMLKRAKNVELVDEAFDSNG 310          
BLAST of mRNA_P-wetherbeei_contig15569.1.1 vs. uniprot
Match: A0A7S3QFB1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QFB1_9STRA)

HSP 1 Score: 293 bits (751), Expect = 1.390e-89
Identity = 142/235 (60.43%), Postives = 184/235 (78.30%), Query Frame = 1
Query:   10 VAVKIVRSSEKYYESALIEADILRDINRRGGAGTSLCVRLLGQFDM-RGHCCLVFERLGQSVYDYLKLNGYRGFPLELVRELSRQLLEALRFLHGFGLVHTDLKPENILFCDAESAAWNNGDQYGGDGELVLPKSSRIKVIDFGGATYKDDHKSSIVNTRQYRAPEVILG-TGWCCPSDLWSLGCIIAEMYQGDLLFETHDNTEHIALIERCVGPFPPRMVERSRVGHKYFDSRG 708
            VA+KIVR+ ++Y+ESALIEADIL+D+NRRGG G SLCV +L  FD+ RGHCCLVFE LG+S+YD++K +G++ FPL  VR+ +RQ+L+AL F+H FGL+HTDLKPENI+    +  ++   D  G D ++  P S+ IK+IDFGGATY +D KSS++NTRQYRAPEVILG  GW  PSDLWS GCI+AE+Y+GDLLF+THDNTEH+ALIE+ +G FP  M+ RS+     FD  G
Sbjct:  652 VAIKIVRNVKRYHESALIEADILKDVNRRGGRGRSLCVVMLRHFDLQRGHCCLVFECLGRSLYDFMKTHGFKPFPLFCVRDFARQILDALDFIHSFGLIHTDLKPENIMLVSNKERSYRCND--GSDQQI--PASTCIKLIDFGGATYDNDKKSSVINTRQYRAPEVILGLNGWSLPSDLWSTGCIVAELYKGDLLFQTHDNTEHLALIEKIIGRFPLNMLRRSKNIGSTFDVYG 882          
BLAST of mRNA_P-wetherbeei_contig15569.1.1 vs. uniprot
Match: A0A4D9CUL9_9STRA (Protein kinase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUL9_9STRA)

HSP 1 Score: 287 bits (735), Expect = 4.570e-89
Identity = 149/261 (57.09%), Postives = 187/261 (71.65%), Query Frame = 1
Query:    4 RPVAVKIVRSSEKYYESALIEADILRDINRRGGAGTSLCVRLLGQFDMRGHCCLVFERLGQSVYDYLKLNGYRGFPL-ELVRELSRQLLEALRFLHGFGLVHTDLKPENILFCDAESAAWNNGDQYGGDGELVLPKSSRIKVIDFGGATYKDD-HKSSIVNTRQYRAPEVILGTGWCCPSDLWSLGCIIAEMYQGDLLFETHDNTEHIALIERCVGPFPPRMVERSR-VGHKYFD----SRGRARGAKAGRKESQERIRRM 765
            R VAVK+VRS  +Y ESAL+EADIL  +N  GG G S CV+L   F  + HCCLVFERLG S+YD++K + Y+ +PL   VR+ +RQLLEAL FL G  LVHTDLKPEN+L C    A    G +       ++P S+++KVIDFGGAT+ DD  KS+I+NTRQYRAPEVIL  GW  PSDLWS+GCIIAE+Y+GD+LF TH+NTEH+AL+ERC+GPFP  M+E SR V  K+FD     +GR+R  +    ESQ  +RRM
Sbjct:  418 REVAVKVVRSIPRYTESALVEADILGAVNEAGGRGLSHCVQLFRDFVFQEHCCLVFERLGTSLYDFMKAHDYQPYPLFPHVRDFARQLLEALEFLEGLRLVHTDLKPENVLLCGTGEATQEKGGR-----PFLVPASTKVKVIDFGGATFDDDARKSTIINTRQYRAPEVILEIGWSYPSDLWSVGCIIAELYKGDVLFATHNNTEHLALMERCLGPFPRHMLEESREVAPKFFDMSPQGKGRSRWREDLDAESQRHVRRM 673          
BLAST of mRNA_P-wetherbeei_contig15569.1.1 vs. uniprot
Match: A0A7S4E8R3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E8R3_9STRA)

HSP 1 Score: 276 bits (706), Expect = 2.020e-88
Identity = 148/260 (56.92%), Postives = 176/260 (67.69%), Query Frame = 1
Query:    1 RRPVAVKIVRSSEKYYESALIEADILRDINR----RGGAGTSLCVRLLGQFDMRGHCCLVFERLGQSVYDYLKLNGYRGFPLELVRELSRQLLEALRFLHGFGLVHTDLKPENILFCDAESAAWNNGDQYGGDGELVLPKSSR-IKVIDFGGATYKDDHKSSIVNTRQYRAPEVILGTGWCCPSDLWSLGCIIAEMYQGDLLFETHDNTEHIALIERCVGPFPPRMVERSRVGHKYFDSRGRARGAKAGRKESQERIRRM 765
            RR VA+K+VR  E+Y ESA +EA+ILRD+N      G  G  LCV+L   F+ RGH CL FER G S+YDYLK N YR F  + VR +SRQLLEALRFLH   LVHTDLK EN+L             Q   DG   L +    I VIDFGGATY D+ KSSIVNTRQYRAPEVIL  GW  PSDLWS GCI+AE+ +G+LLF TH NTEH+ALIER VGPFP  +V+RSR   KYFDS  R+   +A  ++ ++ +RRM
Sbjct:   93 RRRVALKVVRRIERYTESAAVEAEILRDVNATARANGEEGGRLCVQLFETFEFRGHYCLAFERAGTSLYDYLKGNSYRPFARDTVRRISRQLLEALRFLHAMKLVHTDLKLENVLLRKLGVKK----PQPDSDGRCQLGRDEADIVVIDFGGATYDDERKSSIVNTRQYRAPEVILNLGWSTPSDLWSAGCIVAELGKGELLFATHSNTEHLALIERAVGPFPRALVQRSRYATKYFDSDARSTWEQALPRDGRDHVRRM 348          
BLAST of mRNA_P-wetherbeei_contig15569.1.1 vs. uniprot
Match: A0A6H5L2A1_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A1_9PHAE)

HSP 1 Score: 286 bits (731), Expect = 3.070e-88
Identity = 145/262 (55.34%), Postives = 187/262 (71.37%), Query Frame = 1
Query:    4 RPVAVKIVRSSEKYYESALIEADILRDIN------RRGGAGTSLCVRLLGQFDMRGHCCLVFERLGQSVYDYLKLNGYRGFPLELVRELSRQLLEALRFLHGFGLVHTDLKPENILFCDAESAAWNNGDQYGGDGELV-LPKSSRIKVIDFGGATYKDDHKSSIVNTRQYRAPEVILGTGWCCPSDLWSLGCIIAEMYQGDLLFETHDNTEHIALIERCVGPFPPRMVERSRVGHKYFD-SRGRARGAKAGRKESQERIRRM 765
            R VAVK+VR   KY+ESALIEA ILRD+N      RR    TSLCV +  QF+ +GHCCLVFE LG+S+YDYLK N YRGFP++++R +SR+LL+A+ FLH   L+HTDLKPEN+L       +W +       G+++ +P + RIKVIDFGGATY+ D  +S+VNTRQYRAPEVILG  W  PSDLWS+GCIIAE++ GDLLF TH N EH+AL+E+CVG FPP M+ ++     +FD + G  +GA     E++  IRRM
Sbjct:  446 RRVAVKVVRKVAKYHESALIEAQILRDVNLRERSTRRNTIDTSLCVEMFAQFEHQGHCCLVFECLGRSLYDYLKKNDYRGFPIDVLRSISRELLQAVEFLHSIKLIHTDLKPENVLL-----KSWEDRSVTLESGDVIRVPVNPRIKVIDFGGATYEHDSHASVVNTRQYRAPEVILGLRWLYPSDLWSVGCIIAELFLGDLLFATHHNLEHLALMEKCVGLFPPNMLLKAPRSRDFFDLTSGLCKGATECDSENRRHIRRM 702          
BLAST of mRNA_P-wetherbeei_contig15569.1.1 vs. uniprot
Match: A0A448ZE13_9STRA (Protein kinase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZE13_9STRA)

HSP 1 Score: 281 bits (720), Expect = 2.850e-87
Identity = 132/222 (59.46%), Postives = 164/222 (73.87%), Query Frame = 1
Query:   10 VAVKIVRSSEKYYESALIEADILRDINRRGGAGTSLCVRLLGQFDMRGHCCLVFERLGQSVYDYLKLNGYRGFPLELVRELSRQLLEALRFLHGFGLVHTDLKPENILFCDAESAAWNNGDQYGGDGELVLPKSSRIKVIDFGGATYKDDHKSSIVNTRQYRAPEVILGTGWCCPSDLWSLGCIIAEMYQGDLLFETHDNTEHIALIERCVGPFPPRMVERS 675
            VA+KIVR+ ++YY+SA IEADI+ D+NR+G  G + C  L   F  RGH C+VFE LG S+YD+LK   Y  FP+  V + +RQLLE L FLH F L+HTDLKPENIL  D  + +   G          +P+S+RIKVIDFGGATY D+ K SIVNTRQYRAPEVILG GW  PSDLWS+GCI+AE+YQG+LLF THDNTEH+ALIE+ VGPFP  M++++
Sbjct:  387 VAIKIVRNIQRYYDSAKIEADIVEDVNRKGKRGVTHCAVLYDTFSFRGHYCMVFESLGPSLYDFLKGQNYHPFPIHCVFDFARQLLETLEFLHSFRLIHTDLKPENILLVDGRTISQRGGHS--------IPQSTRIKVIDFGGATYDDEKKGSIVNTRQYRAPEVILGVGWSMPSDLWSIGCILAELYQGELLFATHDNTEHLALIEKVVGPFPRAMLKKA 600          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15569.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z1U5_9STRA3.730e-11969.02Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A7S1BLV6_9STRA2.560e-9457.71Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A8J9X752_PHATR2.810e-9455.65Hypothetical protein n=2 Tax=Phaeodactylum tricorn... [more]
F0YT33_AURAN5.020e-9059.92Protein kinase domain-containing protein (Fragment... [more]
A0A1E7F9Y9_9STRA9.810e-9057.20Kinase-like protein (Fragment) n=1 Tax=Fragilariop... [more]
A0A7S3QFB1_9STRA1.390e-8960.43Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A4D9CUL9_9STRA4.570e-8957.09Protein kinase domain-containing protein n=1 Tax=N... [more]
A0A7S4E8R3_9STRA2.020e-8856.92Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6H5L2A1_9PHAE3.070e-8855.34Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A448ZE13_9STRA2.850e-8759.46Protein kinase domain-containing protein n=1 Tax=P... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15569contigP-wetherbeei_contig15569:8..1492 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2850.Phatr14003
PFAMsPkinase
Model size765
Max annot lvl2836|Bacillariophyta
KEGG koko:K08823
Hectar predicted targeting categoryother localisation
Exons3
Evalue4.61e-95
EggNOG OGsKOG0667@1|root,KOG0671@2759|Eukaryota,2XFMN@2836|Bacillariophyta
EC2.7.12.1
DescriptionBelongs to the protein kinase superfamily
Cds size765
COG categoryT
BRITEko00000,ko01000,ko01001,ko03041
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186060.3236775-CDS-P-wetherbeei_contig15569:7..4311683186060.3236775-CDS-P-wetherbeei_contig15569:7..431Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15569 8..431 +
1683186060.3390775-CDS-P-wetherbeei_contig15569:810..9861683186060.3390775-CDS-P-wetherbeei_contig15569:810..986Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15569 811..986 +
1683186060.3621635-CDS-P-wetherbeei_contig15569:1327..14921683186060.3621635-CDS-P-wetherbeei_contig15569:1327..1492Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15569 1328..1492 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15569.1.1prot_P-wetherbeei_contig15569.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15569 8..1492 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15569.1.1

>prot_P-wetherbeei_contig15569.1.1 ID=prot_P-wetherbeei_contig15569.1.1|Name=mRNA_P-wetherbeei_contig15569.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=255bp
RRPVAVKIVRSSEKYYESALIEADILRDINRRGGAGTSLCVRLLGQFDMR
GHCCLVFERLGQSVYDYLKLNGYRGFPLELVRELSRQLLEALRFLHGFGL
VHTDLKPENILFCDAESAAWNNGDQYGGDGELVLPKSSRIKVIDFGGATY
KDDHKSSIVNTRQYRAPEVILGTGWCCPSDLWSLGCIIAEMYQGDLLFET
HDNTEHIALIERCVGPFPPRMVERSRVGHKYFDSRGRARGAKAGRKESQE
RIRRM
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mRNA from alignment at P-wetherbeei_contig15569:8..1492+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15569.1.1 ID=mRNA_P-wetherbeei_contig15569.1.1|Name=mRNA_P-wetherbeei_contig15569.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1485bp|location=Sequence derived from alignment at P-wetherbeei_contig15569:8..1492+ (Phaeothamnion wetherbeei SAG_119_79)
CGCCGCCCGGTCGCCGTGAAGATCGTCCGATCCAGCGAGAAGTACTATGA GTCGGCGCTCATCGAGGCGGACATCCTGCGGGACATAAACCGGCGCGGCG GCGCCGGCACGTCGCTCTGCGTGCGCCTCCTCGGTCAGTTCGACATGCGC GGCCACTGCTGCCTCGTCTTCGAGCGCCTCGGCCAGTCCGTCTACGATTA CCTGAAGCTCAACGGCTATCGGGGCTTCCCGCTGGAGCTGGTGCGGGAGC TGTCTCGCCAGCTGCTCGAGGCGTTGCGCTTCTTGCACGGCTTCGGGCTG GTGCACACGGACCTGAAGCCCGAGAATATTCTGTTCTGCGACGCTGAATC TGCCGCGTGGAACAACGGCGACCAGTACGGCGGCGATGGCGAGCTCGTCC TGCCCAAGTCCTCCCGCATCAAAGGTGCGCGGAAGACAGGGCTTCGACAT GGCCTGCTGCTGCTTCGTTTCCTCCGTGGAGCTGCTGCTGCTAAGAAAGT TTTTGTTTCCTTTTTCTGGTTTTGGATCCACTCTTCAGAGGTGAAATCGT TCGGATAGCACCTGCGCCGGTCTCCGCTCGCGGCGGCTCCGCCGTTCACC GGACAGCGCCTCCTCTGTTCCCGGCAGGTTCCACGCCTTGCTCTGCTTTT CAGCCCCTTTCAGACTTGTTCTGCCCCTCCTGCTCCTCCATTTCCGCCTG CTTTTCTGACATGACTGATTTCCGTCGTTGCCGTCTCGCACTGCTCGCCT CACGCTGCATCATCGCCCGCCCGCTTTCCCGCCTGCCCGTCTCCTCGCCG CAGTGATCGACTTTGGTGGGGCGACGTACAAGGATGACCACAAGAGTTCC ATCGTCAACACGCGGCAGTACCGCGCCCCTGAGGTGATTCTGGGCACAGG CTGGTGCTGCCCGTCCGACCTGTGGTCGCTCGGCTGCATCATCGCCGAAA TGTACCAGGGGGACCTCCTCTTTGAGACGGTGAGCGAACGAAGCAAGGCC GAGGCTAGAGCGAAGTTGATGGCATTGGGCAGAGAAGCGGACGCCCAATG GTGATGCTTGCCTTATTTTCCTTTCTTCGGGCCGTGATGGAGGCTTATTT GTCTGCCGTTTCTCTTCATGTGCGTTTCTAGGTTTTTCCCCCCCTGTATT CTTTCTGTATTTACTCTCAACCTAGGAGCAGGGGGTTAACGGCTGCCTTA GTTTCAATTACGTTTACGGCAGATCGCCCTTTACAGCGCGCGCACAGACA TAGCCACCTTTCTTCTCGTTGAATCCCGCCAGTCGATCGACCATGCAACA CTTTTCTCGCCCCGCAACAGCACGATAACACGGAGCACATCGCCCTGATC GAGCGCTGCGTGGGACCATTCCCACCGCGCATGGTGGAGCGGTCCCGCGT GGGCCACAAGTACTTCGACAGCCGCGGACGGGCGCGCGGCGCCAAGGCGG GCCGCAAGGAAAGCCAGGAGCGCATCCGCCGCATG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15569:8..1492+

>mRNA_P-wetherbeei_contig15569.1.1 ID=mRNA_P-wetherbeei_contig15569.1.1|Name=mRNA_P-wetherbeei_contig15569.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=765bp|location=Sequence derived from alignment at P-wetherbeei_contig15569:8..1492+ (Phaeothamnion wetherbeei SAG_119_79)
CGCCGCCCGGTCGCCGTGAAGATCGTCCGATCCAGCGAGAAGTACTATGA
GTCGGCGCTCATCGAGGCGGACATCCTGCGGGACATAAACCGGCGCGGCG
GCGCCGGCACGTCGCTCTGCGTGCGCCTCCTCGGTCAGTTCGACATGCGC
GGCCACTGCTGCCTCGTCTTCGAGCGCCTCGGCCAGTCCGTCTACGATTA
CCTGAAGCTCAACGGCTATCGGGGCTTCCCGCTGGAGCTGGTGCGGGAGC
TGTCTCGCCAGCTGCTCGAGGCGTTGCGCTTCTTGCACGGCTTCGGGCTG
GTGCACACGGACCTGAAGCCCGAGAATATTCTGTTCTGCGACGCTGAATC
TGCCGCGTGGAACAACGGCGACCAGTACGGCGGCGATGGCGAGCTCGTCC
TGCCCAAGTCCTCCCGCATCAAAGTGATCGACTTTGGTGGGGCGACGTAC
AAGGATGACCACAAGAGTTCCATCGTCAACACGCGGCAGTACCGCGCCCC
TGAGGTGATTCTGGGCACAGGCTGGTGCTGCCCGTCCGACCTGTGGTCGC
TCGGCTGCATCATCGCCGAAATGTACCAGGGGGACCTCCTCTTTGAGACG
CACGATAACACGGAGCACATCGCCCTGATCGAGCGCTGCGTGGGACCATT
CCCACCGCGCATGGTGGAGCGGTCCCGCGTGGGCCACAAGTACTTCGACA
GCCGCGGACGGGCGCGCGGCGCCAAGGCGGGCCGCAAGGAAAGCCAGGAG
CGCATCCGCCGCATG
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