mRNA_P-wetherbeei_contig1556.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1556.5.1
Unique NamemRNA_P-wetherbeei_contig1556.5.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1556.5.1 vs. uniprot
Match: A0A6H5JDE6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDE6_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 4.790e-74
Identity = 138/373 (37.00%), Postives = 206/373 (55.23%), Query Frame = 3
Query:  246 QRLDWDRHVNLGLDCLWFKRMYRLSKPVFDELVELLTPDLAKSENMLSKLRHADIIPSHIQVAMALQYLGGGSYLTIFTLFGVSKSASYDILYRVCDAIN*VMRLPGL--PRDEATCSARTREFEACSTEGVFKHCVGAVDGILVKI-------TSRGTSFFSGHKNASGMNLQAVCDARLRFLTVDMSCPGSTNDARAWTHTLAYRQLSQVPRPYHINGDAAYPSGEQLIVPFPGARQHPTRDAFNFYQSQVRIKIEQAFGLWVGRWGVLWRPMSGSLENIAKIVGASVRLHNYCIDKGDSNVRVPDEAPDALR--PAVDHRGILSGAEWRTEGAGRGRGSGFSAARDRILGEIQLASLTRPARNVARNSVR 1331
            +RLDW+ HV        F+RMYR+ +  FD+L ELL P L +++        +  +P  I++A+AL+   G SY+ +  LFG++K + ++++++V DAIN    +     P+    C+ + RE+E  ST G F  CV A DG+ VK        T    SFFSGHKN  G+N+QA CDA  RF ++     GSTND  AW  +     ++++P  +++ GDAAYP  +QL+ P+PG      +DAFNFY SQ+R+KIEQAFG+ VG+WG+LWRP+       + ++ A  RLHN+  D+    V + +E  D+ R  P +     L   +++T   G    SG  A R  +   +      RP  NV RN  R
Sbjct:   67 RRLDWEEHVKDVRRRKLFRRMYRMEEHSFDKLAELLRPILERNDYSARLRTSSGAVPVKIRLAVALRMFAGASYIDVALLFGIAKESVFNVMWQVVDAINNTPTVGPFFFPQTVEECTRQAREWEVKSTGGAFAGCVAAGDGLFVKTFAPTVVNTPNVLSFFSGHKNGYGLNIQATCDANYRFCSMSAIAAGSTNDWTAWNRSELSDSVARLPPGFYMLGDAAYPLSDQLLTPYPGKLLPRDQDAFNFYLSQLRVKIEQAFGILVGQWGILWRPLRVQFAGRSGLITALFRLHNFLCDEKVKPVHMTEEDGDSARDRPNLTEEDTLP-EDFQTASRGTPTRSGDVATRMALRMTLDNKRQYRPLHNVVRNEAR 438          
BLAST of mRNA_P-wetherbeei_contig1556.5.1 vs. uniprot
Match: A0A6H5JHK3_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHK3_9PHAE)

HSP 1 Score: 233 bits (595), Expect = 4.710e-69
Identity = 126/340 (37.06%), Postives = 195/340 (57.35%), Query Frame = 3
Query:  153 ILLYIAALMTSWWFLLRSSSRPGRAPTSEHYQRLDWDRHVNLGLDCLWFKRMYRLSKPVFDELVELLTPDLAKSENMLSKLRHADIIPSHIQVAMALQYLGGGSYLTIFTLFGVSKSASYDILYRVCDAIN*VMRLPGL--PRDEATCSARTREFEACSTEGVFKHCVGAVDGILVKI-------TSRGTSFFSGHKNASGMNLQAVCDARLRFLTVDMSCPGSTNDARAWTHTLAYRQLSQVPRPYHINGDAAYPSGEQLIVPFPGARQHPTRDAFNFYQSQVRIKIEQAFGLWVGRWGVLWRPMSGSLENIAKIVGASVRLHNYCIDKGDSNVRVPDE 1145
            I+L +  + T+   +++S +   R P  E  +RLDW+ HV        F+RMYR+ +  F++L ELL P L  ++    K   +  +P  I++A+AL+ L G SYL +  LFG++K   + +L+ V DAIN    +     P+    C+ + +E+EA ST GVF  CV A DG+ VK        T    S+FSG+K+  G+N+QA CDA  RF ++     G+TND  AW  +     ++++P  Y++ GDAAYP  + L+ P+PG       D+FNF+ SQ+R+KIEQA+G+ VG+WG+LWRP+       + ++ A  RLHNY  D+    V + +E
Sbjct:   41 IVLVLTVVTTT---VVQSFAPKARLPIHEP-RRLDWEEHVRDIKRRGVFRRMYRMEEHSFNKLAELLRPFLESNDFYARKRTRSGAVPVKIRLAVALRMLAGASYLDVAVLFGIAKETVFHVLWEVVDAINNTPEVGAFFFPQTRDDCARQAKEWEAKSTGGVFSGCVAAGDGLFVKTIAPSPVDTPNVLSYFSGNKSGYGLNIQATCDANYRFCSMSAISAGATNDWTAWNRSSLSDSVARLPPGYYVLGDAAYPLSDHLLTPYPGKLLPRDEDSFNFHLSQLRVKIEQAYGILVGQWGILWRPLRVQFAGRSALITALFRLHNYLRDEQVKPVHMSEE 376          
BLAST of mRNA_P-wetherbeei_contig1556.5.1 vs. uniprot
Match: A0A6H5L386_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L386_9PHAE)

HSP 1 Score: 231 bits (589), Expect = 9.800e-68
Identity = 126/336 (37.50%), Postives = 189/336 (56.25%), Query Frame = 3
Query:  246 QRLDWDRHVN--LGLDCLWFKRMYRLSKPVFDELVELLTPDLAKSENMLSKLRHADIIPSHIQVAMALQYLGGGSYLTIFTLFGVSKSASYDILYRVCDAIN*VMRLPGL--PRDEATCSARTREFEACSTEGVFKHCVGAVDGILVKI-------TSRGTSFFSGHKNASGMNLQAVCDARLRFLTVDMSCPGSTNDARAWTHTLAYRQLSQVPRPYHINGDAAYPSGEQLIVPFPGARQHPTRDAFNFYQSQVRIKIEQAFGLWVGRWGVLWRPMSGSLENIAKIVGASVRLHNYCIDKGDSNVRVPDEAPDAL--RPAVDHRGILSGAEWRTE 1214
            QRLDWD H +     DC  FKRMYR+ +  F++L ELL P L  +++          I   I++A+AL+ L G SYL +  +FG+     Y  L+ V DAIN    +     P+ E  C      F+  ST G+F  CV  VDG+ VK        T+   +++SG K A G+N+QA+C A  RF ++    PG+TND  AW  +   R ++++P+ +++ GDAAYP  EQL+ P+PG       D+FNF+ SQ+R+KIEQ+FG+ VG WG+LWRP+         ++ A  RLHN+  D+  + V + DE  ++   RP +  +G L   EW+++
Sbjct:   66 QRLDWDEHADDLEERDC--FKRMYRMPRHAFEKLAELLAPLLTVNKHFAELRTLNGAISVQIRLAVALRILAGASYLDVAVMFGLGLPTVYATLWMVIDAINSTPEVGAFFFPQTEFDCRGHAARFKRKSTNGIFSFCVACVDGLFVKTLAPSPKDTANVIAYYSGQKCAYGINVQAMCTADYRFCSMSAITPGATNDWAAWLRSKLSRAVNRLPKGFYVLGDAAYPLSEQLLTPYPGKNLPLGEDSFNFHLSQLRVKIEQSFGILVGTWGILWRPLKVDFAGRTDLITALFRLHNFLRDEQVTPVHLCDEDEESGLGRPVLSRQGTLP-PEWQSD 398          
BLAST of mRNA_P-wetherbeei_contig1556.5.1 vs. uniprot
Match: A0A6H5JUE6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUE6_9PHAE)

HSP 1 Score: 231 bits (589), Expect = 1.800e-67
Identity = 122/317 (38.49%), Postives = 183/317 (57.73%), Query Frame = 3
Query:  222 RAPTSEHYQRLDWDRHVNLGLDCLWFKRMYRLSKPVFDELVELLTPDLAKSENMLSKLRHADIIPSHIQVAMALQYLGGGSYLTIFTLFGVSKSASYDILYRVCDAIN*VMRLPGL--PRDEATCSARTREFEACSTEGVFKHCVGAVDGILVKI-------TSRGTSFFSGHKNASGMNLQAVCDARLRFLTVDMSCPGSTNDARAWTHTLAYRQLSQVPRPYHINGDAAYPSGEQLIVPFPGARQHPTRDAFNFYQSQVRIKIEQAFGLWVGRWGVLWRPMSGSLENIAKIVGASVRLHNYCIDKGDSNVRVPDE 1145
            R P  E  +RLDWD HV        F+R YR+ +  FD+L +LL P L +++    K      +P   ++A+AL+ L G SY+ +  LFG++K   + +L+ V DAIN    +     P+    C+ + +E+EA ST G    CV A DG+ VK        T    S+FSG+K+  G+N+QA CDA  RF ++     G+TND  AW  +   R ++++P  Y++ GDAAYP  +QL+ P+PG      +DA+NFY SQ+R+KIEQAFG+ VG+WG+LWRP+       + ++ A  RLHNY  D+  + V + +E
Sbjct:   63 RLPVHEP-RRLDWDEHVRDLRRRKVFRRTYRMEEGCFDKLADLLRPILERNDFYARKRTRHGAVPVKHRLAVALRILAGASYMDVAVLFGIAKETVFHVLWEVVDAINNTPEVGPFFFPQTVEECARQAKEWEAKSTGGAISGCVAAGDGLFVKTIAPSPVDTPNVLSYFSGNKSGYGLNIQATCDANYRFCSMSAISAGATNDWTAWNRSELSRAVARLPPGYYMLGDAAYPLSDQLLTPYPGKLLPRDQDAYNFYLSQLRVKIEQAFGILVGQWGILWRPLRVQFAGRSALITALFRLHNYLRDEQVTPVHLTEE 378          
BLAST of mRNA_P-wetherbeei_contig1556.5.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE)

HSP 1 Score: 226 bits (575), Expect = 9.830e-66
Identity = 134/370 (36.22%), Postives = 199/370 (53.78%), Query Frame = 3
Query:  246 QRLDWDRHVNLGLDCLWFKRMYRLSKPVFDELVELLTPDLAKSENMLSKLRHADIIPSHIQVAMALQYLGGGSYLTIFTLFGVSKSASYDILYRVCDAIN*VMRLPGLPRDEATCSARTREFEACSTEGVFKHCVGAVDGILVKITSRGT-------SFFSGHKNASGMNLQAVCDARLRFLTVDMSCPGSTNDARAWTHTLAYRQLSQVPRPYHINGDAAYPSGEQLIVPFPGARQHPTRDAFNFYQSQVRIKIEQAFGLWVGRWGVLWRPMSGSLENIAKIVGASVRLHNYCIDKGDSNVRVPDEAPDALRPAVDHRGILSGAEWRTEGAGRGR---GSGFSAARDRILGEIQLASLTRPARNVARNS 1325
            +R  W  +    +    F+  +R+    F  L ++L P L ++E M   LR+  +IP   Q+AMAL++L GGS   +     +++S +Y I++RV DAIN    L  +  +      +   +   ST GV + CVGA+DG+ V++T           SF+SGHK   GMN Q VC+AR   +   M+CPGS ND  A+ H++    L  +P   +I GDAAYP+ +Q++VP+PG     ++DA+NFYQSQ RI IEQAFG+ V  WG+LWRP+   LE ++ ++ + VRLHN+   +     R P      +       G L G  + T    RGR   G   SA R+ I   ++  S+ RP  N+ RNS
Sbjct:   49 ERRSWYTYAKPMVQDGTFRLRFRMDYTEFALLADMLRPKLERNERM-GALRNG-VIPVEFQLAMALRFLAGGSVFEVMDGNVIARSTAYAIVHRVIDAINQTRELDCVWPEGEDALDQCGMYRRRSTNGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQGVCNARYEIIAWTMNCPGSCNDRTAFKHSVFGTVLKTLPPGAYIVGDAAYPASDQVLVPYPGTSLTRSQDAYNFYQSQARISIEQAFGIMVKTWGILWRPLDMRLERVSSVINSVVRLHNFLRRRRARIPRSPWRVTQPVEVRFRPDGSLEGTYFDTVPT-RGRQTRGGRASAPREAIRQYLEQYSIGRPRWNLQRNS 415          
BLAST of mRNA_P-wetherbeei_contig1556.5.1 vs. uniprot
Match: A0A6H5JD50_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD50_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 8.760e-64
Identity = 141/387 (36.43%), Postives = 210/387 (54.26%), Query Frame = 3
Query:  216 PGRAPTSEHYQRLDWDRHVNLGLDCLWFKRMYRLSKPVFDELVELLT----PDLAKSENMLSKLRHADIIPSHIQVAMALQYLGGGSYLTIFTLFGVSKSASYDILYRVCDAIN*VMRLPGL--PRDEATCSARTREFEACSTEGVFKHCVGAVDGILVKI-------TSRGTSFFSGHKNASGMNLQAVCDARLRFLTVDMSCPGSTNDARAWTHTLAYRQLSQVPRPYHINGDAAYPSGEQLIVPFPGARQHPTRDAFNFYQSQVRIKIEQAFGLWVGRWGVLWRPMSGSLENIAKIVGASVRLHNYCIDKGDSNVRVPDEAPDA--LRPAV--DHRGILSGAEWRTEGAGRGRGSGFSAARDRILGEIQLASLTRPARNVARNS 1325
            P R P ++H   LD  RH         ++R YR+ K  F +LVEL        L+ ++ + S    A  I   ++VA AL+ L GGSY  +  +FG+S++ ++DIL++V DAIN    +     P  E  C      F+  ST+G+F   V AVDG+ +K        T+   +++SG K+A G+N+QA+C A  RF  +    PGSTND  AW  +   + ++++P  +HI GDAAYP GE+L+ P+PG       D+FNF+ SQ+R+KIEQ+FG+ V  WG+LWRP+       A ++ A   LHN+  D+  S ++V +E   +   RPA+    R +  G  W+TE     R SG + AR  I   ++L    RP  N  RNS
Sbjct:   73 PKRLPWAQHEADLD-KRHG--------WRRSYRMEKGSFHKLVELSALRWKSTLSSAQALRSPTNGA--IAVEVRVAAALRILAGGSYWDVALMFGLSRAVTFDILWQVIDAINETPAIGAFDFPLTEEGCMRNANRFKEKSTDGIFSWVVAAVDGLFIKAKAPYAKDTANVLAYYSGSKSAYGINVQAMCTADYRFCAMSAISPGSTNDWVAWNRSSLAKAVARLPTGFHIIGDAAYPIGEKLLTPYPGRLLPAGEDSFNFHLSQLRVKIEQSFGILVSTWGILWRPLRVQFAGRADLITALFHLHNFLQDEKVSPIQVAEEDSRSGRNRPALCATQRTLPDG--WQTEQPAPSR-SGETPARAAIRTALELKKQWRPDYNRRRNS 445          
BLAST of mRNA_P-wetherbeei_contig1556.5.1 vs. uniprot
Match: A0A6H5JV75_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV75_9PHAE)

HSP 1 Score: 220 bits (560), Expect = 3.950e-63
Identity = 134/394 (34.01%), Postives = 205/394 (52.03%), Query Frame = 3
Query:  198 LRSSSRPGRAPTSEHYQRLDWDRHVNLGLDCLWFKRMYRLSKPVFDELVELLTPDLAKSENMLSKLRHADIIPSHIQVAMALQYLGGGSYLTIFTLFGVSKSASYDILYRVCDAIN*VMRLPGL--PRDEATCSARTREFEACSTEGVFKHCVGAVDGILVKI-------TSRGTSFFSGHKNASGMNLQAVCDARLRFLTVDMSCPGSTNDARAWTHTLAYRQLSQVPRPYHINGDAAYPSGEQLIVPFPGARQHPTRDAFNFYQSQVRIKIEQAFGLWVGRWGVLWRPMSGSLENIAKIVGASVRLHNYCIDKGDSNVRVPDEAPDAL--RPAV----DHRGILSGAEWRTEGAGRGRGSGFSAARDRILGEIQLASLTRPARNVARNSVRR 1334
            + +S+   RA   E  +RL W+ H          +RMYR+ +PVF++L  LL P L   +    K      + + I++A+ L+ + G SY+    LFGVSK  ++ IL++V DAIN    +     P+ E  C+ +  E+E  ST G F+  V A DG+ VK        T    S++SG K   G+N+QA CDA  RF ++    PGSTND  AW H+     +  +P  +++ GDAAYP  + L+ P+PG      +DAFNFY SQ+R++IEQAFG+ VG+WG+LW+P+         ++ A  RLHN+  D+  + +   +E  + +  RP +       G  S     T+ A +   SG  + R  I   +      RP  N+ RN+ R+
Sbjct:   58 VHASANKTRAAIHEP-RRLVWEDHAADLKKRKLLRRMYRMEEPVFNKLAGLLEPILQLYDYYARKRYRRGAVSTKIRLAIGLRMMAGASYIDAAMLFGVSKETAFSILWQVVDAINSTAEVGPFFFPQSEDECTRQAAEWEEKSTGGAFQGVVAAGDGLFVKTLAPTALNTPNVLSYYSGSKCGYGVNVQATCDANYRFCSMSCIAPGSTNDWTAWNHSDLSTAVKNLPPGFYMLGDAAYPLSDHLLTPYPGRGLPLDKDAFNFYLSQLRVRIEQAFGILVGQWGILWKPLRVQFAGRCDLITALFRLHNFLRDEKVTPIHRSEEDAEVVQVRPHLLGDKTLPGTFSTTTKTTKDAQKPTRSGEVSTRKGITMMLDNKRQYRPKHNLVRNAARK 450          
BLAST of mRNA_P-wetherbeei_contig1556.5.1 vs. uniprot
Match: A0A6H5KNZ9_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNZ9_9PHAE)

HSP 1 Score: 215 bits (548), Expect = 2.080e-61
Identity = 138/382 (36.13%), Postives = 205/382 (53.66%), Query Frame = 3
Query:  222 RAPTSEHYQRLDWDRH-VNLGLDCLWFKRMYRLSKPVFDELVELLTPDLAKSE--NMLSKLRHADIIPSHIQVAMALQYLGGGSYLTIFTLFGVSKSASYDILYRVCDAIN*VMRLP--GLPRDEATCSARTREFEACSTEGVFKHCVGAVDGILVKI-------TSRGTSFFSGHKNASGMNLQAVCDARLRFLTVDMSCPGSTNDARAWTHTLAYRQLSQVPRPYHINGDAAYPSGEQLIVPFPGARQHPTRDAFNFYQSQVRIKIEQAFGLWVGRWGVLWRPMSGSLENIAKIVGASVRLHNYCIDKGDSNVRVPDEAPDAL--RPAVDHRGILSGAEWRTEGAGRGRGSGFSAARDRILGEIQLASLTRPARNVARNS 1325
            R P +E  +RL W +H  +L     W +R YRL K  F +LVELL P L        L   R+   I   ++VA+AL  L   SY  +  +FG+S + +Y +L+ V DAIN    +     P  E  C      F+  ST+G+F   V AVDG+ +K        T    +++SG K+A G+N+QA+C A  RF  +    PGSTND  AW  +   + ++++P  +HI GDAAYP GE+L+ P+PG +     D+FNF+ SQ+R+KIEQ+FG+ V  WG+LWRP+   L   A ++ A   LHN+  D+  + +++ +E   +   RPA+         +W TE A     SG + AR  I   ++L    RP  N+ RN+
Sbjct:   71 REPINEP-KRLPWAQHEADLDKRRGW-RRSYRLEKGSFHKLVELLRPSLEVIAFFGALRSPRNG-AIAVEVRVAVALTILADASYWDVLLMFGLSVAVTYLVLWEVIDAINNTPAVGPFAFPLTEKGCMRNANRFKDKSTDGIFSWVVAAVDGLFIKAEAPRAKETKNVIAYYSGSKSAYGINVQAMCTADYRFCAMSAISPGSTNDWVAWNRSSLAKAVARLPTGFHIIGDAAYPIGEKLLTPYPGRQLPAGEDSFNFHLSQLRVKIEQSFGILVSTWGILWRPLRVQLGGRADLITALFHLHNFLQDEKVAPIQLSEEDSRSRLNRPALCATQHTLPDDWGTEPAPSR--SGETPARAAIRKALELKKQWRPDYNLQRNA 447          
BLAST of mRNA_P-wetherbeei_contig1556.5.1 vs. uniprot
Match: A0A6H5L3C4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3C4_9PHAE)

HSP 1 Score: 211 bits (537), Expect = 2.100e-59
Identity = 133/376 (35.37%), Postives = 196/376 (52.13%), Query Frame = 3
Query:  246 QRLDWDRH-VNLGLDCLWFKRMYRLSKPVFDELVELLTPDLAKSENMLSKLRHA--DIIPSHIQVAMALQYLGGGSYLTIFTLFGVSKSASYDILYRVCDAIN*VMRLPGL--PRDEATCSARTREFEACSTEGVFKHCVGAVDGILVKI-------TSRGTSFFSGHKNASGMNLQAVCDARLRFLTVDMSCPGSTNDARAWTHTLAYRQLSQVPRPYHINGDAAYPSGEQLIVPFPGARQHPTRDAFNFYQSQVRIKIEQAFGLWVGRWGVLWRPMSGSLENIAKIVGASVRLHNYCIDKGDSNVRVPDE----APDALRPAVDHRGILSGAEWRTEGAGRGRGSGFSAARDRILGEIQLASLTRPARNVARNS 1325
            +RL W +H  +L     W +R YR+ K  F +     TP L         LR      I   ++VA+AL+ L G SY  +  +FG+S   +Y IL+ V DAIN    +     P  E  C      F+  ST+G+F   V AVDG+ +K        T+   +++SG K+A G+N+QA+C A  RF  +    PGSTND  AW  +   + ++++P  +HI GDAAYP GE+L+ P+PG    P  D+FNF+ SQVR+ IEQ+FG+ V  WG+LWRP+       A ++ A   LHN+  D+  + +++ +E      + L      R + +G  W+TE     R SG + AR  I   ++L    RP  N  RNS
Sbjct:  115 KRLPWAQHEADLDKRQGW-RRSYRMEKGQFPQACRA-TPPLLAVNAFFGALRSPINGAIAVEVRVAVALRILAGASYWDVALMFGLSVPTTYQILWSVIDAINKTRAVGAFDFPLTEEGCMRNANRFKEKSTDGIFSWVVAAVDGLFIKAKAPCAKDTANVIAYYSGSKSAYGINVQAMCTADYRFCAMSAISPGSTNDWVAWNRSSLAKAVARLPAGFHIIGDAAYPIGEKLLTPYPGRLLPPGEDSFNFHLSQVRVMIEQSFGILVATWGILWRPLHVQYGGRADLITALFHLHNFLQDEKVAPIQLAEEDSRSGRNRLALCATQRTLPAG--WQTEQPAPSR-SGETPARAAIRTALELKKQWRPDYNRRRNS 485          
BLAST of mRNA_P-wetherbeei_contig1556.5.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 8.010e-57
Identity = 113/306 (36.93%), Postives = 171/306 (55.88%), Query Frame = 3
Query:  207 SSRPGRAPTSEHYQRLDWDRHVNLGLDCLWFKRMYRLSKPVFDELVELLTPDLAKSENMLSKLRHADIIPSHIQVAMALQYLGGGSYLTIFTLFGVSKSASYDILYRVCDAIN*VMRLPGLPRDEATCSARTREFEACSTEGVFKHCVGAVDGILVKIT-------SRGTSFFSGHKNASGMNLQAVCDARLRFLTVDMSCPGSTNDARAWTHTLAYRQLSQVPRPYHINGDAAYPSGEQLIVPFPGARQHPTRDAFNFYQSQVRIKIEQAFGLWVGRWGVLWRPMSGSLENIAKIVGASVRLHNY 1103
            S  P       + +R  +  +V   ++   F++ +R+    F  L ++L P L + E M   LR+   IP   Q+AM L++L GGS   +     ++KS +Y I++RV DAIN   +L           A+   +   ST GV + CVGA+DG+ V++        +   SF+SGHK A GMN Q +C+A    +T  M+CPGS ND  A+ H+     LS++P    I GDAAYP+  +++VP PG     ++DA+NFYQSQ RI IEQAFG+ V  W +LW+P++  L+ +  ++ A VRLHN+
Sbjct:   40 SDAPAHRGNFVYRERRSFYTYVRPMVEDNTFRKRFRMDYTDFMTLADILRPKLQRDEKM-GALRNG-AIPVEFQLAMTLRFLAGGSVFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPYGDDAEAQAELYRRRSTNGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQGICNASYEIITWTMNCPGSQNDRTAFKHSGFDALLSKMPPDCFIVGDAAYPASNRVLVPDPGTALTLSQDAYNFYQSQARISIEQAFGILVKTWEILWKPLAIRLDRVGHVMNAIVRLHNF 343          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1556.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JDE6_9PHAE4.790e-7437.00DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JHK3_9PHAE4.710e-6937.06DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L386_9PHAE9.800e-6837.50DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JUE6_9PHAE1.800e-6738.49DDE Tnp4 domain-containing protein n=3 Tax=Ectocar... [more]
A0A6H5K3F2_9PHAE9.830e-6636.22DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JD50_9PHAE8.760e-6436.43DDE Tnp4 domain-containing protein n=3 Tax=Ectocar... [more]
A0A6H5JV75_9PHAE3.950e-6334.01DDE Tnp4 domain-containing protein n=4 Tax=Ectocar... [more]
A0A6H5KNZ9_9PHAE2.080e-6136.13DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5L3C4_9PHAE2.100e-5935.37DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K6M2_9PHAE8.010e-5736.93DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1556contigP-wetherbeei_contig1556:4493..5979 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog4792.ETI30523
PFAMsDDE_Tnp_4
Model size1356
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons2
Evalue3.03e-10
EggNOG OGsKOG4585@1|root,KOG4585@2759|Eukaryota,3QI3U@4776|Peronosporales
Descriptionnuclease activity
Cds size417
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186059.9496615-UTR-P-wetherbeei_contig1556:4492..51891683186059.9496615-UTR-P-wetherbeei_contig1556:4492..5189Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1556 4493..5189 -
1683186059.9647558-UTR-P-wetherbeei_contig1556:5320..54311683186059.9647558-UTR-P-wetherbeei_contig1556:5320..5431Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1556 5321..5431 -
1683186059.97912-UTR-P-wetherbeei_contig1556:5848..59791683186059.97912-UTR-P-wetherbeei_contig1556:5848..5979Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1556 5849..5979 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186059.9719281-CDS-P-wetherbeei_contig1556:5431..58481683186059.9719281-CDS-P-wetherbeei_contig1556:5431..5848Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1556 5432..5848 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1556.5.1prot_P-wetherbeei_contig1556.5.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1556 5432..5848 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1556.5.1

>prot_P-wetherbeei_contig1556.5.1 ID=prot_P-wetherbeei_contig1556.5.1|Name=mRNA_P-wetherbeei_contig1556.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=139bp
MEDDSDFILLYIAALMTSWWFLLRSSSRPGRAPTSEHYQRLDWDRHVNLG
LDCLWFKRMYRLSKPVFDELVELLTPDLAKSENMLSKLRHADIIPSHIQV
AMALQYLGGGSYLTIFTLFGVSKSASYDILYRVCDAIN*
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mRNA from alignment at P-wetherbeei_contig1556:4493..5979-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1556.5.1 ID=mRNA_P-wetherbeei_contig1556.5.1|Name=mRNA_P-wetherbeei_contig1556.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1487bp|location=Sequence derived from alignment at P-wetherbeei_contig1556:4493..5979- (Phaeothamnion wetherbeei SAG_119_79)
AAGAAAAAACTGTTGGCCATTTTTCCGTTCCACTCGAGCTTTAATTTAAA TAGGAAGATGACGGCGGTGACGTGGCGCCATGGCATTCAAAGGGAAGAGC AGAGGTCAAGTTTTTACCAAGCTCTGGGGCCATGGAGGACGATTCTGATT TCATTCTTCTTTACATCGCGGCTCTGATGACCTCGTGGTGGTTTTTGCTT CGATCGTCGTCTCGTCCGGGTCGAGCGCCCACCAGCGAGCATTACCAGCG ACTTGACTGGGATCGACACGTGAACTTAGGCCTGGATTGCCTTTGGTTCA AGCGGATGTACCGATTGAGCAAGCCTGTATTCGACGAGCTTGTGGAGCTG CTTACTCCTGATCTCGCGAAGAGCGAAAACATGTTGTCGAAGCTTAGACA CGCGGACATTATCCCCTCACATATCCAGGTGGCAATGGCCCTCCAATACC TCGGCGGGGGTTCATATTTAACTATCTTTACCCTATTTGGGGTCAGCAAG TCTGCATCCTACGACATCCTTTATCGAGTTTGCGACGCCATTAATTAGGT GATGCGTCTTCCAGGTCTCCCGCGGGATGAGGCAACTTGCTCTGCGAGAA CTCGCGAGTTTGAGGCGTGCAGCACCGAGGGGGTGTTTAAGCATTGCGTT GGAGCTGTGGTAAGTCGCTCGCCTGCCTTCTGGCTTTAAATTTCATGAAA CCGTCATTCCCCACGCGCCTCGCTACCGCCCGCCGGAGCAACACGGTTTT CTCATGGCCCCCTTCCCCCGGCGATATTGCTTGTCAACAGGATGGCATTC TCGTAAAGATTACGAGCCGGGGAACAAGCTTCTTCAGCGGTCATAAGAAT GCGAGCGGGATGAATCTGCAAGCGGTCTGCGACGCCCGCCTCCGGTTCCT GACTGTGGACATGTCATGCCCTGGATCTACAAATGATGCACGGGCATGGA CGCACACGCTGGCTTACAGGCAGCTGTCTCAGGTGCCGCGCCCTTACCAT ATTAACGGGGACGCAGCATACCCCTCCGGTGAGCAGCTTATTGTGCCGTT TCCGGGAGCCCGCCAACATCCCACAAGGGACGCTTTCAACTTCTACCAGA GCCAAGTTCGTATTAAAATTGAGCAAGCTTTCGGTCTTTGGGTGGGCCGA TGGGGGGTGCTGTGGAGGCCAATGTCTGGAAGCTTGGAAAATATTGCGAA AATTGTTGGGGCCAGCGTCCGGCTGCACAATTACTGCATCGACAAGGGTG ACTCGAACGTTAGAGTACCTGATGAGGCACCTGATGCTCTGCGGCCGGCC GTAGATCACCGCGGTATTCTGAGTGGCGCTGAGTGGAGGACGGAGGGGGC CGGCCGAGGGCGGGGTTCAGGCTTCAGTGCCGCACGTGACCGTATTTTAG GCGAAATCCAACTTGCCAGCCTGACACGGCCCGCCCGCAATGTTGCTCGC AATTCGGTCCGGCGTTAGCGGAGGATGGGATCTTTCT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1556:4493..5979-

>mRNA_P-wetherbeei_contig1556.5.1 ID=mRNA_P-wetherbeei_contig1556.5.1|Name=mRNA_P-wetherbeei_contig1556.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=417bp|location=Sequence derived from alignment at P-wetherbeei_contig1556:4493..5979- (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGGACGATTCTGATTTCATTCTTCTTTACATCGCGGCTCTGATGAC
CTCGTGGTGGTTTTTGCTTCGATCGTCGTCTCGTCCGGGTCGAGCGCCCA
CCAGCGAGCATTACCAGCGACTTGACTGGGATCGACACGTGAACTTAGGC
CTGGATTGCCTTTGGTTCAAGCGGATGTACCGATTGAGCAAGCCTGTATT
CGACGAGCTTGTGGAGCTGCTTACTCCTGATCTCGCGAAGAGCGAAAACA
TGTTGTCGAAGCTTAGACACGCGGACATTATCCCCTCACATATCCAGGTG
GCAATGGCCCTCCAATACCTCGGCGGGGGTTCATATTTAACTATCTTTAC
CCTATTTGGGGTCAGCAAGTCTGCATCCTACGACATCCTTTATCGAGTTT
GCGACGCCATTAATTAG
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