mRNA_P-wetherbeei_contig15553.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15553.1.1
Unique NamemRNA_P-wetherbeei_contig15553.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15553.1.1 vs. uniprot
Match: UPI0019C1B495 (DUF1849 family protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=UPI0019C1B495)

HSP 1 Score: 242 bits (618), Expect = 6.390e-76
Identity = 129/287 (44.95%), Postives = 180/287 (62.72%), Query Frame = 1
Query:    1 MGHRNHGVSRVLKRVLLAGVFLALVSQAQASAVAPHRAVYDLQLLRASQGANVGSVSGRMAYEVSGSECDGWTVSFRLVNRFDYKEGTPRLFDTQSSSWETGDGKAMNYSEKEFVDSKQESEKRLSVVRAGKDSVGEVRITLPQEKKSSISAEAVFPMRHQLRLMEAAAKGETR------EVSLVYDGSDEEKTVRAISTIGKKVNAGEGKKDKDNAQAAPLQSLPSWPVTIGYYSTEEDNSETPLYQINFDMYENGVSNSLVMDYGSFALSGKLAHLELLKAETCQ 843
            M HR  GVSR +K  L A + LA V  A A+ +A HRA YDL+L+RA   A + +V GR   E+ GS C+GW V+ R+VN++   EG P   D QSS++E+GD   M YS++EFVD K + E  + + R   D+           K  ++ A AVFP++HQL +M+ A KGETR      + SL+Y+GSD   T  AI+ IG++  AG   +D  N++A PL + PSWP++I YYST  D+ ETP YQI FD+Y NGV+  L +DYG+F L G+LA  E+LK++ C+
Sbjct:    1 MDHRAQGVSRPMKISLSALLLLAAVPAADAATIAAHRATYDLKLVRAGDSAQLSAVYGRWVIEIQGSACEGWNVTSRMVNQYSPVEGAPSTVDIQSSAFESGDALRMEYSKQEFVDRKLKEEASIKISRPSADAEAAGAAGQGGGKLFTVPAGAVFPIQHQLSVMDKAEKGETRHASLLRDASLLYEGSDGATTYSAITFIGRRKEAGSNSRDNANSEAKPLGAFPSWPISISYYSTTADDQETPNYQIGFDLYSNGVATGLRLDYGNFVLGGELAKFEMLKSDPCE 287          
BLAST of mRNA_P-wetherbeei_contig15553.1.1 vs. uniprot
Match: A0A847ZVA2_9HYPH (DUF1849 family protein n=1 Tax=Phyllobacteriaceae bacterium TaxID=1871068 RepID=A0A847ZVA2_9HYPH)

HSP 1 Score: 223 bits (567), Expect = 1.140e-68
Identity = 122/271 (45.02%), Postives = 172/271 (63.47%), Query Frame = 1
Query:   34 LKRVLL--AGVFLALVSQAQASAVAPHRAVYDLQLLRASQGANVGSVSGRMAYEVSGSECDGWTVSFRLVNRFDYKEGTPRLFDTQSSSWETGDGKAMNYSEKEFVDSKQESEKRLSVVRAGKDSVGEVRITLPQEKKSSISAEAVFPMRHQLRLMEAAAKGETREVSLVYDGSDEEKTVRAISTIGKKVNAGEGKKDKDNAQAAPLQSLPSWPVTIGYYSTEEDNSETPLYQINFDMYENGVSNSLVMDYGSFALSGKLAHLELLKAETC 840
            + R LL  A   L L   A A+ + PHRA YDL + R   G N+ S+ G++AYE++GS C+G+ VS+R+  R  Y EG  ++ D Q +S+E+GDG  ++ ++K+FVDS+  SE R+ V +   D  G+ +I   + K   + A A+FP R+QL+L+EAA KG TR+VSLVY+GS++EK +RAIS IG       G  +KD+ +   L    +WPV+I YY       E PLYQ +F M  NG+S  LVMDYGS+ALSG L+ LELLK + C
Sbjct:    1 MNRYLLTSASFVLLLAPTATAAPLVPHRAFYDLVVKRLDSGNNISSIKGKLAYEITGSSCEGFAVSYRIAKRVVYTEGGAQVIDNQMTSFESGDGLELDLTQKQFVDSQLNSESRIKVKKDAADKPGKGQIAAAETKDFEMDATALFPTRYQLKLLEAAEKGNTRDVSLVYEGSEDEKAMRAISFIGASRPV-TGLPEKDSGE---LAKSAAWPVSISYYGAASSGDEEPLYQASFMMLPNGISTDLVMDYGSYALSGTLSKLELLKEDAC 267          
BLAST of mRNA_P-wetherbeei_contig15553.1.1 vs. uniprot
Match: A0A7Y2BMF0_9HYPH (Cell envelope integrity EipB family protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7Y2BMF0_9HYPH)

HSP 1 Score: 223 bits (567), Expect = 1.420e-68
Identity = 121/277 (43.68%), Postives = 176/277 (63.54%), Query Frame = 1
Query:   28 RVLKRVLLAGVFLALVSQAQASA---VAPHRAVYDLQLLRASQGANVGSVSGRMAYEVSGSECDGWTVSFRLVNRFDYKEGTPRLFDTQSSSWETGDGKAMNYSEKEFVDSKQESEKRLSVVRAGKDSVGEVRITLPQEKKSSISAEAVFPMRHQLRLMEAAAKGETREVSLVYDGSDEEKTVRAISTIGKKVNAGEGKKDKDNAQAAPLQSLPSWPVTIGYYSTEEDNSE--TPLYQINFDMYENGVSNSLVMDYGSFALSGKLAHLELLKAETCQ 843
            +VL+ ++++ + L +V   Q  A   +A HRAVYDL L  AS  + V  V+GRM  E+SGS C+GWT++FR++NR+  + G  RL D +SSSWE GDG  M++++++F+D+K + E RL V R      GE +I+ P+ +   +S +AVFP++HQ+RL+EAA  GETR+ S+VYDGS+  K   AIS IG +  A     D+    A  L    +WPV+I Y+  + + S   TP YQ++F M+ENGV+  L +DYG FAL GKL   E L+   CQ
Sbjct:    3 KVLQAIVISMLALPVVMAGQVRAEATIAAHRAVYDLSLKHASDRSGVSGVTGRMVIELSGSTCEGWTINFRMINRYLLQRGRTRLADNRSSSWEAGDGLRMHFTQRQFIDNKLQEETRLKVGRERLGVPGEAKISKPKPQTFKLSGDAVFPVQHQIRLVEAALAGETRDRSVVYDGSEGAKAYVAISFIGGETKAS----DQTGKGAEALYGQKAWPVSISYFDQDNEQSGEGTPAYQVSFRMFENGVAGDLTLDYGDFALLGKLTGYEALEQPACQ 275          
BLAST of mRNA_P-wetherbeei_contig15553.1.1 vs. uniprot
Match: A0A3B0S6E6_9ZZZZ (ATP/GTP-binding site motif A n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0S6E6_9ZZZZ)

HSP 1 Score: 215 bits (548), Expect = 1.170e-65
Identity = 126/275 (45.82%), Postives = 173/275 (62.91%), Query Frame = 1
Query:   40 RVLLAGVFLALVSQAQASA----VAPHRAVYDLQLLRASQGANVGSVSGRMAYEVSGSECDGWTVSFRLVNRFDYKEGTPRLFDTQSSSWETGDGKAMNYSEKEFVDSKQESEKRLSVVRAGKDSVGEVRITLPQEKKSSISAEAVFPMRHQLRLMEAAAKGETREVSLVYDGSDEEKTVRAISTIGKKVNAGEGKKD--KDNAQAAPLQSLPSWPVTIGYYSTEE-DNSETPLYQINFDMYENGVSNSLVMDYGSFALSGKLAHLELLKAETCQ 843
            R  LA + L L+     SA    ++PHRAVYDL L  AS  + V  ++GRM  E++GS CDGW+V+FRLVN F    G  RL D++S+SWE GDG +M+Y E+EF+D++     RL V  + KD  G+VR   P+E    + A A+FP+ HQ RL+E A KGE R+ S+VYDG+D +   +AI+ IGKK  +GE +    K    AA L     WPVT+ YY+ ++ D+ +TP  QI+F MYENG++  L +DYG FA+SGKL  LE L    C+
Sbjct:    9 RATLASLSLILLMGTTVSAGVVALSPHRAVYDLTLKSASDRSGVKDLNGRMVLEMTGSVCDGWSVNFRLVNDFQLPRGRSRLVDSRSTSWEAGDGSSMSYLEREFIDNRPHQVTRLRV--SMKD--GKVRQKQPKEVVFDLPANAIFPVTHQKRLIEKAQKGELRDKSIVYDGADRDNIYQAITFIGKK-RSGEKQAAGLKGQGAAALLNGTKFWPVTVSYYTLKDKDDQDTPNQQISFQMYENGIAGDLTIDYGDFAMSGKLVRLEQLPQGKCE 278          
BLAST of mRNA_P-wetherbeei_contig15553.1.1 vs. uniprot
Match: A0A2W2BH36_9HYPH (Uncharacterized protein n=2 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=A0A2W2BH36_9HYPH)

HSP 1 Score: 212 bits (539), Expect = 2.430e-64
Identity = 115/269 (42.75%), Postives = 169/269 (62.83%), Query Frame = 1
Query:   34 LKRVLLAGVFLALVSQAQASAVAPHRAVYDLQLLRASQGANVGSVSGRMAYEVSGSECDGWTVSFRLVNRFDYKEGTPRLFDTQSSSWETGDGKAMNYSEKEFVDSKQESEKRLSVVRAGKDSVGEVRITLPQEKKSSISAEAVFPMRHQLRLMEAAAKGETREVSLVYDGSDEEKTVRAISTIGKKVNAGEGKKDKDNAQAAPLQSLPSWPVTIGYYSTEEDNSETPLYQINFDMYENGVSNSLVMDYGSFALSGKLAHLELLKAETC 840
            LK VL A   +AL S A A+ + PHRA+YDL LLRA++GA++ S SG++A+E+ GS CDG+TV+FR+  ++   +G+  L DT ++++E      + +  KE V+ K     R+S  R   D+ G   +    ++  ++ A A  PM+HQL+LM     G  R+ S+V+DGSD  K  RAIS +G+    G   +D  N  AA L+   +WP+T+ YY+ + D SETP YQ++FDMY+NGV+  LV+DYG FALSGKL  L+LL   +C
Sbjct:    8 LKTVLSALFLVALASGAGAATIVPHRAIYDLTLLRANEGASLQSASGKLAFEIDGSSCDGFTVNFRMATKYRQDDGSAALIDTLTTTFENAGATELRHQLKESVNGKVRDTDRISFNRKTPDAEGTGEMKSKPDETFTVPAGAALPMQHQLKLMALGEAGGGRDSSIVFDGSDGAKAFRAISFVGRPKPPGSVARDAANPAAAALKGDVAWPMTVSYYALDGD-SETPEYQVSFDMYDNGVATGLVLDYGDFALSGKLTDLKLLDKPSC 275          
BLAST of mRNA_P-wetherbeei_contig15553.1.1 vs. uniprot
Match: UPI001904664D (DUF1849 family protein n=1 Tax=Aestuariivirga sp. YIM B02566 TaxID=2800327 RepID=UPI001904664D)

HSP 1 Score: 211 bits (538), Expect = 4.130e-64
Identity = 119/288 (41.32%), Postives = 174/288 (60.42%), Query Frame = 1
Query:    4 GHRNHGVSRVLKRVLLAGVFLALVSQAQASA-VAPHRAVYDLQLLRASQGANVGSVSGRMAYEVSGSECDGWTVSFRLVNRFDYKEGTPRLFDTQSSSWETGDGKAMNYSEKEFVDSKQESEKRLSVVRAGKDS----VGEVRITLPQEKKSSISAEAVFPMRHQLRLMEAAAKGETREVSLVYDGSDEEKTVRAISTIGKKVNAGEGKKDKDNAQAAPLQSLPSWPVTIGYYSTEED---NSETPLYQINFDMYENGVSNSLVMDYGSFALSGKLAHLELLKAETCQ 843
            G R H + R    +L      AL S A A   +  HRAVYDL+L R+S+G+N+    GRM  E++GS CDGW+ SFR V      EG  +L D Q +SWE+GDG ++  ++K+FV+++ E+E RL   +A  DS     G   I+ P+ ++  + A  +FPM HQ RLM+AA +GETR+VS++YDG+   K  + IS IGK+ + G      D      L+ +PSWP++I +Y  ++D   + E P YQ+NF +YENGV+  L +DYG + +SG L  LELL  + C+
Sbjct:    3 GTRKHQIRRGASLLLTLAALAALGSNAWAGVNIRAHRAVYDLKLERSSEGSNISGADGRMVMEITGSACDGWSTSFRRVMELRPNEGETQLLDNQVASWESGDGLSLQLNDKQFVNNRLETETRL---KADMDSDAAKPGRGEISEPKPEEFDLPAGVLFPMAHQKRLMDAAERGETRDVSILYDGASGSKVFKVISFIGKRKDPG-----SDPTIDKALKDMPSWPLSITFYEYDKDTKVSEELPSYQVNFPIYENGVAGPLSIDYGGYVISGTLTKLELLNQQKCE 282          
BLAST of mRNA_P-wetherbeei_contig15553.1.1 vs. uniprot
Match: A0A6G6X159_9HYPH (Cell envelope integrity EipB family protein n=1 Tax=Nordella sp. HKS 07 TaxID=2712222 RepID=A0A6G6X159_9HYPH)

HSP 1 Score: 209 bits (533), Expect = 2.200e-63
Identity = 119/285 (41.75%), Postives = 176/285 (61.75%), Query Frame = 1
Query:    4 GHRNHGVSRVLKRVLLAGVFLALVSQAQASA-VAPHRAVYDLQLLRASQGANVGSVSGRMAYEVSGSECDGWTVSFRLVNRFDYKEGTPRLFDTQSSSWETGDGKAMNYSEKEFVDSKQESEKRLSV-VRAGKDSVGEVRITLPQEKKSSISAEAVFPMRHQLRLMEAAAKGETREVSLVYDGSDEEKTVRAISTIGKKVNAGEGKKDKDNAQAAPLQSLPSWPVTIGYYSTEED---NSETPLYQINFDMYENGVSNSLVMDYGSFALSGKLAHLELLKAETCQ 843
            G R H + R    +L      AL S A A   +  HRAVYDL+L R+S+G+N+    GRM  E++GS CDGW+ SFR V      EG  +LFD Q +SWE+GDG ++  ++K+F++++ ++E RL   + AGK   GE  I+ P+ ++  + A  +FPM HQ RLMEAA +GETR+VS++YDG+   K  + IS IGK    G    D +  +A  L+ + SWP++I +Y  ++D   + E P YQI+F +YENGV+  L +DYG + +SG L  LE+L  + C+
Sbjct:    3 GTRKHQIKRGASLLLGVAALAALGSNAWAGVNIRAHRAVYDLKLERSSEGSNISGADGRMVMELTGSACDGWSTSFRRVMELRPSEGETQLFDNQVASWESGDGSSLQINDKQFINNRLDTETRLKADIDAGKGGRGE--ISEPKPEEFDLPAGVLFPMAHQKRLMEAAERGETRDVSILYDGASGSKAYKVISFIGKPKEPGT---DANTDKA--LKDMRSWPLSITFYEYDKDTKTSEELPDYQISFPLYENGVAGRLSIDYGQYVISGNLTSLEMLTQQKCE 280          
BLAST of mRNA_P-wetherbeei_contig15553.1.1 vs. uniprot
Match: A0A537P5E4_9PROT (DUF1849 family protein n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537P5E4_9PROT)

HSP 1 Score: 208 bits (529), Expect = 9.340e-63
Identity = 114/282 (40.43%), Postives = 174/282 (61.70%), Query Frame = 1
Query:   10 RNHGVSRVLKRVLLAGVFLALVSQAQASA-VAPHRAVYDLQLLRASQGANVGSVSGRMAYEVSGSECDGWTVSFRLVNRFDYKEGTPRLFDTQSSSWETGDGKAMNYSEKEFVDSKQESEKRLSV-VRAGKDSVGEVRITLPQEKKSSISAEAVFPMRHQLRLMEAAAKGETREVSLVYDGSDEEKTVRAISTIGKKVNAGEGKKDKDNAQAAPLQSLPSWPVTIGYYSTEED---NSETPLYQINFDMYENGVSNSLVMDYGSFALSGKLAHLELLKAETC 840
            R H + R    +L      AL S A A   +  HRAVYDL+L R+S+G+NV    GRM  E++GS CDGW+ SFR V      EG  +LFD Q +SWE+GDG+++  ++K+F++++ +SE +L   ++A     G   I  P+ ++  + +  +FPM HQ+ +M+AA +GETR+VS+++DG+   K  + IS IGK+  AG       NA  A L+ +P WP+++ +Y  ++D   + E P YQ++F +YENGV+ +L +DYG + LSGKL  LELL    C
Sbjct:    5 RKHQIRRGASLLLGFAALAALGSNAWAGVNIRAHRAVYDLKLERSSEGSNVSGADGRMVMELTGSTCDGWSTSFRRVMELRPNEGETQLFDNQVASWESGDGRSLQLNDKQFINNRLDSETKLKADMQADPSKGGHGVIAEPKPEEFELPSGVLFPMAHQIHIMQAAERGETRDVSILFDGASGSKVYKVISFIGKRKEAG----SDANADKA-LKDMPFWPISVTFYEYDKDQKTSEELPSYQMSFPIYENGVAGTLTIDYGEYVLSGKLTSLELLNQPVC 281          
BLAST of mRNA_P-wetherbeei_contig15553.1.1 vs. uniprot
Match: A0A849EG81_9HYPH (DUF1849 family protein n=1 Tax=Anderseniella sp. TaxID=1872568 RepID=A0A849EG81_9HYPH)

HSP 1 Score: 201 bits (510), Expect = 5.470e-60
Identity = 107/266 (40.23%), Postives = 161/266 (60.53%), Query Frame = 1
Query:   43 VLLAGVFLALVSQAQASAVAPHRAVYDLQLLRASQGANVGSVSGRMAYEVSGSECDGWTVSFRLVNRFDYKEGTPRLFDTQSSSWETGDGKAMNYSEKEFVDSKQESEKRLSVVRAGKDSVGEVRITLPQEKKSSISAEAVFPMRHQLRLMEAAAKGETREVSLVYDGSDEEKTVRAISTIGKKVNAGEGKKDKDNAQAAPLQSLPSWPVTIGYYSTEEDNSETPLYQINFDMYENGVSNSLVMDYGSFALSGKLAHLELLKAETC 840
            ++  G+  AL + A AS +A HRAVYD+ L  A     +    GRM  E SGS C+GWTV+FR++N+F    G  R+ D++SS WE+G+   + Y +++FVDSK + EK +    A   + G   IT P+E+  S+     FP+ HQL++++AA  GE R+ +L+YDGSD      AI+ IG K +AGE   D+ +A+   +  L  WPV+I Y+  +  + ETP YQ++  +YENGVS  + ++YG F L  KL  ++LL+  TC
Sbjct:   13 IVATGMCFALPAAA-ASPLAAHRAVYDISLKSAEDRTGISGAKGRMVIEFSGSGCEGWTVNFRMINQFFLSGGKSRILDSRSSMWESGESDQLRYVQRQFVDSKLQEEKEIRAKLAEGKTGGSGAITKPKEEIFSLPEGITFPVDHQLKIVKAAEAGEQRDETLLYDGSDGANPAIAITFIGTKRDAGE---DQTDAKMKDVNGLSGWPVSISYFKPDNQDKETPEYQVSMVLYENGVSGDMSLNYGDFVLEAKLTDIKLLEVATC 274          
BLAST of mRNA_P-wetherbeei_contig15553.1.1 vs. uniprot
Match: A0A7S8HAN7_9HYPH (Cell envelope integrity EipB family protein n=1 Tax=Kaustia mangrovi TaxID=2593653 RepID=A0A7S8HAN7_9HYPH)

HSP 1 Score: 197 bits (502), Expect = 1.440e-58
Identity = 107/258 (41.47%), Postives = 160/258 (62.02%), Query Frame = 1
Query:   73 VSQAQASAVAPHRAVYDLQLLRASQGANVGSVSGRMAYEVSGSECDGWTVSFRLVNRFDYKEGTPRLFDTQSSSWETGDGKAMNYSEKEFVDSKQESEKRLSVVRAGKDSVGEVRITLPQEKKSSISAEAVFPMRHQLRLMEAAAKGETREVSLVYDGSDEEKTVRAISTIGKKVNAGEGKKDKDNAQAAPLQSLPSWPVTIGYYSTEE--DNSETPLYQINFDMYENGVSNSLVMDYGSFALSGKLAHLELLKAETC 840
            V+Q    A+APHRAVYDL+L  +     +   SGR+A E + ++C+GWTV+ R+VNR   + GT R  D++SSSWE+ DG +M ++ + +V++  + E +    R G    G V +  P E    I A AVFP+ H  R+++AA  GE REVSLVYDGS+E+   +AI+ IG++   GE +      +   L+S+ SWPV+I Y+   +  D  ETP +Q++F M+EN V+++L +DYG F+LSG L+ LE   A  C
Sbjct:   34 VAQGGLPAIAPHRAVYDLELESSQDRLGLADASGRLALEFAAADCEGWTVNMRIVNRLRTRNGTSRTIDSRSSSWESADGASMAFTLRRYVENTVDEETKGFAERGGDGKPGHVAMEKPAEDAFDIPAGAVFPVEHTKRILKAALDGERREVSLVYDGSEEKTVYKAITFIGERRAPGETRLPAGLGEE--LKSMASWPVSISYFDETKTADGEETPSHQVSFTMFENAVASNLTLDYGDFSLSGTLSTLEFPDAPEC 289          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15553.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0019C1B4956.390e-7644.95DUF1849 family protein n=1 Tax=Hyphomicrobiales ba... [more]
A0A847ZVA2_9HYPH1.140e-6845.02DUF1849 family protein n=1 Tax=Phyllobacteriaceae ... [more]
A0A7Y2BMF0_9HYPH1.420e-6843.68Cell envelope integrity EipB family protein n=1 Ta... [more]
A0A3B0S6E6_9ZZZZ1.170e-6545.82ATP/GTP-binding site motif A n=1 Tax=hydrothermal ... [more]
A0A2W2BH36_9HYPH2.430e-6442.75Uncharacterized protein n=2 Tax=Aestuariivirga lit... [more]
UPI001904664D4.130e-6441.32DUF1849 family protein n=1 Tax=Aestuariivirga sp. ... [more]
A0A6G6X159_9HYPH2.200e-6341.75Cell envelope integrity EipB family protein n=1 Ta... [more]
A0A537P5E4_9PROT9.340e-6340.43DUF1849 family protein n=2 Tax=Alphaproteobacteria... [more]
A0A849EG81_9HYPH5.470e-6040.23DUF1849 family protein n=1 Tax=Anderseniella sp. T... [more]
A0A7S8HAN7_9HYPH1.440e-5841.47Cell envelope integrity EipB family protein n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15553contigP-wetherbeei_contig15553:337..1182 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1185652.USDA257_c35340
Preferred nameMA20_36210
PFAMsDUF1849
Model size846
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue4.81e-51
EggNOG OGs29APY@1|root,2ZXPR@2|Bacteria,1R817@1224|Proteobacteria,2TSBC@28211|Alphaproteobacteria,4B8AN@82115|Rhizobiaceae
DescriptionDomain of unknown function (DUF1849)
Cds size846
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186059.7864647-CDS-P-wetherbeei_contig15553:336..11821683186059.7864647-CDS-P-wetherbeei_contig15553:336..1182Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15553 337..1182 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15553.1.1prot_P-wetherbeei_contig15553.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15553 337..1182 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15553.1.1

>prot_P-wetherbeei_contig15553.1.1 ID=prot_P-wetherbeei_contig15553.1.1|Name=mRNA_P-wetherbeei_contig15553.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=282bp
MGHRNHGVSRVLKRVLLAGVFLALVSQAQASAVAPHRAVYDLQLLRASQG
ANVGSVSGRMAYEVSGSECDGWTVSFRLVNRFDYKEGTPRLFDTQSSSWE
TGDGKAMNYSEKEFVDSKQESEKRLSVVRAGKDSVGEVRITLPQEKKSSI
SAEAVFPMRHQLRLMEAAAKGETREVSLVYDGSDEEKTVRAISTIGKKVN
AGEGKKDKDNAQAAPLQSLPSWPVTIGYYSTEEDNSETPLYQINFDMYEN
GVSNSLVMDYGSFALSGKLAHLELLKAETCQ*
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mRNA from alignment at P-wetherbeei_contig15553:337..1182-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15553.1.1 ID=mRNA_P-wetherbeei_contig15553.1.1|Name=mRNA_P-wetherbeei_contig15553.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=846bp|location=Sequence derived from alignment at P-wetherbeei_contig15553:337..1182- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCCACCGTAATCATGGAGTTTCAAGGGTGTTGAAAAGAGTTCTGTT GGCGGGTGTATTTCTGGCTCTCGTGTCGCAAGCCCAAGCTTCCGCGGTGG CACCCCACCGTGCGGTTTACGACCTCCAGTTGCTGCGCGCCAGCCAGGGC GCCAATGTGGGCAGCGTTTCTGGCCGCATGGCCTACGAAGTTTCAGGCAG CGAATGCGACGGCTGGACCGTAAGCTTCCGCCTGGTCAACCGCTTCGACT ACAAGGAGGGCACGCCGCGCCTTTTTGACACCCAGTCCTCATCCTGGGAA ACCGGTGACGGCAAGGCCATGAACTACAGCGAAAAGGAATTTGTCGACAG CAAGCAGGAGAGCGAAAAGCGCCTGAGCGTTGTCCGCGCCGGAAAGGACA GTGTTGGCGAGGTCAGGATCACCCTGCCGCAGGAGAAAAAATCCTCCATT TCGGCGGAAGCGGTTTTCCCCATGCGCCACCAGTTGCGCCTGATGGAGGC CGCCGCAAAAGGTGAAACCCGTGAAGTCTCCCTGGTCTATGATGGTTCCG ACGAGGAAAAAACCGTCCGCGCCATCAGCACCATTGGCAAGAAAGTAAAT GCCGGTGAGGGCAAGAAGGACAAGGACAATGCCCAGGCAGCCCCCCTGCA GTCGCTGCCGTCCTGGCCTGTAACCATTGGCTATTATTCAACTGAAGAAG ACAATTCCGAAACACCGCTCTACCAGATCAATTTTGACATGTATGAAAAC GGCGTCTCCAACAGCCTGGTCATGGATTATGGAAGCTTTGCCCTCTCGGG GAAATTGGCCCATCTCGAGCTCTTGAAGGCCGAAACGTGCCAATAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15553:337..1182-

>mRNA_P-wetherbeei_contig15553.1.1 ID=mRNA_P-wetherbeei_contig15553.1.1|Name=mRNA_P-wetherbeei_contig15553.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=846bp|location=Sequence derived from alignment at P-wetherbeei_contig15553:337..1182- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCCACCGTAATCATGGAGTTTCAAGGGTGTTGAAAAGAGTTCTGTT
GGCGGGTGTATTTCTGGCTCTCGTGTCGCAAGCCCAAGCTTCCGCGGTGG
CACCCCACCGTGCGGTTTACGACCTCCAGTTGCTGCGCGCCAGCCAGGGC
GCCAATGTGGGCAGCGTTTCTGGCCGCATGGCCTACGAAGTTTCAGGCAG
CGAATGCGACGGCTGGACCGTAAGCTTCCGCCTGGTCAACCGCTTCGACT
ACAAGGAGGGCACGCCGCGCCTTTTTGACACCCAGTCCTCATCCTGGGAA
ACCGGTGACGGCAAGGCCATGAACTACAGCGAAAAGGAATTTGTCGACAG
CAAGCAGGAGAGCGAAAAGCGCCTGAGCGTTGTCCGCGCCGGAAAGGACA
GTGTTGGCGAGGTCAGGATCACCCTGCCGCAGGAGAAAAAATCCTCCATT
TCGGCGGAAGCGGTTTTCCCCATGCGCCACCAGTTGCGCCTGATGGAGGC
CGCCGCAAAAGGTGAAACCCGTGAAGTCTCCCTGGTCTATGATGGTTCCG
ACGAGGAAAAAACCGTCCGCGCCATCAGCACCATTGGCAAGAAAGTAAAT
GCCGGTGAGGGCAAGAAGGACAAGGACAATGCCCAGGCAGCCCCCCTGCA
GTCGCTGCCGTCCTGGCCTGTAACCATTGGCTATTATTCAACTGAAGAAG
ACAATTCCGAAACACCGCTCTACCAGATCAATTTTGACATGTATGAAAAC
GGCGTCTCCAACAGCCTGGTCATGGATTATGGAAGCTTTGCCCTCTCGGG
GAAATTGGCCCATCTCGAGCTCTTGAAGGCCGAAACGTGCCAATAG
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