mRNA_P-wetherbeei_contig15548.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15548.1.1 vs. uniprot
Match: A0A6H5L6F7_9PHAE (Importin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6F7_9PHAE) HSP 1 Score: 167 bits (422), Expect = 1.040e-45 Identity = 82/111 (73.87%), Postives = 96/111 (86.49%), Query Frame = 1
Query: 1 TPPQEASLCEYALQLLVHCLNYDFIGTNPDESSEDIGTIQVPSTWRDVVTDPATMTLLFDLYRTTEPPRSSLAMQAVILLSSVRRSLFAKETDRQAYLQQLMTFICEILQS 333
+P QEA++ E AL L CL+YDFIGTNPDESSED+GTIQVPS WRDVVTD +T +LLF+ Y+TT+PPRSS AMQ+++LLSSVRRSLFAKETDR AYLQQLM FI EILQ+
Sbjct: 204 SPAQEAAMLEQALSLCTRCLSYDFIGTNPDESSEDVGTIQVPSAWRDVVTDSSTFSLLFEFYKTTDPPRSSQAMQSIVLLSSVRRSLFAKETDRAAYLQQLMNFIREILQT 314
BLAST of mRNA_P-wetherbeei_contig15548.1.1 vs. uniprot
Match: A0A835YUW2_9STRA (RAN binding protein 16-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUW2_9STRA) HSP 1 Score: 156 bits (395), Expect = 4.560e-42 Identity = 77/108 (71.30%), Postives = 91/108 (84.26%), Query Frame = 1
Query: 4 PPQEASLCEYALQLLVHCLNYDFIGTNPDESSEDIGTIQVPSTWRDVVTDPATMTLLFDLYRTTEPPRSSLAMQAVILLSSVRRSLFAKETDRQAYLQQLMTFICEIL 327
P QEA++ E AL L CL++DFIGTNPDESSED+GTIQVP WR+V+TDPATMTL FD Y+TT+PPRSSLAMQ+VILLSSVRRSLF K+ DR A+LQ LM F+ +IL
Sbjct: 208 PKQEAAMGESALNLSQRCLSFDFIGTNPDESSEDVGTIQVPGAWREVITDPATMTLFFDFYKTTDPPRSSLAMQSVILLSSVRRSLFPKDADRAAFLQLLMDFLRDIL 315
BLAST of mRNA_P-wetherbeei_contig15548.1.1 vs. uniprot
Match: A0A4D9CV70_9STRA (Importin N-terminal domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CV70_9STRA) HSP 1 Score: 143 bits (360), Expect = 2.390e-37 Identity = 72/111 (64.86%), Postives = 89/111 (80.18%), Query Frame = 1
Query: 1 TPPQEASLCEYALQLLVHCLNYDFIGTNPDESSEDIGTIQVPSTWRDVVTDPATMTLLFDLYRTTEPPRSSLAMQAVILLSSVRRSLFAKETDRQAYLQQLMTFICEILQS 333
+P QE + E AL L V L++DFIGTNPDES+ED+GTIQVP+TWR +V +P TM+L D Y+ T+PP SSLA+QAVILLSSVRRSLFA + DR A+LQQL+T I EILQ+
Sbjct: 204 SPQQEVKIAEQALALSVRALSFDFIGTNPDESAEDVGTIQVPNTWRRLVQNPETMSLFLDFYKNTQPPSSSLALQAVILLSSVRRSLFATDKDRAAFLQQLVTAIREILQT 314
BLAST of mRNA_P-wetherbeei_contig15548.1.1 vs. uniprot
Match: A0A7S2V5L2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5L2_9STRA) HSP 1 Score: 128 bits (321), Expect = 1.430e-35 Identity = 64/110 (58.18%), Postives = 84/110 (76.36%), Query Frame = 1
Query: 1 TPPQEASLCEYALQLLVHCLNYDFIGTNPDESSEDIGTIQVPSTWRDVVTDPATMTLLFDLYRTTEPPRSSLAMQAVILLSSVRRSLFAKETDRQAYLQQLMTFICEILQ 330
TP QE + +L L +CL YDFIGTNPDES+ED+GTIQ+PS+WR VV D +TM LLF+ Y+T++P SS AMQ++ILLS+VRRSLF + DR A+L +LM + +ILQ
Sbjct: 33 TPEQEDKMATQSLTLSTNCLGYDFIGTNPDESAEDVGTIQIPSSWRSVVQDLSTMDLLFEFYKTSKPAASSQAMQSLILLSAVRRSLFPTDKDRAAFLARLMKGMRDILQ 142
BLAST of mRNA_P-wetherbeei_contig15548.1.1 vs. uniprot
Match: B8C1X0_THAPS (Importin N-terminal domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1X0_THAPS) HSP 1 Score: 132 bits (332), Expect = 1.420e-33 Identity = 66/110 (60.00%), Postives = 82/110 (74.55%), Query Frame = 1
Query: 4 PPQEASLCEYALQLLVHCLNYDFIGTNPDESSEDIGTIQVPSTWRDVVTDPATMTLLFDLYRTTEPPRSSLAMQAVILLSSVRRSLFAKETDRQAYLQQLMTFICEILQS 333
P QE + E AL L V CLN+DFIGTNPDES+ED+GTIQ PS WR V+ DP T LL D Y T+PPRSS AM+AVILL SVRRSLF + +R+A+L ++M I E+L++
Sbjct: 210 PQQEVIMGEQALSLTVRCLNFDFIGTNPDESTEDVGTIQAPSAWRPVLQDPGTTELLLDFYANTDPPRSSKAMEAVILLCSVRRSLFPSDKEREAFLGRVMAGIRELLKN 319
BLAST of mRNA_P-wetherbeei_contig15548.1.1 vs. uniprot
Match: A0A6U5EJC1_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5EJC1_9STRA) HSP 1 Score: 132 bits (331), Expect = 1.940e-33 Identity = 65/108 (60.19%), Postives = 86/108 (79.63%), Query Frame = 1
Query: 10 QEASLCEYALQLLVHCLNYDFIGTNPDESSEDIGTIQVPSTWRDVVTDPATMTLLFDLYRTTEPPRSSLAMQAVILLSSVRRSLFAKETDRQAYLQQLMTFICEILQS 333
QEA++ + +L L V CLN+DFIGTNPDES+ED+GTIQVP++WR +V DP+T+ LLF+ Y +TEPP SS AM+AVILL+S RRSLF + DR A+L+ +M I EI+ S
Sbjct: 207 QEAAIGDQSLGLCVRCLNFDFIGTNPDESAEDVGTIQVPASWRPIVQDPSTLELLFEFYSSTEPPCSSRAMEAVILLASCRRSLFPSDKDRAAFLEIIMRSIREIMAS 314
BLAST of mRNA_P-wetherbeei_contig15548.1.1 vs. uniprot
Match: A0A1E7FRK9_9STRA (Importin N-terminal domain-containing protein n=2 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FRK9_9STRA) HSP 1 Score: 130 bits (326), Expect = 9.150e-33 Identity = 65/108 (60.19%), Postives = 83/108 (76.85%), Query Frame = 1
Query: 4 PPQEASLCEYALQLLVHCLNYDFIGTNPDESSEDIGTIQVPSTWRDVVTDPATMTLLFDLYRTTEPPRSSLAMQAVILLSSVRRSLFAKETDRQAYLQQLMTFICEIL 327
P QE L E +L L V CL++DFIGTNPDES+ED+GTIQ P++WR ++ DPAT L F+ Y TT PPRSS AM+A+ILL+SVRRSLF + DR A+L +L+T I E+L
Sbjct: 211 PQQEKILGELSLALAVRCLSFDFIGTNPDESTEDVGTIQAPTSWRTLLQDPATTELFFEFYATTAPPRSSKAMEAIILLASVRRSLFPTDKDRAAFLGRLITGIREML 318
BLAST of mRNA_P-wetherbeei_contig15548.1.1 vs. uniprot
Match: H3GGA7_PHYRM (Importin N-terminal domain-containing protein n=22 Tax=Peronosporaceae TaxID=4777 RepID=H3GGA7_PHYRM) HSP 1 Score: 129 bits (324), Expect = 1.710e-32 Identity = 59/111 (53.15%), Postives = 86/111 (77.48%), Query Frame = 1
Query: 1 TPPQEASLCEYALQLLVHCLNYDFIGTNPDESSEDIGTIQVPSTWRDVVTDPATMTLLFDLYRTTEPPRSSLAMQAVILLSSVRRSLFAKETDRQAYLQQLMTFICEILQS 333
+P QE+ + + AL LL+ CL++DFIGTNPDESSE+ G++QVPS+WR V+ DP T+ LLFD Y+TT PP +S ++A++L +SVRR++F+ E +R AYL L+ IC IL++
Sbjct: 204 SPQQESRMGDQALALLIKCLSFDFIGTNPDESSEETGSLQVPSSWRPVIQDPDTLKLLFDFYKTTNPPNTSKCLEALMLFASVRRNIFSPEKERSAYLAHLLEGICSILRA 314
BLAST of mRNA_P-wetherbeei_contig15548.1.1 vs. uniprot
Match: B7FRZ4_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FRZ4_PHATC) HSP 1 Score: 127 bits (320), Expect = 5.900e-32 Identity = 63/102 (61.76%), Postives = 81/102 (79.41%), Query Frame = 1
Query: 22 LCEYALQLLVHCLNYDFIGTNPDESSEDIGTIQVPSTWRDVVTDPATMTLLFDLYRTTEPPRSSLAMQAVILLSSVRRSLFAKETDRQAYLQQLMTFICEIL 327
L E AL L V CLN+DFIGTNPDES+ED+GTIQ P++WR +++DPAT LLF+ Y TEPP+SS AM+A+ILLSSVRRSLF + DR +L +L+T I E++
Sbjct: 209 LGEQALSLTVRCLNFDFIGTNPDESTEDVGTIQAPTSWRPLLSDPATTELLFEFYANTEPPQSSKAMEALILLSSVRRSLFPTDKDRAVFLGRLITGIREMM 310
BLAST of mRNA_P-wetherbeei_contig15548.1.1 vs. uniprot
Match: A0A2D5QBB5_9EURY (Importin N-terminal domain-containing protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2D5QBB5_9EURY) HSP 1 Score: 127 bits (320), Expect = 5.900e-32 Identity = 59/104 (56.73%), Postives = 82/104 (78.85%), Query Frame = 1
Query: 22 LCEYALQLLVHCLNYDFIGTNPDESSEDIGTIQVPSTWRDVVTDPATMTLLFDLYRTTEPPRSSLAMQAVILLSSVRRSLFAKETDRQAYLQQLMTFICEILQS 333
+C +AL + CL++DFIGTNP+ES+ED+GT+QVPS+WR +V D AT+ L FD+Y TEPPRS+ A++ ++ LSSVRRSLF+ E +R A+LQ LMT I ++L S
Sbjct: 213 MCNFALSMANSCLSFDFIGTNPEESAEDVGTVQVPSSWRSLVQDTATLQLFFDIYANTEPPRSNQALECLVQLSSVRRSLFSSEKERTAFLQALMTGIHDVLTS 316 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15548.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15548.1.1 >prot_P-wetherbeei_contig15548.1.1 ID=prot_P-wetherbeei_contig15548.1.1|Name=mRNA_P-wetherbeei_contig15548.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=111bp TPPQEASLCEYALQLLVHCLNYDFIGTNPDESSEDIGTIQVPSTWRDVVTback to top mRNA from alignment at P-wetherbeei_contig15548:576..1248+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15548.1.1 ID=mRNA_P-wetherbeei_contig15548.1.1|Name=mRNA_P-wetherbeei_contig15548.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=673bp|location=Sequence derived from alignment at P-wetherbeei_contig15548:576..1248+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15548:576..1248+ >mRNA_P-wetherbeei_contig15548.1.1 ID=mRNA_P-wetherbeei_contig15548.1.1|Name=mRNA_P-wetherbeei_contig15548.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=333bp|location=Sequence derived from alignment at P-wetherbeei_contig15548:576..1248+ (Phaeothamnion wetherbeei SAG_119_79)back to top |