mRNA_P-wetherbeei_contig15546.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15546.1.1
Unique NamemRNA_P-wetherbeei_contig15546.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig15546.1.1 vs. uniprot
Match: D7FKQ0_ECTSI (Kinesin motor domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKQ0_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 2.810e-39
Identity = 86/139 (61.87%), Postives = 105/139 (75.54%), Query Frame = 1 
Query:   25 EAAQIKKALSNLGTIIKGLARGDRRAGLPYRDSTLTWLLKEGLGGRARMSMLATVAPCADAYVETMSTLKYAERWTRQPATLPSRGPAGSAEQDPSAAAALRAEVQALLSQLGAEGTAAARQVLYQTVADPQQRIAKLT 441
            E AQIKKALSNLG IIKGL+RGD   GLP+RDS LTWLLKE L GRA  +MLATV+P +++YVETMSTLKYAER  +  A L ++   G+    PS    ++ E+ +L+ +LGA+G  A RQVLYQTV+DPQQRIAKLT
Sbjct:  490 ETAQIKKALSNLGIIIKGLSRGDTPVGLPFRDSILTWLLKEALSGRAHTTMLATVSPSSNSYVETMSTLKYAERLKKANAHL-NKDSGGARVTTPSDG--MKKEMASLVEKLGADGIEAKRQVLYQTVSDPQQRIAKLT 625
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BLAST of mRNA_P-wetherbeei_contig15546.1.1 vs. uniprot
Match: S4RJ73_PETMA (Kinesin-like protein n=2 Tax=Petromyzon marinus TaxID=7757 RepID=S4RJ73_PETMA)

HSP 1 Score: 87.0 bits (214), Expect = 1.190e-17
Identity = 47/88 (53.41%), Postives = 60/88 (68.18%), Query Frame = 1 
Query:   10 GDDGAEAAQIKKALSNLGTIIKGLARGDRRAG------LPYRDSTLTWLLKEGLGGRARMSMLATVAPCADAYVETMSTLKYAERWTR 255
            GD   E + I K+LS LG +I  LA  D+ AG      +PYRDS LTWLLK+ LGG +R +M+ATV+P AD Y ET+STL+YA+R  R
Sbjct:  194 GDRLKEGSNINKSLSTLGLVISALA--DQAAGKNKNKFVPYRDSALTWLLKDNLGGNSRTAMVATVSPAADNYEETLSTLRYADRAKR 279
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BLAST of mRNA_P-wetherbeei_contig15546.1.1 vs. uniprot
Match: A0A7I8VWW7_9ANNE (DgyrCDS8585 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VWW7_9ANNE)

HSP 1 Score: 84.0 bits (206), Expect = 1.960e-17
Identity = 43/84 (51.19%), Postives = 57/84 (67.86%), Query Frame = 1 
Query:   10 GDDGAEAAQIKKALSNLGTIIKGLARGDRRAG--LPYRDSTLTWLLKEGLGGRARMSMLATVAPCADAYVETMSTLKYAERWTR 255
            G+   E + I K+L+ LG +I  LA  D  +   +PYRDS LTWLLK+ LGG ++  MLATV+P AD Y ET+STL+YA+R  R
Sbjct:   29 GERLKEGSNINKSLTTLGLVISALAEQDSASSKFVPYRDSVLTWLLKDNLGGNSKTVMLATVSPSADNYDETLSTLRYADRAKR 112
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BLAST of mRNA_P-wetherbeei_contig15546.1.1 vs. uniprot
Match: A0A8C6LQP3_NOTFU (Kinesin family member 13Bb n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A8C6LQP3_NOTFU)

HSP 1 Score: 87.8 bits (216), Expect = 2.360e-17
Identity = 46/85 (54.12%), Postives = 59/85 (69.41%), Query Frame = 1 
Query:   10 GDDGAEAAQIKKALSNLGTIIKGLARGDRRAG------LPYRDSTLTWLLKEGLGGRARMSMLATVAPCADAYVETMSTLKYAER 246
            GD   E + I K+LS LG +I  LA  DR AG      +PYRDS LTWLLK+ LGG +R +M+AT++P AD Y ET+STL+YA+R
Sbjct:  227 GDQLKEGSNINKSLSTLGLVISALA--DRGAGKNKSKFVPYRDSVLTWLLKDSLGGNSRTAMVATISPAADNYDETLSTLRYADR 309
[Close]
BLAST of mRNA_P-wetherbeei_contig15546.1.1 vs. uniprot
Match: A0A8C6NTK1_NOTFU (Kinesin family member 13Bb n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A8C6NTK1_NOTFU)

HSP 1 Score: 87.8 bits (216), Expect = 2.360e-17
Identity = 46/85 (54.12%), Postives = 59/85 (69.41%), Query Frame = 1 
Query:   10 GDDGAEAAQIKKALSNLGTIIKGLARGDRRAG------LPYRDSTLTWLLKEGLGGRARMSMLATVAPCADAYVETMSTLKYAER 246
            GD   E + I K+LS LG +I  LA  DR AG      +PYRDS LTWLLK+ LGG +R +M+AT++P AD Y ET+STL+YA+R
Sbjct:  227 GDQLKEGSNINKSLSTLGLVISALA--DRGAGKNKSKFVPYRDSVLTWLLKDSLGGNSRTAMVATISPAADNYDETLSTLRYADR 309
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BLAST of mRNA_P-wetherbeei_contig15546.1.1 vs. uniprot
Match: A0A4W5L0J6_9TELE (Kinesin motor domain-containing protein n=1 Tax=Hucho hucho TaxID=62062 RepID=A0A4W5L0J6_9TELE)

HSP 1 Score: 84.7 bits (208), Expect = 2.380e-17
Identity = 45/85 (52.94%), Postives = 59/85 (69.41%), Query Frame = 1 
Query:   10 GDDGAEAAQIKKALSNLGTIIKGLARGDRRAG------LPYRDSTLTWLLKEGLGGRARMSMLATVAPCADAYVETMSTLKYAER 246
            G+   E + I K+LS LG +I  LA  D+ AG      +PYRDS LTWLLK+ LGG +R +M+ATV+P AD Y ET+STL+YA+R
Sbjct:  100 GERMKEGSNINKSLSTLGLVISALA--DQGAGKNKTKFVPYRDSVLTWLLKDSLGGNSRTAMVATVSPAADNYDETLSTLRYADR 182
[Close]
BLAST of mRNA_P-wetherbeei_contig15546.1.1 vs. uniprot
Match: A0A8C6LTW4_NOTFU (Kinesin family member 13Bb n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A8C6LTW4_NOTFU)

HSP 1 Score: 87.8 bits (216), Expect = 2.390e-17
Identity = 46/85 (54.12%), Postives = 59/85 (69.41%), Query Frame = 1 
Query:   10 GDDGAEAAQIKKALSNLGTIIKGLARGDRRAG------LPYRDSTLTWLLKEGLGGRARMSMLATVAPCADAYVETMSTLKYAER 246
            GD   E + I K+LS LG +I  LA  DR AG      +PYRDS LTWLLK+ LGG +R +M+AT++P AD Y ET+STL+YA+R
Sbjct:  227 GDQLKEGSNINKSLSTLGLVISALA--DRGAGKNKSKFVPYRDSVLTWLLKDSLGGNSRTAMVATISPAADNYDETLSTLRYADR 309
[Close]
BLAST of mRNA_P-wetherbeei_contig15546.1.1 vs. uniprot
Match: A0A8C6LWC5_NOTFU (Kinesin family member 13Bb n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A8C6LWC5_NOTFU)

HSP 1 Score: 87.8 bits (216), Expect = 2.400e-17
Identity = 46/85 (54.12%), Postives = 59/85 (69.41%), Query Frame = 1 
Query:   10 GDDGAEAAQIKKALSNLGTIIKGLARGDRRAG------LPYRDSTLTWLLKEGLGGRARMSMLATVAPCADAYVETMSTLKYAER 246
            GD   E + I K+LS LG +I  LA  DR AG      +PYRDS LTWLLK+ LGG +R +M+AT++P AD Y ET+STL+YA+R
Sbjct:  239 GDQLKEGSNINKSLSTLGLVISALA--DRGAGKNKSKFVPYRDSVLTWLLKDSLGGNSRTAMVATISPAADNYDETLSTLRYADR 321
[Close]
BLAST of mRNA_P-wetherbeei_contig15546.1.1 vs. uniprot
Match: A0A8C6LU34_NOTFU (Kinesin family member 13Bb n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A8C6LU34_NOTFU)

HSP 1 Score: 87.8 bits (216), Expect = 2.400e-17
Identity = 46/85 (54.12%), Postives = 59/85 (69.41%), Query Frame = 1 
Query:   10 GDDGAEAAQIKKALSNLGTIIKGLARGDRRAG------LPYRDSTLTWLLKEGLGGRARMSMLATVAPCADAYVETMSTLKYAER 246
            GD   E + I K+LS LG +I  LA  DR AG      +PYRDS LTWLLK+ LGG +R +M+AT++P AD Y ET+STL+YA+R
Sbjct:  264 GDQLKEGSNINKSLSTLGLVISALA--DRGAGKNKSKFVPYRDSVLTWLLKDSLGGNSRTAMVATISPAADNYDETLSTLRYADR 346
[Close]
BLAST of mRNA_P-wetherbeei_contig15546.1.1 vs. uniprot
Match: A0A1V9YZE0_9STRA (Kinesin-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YZE0_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 3.210e-17
Identity = 43/78 (55.13%), Postives = 57/78 (73.08%), Query Frame = 1 
Query:   10 GDDGAEAAQIKKALSNLGTIIKGLARGDRRAGLPYRDSTLTWLLKEGLGGRARMSMLATVAPCADAYVETMSTLKYAE 243
            G+   EA+ I ++LS LG +I  L+  +R   +PYRDSTLTWLLKE LGG A+ +MLA V+P +D Y ET+STL+YAE
Sbjct:  293 GERLKEASMINRSLSTLGRVISSLSSNER---IPYRDSTLTWLLKESLGGNAKTTMLAMVSPASDNYEETLSTLRYAE 367
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15546.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKQ0_ECTSI2.810e-3961.87Kinesin motor domain-containing protein n=2 Tax=Ec... [more]
S4RJ73_PETMA1.190e-1753.41Kinesin-like protein n=2 Tax=Petromyzon marinus Ta... [more]
A0A7I8VWW7_9ANNE1.960e-1751.19DgyrCDS8585 n=1 Tax=Dimorphilus gyrociliatus TaxID... [more]
A0A8C6LQP3_NOTFU2.360e-1754.12Kinesin family member 13Bb n=1 Tax=Nothobranchius ... [more]
A0A8C6NTK1_NOTFU2.360e-1754.12Kinesin family member 13Bb n=1 Tax=Nothobranchius ... [more]
A0A4W5L0J6_9TELE2.380e-1752.94Kinesin motor domain-containing protein n=1 Tax=Hu... [more]
A0A8C6LTW4_NOTFU2.390e-1754.12Kinesin family member 13Bb n=1 Tax=Nothobranchius ... [more]
A0A8C6LWC5_NOTFU2.400e-1754.12Kinesin family member 13Bb n=1 Tax=Nothobranchius ... [more]
A0A8C6LU34_NOTFU2.400e-1754.12Kinesin family member 13Bb n=1 Tax=Nothobranchius ... [more]
A0A1V9YZE0_9STRA3.210e-1755.13Kinesin-like protein n=1 Tax=Achlya hypogyna TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15546contigP-wetherbeei_contig15546:99..1053 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FKQ0
PFAMsKinesin
Model size441
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue4.61e-40
EggNOG OGsCOG5059@1|root,KOG0241@2759|Eukaryota
Ec32 ortholog descriptionKinesin motor domain
Ec32 orthologEc-21_001690.1
Descriptionmicrotubule motor activity
Cds size441
COG categoryZ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186059.4520392-CDS-P-wetherbeei_contig15546:98..3471683186059.4520392-CDS-P-wetherbeei_contig15546:98..347Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15546 99..347 +
1683186059.4635475-CDS-P-wetherbeei_contig15546:637..7781683186059.4635475-CDS-P-wetherbeei_contig15546:637..778Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15546 638..778 +
1683186059.4730594-CDS-P-wetherbeei_contig15546:1002..10531683186059.4730594-CDS-P-wetherbeei_contig15546:1002..1053Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15546 1003..1053 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15546.1.1prot_P-wetherbeei_contig15546.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15546 99..1053 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15546.1.1

>prot_P-wetherbeei_contig15546.1.1 ID=prot_P-wetherbeei_contig15546.1.1|Name=mRNA_P-wetherbeei_contig15546.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=147bp
MWWGDDGAEAAQIKKALSNLGTIIKGLARGDRRAGLPYRDSTLTWLLKEG
LGGRARMSMLATVAPCADAYVETMSTLKYAERWTRQPATLPSRGPAGSAE
QDPSAAAALRAEVQALLSQLGAEGTAAARQVLYQTVADPQQRIAKLT
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mRNA from alignment at P-wetherbeei_contig15546:99..1053+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15546.1.1 ID=mRNA_P-wetherbeei_contig15546.1.1|Name=mRNA_P-wetherbeei_contig15546.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=955bp|location=Sequence derived from alignment at P-wetherbeei_contig15546:99..1053+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTGGTGGGGTGATGACGGAGCAGAGGCGGCGCAGATCAAAAAGGCGCT
GAGCAACCTCGGCACCATCATCAAGGGGCTGGCGCGCGGGGATCGGCGGG
CGGGGCTGCCCTATCGTGACTCGACGCTGACGTGGCTGCTGAAGGAAGGC
CTTGGGGGCCGCGCCCGAATGAGCATGCTGGCCACGGTGGCGCCGTGCGC
CGACGCGTACGTGGAGACCATGAGCACCCTCAAATACGCCGAGAGGTGGG
TTCTTCTTCATTTTTCATAGTGTCTCTTTGTTTGAGAAGACTAGTCGAGG
AGTTTTTTGTTTCGTTGTTGAGCGCTTTTGAATTTGGGAGCTATTTCCTG
CTTGCTTCGATTTCCGCGTTCCTTTTTGTTTGCGTTCAGCTTCGTTTCCG
TGGCTTTTTGGTGCCCTGCTGCGGTTGCTCTTCTCCCAAACCTCCACTTA
TCATATGGCTACGGAATACAAACACATTCTAATTGCAACGAACCTGCGTT
TACCCCTTTCTCGAATTTCCCTTCCAAAGGCTGCGCAAGACGCGGCAGCC
GGCAACGCTGCCTTCCCGGGGGCCGGCGGGGAGCGCTGAGCAGGATCCAT
CGGCAGCCGCGGCTCTGCGGGCGGAAGTGCAGGCGCTGCTGTCCCAGCTG
GGGGCCGAGGGAACGGCGGCGGCCAGACAGGTGCGGCGGCAGCGTAACCA
TTTAAACTCGACCGCACTTTCTTTGCAAACGGCCTCTGGAATGGTCACAT
CGTCCTTTGGTCTTCCCCCCCGGCCACCTTGCTGCGTATCAGCGTGTCTT
CGAGGCGCGTGATGGTCTGTCGACTTTCCATGAACACTTTACTCTACCCA
ATCGCTGTCGCTCTTCCCTGCCTGTTTCATGATTCGATCACACTGTGCCG
GCAGGTGCTGTATCAGACGGTGGCGGACCCGCAGCAGCGCATTGCCAAGC
TGACG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15546:99..1053+

>mRNA_P-wetherbeei_contig15546.1.1 ID=mRNA_P-wetherbeei_contig15546.1.1|Name=mRNA_P-wetherbeei_contig15546.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=441bp|location=Sequence derived from alignment at P-wetherbeei_contig15546:99..1053+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTGGTGGGGTGATGACGGAGCAGAGGCGGCGCAGATCAAAAAGGCGCT
GAGCAACCTCGGCACCATCATCAAGGGGCTGGCGCGCGGGGATCGGCGGG
CGGGGCTGCCCTATCGTGACTCGACGCTGACGTGGCTGCTGAAGGAAGGC
CTTGGGGGCCGCGCCCGAATGAGCATGCTGGCCACGGTGGCGCCGTGCGC
CGACGCGTACGTGGAGACCATGAGCACCCTCAAATACGCCGAGAGGTGGA
CGCGGCAGCCGGCAACGCTGCCTTCCCGGGGGCCGGCGGGGAGCGCTGAG
CAGGATCCATCGGCAGCCGCGGCTCTGCGGGCGGAAGTGCAGGCGCTGCT
GTCCCAGCTGGGGGCCGAGGGAACGGCGGCGGCCAGACAGGTGCTGTATC
AGACGGTGGCGGACCCGCAGCAGCGCATTGCCAAGCTGACG
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