mRNA_P-wetherbeei_contig15540.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15540.2.1
Unique NamemRNA_P-wetherbeei_contig15540.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15540.2.1 vs. uniprot
Match: A0A0F9D507_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9D507_9ZZZZ)

HSP 1 Score: 109 bits (272), Expect = 1.040e-24
Identity = 61/166 (36.75%), Postives = 99/166 (59.64%), Query Frame = 1
Query:    1 EFAWVIPVQSRPKITV--EKGAPFTELRRLTEIRVPQPVRASMPGSARGGAAPPAAVTVLERKEEGPYDLAVLGSTSSGELYKWLKQNDFRISKDAKASLDYYVQHKFVFVAARIRNGSKDNAAISQRLRDGNIAPMHLVFKSPRVTYPLKVTSLNRGDSDMEIYV 492
            +FAW++P+ SRPK+T    + +PF E+ R T++R    +  S     RG       VTVLERK  G YD+AVL +T +  L  WLK+N + + K  +A L  YV+ K+V+VA RI   +     + ++L+ G + P+   F S R+ YPL+++S+N G +++ +Y+
Sbjct:   88 DFAWIVPLPSRPKVTAIAPEKSPFAEISRFTQVRQRYEIAMS-----RGKGVEQ--VTVLERKVVGVYDIAVLAATDAQALGDWLKRNGYALPKKLQAVLAQYVKKKWVYVAMRIDRKALATDEV-KKLKSGELQPVRFSFASKRMVYPLRISSVNAGQTEVLLYL 245          
BLAST of mRNA_P-wetherbeei_contig15540.2.1 vs. uniprot
Match: A0A7C6F4X6_9BACT (DUF2330 domain-containing protein n=1 Tax=Bryobacteraceae bacterium TaxID=2212468 RepID=A0A7C6F4X6_9BACT)

HSP 1 Score: 105 bits (263), Expect = 1.770e-24
Identity = 62/153 (40.52%), Postives = 83/153 (54.25%), Query Frame = 1
Query:    4 FAWVIPVQSRPKITVEKGAPFTELRRLTEIRVPQPVRASMPGSARGGAAPPAAVTVLERKEEGPYDLAVLGSTSSGELYKWLKQNDFRISKDAKASLDYYVQHKFVFVAARIRNGSKDNAAISQRLRDGNIAPMHLVFKSPRVTYPLKVTSLN 462
            FAW+IPV SRPK+    GA F EL +L   R P+       G  + G      VTVLERK+ G YD+AVL +  S  LY+WL+ N F +   AK  LD ++  K+ FVAAR+       A     L  G +AP+ L F++    YPL+V+  N
Sbjct:   79 FAWIIPVPSRPKVDKVDGALFHELAKLAFPRRPKRKGTEGIGDTKAG------VTVLERKQVGAYDVAVLSAADSKALYRWLRANKFAVPPAAKERLDPHIAEKWTFVAARVNVRRAAGA-----LTTGTLAPIRLTFRTSEPIYPLRVSGAN 220          
BLAST of mRNA_P-wetherbeei_contig15540.2.1 vs. uniprot
Match: A0A7J4P8Y0_9ARCH (DUF2330 domain-containing protein n=1 Tax=Thermoplasmata archaeon TaxID=1906666 RepID=A0A7J4P8Y0_9ARCH)

HSP 1 Score: 97.4 bits (241), Expect = 4.590e-21
Identity = 55/164 (33.54%), Postives = 83/164 (50.61%), Query Frame = 1
Query:    1 EFAWVIPVQSRPKITVEKGAPFTELRRLTEIRVPQPVRASMPGSARGGAAPPAAVTVLERKEEGPYDLAVLGSTSSGELYKWLKQNDFRISKDAKASLDYYVQHKFVFVAARIRNGSKDNAAISQRLRDGNIAPMHLVFKSPRVTYPLKVTSLNRGDSDMEIYV 492
            +FAWV+PV S P+I  E    F+EL  LT       +        RG       VTV ERK  G YD A L S     L  WLK+N +   +DAK  +D+Y++  + FVA +I    +       +   G I P+   FK+  + YPLK++++N G++ + +Y+
Sbjct:   99 DFAWVVPVPSLPEIKAENFEIFSELSNLTTPSYYYEL------GRRGDMLKE--VTVYERKRVGSYDTATLSSEDPDSLINWLKENGYNFPEDAKDIIDHYIEKNWYFVAMKIAEEKQQEPYPLPQTPGGTIHPVKFSFKTNEIVYPLKISAINEGETQILLYI 254          
BLAST of mRNA_P-wetherbeei_contig15540.2.1 vs. uniprot
Match: A0A7V5G9P2_9BACT (DUF2330 domain-containing protein n=1 Tax=Candidatus Portnoybacteria bacterium TaxID=2053593 RepID=A0A7V5G9P2_9BACT)

HSP 1 Score: 94.4 bits (233), Expect = 2.690e-20
Identity = 56/155 (36.13%), Postives = 85/155 (54.84%), Query Frame = 1
Query:    1 EFAWVIPVQSRPKITVEKGAPFTELRRLTEIRVP--QPVRASMPGSARGGAAPPAAVTVLERKEEGPYDLAVLGSTSSGELYKWLKQNDFRISKDAKASLDYYVQHKFVFVAARIRNGSKDNAAISQRLRDGNIAPMHLVFKSPRVTYPLKVTSL 459
            +FAW+IPV SRPKI       FT L  LT+I     +PV     G      + P  V V E K+   YDLAVL +  S  L  WL QN +   K+    L+ Y+++ + FVAA+I      N  I+Q+++ G++ P+ + F + R+ YPL+++S+
Sbjct:    1 DFAWIIPVPSRPKIERSSDELFTSLNDLTKIERDWERPVPLINGGRILKNESSP--VIVWETKKVEYYDLAVLSANDSHSLVNWLNQNGYHYPKEYDYILNDYIKNNWFFVAAKIDLNVAQNQDINQQIKTGHLIPLKISFPTSRIVYPLRISSI 153          
BLAST of mRNA_P-wetherbeei_contig15540.2.1 vs. uniprot
Match: A0A7V4STV3_9BACT (DUF2330 domain-containing protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V4STV3_9BACT)

HSP 1 Score: 95.5 bits (236), Expect = 4.520e-20
Identity = 59/172 (34.30%), Postives = 94/172 (54.65%), Query Frame = 1
Query:    1 EFAWVIPVQSRPKITVEKGAPFTELRRLTEIRVP------QPVRASMPG--SARGGAAPPAAVTVLERKEEGPYDLAVLGSTSSGELYKWLKQNDFRISKDAKASLDYYVQHKFVFVAARIRNGSKDNAAISQRLRDGNIAPMHLVFKSPRVTYPLKVTSLNRGDSDMEIYV 492
            EF W++P  SRP+++      F  L   T  ++       Q +R    G  +A  GA     V VLE K+ G YD+AVL +  + +L +WL+QN ++I+      +  Y++  +VF A RI  G +D A  +QRLR+G +  +   F++    YPL+V+SLNRG + + +YV
Sbjct:   72 EFVWLVPTPSRPQVSKVDSPIFHWLHNATAPKIKYWFDADQKIRGFYHGGKAATLGAPGGLDVRVLEEKQVGVYDIAVLRAGDADDLLQWLRQNGYQITPKLIPVVSDYIRRGWVFTAMRINTGYQDRA--TQRLREGVLQSLKFKFRTSEPIYPLRVSSLNRGKTKILLYV 241          
BLAST of mRNA_P-wetherbeei_contig15540.2.1 vs. uniprot
Match: A0A661WY01_9BACT (Uncharacterized protein n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A661WY01_9BACT)

HSP 1 Score: 95.9 bits (237), Expect = 5.440e-20
Identity = 54/164 (32.93%), Postives = 92/164 (56.10%), Query Frame = 1
Query:    1 EFAWVIPVQSRPKITVEKGAPFTELRRLTEIRVPQPVRASMPGSARGGAAPPAAVTVLERKEEGPYDLAVLGSTSSGELYKWLKQNDFRISKDAKASLDYYVQHKFVFVAARIRNGSKDNAAISQRLRDGNIAPMHLVFKSPRVTYPLKVTSLNRGDSDMEIYV 492
            +FAW++P+ ++P ++  +   F+EL   T+ R       +  G    G   P  V VL+RK+ G YD+AVL + ++  L +WL +N + I +  KA L  Y+   +VF A RI +  ++   + + L  G + P+   FKS    YPLK++SLN+G +++ +YV
Sbjct:   63 DFAWLVPLPAKPDVSAVQCPIFSELSEYTQKRQRW---YAFYGFTPRGEHRPGKVKVLDRKKVGVYDVAVLETDTTEALMQWLSENGYSIPEKGKALLREYIGKGWVFTALRI-HPEEEKLWVEKALNKGTLIPLKFTFKSRHAIYPLKISSLNKGPTEVLLYV 222          
BLAST of mRNA_P-wetherbeei_contig15540.2.1 vs. uniprot
Match: A0A7C4M1L0_9BACT (DUF2330 domain-containing protein n=1 Tax=candidate division CPR3 bacterium TaxID=2268181 RepID=A0A7C4M1L0_9BACT)

HSP 1 Score: 94.4 bits (233), Expect = 1.310e-19
Identity = 57/157 (36.31%), Postives = 88/157 (56.05%), Query Frame = 1
Query:    1 EFAWVIPVQSRPKITVEKGAP--FTELRRLTEIR--VPQPVRASMPGSARGGAAPPAAVTVLERKEEGPYDLAVLGSTSSGELYKWLKQNDFRISKDAKASLDYYVQHKFVFVAARIRNGSKDNAAISQRLRDGNIAPMHLVFKSPRVTYPLKVTSL 459
            +FAW+IP  S+P+++  KGA   F  L +LT +     +   +   G     AAP    TV+E+K+ G YD+ VL S     LY WLK N +      K  LD Y+Q+K+ F A +I N  ++   + + LR G I P+ LVFK+ ++ +PLK++S+
Sbjct:   64 DFAWIIPTPSKPEVS--KGAVDIFEALEKLTNVNHGSNRIYNSLSLGEKTYDAAP--TTTVIEKKKVGFYDIVVLESNDKDSLYNWLKDNSYNYPSYGKTILDDYIQNKWFFTAVKINN--ENIKEVQRDLRLGTITPLKLVFKTDKIIFPLKISSI 214          
BLAST of mRNA_P-wetherbeei_contig15540.2.1 vs. uniprot
Match: A0A847JW28_9BACT (DUF2330 domain-containing protein n=1 Tax=Chthonomonadales bacterium TaxID=2282151 RepID=A0A847JW28_9BACT)

HSP 1 Score: 92.8 bits (229), Expect = 1.900e-19
Identity = 60/163 (36.81%), Postives = 92/163 (56.44%), Query Frame = 1
Query:    4 FAWVIPVQSRPKITVEKGAPFTELRRLTEIRVPQPVRASMPGSARGGAAPPAAVTVLERKEEGPYDLAVLGSTSSGELYKWLKQNDFRISKDAKASLDYYVQHKFVFVAARIRNGSKDNAAISQRLRDGNIAPMHLVFKSPRVTYPLKVTSLNRGDSDMEIYV 492
            FAW+IPV SRP +  + GA F EL RL      +  R+   G+A  G    A V VLERK+ G YD+AVL +     L  WLK N F ++  A+A +  Y++  + FVAAR+   +  +AA  + L  G +AP+ + F++ +  YPL++++ N     + +YV
Sbjct:  109 FAWIIPVPSRPTVKKQDGALFHELARLIRPLGKKSTRSK--GAA--GIERAAPVEVLERKQVGAYDVAVLKADDPKALLSWLKANRFAVTPAAEAPIQAYIKEGWTFVAARV---NVPDAA--RGLSAGTLAPIRMTFRTAQPIYPLRLSAANPDPFVVLVYV 262          
BLAST of mRNA_P-wetherbeei_contig15540.2.1 vs. uniprot
Match: A0A1F8MC24_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium RBG_13_51_36 TaxID=1797625 RepID=A0A1F8MC24_9CHLR)

HSP 1 Score: 86.7 bits (213), Expect = 4.900e-17
Identity = 52/160 (32.50%), Postives = 86/160 (53.75%), Query Frame = 1
Query:    1 EFAWVIPVQSRPKITVEKGAPFTELRRLTEIRVPQPVRASMPGSARGGAAPPA--AVTVLERKEEGPYDLAVLGSTSSGELYKWLKQNDFRISKDAKASLDYYVQHKFVFVAARIRNGSKDNAAISQRLRDGNIAPMHLVFKSPRVTYPLKVTSLNRGDS 474
            +FAWV+PV S+P+ITV     F EL   T   +P        G   GGA  P    V V+E +  GPY  A+L +T++  L  WL  N +   ++ +  +  Y+++++ FVA +I N   +    +  L +G I P+ L F+S  + +PL+++SL+  +S
Sbjct:   80 DFAWVVPVPSKPEITVTDPELFWELSDFTATEIPS---GHGLGCGAGGAGAPDQNGVDVIEEEVVGPYATAILSATNATALADWLNANGYAFPQEGEEIISEYIENEWYFVATKI-NAVDEGTGYA--LAEGAIEPIVLSFESEEIVFPLRISSLSASNS 233          
BLAST of mRNA_P-wetherbeei_contig15540.2.1 vs. uniprot
Match: UPI001AC52C36 (Uncharacterized protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=UPI001AC52C36)

HSP 1 Score: 71.2 bits (173), Expect = 1.550e-11
Identity = 46/167 (27.54%), Postives = 85/167 (50.90%), Query Frame = 1
Query:    7 AWVIPVQSRPKITVEKGAPFTELRRLTEIRVPQ---PVRASMPGSARGGAAPPAAVTVLERKEEGPYDLAVLGSTSSGELYKWLKQNDF--RISKDAKASLDYYVQHKFVFVAARIRNGSKDNAAISQRLRDGNIAPMHLVFKSPRVTYPLKVTSLNRGDSDMEIYV 492
            A ++PV +R ++ +     F EL   T+ ++ +   P +  +   A  G A   AVTVLERK+ GP+D++ L ++ +  L +WLK N +    S     +L  Y    + F+A R++ G      +S  +  GN+ P+ + F + ++ YP++ ++       + IYV
Sbjct:   70 AIILPVPARAELKLGDAKIFDELAEFTKPKIEERRVPAKLMLGAGAMPGEA---AVTVLERKQLGPFDVSNLAASDANALGEWLKANGYYQNFSPRLAQTLQPYADQGWYFIAVRVQPG------VSGDMLKGNLDPLWVTFAADKLVYPMRASANATNRQAVTIYV 227          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15540.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A0F9D507_9ZZZZ1.040e-2436.75Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A0A7C6F4X6_9BACT1.770e-2440.52DUF2330 domain-containing protein n=1 Tax=Bryobact... [more]
A0A7J4P8Y0_9ARCH4.590e-2133.54DUF2330 domain-containing protein n=1 Tax=Thermopl... [more]
A0A7V5G9P2_9BACT2.690e-2036.13DUF2330 domain-containing protein n=1 Tax=Candidat... [more]
A0A7V4STV3_9BACT4.520e-2034.30DUF2330 domain-containing protein n=1 Tax=Armatimo... [more]
A0A661WY01_9BACT5.440e-2032.93Uncharacterized protein n=1 Tax=Chlamydiae bacteri... [more]
A0A7C4M1L0_9BACT1.310e-1936.31DUF2330 domain-containing protein n=1 Tax=candidat... [more]
A0A847JW28_9BACT1.900e-1936.81DUF2330 domain-containing protein n=1 Tax=Chthonom... [more]
A0A1F8MC24_9CHLR4.900e-1732.50Uncharacterized protein n=1 Tax=Chloroflexi bacter... [more]
UPI001AC52C361.550e-1127.54Uncharacterized protein n=1 Tax=Anaerolineae bacte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15540contigP-wetherbeei_contig15540:1109..1600 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1123320.KB889714_gene8094
PFAMsDUF2330
Model size492
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.57e-15
EggNOG OGsCOG4402@1|root,COG4402@2|Bacteria,2I90K@201174|Actinobacteria
DescriptionUncharacterized protein conserved in bacteria (DUF2330)
Cds size492
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186059.357173-CDS-P-wetherbeei_contig15540:1108..16001683186059.357173-CDS-P-wetherbeei_contig15540:1108..1600Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15540 1109..1600 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15540.2.1prot_P-wetherbeei_contig15540.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15540 1109..1600 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15540.2.1

>prot_P-wetherbeei_contig15540.2.1 ID=prot_P-wetherbeei_contig15540.2.1|Name=mRNA_P-wetherbeei_contig15540.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=164bp
EFAWVIPVQSRPKITVEKGAPFTELRRLTEIRVPQPVRASMPGSARGGAA
PPAAVTVLERKEEGPYDLAVLGSTSSGELYKWLKQNDFRISKDAKASLDY
YVQHKFVFVAARIRNGSKDNAAISQRLRDGNIAPMHLVFKSPRVTYPLKV
TSLNRGDSDMEIYV
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mRNA from alignment at P-wetherbeei_contig15540:1109..1600-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15540.2.1 ID=mRNA_P-wetherbeei_contig15540.2.1|Name=mRNA_P-wetherbeei_contig15540.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=492bp|location=Sequence derived from alignment at P-wetherbeei_contig15540:1109..1600- (Phaeothamnion wetherbeei SAG_119_79)
GAATTCGCCTGGGTCATACCCGTTCAGTCCCGTCCCAAAATCACCGTCGA AAAGGGTGCCCCTTTCACGGAACTCCGCCGCCTCACGGAAATTCGCGTCC CTCAACCCGTACGCGCTTCCATGCCCGGCTCGGCACGAGGTGGGGCAGCC CCGCCCGCTGCCGTTACGGTGCTCGAGCGCAAAGAAGAGGGCCCCTATGA TCTCGCCGTTCTCGGCTCGACCTCCAGCGGCGAACTCTACAAGTGGCTTA AGCAAAACGACTTCCGCATCTCCAAGGACGCCAAGGCCTCTCTGGACTAC TACGTTCAGCACAAATTCGTATTCGTAGCCGCCCGCATTCGCAACGGTTC CAAAGACAATGCCGCCATTTCGCAGCGCCTTCGCGACGGAAACATCGCCC CCATGCACCTGGTCTTCAAGTCCCCCAGGGTTACCTATCCTCTCAAAGTG ACTTCGCTCAATCGGGGCGACTCGGACATGGAAATCTACGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15540:1109..1600-

>mRNA_P-wetherbeei_contig15540.2.1 ID=mRNA_P-wetherbeei_contig15540.2.1|Name=mRNA_P-wetherbeei_contig15540.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=492bp|location=Sequence derived from alignment at P-wetherbeei_contig15540:1109..1600- (Phaeothamnion wetherbeei SAG_119_79)
GAATTCGCCTGGGTCATACCCGTTCAGTCCCGTCCCAAAATCACCGTCGA
AAAGGGTGCCCCTTTCACGGAACTCCGCCGCCTCACGGAAATTCGCGTCC
CTCAACCCGTACGCGCTTCCATGCCCGGCTCGGCACGAGGTGGGGCAGCC
CCGCCCGCTGCCGTTACGGTGCTCGAGCGCAAAGAAGAGGGCCCCTATGA
TCTCGCCGTTCTCGGCTCGACCTCCAGCGGCGAACTCTACAAGTGGCTTA
AGCAAAACGACTTCCGCATCTCCAAGGACGCCAAGGCCTCTCTGGACTAC
TACGTTCAGCACAAATTCGTATTCGTAGCCGCCCGCATTCGCAACGGTTC
CAAAGACAATGCCGCCATTTCGCAGCGCCTTCGCGACGGAAACATCGCCC
CCATGCACCTGGTCTTCAAGTCCCCCAGGGTTACCTATCCTCTCAAAGTG
ACTTCGCTCAATCGGGGCGACTCGGACATGGAAATCTACGTG
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