mRNA_P-wetherbeei_contig15528.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15528.2.1
Unique NamemRNA_P-wetherbeei_contig15528.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15528.2.1 vs. uniprot
Match: A0A847ZXP9_9HYPH (VOC family protein n=1 Tax=Phyllobacteriaceae bacterium TaxID=1871068 RepID=A0A847ZXP9_9HYPH)

HSP 1 Score: 236 bits (603), Expect = 1.890e-78
Identity = 105/132 (79.55%), Postives = 118/132 (89.39%), Query Frame = 1
Query:    1 MTMPQRNWWHELNTWEPEIALAFYGRTLGWQFEASPLPDGAAYWIARKDGNPVGGIFELTAPDYSGVPSHWMTYMSVGDINKAENDTAKAGGEVMRPNTRVPGVGKLAVVTDSTGALIGLIEPDNAHALAAV 396
            MTMPQR+WWHELNTWEPE ALAFYGRTLGW+FE + LPDG+ YWIARKDG PVGG+FELTAPDY G+PSHWMTY+SV DI+KAE DT+ +GGEVMRP   VPGVGKLAVVTD+TGA+IGLIEPD AHAL+ V
Sbjct:    1 MTMPQRHWWHELNTWEPEAALAFYGRTLGWEFEPTSLPDGSGYWIARKDGRPVGGVFELTAPDYDGIPSHWMTYLSVDDISKAEEDTSSSGGEVMRPPVAVPGVGKLAVVTDATGAMIGLIEPDRAHALSVV 132          
BLAST of mRNA_P-wetherbeei_contig15528.2.1 vs. uniprot
Match: UPI00199BAD26 (VOC family protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=UPI00199BAD26)

HSP 1 Score: 236 bits (602), Expect = 2.870e-78
Identity = 107/132 (81.06%), Postives = 117/132 (88.64%), Query Frame = 1
Query:    1 MTMPQRNWWHELNTWEPEIALAFYGRTLGWQFEASPLPDGAAYWIARKDGNPVGGIFELTAPDYSGVPSHWMTYMSVGDINKAENDTAKAGGEVMRPNTRVPGVGKLAVVTDSTGALIGLIEPDNAHALAAV 396
            MT P ++WWHEL+TWEPE+ALAFYGRTLGWQFE +PLPDGAAYWIA KDG PVGGIFELTAPDY G+PSHWMTYMSV DI++AE DTA AGGEVMRP T VPGVGKL+VVTDSTGA+IGLIEPD  HA A V
Sbjct:    1 MTTPNKSWWHELSTWEPEVALAFYGRTLGWQFEPTPLPDGAAYWIAHKDGRPVGGIFELTAPDYDGIPSHWMTYMSVSDIDQAETDTAIAGGEVMRPATNVPGVGKLSVVTDSTGAMIGLIEPDPVHAAAPV 132          
BLAST of mRNA_P-wetherbeei_contig15528.2.1 vs. uniprot
Match: A0A537PB15_9PROT (VOC family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537PB15_9PROT)

HSP 1 Score: 207 bits (527), Expect = 6.600e-67
Identity = 92/129 (71.32%), Postives = 110/129 (85.27%), Query Frame = 1
Query:    1 MTMPQRNWWHELNTWEPEIALAFYGRTLGWQFEASPLPDGAAYWIARKDGNPVGGIFELTAPDYSGVPSHWMTYMSVGDINKAENDTAKAGGEVMRPNTRVPGVGKLAVVTDSTGALIGLIEPDNAHAL 387
            M + Q  WWHELNTWEPEIALAFYGRTLGW+F+++ LPDG +YWIARKD  PVGGIFELT+P YS +PSHWMTY++V DI++AE DT + GGEVMRP+  +PGVGKLAVV+DS GALIGLIEP++  AL
Sbjct:    1 MMLAQPAWWHELNTWEPEIALAFYGRTLGWKFDSTTLPDGGSYWIARKDNKPVGGIFELTSPHYSDIPSHWMTYLTVSDIDQAEQDTIREGGEVMRPSALIPGVGKLAVVSDSAGALIGLIEPESIAAL 129          
BLAST of mRNA_P-wetherbeei_contig15528.2.1 vs. uniprot
Match: A0A7Y2BU62_9HYPH (VOC family protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7Y2BU62_9HYPH)

HSP 1 Score: 204 bits (520), Expect = 9.990e-66
Identity = 91/130 (70.00%), Postives = 108/130 (83.08%), Query Frame = 1
Query:    1 MTMPQRNWWHELNTWEPEIALAFYGRTLGWQFEASPLPDGAAYWIARKDGNPVGGIFELTAPDYSGVPSHWMTYMSVGDINKAENDTAKAGGEVMRPNTRVPGVGKLAVVTDSTGALIGLIEPDNAHALA 390
            M  P R+WWHELNTW+PE A+ FY RTLGWQF+ + LPDG+ YWIA KDG PVGGIF LT P+Y+G+PSHWMTYM+V DI +AE  TA AGGE+ RP+T++PGVGKLAVVTD +GALIGLI+PD  HALA
Sbjct:    1 MNKPLRSWWHELNTWDPESAIEFYTRTLGWQFQDTDLPDGSQYWIATKDGAPVGGIFGLTEPEYNGIPSHWMTYMTVDDIGQAEKATAYAGGEITRPSTQIPGVGKLAVVTDVSGALIGLIQPDPTHALA 130          
BLAST of mRNA_P-wetherbeei_contig15528.2.1 vs. uniprot
Match: A0A6G6X2H9_9HYPH (VOC family protein n=1 Tax=Nordella sp. HKS 07 TaxID=2712222 RepID=A0A6G6X2H9_9HYPH)

HSP 1 Score: 198 bits (504), Expect = 2.180e-63
Identity = 88/130 (67.69%), Postives = 105/130 (80.77%), Query Frame = 1
Query:    1 MTMPQRNWWHELNTWEPEIALAFYGRTLGWQFEASPLPDGAAYWIARKDGNPVGGIFELTAPDYSGVPSHWMTYMSVGDINKAENDTAKAGGEVMRPNTRVPGVGKLAVVTDSTGALIGLIEPDNAHALA 390
            M + Q  WWHELNTWEPE ALAFYGRTLGW+F+++ LP+G  YWIARKD   VG IFELT+P Y+ +PSHWMTY++V DI+KAE DT + GGEVMRP+  +PGVGKLAVV DS GALIGLIEP+   A+A
Sbjct:    1 MMLAQPAWWHELNTWEPETALAFYGRTLGWKFDSTSLPNGGTYWIARKDNKAVGAIFELTSPQYTDIPSHWMTYLAVSDIDKAEQDTLREGGEVMRPSAHIPGVGKLAVVADSAGALIGLIEPERNVAMA 130          
BLAST of mRNA_P-wetherbeei_contig15528.2.1 vs. uniprot
Match: UPI001908EE9F (VOC family protein n=1 Tax=Aestuariivirga sp. YIM B02566 TaxID=2800327 RepID=UPI001908EE9F)

HSP 1 Score: 197 bits (501), Expect = 6.240e-63
Identity = 90/128 (70.31%), Postives = 102/128 (79.69%), Query Frame = 1
Query:    1 MTMPQRNWWHELNTWEPEIALAFYGRTLGWQFEASPLPDGAAYWIARKDGNPVGGIFELTAPDYSGVPSHWMTYMSVGDINKAENDTAKAGGEVMRPNTRVPGVGKLAVVTDSTGALIGLIEPDNAHA 384
            M + Q  WWHELNTWEPEIALAFYGRTLGW+F+ + LP+G  YWIARKD  PVG IFELT+P +S +PSHWMTY+SV DI KAE DT + GGEVMR +  VPGVGKLAVV DS GALIGLIEP+   A
Sbjct:    1 MMLAQPAWWHELNTWEPEIALAFYGRTLGWKFDETALPEGGNYWIARKDNKPVGAIFELTSPQFSDIPSHWMTYLSVSDIEKAEQDTLREGGEVMRSSAIVPGVGKLAVVADSAGALIGLIEPERTLA 128          
BLAST of mRNA_P-wetherbeei_contig15528.2.1 vs. uniprot
Match: UPI0018C606A7 (VOC family protein n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=UPI0018C606A7)

HSP 1 Score: 181 bits (460), Expect = 1.100e-56
Identity = 81/122 (66.39%), Postives = 98/122 (80.33%), Query Frame = 1
Query:    1 MTMPQRNWWHELNTWEPEIALAFYGRTLGWQFEASPLPDGAAYWIARKDGNPVGGIFELTAPDYSGVPSHWMTYMSVGDINKAENDTAKAGGEVMRPNTRVPGVGKLAVVTDSTGALIGLIE 366
            MTM Q + WHELNTWEPE AL+FY  TLGW+F+ + L DG  +W+A KDG  VG I+ELTAPD+ G+PSHWMTY++V D+ +AE D  KAGGEV+RP   +PGVGKL+VVTDSTGALIGLIE
Sbjct:    1 MTMMQHDAWHELNTWEPEAALSFYRSTLGWEFQQTELNDGGGFWLATKDGKTVGAIYELTAPDHDGIPSHWMTYLNVPDMEQAEADAVKAGGEVLRPMMEIPGVGKLSVVTDSTGALIGLIE 122          
BLAST of mRNA_P-wetherbeei_contig15528.2.1 vs. uniprot
Match: A0A2W2AIG2_9HYPH (VOC family protein n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=A0A2W2AIG2_9HYPH)

HSP 1 Score: 172 bits (437), Expect = 4.090e-53
Identity = 74/125 (59.20%), Postives = 94/125 (75.20%), Query Frame = 1
Query:   10 PQRNWWHELNTWEPEIALAFYGRTLGWQFEASPLPDGAAYWIARKDGNPVGGIFELTAPDYSGVPSHWMTYMSVGDINKAENDTAKAGGEVMRPNTRVPGVGKLAVVTDSTGALIGLIEPDNAHA 384
            P + WWHELNTWEPE A  FY  TLGW F+ + LPDG  YW+A KDG  VGGIF+LT PD+ G+P+HWMTY++V DI  A+    +AGGE++RP  R+PGVG+L+VV D +GA+IGLIEP+   A
Sbjct:    5 PLKVWWHELNTWEPEQARHFYSVTLGWDFQPTTLPDGTRYWVAHKDGRAVGGIFQLTEPDFEGIPAHWMTYLAVDDIAAAQRRAEQAGGEILRPAFRLPGVGRLSVVNDPSGAVIGLIEPEGVPA 129          
BLAST of mRNA_P-wetherbeei_contig15528.2.1 vs. uniprot
Match: A0A849E6U1_9HYPH (VOC family protein n=1 Tax=Anderseniella sp. TaxID=1872568 RepID=A0A849E6U1_9HYPH)

HSP 1 Score: 166 bits (420), Expect = 4.060e-50
Identity = 72/127 (56.69%), Postives = 92/127 (72.44%), Query Frame = 1
Query:    1 MTMPQRNWWHELNTWEPEIALAFYGRTLGWQFEASPLPDGAAYWIARKDGNPVGGIFELTAPDYSGVPSHWMTYMSVGDINKAENDTAKAGGEVMRPNTRVPGVGKLAVVTDSTGALIGLIEPDNAH 381
            M      WWHELNTW+   A  FY RTLGW FE   LPDG  YW+ARK G  VGG++ L+AP + G+P+HWMTYM+V ++ +A  +TA AGGEV RP T +PG+GK+A+VTD++GAL+GLIEP  A 
Sbjct:    1 MQQQVETWWHELNTWDALEARNFYRRTLGWTFEQVTLPDGEPYWLARKGGQTVGGVYSLSAPAFKGIPAHWMTYMAVDNLERAALETASAGGEVTRPATEIPGIGKIAIVTDASGALLGLIEPAMAQ 127          
BLAST of mRNA_P-wetherbeei_contig15528.2.1 vs. uniprot
Match: A0A7V2WMI0_9HYPH (VOC family protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7V2WMI0_9HYPH)

HSP 1 Score: 145 bits (367), Expect = 1.710e-42
Identity = 69/123 (56.10%), Postives = 88/123 (71.54%), Query Frame = 1
Query:   25 WHELNTWEPEIALAFYGRTLGWQFEASPLPDGAAYWIARKDGNPVGGIFEL--TAPDYSG------VPSHWMTYMSVGDINKAENDTAKAGGEVMRPNTRVPGVGKLAVVTDSTGALIGLIEP 369
            W ELNT++PE A+AFY  TLGW+FE + LP+G AYW+AR +   +GG+F+L  T PD         + +HWMTYM V DINK ++   K+GGEV+RP   + GVGKLAV+TDS GALIGLIEP
Sbjct:    8 WLELNTYQPEDAMAFYSETLGWEFEPTDLPEGGAYWVARHNNKTIGGVFDLSETVPDDENDTIGQTIEAHWMTYMQVTDINKVQDIAGKSGGEVIRPALFLDGVGKLAVITDSAGALIGLIEP 130          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15528.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A847ZXP9_9HYPH1.890e-7879.55VOC family protein n=1 Tax=Phyllobacteriaceae bact... [more]
UPI00199BAD262.870e-7881.06VOC family protein n=1 Tax=Hyphomicrobiales bacter... [more]
A0A537PB15_9PROT6.600e-6771.32VOC family protein n=1 Tax=Alphaproteobacteria bac... [more]
A0A7Y2BU62_9HYPH9.990e-6670.00VOC family protein n=1 Tax=Hyphomicrobiales bacter... [more]
A0A6G6X2H9_9HYPH2.180e-6367.69VOC family protein n=1 Tax=Nordella sp. HKS 07 Tax... [more]
UPI001908EE9F6.240e-6370.31VOC family protein n=1 Tax=Aestuariivirga sp. YIM ... [more]
UPI0018C606A71.100e-5666.39VOC family protein n=1 Tax=Aestuariivirga litorali... [more]
A0A2W2AIG2_9HYPH4.090e-5359.20VOC family protein n=1 Tax=Aestuariivirga litorali... [more]
A0A849E6U1_9HYPH4.060e-5056.69VOC family protein n=1 Tax=Anderseniella sp. TaxID... [more]
A0A7V2WMI0_9HYPH1.710e-4256.10VOC family protein n=1 Tax=Hyphomicrobiales bacter... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15528contigP-wetherbeei_contig15528:1196..1600 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1279038.KB907338_gene973
Model size405
Max annot lvl204441|Rhodospirillales
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.88e-35
EggNOG OGsCOG3324@1|root,COG3324@2|Bacteria,1N9ZV@1224|Proteobacteria,2UCS3@28211|Alphaproteobacteria,2JYHM@204441|Rhodospirillales
Descriptionglyoxalase bleomycin resistance protein dioxygenase
Cds size405
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186058.9822962-CDS-P-wetherbeei_contig15528:1195..16001683186058.9822962-CDS-P-wetherbeei_contig15528:1195..1600Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15528 1196..1600 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15528.2.1prot_P-wetherbeei_contig15528.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15528 1196..1600 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15528.2.1

>prot_P-wetherbeei_contig15528.2.1 ID=prot_P-wetherbeei_contig15528.2.1|Name=mRNA_P-wetherbeei_contig15528.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=135bp
MTMPQRNWWHELNTWEPEIALAFYGRTLGWQFEASPLPDGAAYWIARKDG
NPVGGIFELTAPDYSGVPSHWMTYMSVGDINKAENDTAKAGGEVMRPNTR
VPGVGKLAVVTDSTGALIGLIEPDNAHALAAVTH*
back to top

mRNA from alignment at P-wetherbeei_contig15528:1196..1600+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15528.2.1 ID=mRNA_P-wetherbeei_contig15528.2.1|Name=mRNA_P-wetherbeei_contig15528.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=405bp|location=Sequence derived from alignment at P-wetherbeei_contig15528:1196..1600+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACCATGCCGCAACGAAACTGGTGGCACGAACTCAACACCTGGGAACC GGAAATTGCGCTCGCCTTCTATGGCCGCACCTTGGGTTGGCAATTTGAAG CATCCCCGCTTCCCGATGGTGCAGCCTATTGGATTGCACGCAAGGATGGA AATCCCGTTGGCGGCATCTTTGAATTGACTGCGCCGGACTATTCGGGTGT CCCCTCGCACTGGATGACCTACATGTCGGTGGGCGATATCAACAAGGCCG AGAACGACACAGCCAAGGCTGGCGGTGAAGTGATGCGGCCCAATACGCGC GTGCCAGGTGTGGGAAAGCTTGCGGTGGTGACCGATTCAACCGGTGCCCT GATTGGCCTGATCGAGCCGGACAACGCTCACGCCTTGGCCGCAGTTACGC ACTAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig15528:1196..1600+

>mRNA_P-wetherbeei_contig15528.2.1 ID=mRNA_P-wetherbeei_contig15528.2.1|Name=mRNA_P-wetherbeei_contig15528.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=405bp|location=Sequence derived from alignment at P-wetherbeei_contig15528:1196..1600+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACCATGCCGCAACGAAACTGGTGGCACGAACTCAACACCTGGGAACC
GGAAATTGCGCTCGCCTTCTATGGCCGCACCTTGGGTTGGCAATTTGAAG
CATCCCCGCTTCCCGATGGTGCAGCCTATTGGATTGCACGCAAGGATGGA
AATCCCGTTGGCGGCATCTTTGAATTGACTGCGCCGGACTATTCGGGTGT
CCCCTCGCACTGGATGACCTACATGTCGGTGGGCGATATCAACAAGGCCG
AGAACGACACAGCCAAGGCTGGCGGTGAAGTGATGCGGCCCAATACGCGC
GTGCCAGGTGTGGGAAAGCTTGCGGTGGTGACCGATTCAACCGGTGCCCT
GATTGGCCTGATCGAGCCGGACAACGCTCACGCCTTGGCCGCAGTTACGC
ACTAG
back to top