mRNA_P-wetherbeei_contig15510.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15510.1.1 vs. uniprot
Match: A0A7V4EK31_9BACT (Redox-sensing transcriptional repressor Rex n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V4EK31_9BACT) HSP 1 Score: 162 bits (411), Expect = 1.900e-47 Identity = 87/178 (48.88%), Postives = 116/178 (65.17%), Query Frame = 1
Query: 13 DKIPQPTIARLPLYFRCLAELHDNQVTVVSSDEIASRAGVKASQFRKDLSYFGEFGIQGLGYPVPHLLRRIGSIMQLDQVHKVALLGAGNLGTALAGFPGFARWGFHILWIFDANPEKIGQKINQIEVQDARNLP---MPLPADVGILAVPATAAQKAADLFVQSGVKAILNFTGATL 537
+++P PT+ R+ Y CL EL V +SS EI V A+QFRKDLSYFGEFG G+GY VP L RRI I+++D+ V L+GAGNLG+AL G+P +R F I +FD NP KIG+++ E++D LP + A +GI+AVPA+AAQ ADL V +G+ AILNF +L
Sbjct: 6 NRVPVPTLERMATYLACLQELDARGVETISSAEIEKLTHVNAAQFRKDLSYFGEFGRPGIGYSVPELARRISKILKVDREQPVILVGAGNLGSALVGYPSLSREHFRIAAVFDNNPSKIGRRLWDHEIRDISTLPEVNREVGARLGIIAVPASAAQSVADLMVGAGITAILNFAPVSL 183
BLAST of mRNA_P-wetherbeei_contig15510.1.1 vs. uniprot
Match: A0A3A4QQY2_9CHLR (Redox-sensing transcriptional repressor Rex n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A3A4QQY2_9CHLR) HSP 1 Score: 162 bits (410), Expect = 2.380e-47 Identity = 84/179 (46.93%), Postives = 117/179 (65.36%), Query Frame = 1
Query: 13 DKIPQPTIARLPLYFRCLAELHDNQVTVVSSDEIASRAGVKASQFRKDLSYFGEFGIQGLGYPVPHLLRRIGSIMQLDQVHKVALLGAGNLGTALAGFPGFARWGFHILWIFDANPEKIGQKINQIEVQDARNLPMPLPA---DVGILAVPATAAQKAADLFVQSGVKAILNFTGATLS 540
+KIP I RLP+Y R L + D+ + SS E+ G+ A+Q RKD+S FGEFG QG GY + +LL ++ I+++D++ VAL+GAG++G ALA + GF GFHI+ IFD P+KIGQKI VQDA + + A + +L VPATAAQ AD VQ+GV+AILN+ +L+
Sbjct: 4 EKIPDIIIGRLPVYLRALQRMADHGIKTTSSQELGEHVGISAAQIRKDISQFGEFGKQGTGYSIAYLLDKLREILKVDRIWDVALIGAGDMGHALANYQGFTNRGFHIVAIFDNQPQKIGQKIGDFVVQDAEKIVESIKAANIKIAMLTVPATAAQSVADKLVQAGVRAILNYAPISLN 182
BLAST of mRNA_P-wetherbeei_contig15510.1.1 vs. uniprot
Match: A0A3M2BQ50_9BACT (Redox-sensing transcriptional repressor Rex n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3M2BQ50_9BACT) HSP 1 Score: 159 bits (403), Expect = 2.890e-46 Identity = 84/182 (46.15%), Postives = 121/182 (66.48%), Query Frame = 1
Query: 1 MDKRDKIPQPTIARLPLYFRCLAELHDNQVTVVSSDEIASRAGVKASQFRKDLSYFGEFGIQGLGYPVPHLLRRIGSIMQLDQVHKVALLGAGNLGTALAGFPGFARWGFHILWIFDANPEKIGQKINQIEVQDARNLPMPLP---ADVGILAVPATAAQKAADLFVQSGVKAILNFTGATL 537
M +RD + T+ RL +Y RCL +L + T +SS ++A R + A+Q RKDL+ FGEFGI+G+GY + L RR+ S++ +D+ H+VA++GAGNLGTALA FPGF F ++ + D +P+K+G+KI V +R LP +P +GILAVPA AAQ+ D ++GVKA+LNF L
Sbjct: 1 MSQRDDVSSLTLNRLSVYLRCLRQLQQDGETRISSQDLARRFHLSAAQIRKDLAQFGEFGIRGVGYQIDDLRRRLESLLGVDREHRVAIVGAGNLGTALARFPGFNSDSFRVVAVLDNDPQKVGRKIAGHTVCHSRELPRLIPELGVQIGILAVPAAAAQENYDALARAGVKAVLNFAPVQL 182
BLAST of mRNA_P-wetherbeei_contig15510.1.1 vs. uniprot
Match: A0A4Q5NNI3_9BACT (Redox-sensing transcriptional repressor Rex n=2 Tax=bacterium TaxID=1869227 RepID=A0A4Q5NNI3_9BACT) HSP 1 Score: 160 bits (404), Expect = 3.080e-46 Identity = 88/181 (48.62%), Postives = 114/181 (62.98%), Query Frame = 1
Query: 4 DKRDKIPQPTIARLPLYFRCLAELHDNQVTVVSSDEIASRAGVKASQFRKDLSYFGEFGIQGLGYPVPHLLRRIGSIMQLDQVHKVALLGAGNLGTALAGFPGFARWGFHILWIFDANPEKIGQKINQIEV---QDARNLPMPLPADVGILAVPATAAQKAADLFVQSGVKAILNFTGATL 537
D K+PQPTI RL Y +C+ L D + SS EIA R G+ A+Q RKDLSYFGEFG GLGY + L ++ IM LD+ V L+GAGNLG AL+ + GF R GF I+ FD + EK+G + I + Q+ L A VG++AVP++AAQ+A D V +GVKAILNF AT+
Sbjct: 14 DAFKKVPQPTIERLSAYLQCIRGLRDEERDTASSAEIARRTGINAAQLRKDLSYFGEFGTPGLGYDLQALETQLTRIMGLDEERDVLLIGAGNLGRALSSYTGFGRRGFRIVAAFDLDGEKVGTSLGNIPIFHLQELSRRNTELGAQVGLVAVPSSAAQEAVDALVAAGVKAILNFAPATI 194
BLAST of mRNA_P-wetherbeei_contig15510.1.1 vs. uniprot
Match: UPI0019AE8103 (Redox-sensing transcriptional repressor Rex n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=UPI0019AE8103) HSP 1 Score: 159 bits (402), Expect = 3.860e-46 Identity = 81/179 (45.25%), Postives = 119/179 (66.48%), Query Frame = 1
Query: 13 DKIPQPTIARLPLYFRCLAELHDNQVTVVSSDEIASRAGVKASQFRKDLSYFGEFGIQGLGYPVPHLLRRIGSIMQLDQVHKVALLGAGNLGTALAGFPGFARWGFHILWIFDANPEKIGQKINQIEVQDARNLPMPLPA---DVGILAVPATAAQKAADLFVQSGVKAILNFTGATLS 540
+KIP I RLP+Y R L + DN + SS E+ G+ A+Q RKD+S FGEFG QG GY + +LL ++ I+++D++ VAL+GAG++G ALA + GF GF I+ IFD++ K+GQKI++ V+DA +P L + + +L VPAT+AQ AD +Q+GVKAILN+ +L+
Sbjct: 4 EKIPDIIIGRLPVYLRALQRMADNGIKTTSSQELGEHVGISAAQIRKDISQFGEFGKQGTGYSIAYLLDKLREILKVDRIWDVALVGAGDMGHALARYQGFTNRGFRIVAIFDSDKTKVGQKIDEFVVEDAEKIPERLKSAGVKIAMLTVPATSAQSVADKLIQAGVKAILNYAPISLN 182
BLAST of mRNA_P-wetherbeei_contig15510.1.1 vs. uniprot
Match: A0A7V9I926_9CHLR (Redox-sensing transcriptional repressor Rex n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9I926_9CHLR) HSP 1 Score: 157 bits (398), Expect = 2.150e-45 Identity = 82/182 (45.05%), Postives = 117/182 (64.29%), Query Frame = 1
Query: 1 MDKRDKIPQPTIARLPLYFRCLAELHDNQVTVVSSDEIASRAGVKASQFRKDLSYFGEFGIQGLGYPVPHLLRRIGSIMQLDQVHKVALLGAGNLGTALAGFPGFARWGFHILWIFDANPEKIGQKINQIEVQDARNLP---MPLPADVGILAVPATAAQKAADLFVQSGVKAILNFTGATL 537
M+ IP I RLP+Y R L + D +VSS E+A G A+Q R+DLSYFGEFG QG GY + HLL I SI+ +++ ++V ++GAG LG A++ + GF+ GF + W++D NPE+IG +N + V+D +P + V I+AVPA AAQ+ AD+ V+SG+KAILN+ A L
Sbjct: 1 MEPGISIPDVVIKRLPIYARALTGMLDAGSEIVSSKELALATGSTAAQIRRDLSYFGEFGKQGKGYDIHHLLDEIRSILNINEPYRVVVVGAGPLGQAISRYGGFSEHGFQLSWVYDHNPERIGTMLNDVLVEDVVTMPERIRTMQVRVAIIAVPAAAAQQVADMLVESGIKAILNYAPAVL 182
BLAST of mRNA_P-wetherbeei_contig15510.1.1 vs. uniprot
Match: A0A3D3E1H6_9BACT (Redox-sensing transcriptional repressor Rex n=2 Tax=Thermotogales TaxID=2419 RepID=A0A3D3E1H6_9BACT) HSP 1 Score: 157 bits (397), Expect = 2.870e-45 Identity = 82/177 (46.33%), Postives = 118/177 (66.67%), Query Frame = 1
Query: 16 KIPQPTIARLPLYFRCLAELHDNQVTVVSSDEIASRAGVKASQFRKDLSYFGEFGIQGLGYPVPHLLRRIGSIMQLDQVHKVALLGAGNLGTALAGFPGFARWGFHILWIFDANPEKIGQKINQIEVQDARNLPMP---LPADVGILAVPATAAQKAADLFVQSGVKAILNFTGATL 537
KIP+PT+ RL LY+RCL+ ++ V VSS +IA + +K SQ RKDLSYFGEFG +GLGY V LL I I+ +++ VA++GAGNLG+AL +PG ++ F ++ +FD N +KIG+K++ I V D +L L ++G++AVP AAQ A+L +SG+K I+NF L
Sbjct: 2 KIPRPTVKRLGLYYRCLSNYREDGVDFVSSQDIAEKLNIKPSQVRKDLSYFGEFGKRGLGYDVKKLLNEIAHIIGVNKEWNVAIVGAGNLGSALTSYPGLSKHKFRVVALFDNNQQKIGKKVSGITVYDISDLERTVNELKIEIGVIAVPEFAAQHVAELLEKSGIKGIVNFAPVRL 178
BLAST of mRNA_P-wetherbeei_contig15510.1.1 vs. uniprot
Match: A0A6N7B011_9FIRM (Redox-sensing transcriptional repressor Rex n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A6N7B011_9FIRM) HSP 1 Score: 157 bits (396), Expect = 3.510e-45 Identity = 84/177 (47.46%), Postives = 115/177 (64.97%), Query Frame = 1
Query: 19 IPQPTIARLPLYFRCLAELHDNQVTVVSSDEIASRAGVKASQFRKDLSYFGEFGIQGLGYPVPHLLRRIGSIMQLDQVHKVALLGAGNLGTALAGFPGFARWGFHILWIFDANPEKIGQKINQIEVQDARNLPMPLPA---DVGILAVPATAAQKAADLFVQSGVKAILNFTGATLS 540
IP+PTI RLPLY RCL+ L + V V SSDE+ + G+ + Q RKDL+YFGEFG +G+GY V LL ++ I+ DQ HKVAL+G G+LG ALA + GF GF+I +FDA+P K+G + V + +P + ++ IL VPA AAQ+ AD V++GV+AI NF +S
Sbjct: 5 IPRPTIERLPLYLRCLSRLKSSGVEVASSDELGNLLGITSVQIRKDLAYFGEFGRRGVGYDVQSLLAQVTGILGADQPHKVALVGVGHLGQALANYDGFREHGFNISAVFDADPNKVGMTVAGQRVLHSDRIPEVVSQAGIELAILTVPAHAAQRVADALVKAGVRAIWNFAPTRIS 181
BLAST of mRNA_P-wetherbeei_contig15510.1.1 vs. uniprot
Match: A0A4P5T0F1_9BACT (Redox-sensing transcriptional repressor Rex n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A4P5T0F1_9BACT) HSP 1 Score: 156 bits (395), Expect = 5.750e-45 Identity = 83/177 (46.89%), Postives = 115/177 (64.97%), Query Frame = 1
Query: 16 KIPQPTIARLPLYFRCLAELHDNQVTVVSSDEIASRAGVKASQFRKDLSYFGEFGIQGLGYPVPHLLRRIGSIMQLDQVHKVALLGAGNLGTALAGFPGFARWGFHILWIFDANPEKIGQKINQIEVQDARNLP---MPLPADVGILAVPATAAQKAADLFVQSGVKAILNFTGATL 537
K+P PT+ RL Y R L +L + +SS E+ + G+ A+QFRKDLSYFGEFG G+GY V L RI I+++D+ ++ L+GAGNLG+AL G+PG F+++ +FD N KIG+ + +++QD L L A + ILAVPA AAQKAAD+ V++GV AILNF L
Sbjct: 8 KVPVPTLERLATYLRYLIDLEQSHTETISSAEVERQTGINAAQFRKDLSYFGEFGKPGVGYNVVDLQNRIAHILKIDREQRIILVGAGNLGSALVGYPGLKEHRFNLVAVFDNNVGKIGRPLWDLQIQDITALKEANATLEARIAILAVPAAAAQKAADILVEAGVTAILNFAPVLL 184
BLAST of mRNA_P-wetherbeei_contig15510.1.1 vs. uniprot
Match: A0A0R3JVV7_CALMK (Redox-sensing transcriptional repressor Rex n=1 Tax=Caloramator mitchellensis TaxID=908809 RepID=A0A0R3JVV7_CALMK) HSP 1 Score: 156 bits (395), Expect = 6.460e-45 Identity = 85/177 (48.02%), Postives = 112/177 (63.28%), Query Frame = 1
Query: 1 MDKRDKIPQPTIARLPLYFRCLAELHDNQVTVVSSDEIASRAGVKASQFRKDLSYFGEFGIQGLGYPVPHLLRRIGSIMQLDQVHKVALLGAGNLGTALAGFPGFARWGFHILWIFDANPEKIGQKINQIEVQDARNLPMPL---PADVGILAVPATAAQKAADLFVQSGVKAILNF 522
M K+ I I RLP Y+R L EL N + +SS E++ R G ASQ R+DL+ FG+FG QG GY V L IG I+ L++ +K ++GAGN+G A+A + F + GFH++ IFD NP+ IG I IEVQD NL L PAD+GI+ VP AQ+ AD FV+SG+K I NF
Sbjct: 1 MSKKTVISMAVIRRLPKYYRYLGELLRNDIERISSKELSERIGFTASQIRQDLNNFGDFGQQGYGYNVRALRDEIGKILGLNKEYKTVIVGAGNIGQAVANYTNFEKLGFHLIGIFDRNPKLIGMGIRDIEVQDVDNLESFLKNNPADIGIICVPKEQAQRIADAFVKSGIKGIWNF 177 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15510.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15510.1.1 >prot_P-wetherbeei_contig15510.1.1 ID=prot_P-wetherbeei_contig15510.1.1|Name=mRNA_P-wetherbeei_contig15510.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=180bp MDKRDKIPQPTIARLPLYFRCLAELHDNQVTVVSSDEIASRAGVKASQFRback to top mRNA from alignment at P-wetherbeei_contig15510:5..544- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15510.1.1 ID=mRNA_P-wetherbeei_contig15510.1.1|Name=mRNA_P-wetherbeei_contig15510.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=540bp|location=Sequence derived from alignment at P-wetherbeei_contig15510:5..544- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15510:5..544- >mRNA_P-wetherbeei_contig15510.1.1 ID=mRNA_P-wetherbeei_contig15510.1.1|Name=mRNA_P-wetherbeei_contig15510.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=540bp|location=Sequence derived from alignment at P-wetherbeei_contig15510:5..544- (Phaeothamnion wetherbeei SAG_119_79)back to top |