mRNA_P-wetherbeei_contig15466.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15466.1.1 vs. uniprot
Match: D7FLZ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLZ8_ECTSI) HSP 1 Score: 103 bits (256), Expect = 5.160e-25 Identity = 65/146 (44.52%), Postives = 78/146 (53.42%), Query Frame = 1
Query: 1 LVAFDPLTPPLEAATLAALGVGALPENEQGKRA-------------AGG----VTTLFFAPHCPMRLYSNILWANWGGEPFVSVPTAPRCLSDVLILGNSLVSYGDRLVSAADGADPTNCVLRVLPLLRETRLEPEADGERRRLKR 387
++ FDP E A LAALG G L ENE+GKR AGG TLFF PHCP RLYSN+LWANW R + +LILGN + SY DRL+ A DPTN +LR PLL++ L P +R R +R
Sbjct: 1 MLVFDPTMGEAEKAILAALGCGLL-ENEEGKRCCCRCCGERGGGDKAGGEDVATPTLFFMPHCPRRLYSNVLWANWSS----------RAMGSILILGNKISSYTDRLLDARSRVDPTNALLRAGPLLQDIDLLPYPGSDRARWRR 135
BLAST of mRNA_P-wetherbeei_contig15466.1.1 vs. uniprot
Match: A0A6H5K910_9PHAE (SRR1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K910_9PHAE) HSP 1 Score: 102 bits (254), Expect = 7.960e-23 Identity = 64/146 (43.84%), Postives = 78/146 (53.42%), Query Frame = 1
Query: 1 LVAFDPLTPPLEAATLAALGVGALPENEQGKRA-------------AGG----VTTLFFAPHCPMRLYSNILWANWGGEPFVSVPTAPRCLSDVLILGNSLVSYGDRLVSAADGADPTNCVLRVLPLLRETRLEPEADGERRRLKR 387
++ FDP E A +AALG G L ENE+GKR AGG TLFF PHCP RLYSN+LWANW R + +LILGN + SY DRL+ A DPTN +LR PLL++ L P +R R +R
Sbjct: 323 MLVFDPTMGEAEKAIMAALGCGLL-ENEEGKRCCCRCCGERGSGDKAGGEDVATPTLFFMPHCPQRLYSNVLWANW----------CSRAMGSILILGNKISSYTDRLLDARSRVDPTNALLRAGPLLQDIDLLPYPGSDRARWRR 457
BLAST of mRNA_P-wetherbeei_contig15466.1.1 vs. uniprot
Match: A0A4D9CW24_9STRA (SRR1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CW24_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 4.150e-18 Identity = 50/113 (44.25%), Postives = 68/113 (60.18%), Query Frame = 1
Query: 10 FDPLTPPLEAATLAALGVGALPENEQGKRAAGGVTTLFFAPHCPMRLYSNILWANWGGEPFVSVPTAPRCLSDVLILGNSLVSYGDRLVSAADGADPTNCVLRVLPLLRETRL 348
FDP+ +++ L LG +P NE+ KR A V TLFF P C RLYSN+LWANW +P L +V+++GNSL SY +R + + DPT+CVL +LP +RE L
Sbjct: 195 FDPVFDDVDSYLLNRLGWRVIPHNEECKRPAR-VPTLFFMPCCHRRLYSNLLWANW----------SPESLKNVVVVGNSLKSYQERAWALEEDLDPTDCVLPLLPWVREMPL 296
BLAST of mRNA_P-wetherbeei_contig15466.1.1 vs. uniprot
Match: A0A7S2WGH8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WGH8_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 3.190e-17 Identity = 51/138 (36.96%), Postives = 68/138 (49.28%), Query Frame = 1
Query: 4 VAFDPLTPPLEAATLAALGVGALPENEQGKR----------------------AAGGVTTLFFAPHCPMRLYSNILWANWGGEPFVSVPTAPRCLSDVLILGNSLVSYGDRLVSAADGADPTNCVLRVLPLLRETRLE 351
V FDP+ +E LA LG L +E+GKR AAG T+FF PHCP RLYSN+LW NWG E L ++++GNS +Y R++S + +P+NCVLR+ L E E
Sbjct: 99 VIFDPVFNEVEKRALAVLGWSVLDHDEEGKRPIAEPLVVASDDDPERSRSGCLAAG---TVFFMPHCPFRLYSNVLWRNWGPE-----------LGSMVVVGNSFAAYDQRIISRSARKNPSNCVLRLASLTMEESFE 222
BLAST of mRNA_P-wetherbeei_contig15466.1.1 vs. uniprot
Match: A0A7S2S1E9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1E9_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 6.580e-17 Identity = 51/138 (36.96%), Postives = 68/138 (49.28%), Query Frame = 1
Query: 4 VAFDPLTPPLEAATLAALGVGALPENEQGKR----------------------AAGGVTTLFFAPHCPMRLYSNILWANWGGEPFVSVPTAPRCLSDVLILGNSLVSYGDRLVSAADGADPTNCVLRVLPLLRETRLE 351
V FDP+ +E LA LG L +E+GKR AAG T+FF PHCP RLYSN+LW NWG E L ++++GNS +Y R++S + +P+NCVLR+ L E E
Sbjct: 99 VIFDPVFNEVEKRALAVLGWSVLDHDEEGKRPIAEPLVVASDDDPERSRSGCLAAG---TVFFMPHCPFRLYSNVLWRNWGPE-----------LGSMVVVGNSFAAYDQRIISRSARKNPSNCVLRLASLTMEESFE 222
BLAST of mRNA_P-wetherbeei_contig15466.1.1 vs. uniprot
Match: A0A7S2EQA1_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EQA1_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 5.470e-15 Identity = 46/121 (38.02%), Postives = 67/121 (55.37%), Query Frame = 1
Query: 10 FDPLTPPLEAATLAA-LGVGALPENEQGKRAAG--------GVTTLFFAPHCPMRLYSNILWANWGGEPFVSVPTAPRCLSDVLILGNSLVSYGDRLVSAADG--ADPTNCVLRVLPLLRE 339
++PL P+E LA V + ENE+GKR A TTLF+ PHCPMRLY+N+LW NW + + + + I GNS ++Y R+V ++ +D TN + RVLP ++E
Sbjct: 189 YEPLLLPIERIVLANHFSVQIIEENERGKRRANTLTNTYSSSTTTLFYMPHCPMRLYTNVLWTNWD---LLLQTSQTNMIHTITIFGNSFLAYDTRIVKSSKERESDDTNGLFRVLPFVKE 306
BLAST of mRNA_P-wetherbeei_contig15466.1.1 vs. uniprot
Match: A0A7S3VE53_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VE53_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 1.140e-14 Identity = 45/124 (36.29%), Postives = 65/124 (52.42%), Query Frame = 1
Query: 1 LVAFDPLTPPLEAATLAALGVGALPENEQGKRAAGG----------VTTLFFAPHCPMRLYSNILWANWGGEPFVSVPTAPRCLSDVLILGNSLVSYGDRLVSAADGADPTNCVLRVLPLLRET 342
+V F+P +E LA V L NEQGKR +TLF+ PHCPMRLYSN+LWANW + ++I+GNS ++Y DR++S+ D +N + +LP + E+
Sbjct: 232 MVYFEPFINAIERDVLAHFHVQVLDVNEQGKRRISNRESNPSTHTRPSTLFYMPHCPMRLYSNVLWANWEKNLLWN--------GRIVIMGNSFIAYDDRIISSEKRKDRSNGIFPLLPFVSES 347
BLAST of mRNA_P-wetherbeei_contig15466.1.1 vs. uniprot
Match: A0A0D2VP57_CAPO3 (SRR1-like protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VP57_CAPO3) HSP 1 Score: 77.4 bits (189), Expect = 2.360e-14 Identity = 48/113 (42.48%), Postives = 63/113 (55.75%), Query Frame = 1
Query: 10 FDPLTPPLEAATLAALGVGALPENEQGKRAAGGVTTLFFAPHCPMRLYSNILWANWGGEPFVSVPTAPRCLSDVLILGNSLVSYGDRLVSAADGADPTNCVLRVLPLLRETRL 348
FDP+ + A + LG + ENE+ KR A V TLF+ PHC RLY+N+LWANW +P L+ VLILGN L Y +R+ S A + +VLP +RET L
Sbjct: 139 FDPVFTVQDIAAVQQLGGAIISENEEAKRKAS-VPTLFYMPHCGGRLYNNLLWANW----------SPAALARVLILGNPLSRYAERM-SNASFQTALPYIAQVLPAVRETPL 239
BLAST of mRNA_P-wetherbeei_contig15466.1.1 vs. uniprot
Match: A0A7S4DID7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DID7_HETAK) HSP 1 Score: 74.3 bits (181), Expect = 4.130e-13 Identity = 41/94 (43.62%), Postives = 51/94 (54.26%), Query Frame = 1
Query: 10 FDPLTPPLEAATLAALGVGALPENEQGKRAAGGVTTLFFAPHCPMRLYSNILWANWGGEPFVSVPTAPRCLSDVLILGNSLVSYGDRLVSAADG 291
FDP+ ++ LG L NE GKR A TLFF PHCPMRLYSN+LW NWG L++ +I+GNS +Y R + AA G
Sbjct: 123 FDPILKEVDIVLAEKLGFQLLQVNEAGKRLASK-RTLFFMPHCPMRLYSNLLWTNWGSF-----------LANTIIIGNSFAAYDRRTLVAATG 204
BLAST of mRNA_P-wetherbeei_contig15466.1.1 vs. uniprot
Match: A0A7R9ZLK5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZLK5_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 4.250e-13 Identity = 41/112 (36.61%), Postives = 55/112 (49.11%), Query Frame = 1
Query: 10 FDPLTPPLEAATLAALGVGALPENEQGKRAAGGV-------TTLFFAPHCPMRLYSNILWANWGGEPFVSVPTAPRCLSDVLILGNSLVSYGDRLVSAADGADPTNCVLRVL 324
FDP P+EAA L + NE+G R+ GG T+FF PHCPM LYSN+L+ NW V+I+GNSL Y DRL++ + VL+ +
Sbjct: 17 FDPCMTPVEAAILVRNSFHIIETNERGNRSIGGNGDHDNGDQTIFFMPHCPMMLYSNVLYTNWD-----------HLQRSVIIIGNSLTDYADRLLAEDHALRSSQAVLKAI 117 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15466.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15466.1.1 >prot_P-wetherbeei_contig15466.1.1 ID=prot_P-wetherbeei_contig15466.1.1|Name=mRNA_P-wetherbeei_contig15466.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=133bp LVAFDPLTPPLEAATLAALGVGALPENEQGKRAAGGVTTLFFAPHCPMRLback to top mRNA from alignment at P-wetherbeei_contig15466:923..1468+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15466.1.1 ID=mRNA_P-wetherbeei_contig15466.1.1|Name=mRNA_P-wetherbeei_contig15466.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=546bp|location=Sequence derived from alignment at P-wetherbeei_contig15466:923..1468+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15466:923..1468+ >mRNA_P-wetherbeei_contig15466.1.1 ID=mRNA_P-wetherbeei_contig15466.1.1|Name=mRNA_P-wetherbeei_contig15466.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=399bp|location=Sequence derived from alignment at P-wetherbeei_contig15466:923..1468+ (Phaeothamnion wetherbeei SAG_119_79)back to top |