mRNA_P-wetherbeei_contig15439.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15439.1.1
Unique NamemRNA_P-wetherbeei_contig15439.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15439.1.1 vs. uniprot
Match: A0A507FF22_9FUNG (Uncharacterized protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FF22_9FUNG)

HSP 1 Score: 78.2 bits (191), Expect = 6.510e-16
Identity = 49/88 (55.68%), Postives = 58/88 (65.91%), Query Frame = 1
Query:    1 QLPVLTVYGKETIAESAAILRYVGKL--THLYPDDHLKAAQVDEVVDAMRDAIALLIPSLLEKDEQKKKAMREELAEGKLCEAYAKID 258
            QLP+LTV G   IA+S AILRYVGKL    LYPDD LKAA VD+++  ++D  A L PS  EKD  KK AMR ELA   L   +A +D
Sbjct:   53 QLPLLTVNGDNVIAQSTAILRYVGKLGSLKLYPDDPLKAALVDQLIAQVQDVEASLRPSGEEKDAVKKLAMRVELASKTLPPLFAALD 140          
BLAST of mRNA_P-wetherbeei_contig15439.1.1 vs. uniprot
Match: F2U7D3_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U7D3_SALR5)

HSP 1 Score: 78.6 bits (192), Expect = 2.590e-15
Identity = 40/74 (54.05%), Postives = 59/74 (79.73%), Query Frame = 1
Query:    1 QLPVLTVYGKETIAESAAILRYVGKLTHLYPDDHLKAAQVDEVVDAMRDAIALLIPSLLEKDEQKKKAMREELA 222
            QLP+L V G + IA+S+AI+R+VGK T+LYP+DH++AA+VDEV+  + D   L+IP++ E+D ++K AMR ELA
Sbjct:   76 QLPILQVDG-QIIAQSSAIIRFVGKKTNLYPEDHMEAARVDEVIGLIEDINWLIIPTIKERDMERKLAMRRELA 148          
BLAST of mRNA_P-wetherbeei_contig15439.1.1 vs. uniprot
Match: A0A1Y2D275_9FUNG (Thioredoxin-like protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2D275_9FUNG)

HSP 1 Score: 75.5 bits (184), Expect = 7.070e-15
Identity = 46/88 (52.27%), Postives = 57/88 (64.77%), Query Frame = 1
Query:    1 QLPVLTVYGKETIAESAAILRYVGKL--THLYPDDHLKAAQVDEVVDAMRDAIALLIPSLLEKDEQKKKAMREELAEGKLCEAYAKID 258
            Q+P+LTV G   IA+S AILRYVGK     LYPDD LKAA VD+++  ++D  A L PS  E D  KK A+R ELAE  L   +A +D
Sbjct:   53 QVPLLTVNGSTVIAQSTAILRYVGKFGPLKLYPDDALKAALVDQLISQVQDVEASLRPSGAENDPVKKLALRVELAEKGLPPLFAALD 140          
BLAST of mRNA_P-wetherbeei_contig15439.1.1 vs. uniprot
Match: A0A0L0DBM7_THETB (Ralgps2 protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DBM7_THETB)

HSP 1 Score: 76.3 bits (186), Expect = 2.730e-14
Identity = 43/85 (50.59%), Postives = 56/85 (65.88%), Query Frame = 1
Query:    4 LPVLTVYGKETIAESAAILRYVGKLTHLYPDDHLKAAQVDEVVDAMRDAIALLIPSLLEKDEQKKKAMREELAEGKLCEAYAKID 258
            +PVL + G +  A+S AILRY GKLT  YP+D + A  VDE++DA  D I LL PS+ EKDE+KK AMR  L  G L +  A ++
Sbjct:   53 MPVLEIDGTD-YAQSNAILRYAGKLTGAYPEDPVAALMVDELLDAAEDVIGLLTPSMKEKDEEKKLAMRAALMAGPLPDLLALVE 136          
BLAST of mRNA_P-wetherbeei_contig15439.1.1 vs. uniprot
Match: A0A2D5HJY4_9PROT (Uncharacterized protein n=1 Tax=SAR116 cluster bacterium TaxID=2024888 RepID=A0A2D5HJY4_9PROT)

HSP 1 Score: 72.0 bits (175), Expect = 2.120e-13
Identity = 41/86 (47.67%), Postives = 57/86 (66.28%), Query Frame = 1
Query:    1 QLPVLTVYGKETIAESAAILRYVGKLTHLYPDDHLKAAQVDEVVDAMRDAIALLIPSLLEKDEQKKKAMREELAEGKLCEAYAKID 258
            Q+PVL + GK TIA++ AI R  GKL  LYP+D +KA QVD+++DA  D   L+ PS+ E D  K+K MR EL++  L   +A +D
Sbjct:   58 QMPVLIINGK-TIAQTGAIARVCGKLGGLYPEDIIKAGQVDQIIDAATDINVLIRPSMRETDPVKRKEMRIELSKHDLPRYFAFLD 142          
BLAST of mRNA_P-wetherbeei_contig15439.1.1 vs. uniprot
Match: A0A382YTN9_9ZZZZ (GST N-terminal domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382YTN9_9ZZZZ)

HSP 1 Score: 69.3 bits (168), Expect = 4.380e-13
Identity = 36/73 (49.32%), Postives = 53/73 (72.60%), Query Frame = 1
Query:    1 QLPVLTVYGKETIAESAAILRYVGKLTHLYPDDHLKAAQVDEVVDAMRDAIALLIPSLLEKDEQKKKAMREEL 219
            QLPVL + GK  I ++  I R+ GKL++LYP+D++ AAQVD+++D   D   L+ P++ EKDE+ KK MRE+L
Sbjct:   58 QLPVLEIDGK-IIGQTGGIARFCGKLSNLYPEDNILAAQVDQIIDTATDITNLISPTVGEKDEKIKKNMREKL 129          
BLAST of mRNA_P-wetherbeei_contig15439.1.1 vs. uniprot
Match: A0A2N2JHB1_9DELT (Glutathione S-transferase n=1 Tax=Deltaproteobacteria bacterium HGW-Deltaproteobacteria-14 TaxID=2013741 RepID=A0A2N2JHB1_9DELT)

HSP 1 Score: 70.5 bits (171), Expect = 5.740e-13
Identity = 41/84 (48.81%), Postives = 56/84 (66.67%), Query Frame = 1
Query:    4 LPVLTVYGKETIAESAAILRYVGKLTHLYPDDHLKAAQVDEVVDAMRDAIALLIPSLLEKDEQKKKAMREELAEGKLCEAYAKI 255
            +PVLTV G+  +++S +ILR+VGKL+ LYP D L+A   DE++DA  DA  LL P+ + KD  + KA RE LA GKL    A +
Sbjct:   52 MPVLTVDGR-AVSQSNSILRFVGKLSDLYPSDPLQALLCDEIMDAAEDANGLLAPTHVIKDPVELKAAREALAAGKLAAYVASL 134          
BLAST of mRNA_P-wetherbeei_contig15439.1.1 vs. uniprot
Match: A0A2D4CII2_PYTIN (Glutathione S-transferase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CII2_PYTIN)

HSP 1 Score: 71.2 bits (173), Expect = 7.260e-13
Identity = 42/87 (48.28%), Postives = 62/87 (71.26%), Query Frame = 1
Query:    1 QLPVLTVYGKETIAESAAILRYVGKLTHLYPDDHLKAAQ-VDEVVDAMRDAIALLIPSLLEKDEQKKKAMREELAEGKLCEAYAKID 258
            ++PVL V G E IAES A+LR+VG++  LYP ++ + A  +DEV+ A  D I++L+PS+ E+D QKKK MREEL +G+L     ++D
Sbjct:   52 KVPVLEVDG-EVIAESQAMLRFVGRIGGLYPVNNPELALLIDEVLGAYDDMISMLVPSIKERDPQKKKIMREELIDGRLQHHLEQMD 137          
BLAST of mRNA_P-wetherbeei_contig15439.1.1 vs. uniprot
Match: A0A524NL81_9DELT (Glutathione S-transferase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A524NL81_9DELT)

HSP 1 Score: 70.1 bits (170), Expect = 7.670e-13
Identity = 39/77 (50.65%), Postives = 56/77 (72.73%), Query Frame = 1
Query:    4 LPVLTVYGKETIAESAAILRYVGKLTHLYPDDHLKAAQVDEVVDAMRDAIALLIPSLLEKDEQKKKAMREELAEGKL 234
            +PVL V G E I +S AI+R+VGKL +LYPD+ L+AA+ DEV+DA+ D ++ ++ +   +DE  K+A RE LAEG L
Sbjct:   52 VPVLEVDG-EAITQSNAIIRFVGKLANLYPDNPLQAARCDEVMDAVEDIVSRVVATFGIEDEAAKRAAREALAEGPL 127          
BLAST of mRNA_P-wetherbeei_contig15439.1.1 vs. uniprot
Match: D7FPV3_ECTSI (Glutathione S-transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV3_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 1.180e-12
Identity = 39/75 (52.00%), Postives = 52/75 (69.33%), Query Frame = 1
Query:    1 QLPVLTVYGKETIAESAAILRYVGKLTHLYPDDHLKAAQVDEVVDAMRDAIALLIPSLLEKDEQKKKAMREELAE 225
            QLP+LTV   E   +SAAILRY GK+  LYP D + AA+VD V+D M D  A + PS+ E + Q+K +MR+EL+E
Sbjct:   50 QLPILTV-DDEVFPQSAAILRYAGKIGGLYPSDPIAAAKVDAVIDCMFDIQAAIRPSIYETNAQRKLSMRKELSE 123          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15439.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A507FF22_9FUNG6.510e-1655.68Uncharacterized protein n=1 Tax=Chytriomyces confe... [more]
F2U7D3_SALR52.590e-1554.05Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
A0A1Y2D275_9FUNG7.070e-1552.27Thioredoxin-like protein n=1 Tax=Rhizoclosmatium g... [more]
A0A0L0DBM7_THETB2.730e-1450.59Ralgps2 protein n=1 Tax=Thecamonas trahens ATCC 50... [more]
A0A2D5HJY4_9PROT2.120e-1347.67Uncharacterized protein n=1 Tax=SAR116 cluster bac... [more]
A0A382YTN9_9ZZZZ4.380e-1349.32GST N-terminal domain-containing protein (Fragment... [more]
A0A2N2JHB1_9DELT5.740e-1348.81Glutathione S-transferase n=1 Tax=Deltaproteobacte... [more]
A0A2D4CII2_PYTIN7.260e-1348.28Glutathione S-transferase, putative n=1 Tax=Pythiu... [more]
A0A524NL81_9DELT7.670e-1350.65Glutathione S-transferase n=1 Tax=Myxococcales bac... [more]
D7FPV3_ECTSI1.180e-1252.00Glutathione S-transferase n=2 Tax=Ectocarpus TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15439contigP-wetherbeei_contig15439:776..1568 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog946362.XP_004994854.1
PFAMsGST_C_3,GST_N
Model size258
Max annot lvl33154|Opisthokonta
KEGG rclassRC00004,RC00069,RC00672,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944
KEGG koko:K04097
KEGG ReactionR02266,R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409
KEGG Pathwayko00480,ko00590,ko00980,ko00982,ko01100,ko05204,map00480,map00590,map00980,map00982,map01100,map05204
Hectar predicted targeting categoryother localisation
Exons3
Evalue4.25e-16
EggNOG OGsKOG1695@1|root,KOG1695@2759|Eukaryota,3A52M@33154|Opisthokonta
EC2.5.1.18,5.3.99.2
DescriptionGlutathione S-transferase, C-terminal domain
Cds size258
COG categoryO
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186056.1471376-CDS-P-wetherbeei_contig15439:775..8441683186056.1471376-CDS-P-wetherbeei_contig15439:775..844Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15439 776..844 -
1683186056.1587691-CDS-P-wetherbeei_contig15439:1101..11731683186056.1587691-CDS-P-wetherbeei_contig15439:1101..1173Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15439 1102..1173 -
1683186056.1738825-CDS-P-wetherbeei_contig15439:1451..15681683186056.1738825-CDS-P-wetherbeei_contig15439:1451..1568Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15439 1452..1568 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15439.1.1prot_P-wetherbeei_contig15439.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15439 776..1568 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15439.1.1

>prot_P-wetherbeei_contig15439.1.1 ID=prot_P-wetherbeei_contig15439.1.1|Name=mRNA_P-wetherbeei_contig15439.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=86bp
QLPVLTVYGKETIAESAAILRYVGKLTHLYPDDHLKAAQVDEVVDAMRDA
IALLIPSLLEKDEQKKKAMREELAEGKLCEAYAKID
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mRNA from alignment at P-wetherbeei_contig15439:776..1568-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15439.1.1 ID=mRNA_P-wetherbeei_contig15439.1.1|Name=mRNA_P-wetherbeei_contig15439.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=793bp|location=Sequence derived from alignment at P-wetherbeei_contig15439:776..1568- (Phaeothamnion wetherbeei SAG_119_79)
CAGCTTCCGGTGCTGACTGTGTACGGGAAAGAGACCATCGCCGAGTCTGC CGCCATCCTACGCTACGTCGGCAAGCTCACGCATCTCTATCCGGACGACC ACCTTAAGGCCGCCCAGGTTAGCTTTGCTTACGTGTTGCTTCCGTTCTTC CGGCTTCGCGTGACCAGCACGCCTGAAGCGATGGTGGCAGGTGGCGGCGG TCGCGTCGCCGGGGACCGGGCGACTTTGGCGACGGATGTCGTTCTGGAAA CGGTTTGATGAAGCTGTTTTAAAGCATTCGCTGGCATCCTCCGGGCTCTT CTGATGTCGACAGCAATGTCCATTTCTCTTTTTGAATCACACACGTGCCC TTTTTTTCACGTGCCTCTCTTGCTTCCGTCGCCTCTTATCGGCAGGTGGA CGAGGTGGTGGATGCGATGCGGGACGCCATCGCGCTGCTCATCCCGAGTC TTCTCGAGAAGGACGAGGTGCGGCTCCGCTTCTTTCTCTTTAAGGATTGA ATTGCGAGCAGCTTTACCGCATGCCGACGGCCGGACAGCATGGCTTCCAT ATGAAGGCTTAAATTCGATCAGGATGTCCTGTGATCGCCACCGCCATGTT AAGGGCCGCCGCGACCGCCGCCACCAGCGCTTCCACATAACCGCCGCCAC AGCTGCCACCACAACCGCCACCGCCATCCGTCGCCGCAATCGCCGCCGCG ATTGCTGCCGTCTGCATCCCGCAGCAAAAGAAGAAGGCGATGCGTGAGGA GCTCGCAGAAGGAAAGCTGTGCGAGGCATACGCCAAGATCGAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15439:776..1568-

>mRNA_P-wetherbeei_contig15439.1.1 ID=mRNA_P-wetherbeei_contig15439.1.1|Name=mRNA_P-wetherbeei_contig15439.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=258bp|location=Sequence derived from alignment at P-wetherbeei_contig15439:776..1568- (Phaeothamnion wetherbeei SAG_119_79)
CAGCTTCCGGTGCTGACTGTGTACGGGAAAGAGACCATCGCCGAGTCTGC
CGCCATCCTACGCTACGTCGGCAAGCTCACGCATCTCTATCCGGACGACC
ACCTTAAGGCCGCCCAGGTGGACGAGGTGGTGGATGCGATGCGGGACGCC
ATCGCGCTGCTCATCCCGAGTCTTCTCGAGAAGGACGAGCAAAAGAAGAA
GGCGATGCGTGAGGAGCTCGCAGAAGGAAAGCTGTGCGAGGCATACGCCA
AGATCGAC
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