mRNA_P-wetherbeei_contig15428.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15428.1.1
Unique NamemRNA_P-wetherbeei_contig15428.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15428.1.1 vs. uniprot
Match: D7FKR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKR3_ECTSI)

HSP 1 Score: 235 bits (599), Expect = 4.010e-71
Identity = 126/239 (52.72%), Postives = 154/239 (64.44%), Query Frame = 1
Query:   34 GMGAHALWGYTPALDLLSDLGERVPQSQSGRSSAEGGEINILVVQPGDIGHILRTLACKRRHLHTTVNLYVWDRPLEALARHLLLLQVAHDSELPTRHRANAFLEIYGNTKVQERTSRYIARLAEELIEFVCSDXXXXXXXXXXXXXXXLSALVDLSLLKFKERDALEAAFKSWGHSVPYDGEFFLDGVDKLRDQRLRHFFKERYDVRRNLVDWDYTGRLKPVAGVVHLKQYRAWRLDG 750
            G+G HA+WG TPA DLL D             S   G+ NIL+ QPGDIGH+LRT+  +R H   T++LY+W+R +E LARHLLLLQVA D ELP R RAN FLEI+GN  VQ+RTSRYIARL +EL+  + S                +  ++DLSLLK +ERD LE  FKSW   VP +       V  LRD RLR+FF  RYD R+NLVDWDYT RLK VA ++H  QYR+WRL+G
Sbjct:    7 GIGPHAMWGCTPAQDLLRD-------------SPLKGQANILICQPGDIGHVLRTIGTRRGHPQHTIHLYIWERQIEVLARHLLLLQVAQDWELPIRQRANVFLEIFGNCLVQDRTSRYIARLGKELVGMLFSTED-------------VPDILDLSLLKNRERDQLEEVFKSWRCDVPCN-------VTALRDARLRNFFGVRYDHRKNLVDWDYTNRLKQVASIIHHTQYRSWRLEG 212          
BLAST of mRNA_P-wetherbeei_contig15428.1.1 vs. uniprot
Match: A0A7S2W9D7_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W9D7_9STRA)

HSP 1 Score: 211 bits (536), Expect = 4.620e-62
Identity = 114/240 (47.50%), Postives = 147/240 (61.25%), Query Frame = 1
Query:   34 GMGAHALWGYTPALDLLSDLGERVPQSQSGRSSAEGGEINILVVQPGDIGHILRTLA-CKRRHLHTTVNLYVWDRPLEALARHLLLLQVAHDSELPTRHRANAFLEIYGNTKVQERTSRYIARLAEELIEFVCSDXXXXXXXXXXXXXXXLSALVDLSLLKFKERDALEAAFKSWGHSVPYDGEFFLDGVDKLRDQRLRHFFKERYDVRRNLVDWDYTGRLKPVAGVVHLKQYRAWRLDG 750
            G+G H  WG +PA+DLL    E     Q G     G E+ ILV+  GDIGH ++T A C+R + +T V +Y++D P+E LARHL LL +  D ++P R RAN FLE++GN  VQERTS+YI  L E+L++FVC+D               L  LVDLSLLK ++ DALE  FKSWG +V +D       +  LRD RLR   KERYD R  LVDWDY   +KP A ++H +QYR WR  G
Sbjct:    3 GLGVHKYWGMSPAVDLLQAYRELC---QGGDVQGGGEELKILVLGAGDIGHAIKTAAACRRENKNTKVKIYMYDSPVECLARHLGLLAILTDWQVPVRLRANTFLEVFGNCLVQERTSKYIGELGEKLVKFVCNDEGT------------LRRLVDLSLLKHRDADALEKIFKSWGDNVAFD-------MKTLRDDRLRALHKERYDNRVGLVDWDYQSGVKPTASIIHSQQYRKWRDTG 220          
BLAST of mRNA_P-wetherbeei_contig15428.1.1 vs. uniprot
Match: A0A6A5AKG1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AKG1_9STRA)

HSP 1 Score: 197 bits (500), Expect = 8.700e-59
Identity = 100/241 (41.49%), Postives = 150/241 (62.24%), Query Frame = 1
Query:   37 MGAHALWGYTPALDLLSDLGE-RVPQSQSGRSSAEGGEINILVVQPGDIGHILRTLACKRRHLHTTVNLYVWDRPLEALARHLLLLQVAHDSELPTRHRANAFLEIYGNTKVQERTSRYIARLAEELIEFVCSDXXXXXXXXXXXXXXXLSALVDLSLLKFKERDALEAAFKSWGHSVPYDGEFFLDGVDKLRDQRLRHFFKERYDVRRNLVDWDYTGRLKPV--AGVVHLKQYRAWRLDG 750
            +G H +WG++P  DL   + E R   +Q   S++    + +LV+ PGDI H+L T+A  RR     +++Y++++  E LAR LLLLQ+ +D E+P R R N FLE++GN  VQ RT+ YI   A++L+E VC++               L+ ++DLS LK K RDAL   F+SW  +VP++       +++LRDQRLRH+++ RYD R NLVDWDYT  L+ +  A V+H+KQ++ WR  G
Sbjct:   13 LGTHGMWGFSPGFDLQEGVSEPRADSNQVDASTSSSEPLCVLVLSPGDIRHVLATIARSRRWKKRPLHIYLYEKSPECLARALLLLQIVNDWEVPLRQRCNTFLEVFGNALVQGRTAEYIEEKAKQLVELVCNESGR------------LTDVIDLSHLKMKSRDALVETFQSWHTNVPFN-------LERLRDQRLRHYYENRYDYRNNLVDWDYTMSLRKIQDASVIHIKQFKEWRNTG 234          
BLAST of mRNA_P-wetherbeei_contig15428.1.1 vs. uniprot
Match: A0A485KSI8_9STRA (Aste57867_11297 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KSI8_9STRA)

HSP 1 Score: 199 bits (507), Expect = 2.220e-57
Identity = 103/240 (42.92%), Postives = 150/240 (62.50%), Query Frame = 1
Query:   37 MGAHALWGYTPALDLLSDLGERVPQSQSGRSSAEGGEINILVVQPGDIGHILRTLACKRRHLHTTVNLYVWDRPLEALARHLLLLQVAHDSELPTRHRANAFLEIYGNTKVQERTSRYIARLAEELIEFVCSDXXXXXXXXXXXXXXXLSALVDLSLLKFKERDALEAAFKSWGHSVPYDGEFFLDGVDKLRDQRLRHFFKERYDVRRNLVDWDYTGRLKPV--AGVVHLKQYRAWRLDG 750
            +G   +WG++PA DL  D+      +Q+   +AE   + +LV+ PGDI H+L T+A  RR     +++Y++++  E+LAR LLLLQ+ HD E+P R R N FLE++GN  VQERT  YI   A +L+E VC++               L+ LVDL+ LK K+RDAL   F+SW   VP++       +++LRDQRLRHF++ RYD R NL+DWDYT  +K +  A V+H++Q+R WR  G
Sbjct:   11 LGTLGMWGFSPAFDLQEDVSPPADANQALPDAAE--PLRVLVLSPGDIRHVLTTIARSRRWKKRPLHIYLYEKAPESLARSLLLLQIVHDWEIPLRQRCNTFLEVFGNALVQERTCDYIQDKANQLVELVCNERGR------------LADLVDLTHLKMKDRDALVDVFQSWHVHVPFN-------IERLRDQRLRHFYENRYDYRNNLLDWDYTMAIKKIQDASVIHIRQFRTWRNSG 229          
BLAST of mRNA_P-wetherbeei_contig15428.1.1 vs. uniprot
Match: A0A7S2BEA7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BEA7_9STRA)

HSP 1 Score: 197 bits (501), Expect = 1.150e-56
Identity = 112/243 (46.09%), Postives = 150/243 (61.73%), Query Frame = 1
Query:   28 ESGMGAHALWGYTPALDLLSDLGERVPQSQSGRSSAEGGEINILVVQPGDIGHILRTLACKRRHLHT-TVNLYVWDRPLEALARHLLLLQVAHDSELPTRHRANAFLEIYGNTKVQERTSRYIARLAEELIEFVCSDXXXXXXXXXXXXXXXLSALVDLSLLKFKERDALEAAFKSWGHSVPYDGEFFLDGVDKLRDQRLRHFFKERYDVRRNLVDWDYTGRLKPV-AGVVHLKQYRAWRLDG 750
            ESGMG H+LWG +PA+DLL    + VP + +    A G  I+ILV QPGDI H+L +++ +RR      ++ Y+ ++P+E LARHLLLLQ+A D ELP R RAN FLE +GN+ +QERT  Y+A L  EL+E  C+                L  +VDLSL+K+++RD+L   F SW  S P+D       V+ LRD RLR  + +RYD R NL DWDY  R+KP  A V+H K Y+ WR  G
Sbjct:    4 ESGMGIHSLWGLSPAMDLL----QLVPSAVADDLDA-GATISILVAQPGDIRHLLCSISRRRRRPGVGALHFYLIEQPVEVLARHLLLLQIATDWELPIRQRANLFLEAFGNSLLQERTEAYVAALGRELVELACNGQGA------------LEEIVDLSLIKYRDRDSLVDTFHSWAPSNPFD-------VEDLRDHRLRAHYGQRYDHRTNLGDWDYQMRIKPTGATVIHPKLYKGWRNTG 222          
BLAST of mRNA_P-wetherbeei_contig15428.1.1 vs. uniprot
Match: A0A6G0XPS5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPS5_9STRA)

HSP 1 Score: 197 bits (500), Expect = 2.380e-56
Identity = 105/241 (43.57%), Postives = 149/241 (61.83%), Query Frame = 1
Query:   37 MGAHALWGYTPALDLLSDLGERVPQS-QSGRSSAEGGEINILVVQPGDIGHILRTLACKRRHLHTTVNLYVWDRPLEALARHLLLLQVAHDSELPTRHRANAFLEIYGNTKVQERTSRYIARLAEELIEFVCSDXXXXXXXXXXXXXXXLSALVDLSLLKFKERDALEAAFKSWGHSVPYDGEFFLDGVDKLRDQRLRHFFKERYDVRRNLVDWDYTGRLKPV--AGVVHLKQYRAWRLDG 750
            +G   +WG++PA DL   +      S Q+ +SS     + +LV+ PGDI H+L T+A  RR     +++YV+++  E+LAR LLLLQ+  D E+P R R N FLE++GN  VQ RTS YI   A++L+E VC++               L+ LVDL+ LK K+RDAL   F+SW  SVP++       +++LRDQRLRHF++ RYD R NL DWDYT  LK +  A V+H+KQ++ WR  G
Sbjct:   11 LGTLGMWGFSPAFDLQEGVSSPADTSNQTQKSSLSEEPLCVLVLNPGDIRHVLTTIARSRRWKKRPLHIYVFEKAPESLARALLLLQIVQDWEIPLRQRCNLFLEVFGNALVQGRTSEYIEEKAKQLVELVCNERGR------------LADLVDLNHLKMKQRDALVNVFQSWSTSVPFN-------LERLRDQRLRHFYENRYDYRANLFDWDYTMTLKKIQDASVIHIKQFKQWRNSG 232          
BLAST of mRNA_P-wetherbeei_contig15428.1.1 vs. uniprot
Match: W4HAQ6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HAQ6_9STRA)

HSP 1 Score: 197 bits (500), Expect = 3.090e-56
Identity = 100/241 (41.49%), Postives = 150/241 (62.24%), Query Frame = 1
Query:   37 MGAHALWGYTPALDLLSDLGE-RVPQSQSGRSSAEGGEINILVVQPGDIGHILRTLACKRRHLHTTVNLYVWDRPLEALARHLLLLQVAHDSELPTRHRANAFLEIYGNTKVQERTSRYIARLAEELIEFVCSDXXXXXXXXXXXXXXXLSALVDLSLLKFKERDALEAAFKSWGHSVPYDGEFFLDGVDKLRDQRLRHFFKERYDVRRNLVDWDYTGRLKPV--AGVVHLKQYRAWRLDG 750
            +G H +WG++P  DL   + E R   +Q   S++    + +LV+ PGDI H+L T+A  RR     +++Y++++  E LAR LLLLQ+ +D E+P R R N FLE++GN  VQ RT+ YI   A++L+E VC++               L+ ++DLS LK K RDAL   F+SW  +VP++       +++LRDQRLRH+++ RYD R NLVDWDYT  L+ +  A V+H+KQ++ WR  G
Sbjct:   13 LGTHGMWGFSPGFDLQEGVSEPRADSNQVDASTSSSEPLCVLVLSPGDIRHVLATIARSRRWKKRPLHIYLYEKSPECLARALLLLQIVNDWEVPLRQRCNTFLEVFGNALVQGRTAEYIEEKAKQLVELVCNESGR------------LADVIDLSHLKMKSRDALVETFQSWHTNVPFN-------LERLRDQRLRHYYENRYDYRNNLVDWDYTMSLRKIQDASVIHIKQFKEWRNTG 234          
BLAST of mRNA_P-wetherbeei_contig15428.1.1 vs. uniprot
Match: A0A067CNW4_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CNW4_SAPPC)

HSP 1 Score: 196 bits (497), Expect = 4.550e-56
Identity = 103/240 (42.92%), Postives = 147/240 (61.25%), Query Frame = 1
Query:   37 MGAHALWGYTPALDLLSDLGERVPQSQSGRSSAEGGEINILVVQPGDIGHILRTLACKRRHLHTTVNLYVWDRPLEALARHLLLLQVAHDSELPTRHRANAFLEIYGNTKVQERTSRYIARLAEELIEFVCSDXXXXXXXXXXXXXXXLSALVDLSLLKFKERDALEAAFKSWGHSVPYDGEFFLDGVDKLRDQRLRHFFKERYDVRRNLVDWDYTGRLKPV--AGVVHLKQYRAWRLDG 750
            +G   +WG++PA DL   + E     Q   +  +   +++LVV PGDI H+L T++  RR     +++Y++++  E+LAR LLLLQ+ H+ ELP R R N FLE++GN  +QERTS +I   A+EL+E VC++               L+ LVD+S LK K+RDAL   F+SW  SVP+D       + KLRD RLRHF++ RYD R NL DWDYT  LK +  A V+H +Q++ WR  G
Sbjct:   11 LGTLGMWGFSPAFDLHEGVAEPATDDQG--TDDDTTPLSLLVVNPGDIRHVLTTISRSRRWQKRPLHIYLFEKANESLARALLLLQIVHEWELPLRQRCNTFLEVFGNALLQERTSEFIEEKAKELVELVCNEHGR------------LADLVDVSHLKMKDRDALVETFQSWHTSVPFD-------IVKLRDHRLRHFYENRYDYRANLFDWDYTMSLKKIDQASVIHARQFKEWRNSG 229          
BLAST of mRNA_P-wetherbeei_contig15428.1.1 vs. uniprot
Match: A0A3R7ABM3_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7ABM3_9STRA)

HSP 1 Score: 194 bits (493), Expect = 7.300e-56
Identity = 104/244 (42.62%), Postives = 150/244 (61.48%), Query Frame = 1
Query:   52 LWGYTPALDLLSDLGE-RVPQSQSGRSSAEGGEINILVVQPGDIGHILRTLACKRRHLHTTVNLYVWDRPLEALARHLLLLQVAHDSELPTRHRANAFLEIYGNTKVQERTSRYIARLAEELIEFVCSDXXXXXXXXXXXXXXXLSALVDLSLLKFKERDALEAAFKSWGHSVPYDGEF--------FLDGVDKLRDQRLRHFFKERYDVRRNLVDWDYTGRLKPV--AGVVHLKQYRAWRLDG 750
            +WG++P+ DL   + E R   +Q    ++    + +LVV PGDI H+L T+A  RR     +++Y++++  E LAR LLLLQVA+D E+P R R N FLE++GN  VQERT+ YI   A++L+  VC++               L+ +VDLS LK K RDAL  AF+SW  SVP++G              V++LRDQRLRH+++ RYD R NL+DWDYT  LK +  A V+H++Q++ WR  G
Sbjct:    1 MWGFSPSFDLQEGVSELRGDSNQLEADASSTDPLCVLVVSPGDIRHVLTTIARSRRWKKRPLHIYLYEKSPECLARALLLLQVANDWEIPLRQRCNTFLEVFGNALVQERTAEYIEEKAKQLVHLVCNESGH------------LADIVDLSHLKMKTRDALVEAFQSWHTSVPFNGTSEHPCCRTSHERAVERLRDQRLRHYYENRYDYRNNLIDWDYTMSLKKIQDASVIHVRQFKEWRNTG 232          
BLAST of mRNA_P-wetherbeei_contig15428.1.1 vs. uniprot
Match: A0A7S2W2N3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W2N3_9STRA)

HSP 1 Score: 192 bits (489), Expect = 7.600e-55
Identity = 109/242 (45.04%), Postives = 143/242 (59.09%), Query Frame = 1
Query:   28 ESGMGAHALWGYTPALDLLSDLGERVPQSQSGRSSAEGGEINILVVQPGDIGHILRTLACKRRHLH-TTVNLYVWDRPLEALARHLLLLQVAHDSELPTRHRANAFLEIYGNTKVQERTSRYIARLAEELIEFVCSDXXXXXXXXXXXXXXXLSALVDLSLLKFKERDALEAAFKSWGHSVPYDGEFFLDGVDKLRDQRLRHFFKERYDVRRNLVDWDYTGRLKPVAGVVHLKQYRAWRLDG 750
            E+G+G HA+WG++PA+DLL     R P+    R         +L+  P DI H+L ++A + R      V   V +R LE LARHLLL+Q+A D ELP RHRAN  LE++GN  VQ RT RYI RLA +L   +C                 L+ +VDLS LK++ERD+L   F SW  +  +D       VD LRD RLR  F +RYD R+N+VDWDY  R++P AGV+H K YR WRL+G
Sbjct:   25 EAGLGLHAMWGFSPAVDLLDACPVR-PRDCPRR---------VLLGCPSDIRHVLVSMARRHRSCDGAPVEFTVVERQLEVLARHLLLMQIAFDWELPVRHRANVLLEVFGNVHVQSRTQRYIERLARQLETLICDGRGV------------LAGVVDLSRLKYRERDSLVNIFHSWRSTSTFD-------VDGLRDHRLRALFGQRYDSRKNVVDWDYQSRIRPKAGVIHSKLYRDWRLNG 237          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15428.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKR3_ECTSI4.010e-7152.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2W9D7_9STRA4.620e-6247.50Hypothetical protein (Fragment) n=1 Tax=labyrinthu... [more]
A0A6A5AKG1_9STRA8.700e-5941.49Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A485KSI8_9STRA2.220e-5742.92Aste57867_11297 protein n=1 Tax=Aphanomyces stella... [more]
A0A7S2BEA7_9STRA1.150e-5646.09Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A6G0XPS5_9STRA2.380e-5643.57Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W4HAQ6_9STRA3.090e-5641.49Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A067CNW4_SAPPC4.550e-5642.92Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A3R7ABM3_9STRA7.300e-5642.62Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A7S2W2N3_9STRA7.600e-5545.04Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15428contigP-wetherbeei_contig15428:6..1420 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FKR3
Preferred nameDNAAF3
PFAMsDUF4470,DUF4471
Model size750
Max annot lvl2759|Eukaryota
KEGG koko:K19752
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0001578,GO:0003341,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007275,GO:0007368,GO:0007389,GO:0007507,GO:0008150,GO:0009799,GO:0009855,GO:0009987,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0032501,GO:0032502,GO:0034622,GO:0035082,GO:0043933,GO:0044085,GO:0044458,GO:0044782,GO:0048513,GO:0048731,GO:0048856,GO:0060271,GO:0065003,GO:0070286,GO:0070925,GO:0071840,GO:0072359,GO:0120031,GO:0120036
Exons4
Evalue6.11e-72
EggNOG OGs28KT2@1|root,2QT97@2759|Eukaryota
Ec32 ortholog descriptionDynein assembly factor 3, C-terminal domain
Ec32 orthologEc-21_001820.2
Descriptionmotile cilium assembly
Cds size744
COG categoryS
BRITEko00000,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186055.6522305-CDS-P-wetherbeei_contig15428:5..1571683186055.6522305-CDS-P-wetherbeei_contig15428:5..157Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15428 6..157 -
1683186055.662895-CDS-P-wetherbeei_contig15428:493..7191683186055.662895-CDS-P-wetherbeei_contig15428:493..719Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15428 494..719 -
1683186055.6718354-CDS-P-wetherbeei_contig15428:943..10781683186055.6718354-CDS-P-wetherbeei_contig15428:943..1078Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15428 944..1078 -
1683186055.680677-CDS-P-wetherbeei_contig15428:1183..14141683186055.680677-CDS-P-wetherbeei_contig15428:1183..1414Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15428 1184..1414 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186055.6893537-UTR-P-wetherbeei_contig15428:1414..14201683186055.6893537-UTR-P-wetherbeei_contig15428:1414..1420Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig15428 1415..1420 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15428.1.1prot_P-wetherbeei_contig15428.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15428 6..1414 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15428.1.1

>prot_P-wetherbeei_contig15428.1.1 ID=prot_P-wetherbeei_contig15428.1.1|Name=mRNA_P-wetherbeei_contig15428.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=248bp
MAPSSLMESGMGAHALWGYTPALDLLSDLGERVPQSQSGRSSAEGGEINI
LVVQPGDIGHILRTLACKRRHLHTTVNLYVWDRPLEALARHLLLLQVAHD
SELPTRHRANAFLEIYGNTKVQERTSRYIARLAEELIEFVCSDDSSSGGG
DRGGGGGGLSALVDLSLLKFKERDALEAAFKSWGHSVPYDGEFFLDGVDK
LRDQRLRHFFKERYDVRRNLVDWDYTGRLKPVAGVVHLKQYRAWRLDG
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mRNA from alignment at P-wetherbeei_contig15428:6..1420-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15428.1.1 ID=mRNA_P-wetherbeei_contig15428.1.1|Name=mRNA_P-wetherbeei_contig15428.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1415bp|location=Sequence derived from alignment at P-wetherbeei_contig15428:6..1420- (Phaeothamnion wetherbeei SAG_119_79)
GCAAAAATGGCGCCATCTTCTTTAATGGAGAGCGGCATGGGCGCCCACGC CCTTTGGGGTTACACGCCGGCCCTGGATCTGCTGTCGGATCTTGGGGAGC GGGTGCCACAGAGCCAAAGCGGACGAAGCAGCGCCGAAGGTGGCGAGATC AACATCCTCGTCGTCCAGCCTGGCGATATTGGGCACATCCTCAGAACCCT CGCTTGCAAGCGCCGCCACCTGCACACGACGGTCAATGTATGTACCTCAT TTCTTGCGATGCTTGCAAATTGTTATGCAAAAGTTGACTCGTTCGCTTTA GAAAACACGCGCGCCTCGACGGATGCCAATAAAAAATTACAGCTGTACGT GTGGGATCGCCCGTTGGAGGCGCTGGCGCGTCACCTCTTGCTACTACAAG TCGCACACGACTCGGAGCTTCCCACTCGTCATCGCGCCAACGCCTTCTTG GAGATTTACGGCAACACGAAGGTCCAGGTATGTTTTTATCCTTGAGAAAG AAGGTCCAGGTATGTTTACCCTTGAGAAAGATCGTCTGGAGAACATTTGG CAGGGCAGCACAGGGTTTCCTGAAATAAGACTGGAGGGTGCCTACCTTTC TTTAAATGTTATTCGTTCGCTTATCAACTAGCCCTGGCGCTAATCCGTGC ACGAGCGCTGGAAACAAAGAAACACGACGACCATCTCACATCAGAAAACA GGAAAGGACATCACGATACATCGCGCGGCTCGCCGAGGAGCTCATCGAGT TTGTTTGCAGTGATGACAGCAGTAGCGGCGGCGGTGATCGTGGCGGCGGC GGCGGCGGCCTGTCTGCGCTGGTGGACCTGTCGTTGCTAAAGTTCAAGGA GCGCGACGCCCTCGAGGCCGCCTTCAAGAGCTGGGGCCACTCCGTTCCGT ACGACGGCGAGTTCTTTTTGGACGGCGGTTGGGAGTGAGCAGGAGCAGGA AATAGAGATTCTAAAGGGAACTGTCCGCGAGTAAAGCGCATGGCAGCCTG GGCTTCCGCTTGCGTATTAACTGATGCTCTCCACTGGAGTGAATCAAGAA GAACGGGCCTGTGTTCGTCCTTCAGGCGCATCGACCTTCTGTCTGCTCCG CCTTCCCTCTTTCCCCGGCTCTTTCTTTCTCGGCTTGGCGCCCGTTCTGC TGCACGGCGACCGCCGTCCCATCTCCATCACGGCCCATGGCAAAAAATAA ACAACGACCAACGGTCAACGACAAACGAATGGACGCGCAATCAATGCCGG CTGGGGTGCACAGTGGACAAGCTGCGGGACCAGCGGCTGCGGCACTTCTT CAAGGAACGCTACGACGTTAGGCGCAACCTGGTGGACTGGGATTACACTG GCCGCCTCAAGCCCGTCGCCGGGGTCGTTCACCTCAAGCAGTATCGAGCA TGGCGCCTCGACGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15428:6..1420-

>mRNA_P-wetherbeei_contig15428.1.1 ID=mRNA_P-wetherbeei_contig15428.1.1|Name=mRNA_P-wetherbeei_contig15428.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=744bp|location=Sequence derived from alignment at P-wetherbeei_contig15428:6..1420- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGCCATCTTCTTTAATGGAGAGCGGCATGGGCGCCCACGCCCTTTG
GGGTTACACGCCGGCCCTGGATCTGCTGTCGGATCTTGGGGAGCGGGTGC
CACAGAGCCAAAGCGGACGAAGCAGCGCCGAAGGTGGCGAGATCAACATC
CTCGTCGTCCAGCCTGGCGATATTGGGCACATCCTCAGAACCCTCGCTTG
CAAGCGCCGCCACCTGCACACGACGGTCAATCTGTACGTGTGGGATCGCC
CGTTGGAGGCGCTGGCGCGTCACCTCTTGCTACTACAAGTCGCACACGAC
TCGGAGCTTCCCACTCGTCATCGCGCCAACGCCTTCTTGGAGATTTACGG
CAACACGAAGGTCCAGGAAAGGACATCACGATACATCGCGCGGCTCGCCG
AGGAGCTCATCGAGTTTGTTTGCAGTGATGACAGCAGTAGCGGCGGCGGT
GATCGTGGCGGCGGCGGCGGCGGCCTGTCTGCGCTGGTGGACCTGTCGTT
GCTAAAGTTCAAGGAGCGCGACGCCCTCGAGGCCGCCTTCAAGAGCTGGG
GCCACTCCGTTCCGTACGACGGCGAGTTCTTTTTGGACGGCGTGGACAAG
CTGCGGGACCAGCGGCTGCGGCACTTCTTCAAGGAACGCTACGACGTTAG
GCGCAACCTGGTGGACTGGGATTACACTGGCCGCCTCAAGCCCGTCGCCG
GGGTCGTTCACCTCAAGCAGTATCGAGCATGGCGCCTCGACGGC
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