mRNA_P-wetherbeei_contig15397.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15397.2.1
Unique NamemRNA_P-wetherbeei_contig15397.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15397.2.1 vs. uniprot
Match: A0A7S2UHV0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UHV0_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 3.380e-18
Identity = 55/143 (38.46%), Postives = 85/143 (59.44%), Query Frame = 1
Query:   13 CASNDPNYDYSVVLLGANTIAMAWKVNDANGTVSVKLTYNGDGWVGWGPSPNGNMIGSDAVIGLPDDG-VYEYHLYAKELSAVKKYP--QQELTDASVVQSNGVTTVKFTRPLQPAAGKLPMPVSADFMSVFAHGAINALSEH 432
            C S +  YD  V L  ++ +++ W   + N +V++K  Y+G GWV  G +PNG+MIG++AVIGLPD+G V +Y L  K  S++      Q  L   S+ Q+NG T +KF + L+  +G+L +    + + +FA G  NALS H
Sbjct:  254 CPSIEDGYDSMVKL--SSGLSLHWSFVNGNKSVTMKAIYDGAGWVAIGVTPNGDMIGAEAVIGLPDEGTVQKYELNDKSTSSITPLEKGQDTLKGTSITQANGKTILKFEKILK-ESGELEIKAKGETLFMFAVGNTNALSFH 393          
BLAST of mRNA_P-wetherbeei_contig15397.2.1 vs. uniprot
Match: A0A6H5JKV6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKV6_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 7.270e-17
Identity = 59/156 (37.82%), Postives = 87/156 (55.77%), Query Frame = 1
Query:   13 CASNDPNYDYSVVLLGANTIAMAWKVNDANGTVSVKLTYNGDGWVGWGPSPNGNMIGSDAVIGLPDDGV---YEYHLYAKELSAVKKYPQQELTDASVVQSNGVTTVKFTRPLQPAA-GKLPMPVSADFMSVFAHGAINALSEHPANAMGAATLSF 468
            CAS+DP+++Y V       +A+ W V     +VSVK  Y G+G++  G S +G+M GSDAVIGLPD+     Y+   Y     A      QE+++A++ Q +GVTT+ F R L+PA  GK  + VS     ++A G  N   EH  +  GA +L+ 
Sbjct:  211 CASSDPDFEYEVAP--HEDLALFWSV--VGTSVSVKAVYQGEGYLSIGFSDSGSMPGSDAVIGLPDEATALEYDMDSYGTPEEAA----DQEISNATITQVDGVTTLTFVRLLEPAGDGKQILSVSEPTAWLYAWGGSNTFQEH--STRGAVSLTL 356          
BLAST of mRNA_P-wetherbeei_contig15397.2.1 vs. uniprot
Match: A0A6H5K4J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4J1_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 3.300e-14
Identity = 46/116 (39.66%), Postives = 69/116 (59.48%), Query Frame = 1
Query:   76 MAWKVNDANGTVSVKLTYNGDGWVGWGPSPNGNMIGSDAVIGLPD-DGVYEYHLYAKELSAVKKYPQQELTDASVVQSNGVTTVKFTRPLQPAA-GKLPMPVSADFMSVFAHGAIN 417
            ++W V+     ++V+  Y G GW+  G S +G M GSDAVIGLP  + V EY +   + S       QE++DA++ Q+ GVTT+KF RPL+P+  GK  + VS   + ++A G  N
Sbjct:  140 LSWTVDTDTQEITVEAVYQGSGWLAIGWSDSGRMPGSDAVIGLPSAETVLEYDM--PDYSTPSASAVQEISDATITQAGGVTTLKFVRPLEPSGDGKQLLSVSDPAIWLYAWGGSN 253          
BLAST of mRNA_P-wetherbeei_contig15397.2.1 vs. uniprot
Match: A0A835YVQ1_9STRA (DOMON domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVQ1_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 4.570e-14
Identity = 42/89 (47.19%), Postives = 53/89 (59.55%), Query Frame = 1
Query:  121 LTYNGDGWVGWGPSPNGNMIGSDAVIGLPDDGVYEYHLYAKELSAVKKYPQQELTDASVVQS-NGVTTVKFTRPLQPAAGKLPMPVSAD 384
            + Y+  GWV WG S NG M GS AVIG+P DGVYEY L  +  S V++   Q L  A+ + +  GVTT+ FTRPL   AG L    + D
Sbjct:    1 MVYSDAGWVSWGISSNGMMAGSQAVIGIPGDGVYEYDLVTRNESGVRRRAAQTLLSAAAISTLGGVTTMDFTRPL---AGALSTDTTLD 86          
BLAST of mRNA_P-wetherbeei_contig15397.2.1 vs. uniprot
Match: K0T574_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T574_THAOC)

HSP 1 Score: 78.2 bits (191), Expect = 6.800e-14
Identity = 49/123 (39.84%), Postives = 72/123 (58.54%), Query Frame = 1
Query:  106 TVSVKLTYNGDGWVGWGPSPNGNMIGSDAVIGLPDDGVYEYHLYAKELSAVKKYP--QQELTDASVVQSNGVTTVKFTRPLQPAAGKLPMPVSADFMSVFAHGAINALSEHPANAMGAATLSF 468
            T+SV++ Y+GD W+  G S +G M+GSDAVIG+P  GV +Y +  K +S V + P  QQ LTD+SV      T +KFT+ +     ++P+ V  D M ++A+G+   L  H   A  A  LS 
Sbjct:  250 TMSVEMYYDGDAWIALGFSTDGQMVGSDAVIGIPGSGVSKYVMAGKTVSQVTEMPESQQTLTDSSVEFDGQQTVMKFTK-IMDEPDEVPIVVG-DNMFLWAYGSSPTLGYHAGRASFALDLSI 370          
BLAST of mRNA_P-wetherbeei_contig15397.2.1 vs. uniprot
Match: D7FJ77_ECTSI (Ferric reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ77_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 3.710e-13
Identity = 47/140 (33.57%), Postives = 78/140 (55.71%), Query Frame = 1
Query:   16 ASNDPNYDYSVVLLGANTIAMAWKVNDANGTVSVKLTYNGDGWVGWG-PSPNGNMIGSDAVIGLPDDG-VYEYHLYAKELSAVKKYPQQELTDASVVQSNGVTTVKFTRPLQPAAGKLPMP-VSADFMS-VFAHGAINAL 423
            AS    YD+ V  +  +   + W +N+    +++++  +   W G G PS + +++GSD +IGLPD+  V EY +  +    V  + QQ++T+AS+VQ++G TT+ F RPL P   K  +  V+ D    +F  GA N L
Sbjct:   30 ASAVDGYDFEV--MPEDGYEIRWTLNNDTKMIAIQMVTSSVAWAGIGFPSVDLDLVGSDVIIGLPDNSSVLEYEVLGETAEEVVVFEQQDITEASIVQADGSTTLSFIRPLSPGGNKQNISYVAGDATKLIFGQGADNEL 167          
BLAST of mRNA_P-wetherbeei_contig15397.2.1 vs. uniprot
Match: B8C0P1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0P1_THAPS)

HSP 1 Score: 73.6 bits (179), Expect = 2.670e-12
Identity = 44/115 (38.26%), Postives = 66/115 (57.39%), Query Frame = 1
Query:   97 ANGTVSVKLTYNGDGWVGWGPSPNGNMIGSDAVIGLPDD-GVYEYHLYAKELSAVKKYPQQELTDASVVQSNGVTTVKFTRPLQPAAGKLPMPVSADFMSVFAHGAINALSEHPA 438
            +NG +  +L    +GWV    SPNG MIGS+A+IGLPDD  V +Y L A    +     +Q L D S+ QSNG T ++FT+ L+    ++ +      + ++A G+ NAL+ H A
Sbjct:   87 SNGFLCARLEVEDEGWVALAVSPNGQMIGSEAIIGLPDDDSVLKYSLDAYSNPSPMDDSKQTLMDTSITQSNGKTVMEFTKLLE-EDDEISIVEEGTNIFLYASGSSNALAYHSA 200          
BLAST of mRNA_P-wetherbeei_contig15397.2.1 vs. uniprot
Match: A0A7S4T620_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T620_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 5.120e-12
Identity = 52/152 (34.21%), Postives = 82/152 (53.95%), Query Frame = 1
Query:   13 CASNDPNYDYSVVLLGANTIAMAWKV----NDANGTVSVKLTYNGDGWVGWGPSPNGNMIGSDAVIGLPD----DGVYEYHLYAKELSAVKKYP--QQELTDASVVQSNGVTTVKFTRPLQPAAGKLPMPVSADFMS--VFAHGAINALSEH 432
            CAS+DP+Y + +V + + T    W +    ND    V+ KL + G  W+G+G S +G+MIGS+A+IG+PD    D   ++ L AK +  +   P  QQ L +A + Q N +TT+ F + L        + +SAD M+  ++A G  N    H
Sbjct:  342 CASDDPDYLH-MVKINSKT-KFHWNLDVWSNDTPPAVNGKLVFEGQAWLGFGFSFDGSMIGSEAIIGIPDHEDFDRPLKFKLGAKNVGEITPLPDAQQTLLNAEITQKNRITTLTFKKLLS-EDNTDELEISADGMNNFIYAVGTSNTFGYH 490          
BLAST of mRNA_P-wetherbeei_contig15397.2.1 vs. uniprot
Match: UPI00094E9FB0 (DBH-like monooxygenase protein 2 homolog isoform X1 n=2 Tax=Hippocampus comes TaxID=109280 RepID=UPI00094E9FB0)

HSP 1 Score: 72.4 bits (176), Expect = 6.780e-12
Identity = 45/141 (31.91%), Postives = 76/141 (53.90%), Query Frame = 1
Query:   22 NDPNYDYSVVLLGANTIAMAWKVNDANGTVSVKLTYNGDGWVGWGPSPNGNMIGSDAVIG-LPDDGVYEYHLYAKELSAVKKYPQQELTDASVVQSNGVTTVKFTRPLQPAAGKLPMPVSADFMS-VFAHGAINALSEHPA 438
            +DP+  +   L   + + + W  +D  G ++ K   N  GW+G+G SPNG+MIG+D V+G +  DG Y    Y+ E S   +  QQ  T  ++ +S+G T + F+R LQ       +P++A  M  ++A+G  + +  H A
Sbjct:   75 SDPSLPFMDYLDTDHLVCIKWGFDDQQGNITFKFIVNTTGWIGFGLSPNGDMIGADLVMGGVGPDGNYFKDYYSTENSYPIEDQQQSYTLLALNESDGQTLMTFSRALQ-TCDHQDLPITAQPMKLIYAYGLTDEIGFHAA 214          
BLAST of mRNA_P-wetherbeei_contig15397.2.1 vs. uniprot
Match: A0A835YJT7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJT7_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 4.270e-11
Identity = 51/127 (40.16%), Postives = 68/127 (53.54%), Query Frame = 1
Query:    4 SGSCASNDPNYDYSVVLLGANTIA-MAWKVNDANGTVSVKL--TYNGDGWVGWGPSPNGNMIGSDAVIGLPDDG-VYEYHLYAKELSAV--KKYPQQELTDASVVQSNGVTTVKFTRPLQPAAGKLP 366
            S SC S  P +D+S  L   N  A M W +   +G  SVK+   Y+G+GWVGWG SP+G M+G  A+I +P  G V EY L  + ++ V  K       T AS+  +   TT+ F RPL   AG  P
Sbjct:  200 SASCTSI-PGFDFSQSL---NAKAKMYWSLVTVDGVDSVKMRVVYDGNGWVGWGTSPDGQMVGGTAIIAVPATGSVAEYDLNGERVAQVVAKDPSTYTFTSASITPTPTSTTLDFVRPL---AGTAP 319          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15397.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2UHV0_9STRA3.380e-1838.46Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A6H5JKV6_9PHAE7.270e-1737.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K4J1_9PHAE3.300e-1439.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YVQ1_9STRA4.570e-1447.19DOMON domain-containing protein n=1 Tax=Tribonema ... [more]
K0T574_THAOC6.800e-1439.84Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
D7FJ77_ECTSI3.710e-1333.57Ferric reductase n=1 Tax=Ectocarpus siliculosus Ta... [more]
B8C0P1_THAPS2.670e-1238.26Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S4T620_9STRA5.120e-1234.21Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
UPI00094E9FB06.780e-1231.91DBH-like monooxygenase protein 2 homolog isoform X... [more]
A0A835YJT7_9STRA4.270e-1140.16Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15397contigP-wetherbeei_contig15397:593..1384 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G2R8
PFAMsCDH-cyt,Cytochrom_B561,Cytochrom_C_asm,DM13,DOMON
Model size468
Max annot lvl2759|Eukaryota
KEGG rclassRC00003,RC00035
KEGG koko:K00547
KEGG ReactionR00650
KEGG Pathwayko00270,ko01100,ko01110,map00270,map01100,map01110
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0012505,GO:0031410,GO:0031982,GO:0031984,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0097708,GO:0098791
Exons2
Evalue3.68e-19
EggNOG OGsKOG4293@1|root,KOG4293@2759|Eukaryota
EC2.1.1.10
DescriptionDOMON domain-containing protein
Cds size468
COG categoryU
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186054.4656324-CDS-P-wetherbeei_contig15397:592..7731683186054.4656324-CDS-P-wetherbeei_contig15397:592..773Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15397 593..773 +
1683186054.4805253-CDS-P-wetherbeei_contig15397:1097..13841683186054.4805253-CDS-P-wetherbeei_contig15397:1097..1384Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15397 1098..1384 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15397.2.1prot_P-wetherbeei_contig15397.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15397 593..1384 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15397.2.1

>prot_P-wetherbeei_contig15397.2.1 ID=prot_P-wetherbeei_contig15397.2.1|Name=mRNA_P-wetherbeei_contig15397.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=156bp
TSGSCASNDPNYDYSVVLLGANTIAMAWKVNDANGTVSVKLTYNGDGWVG
WGPSPNGNMIGSDAVIGLPDDGVYEYHLYAKELSAVKKYPQQELTDASVV
QSNGVTTVKFTRPLQPAAGKLPMPVSADFMSVFAHGAINALSEHPANAMG
AATLSF
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mRNA from alignment at P-wetherbeei_contig15397:593..1384+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15397.2.1 ID=mRNA_P-wetherbeei_contig15397.2.1|Name=mRNA_P-wetherbeei_contig15397.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=792bp|location=Sequence derived from alignment at P-wetherbeei_contig15397:593..1384+ (Phaeothamnion wetherbeei SAG_119_79)
ACCAGCGGCAGTTGCGCCAGCAACGACCCGAACTATGATTACTCGGTGGT GTTGTTGGGAGCCAACACGATTGCGATGGCGTGGAAGGTAAACGACGCCA ACGGGACCGTTTCTGTGAAGCTGACGTACAACGGTGACGGCTGGGTGGGC TGGGGCCCGTCGCCGAACGGCAATATGATCGGTGAGTGGAAATTGGAGTG TTTTCTGGGATGGTGGTGGCAAGGGCCGTGAAAGTGAAAGACGTGCTTCA ACGGAGATTGGGGTTTGAGAATTTCGCCGCTGTCATTAAGAATGCCTGCC TTGTGCAGAAAGAATACGTTTGCTTGTTGTTGGGGGCGTTGGGCTCACGC CGGGCTGAATACGCTCACGGAGAGCTCCCCAACCCCCCCAAGGGAGAAAG ATATCGCGGCCAAAACAAACATTTCCTCTCCTTGCTAACTCCTCTAACGT CCTCTTCTGTAACGCCCTTTTATGCAATGTCCTTCCTTGCGGCGGTACAC TCCAGGCTCCGACGCAGTCATTGGCCTGCCGGACGACGGCGTGTACGAGT ACCACCTCTACGCGAAGGAGCTTTCTGCCGTCAAGAAATACCCCCAGCAG GAGCTCACCGACGCCAGCGTCGTCCAATCGAACGGCGTCACCACCGTCAA ATTCACCCGGCCGCTCCAGCCGGCAGCAGGGAAGCTCCCGATGCCGGTTT CAGCCGACTTTATGTCGGTATTCGCCCATGGGGCAATTAATGCGCTGTCG GAGCACCCGGCGAACGCGATGGGCGCGGCGACGCTGAGCTTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15397:593..1384+

>mRNA_P-wetherbeei_contig15397.2.1 ID=mRNA_P-wetherbeei_contig15397.2.1|Name=mRNA_P-wetherbeei_contig15397.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=468bp|location=Sequence derived from alignment at P-wetherbeei_contig15397:593..1384+ (Phaeothamnion wetherbeei SAG_119_79)
ACCAGCGGCAGTTGCGCCAGCAACGACCCGAACTATGATTACTCGGTGGT
GTTGTTGGGAGCCAACACGATTGCGATGGCGTGGAAGGTAAACGACGCCA
ACGGGACCGTTTCTGTGAAGCTGACGTACAACGGTGACGGCTGGGTGGGC
TGGGGCCCGTCGCCGAACGGCAATATGATCGGCTCCGACGCAGTCATTGG
CCTGCCGGACGACGGCGTGTACGAGTACCACCTCTACGCGAAGGAGCTTT
CTGCCGTCAAGAAATACCCCCAGCAGGAGCTCACCGACGCCAGCGTCGTC
CAATCGAACGGCGTCACCACCGTCAAATTCACCCGGCCGCTCCAGCCGGC
AGCAGGGAAGCTCCCGATGCCGGTTTCAGCCGACTTTATGTCGGTATTCG
CCCATGGGGCAATTAATGCGCTGTCGGAGCACCCGGCGAACGCGATGGGC
GCGGCGACGCTGAGCTTT
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