mRNA_P-wetherbeei_contig15378.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15378.1.1 vs. uniprot
Match: A0A7S2US42_9STRA (COX assembly mitochondrial protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US42_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 2.500e-18 Identity = 36/68 (52.94%), Postives = 50/68 (73.53%), Query Frame = 1
Query: 1 RLQEELKLIALKKCDDQVRAFVECSKANGILVVLSCRRESAGMNECLHTYTNPERFAEYKTIREAELL 204
RLQ+EL +AL+KC DQV+AF +CSK +G LV+ SCR ++ MNECLH+YT+ E Y+ RE +L+
Sbjct: 21 RLQQELNEVALQKCADQVKAFADCSKDSGFLVIWSCREQNKAMNECLHSYTSQECLEAYQREREQQLM 88
BLAST of mRNA_P-wetherbeei_contig15378.1.1 vs. uniprot
Match: D8LC11_ECTSI (COX assembly mitochondrial protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC11_ECTSI) HSP 1 Score: 78.6 bits (192), Expect = 2.270e-17 Identity = 38/67 (56.72%), Postives = 47/67 (70.15%), Query Frame = 1
Query: 1 RLQEELKLIALKKCDDQVRAFVECSKANGILVVLSCRRESAGMNECLHTYTNPERFAEYKTIREAEL 201
RL+EELK IALK+CDD V F C++ G+LVV SCR ++A MN CL+ +TN E F YK RE EL
Sbjct: 22 RLREELKEIALKRCDDSVAKFAACAREKGMLVVFSCREQNALMNSCLNQHTNEESFDRYKFEREIEL 88
BLAST of mRNA_P-wetherbeei_contig15378.1.1 vs. uniprot
Match: A0A1V9Z786_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z786_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 3.600e-15 Identity = 32/63 (50.79%), Postives = 47/63 (74.60%), Query Frame = 1
Query: 1 RLQEELKLIALKKCDDQVRAFVECSKANGILVVLSCRRESAGMNECLHTYTNPERFAEYKTIR 189
+L +EL IALKKC D+ +AFV+CS +G+LVV CR+++A +N CLH YTNPE + ++K +
Sbjct: 254 KLHQELNTIALKKCYDKTKAFVDCSHEHGLLVVFKCRQQNADLNACLHEYTNPEAYEKFKASK 316
BLAST of mRNA_P-wetherbeei_contig15378.1.1 vs. uniprot
Match: A0A7S1HEC8_HEMAN (COX assembly mitochondrial protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HEC8_HEMAN) HSP 1 Score: 66.6 bits (161), Expect = 2.190e-12 Identity = 26/58 (44.83%), Postives = 42/58 (72.41%), Query Frame = 1
Query: 28 ALKKCDDQVRAFVECSKANGILVVLSCRRESAGMNECLHTYTNPERFAEYKTIREAEL 201
A KKCD ++AFV+CSKANG++VV +CR+++ M +C+H T E++ + R+AE+
Sbjct: 44 AAKKCDPIIKAFVDCSKANGLMVVFNCRKQNEAMQQCMHEETTEEKYEAVRVQRQAEM 101
BLAST of mRNA_P-wetherbeei_contig15378.1.1 vs. uniprot
Match: A0A7S2RG50_9STRA (COX assembly mitochondrial protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RG50_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 2.990e-11 Identity = 24/47 (51.06%), Postives = 36/47 (76.60%), Query Frame = 1
Query: 40 CDDQVRAFVECSKANGILVVLSCRRESAGMNECLHTYTNPERFAEYK 180
CDD+VRAFV+CSK NG++V+ CR E+ MNEC+ YT E++ +++
Sbjct: 33 CDDKVRAFVDCSKENGLMVIFRCREENKIMNECVQNYTTDEKWEQFR 79
BLAST of mRNA_P-wetherbeei_contig15378.1.1 vs. uniprot
Match: A0A433QLM6_9FUNG (COX assembly mitochondrial protein n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QLM6_9FUNG) HSP 1 Score: 62.8 bits (151), Expect = 4.130e-11 Identity = 28/60 (46.67%), Postives = 41/60 (68.33%), Query Frame = 1
Query: 10 EELKLIALKKCDDQVRAFVECSKANGILVVLSCRRESAGMNECLHTYTNPERFAEYKTIR 189
+ELK ALKKCDD ++ FV+CSK + + V+ SCR +S MN+CL++YT E + K +
Sbjct: 34 KELKATALKKCDDVIQDFVQCSKDHTVTVIFSCRGKSRVMNKCLNSYTTQEELDKLKLTK 93
BLAST of mRNA_P-wetherbeei_contig15378.1.1 vs. uniprot
Match: A0A7S0YVI3_9CRYP (COX assembly mitochondrial protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YVI3_9CRYP) HSP 1 Score: 58.2 bits (139), Expect = 5.140e-9 Identity = 26/58 (44.83%), Postives = 38/58 (65.52%), Query Frame = 1
Query: 28 ALKKCDDQVRAFVECSKANGILVVLSCRRESAGMNECLHTYTNPERFAEYKTIREAEL 201
A KKCD ++AFV+CSKAN ++VV +CR +S MN C+ T E + +T R+A +
Sbjct: 51 AAKKCDPFIKAFVDCSKANNLMVVFNCRNQSHEMNLCMAAETTEEIYETVRTQRQAAM 108
BLAST of mRNA_P-wetherbeei_contig15378.1.1 vs. uniprot
Match: A0A316YZ82_9BASI (COX assembly mitochondrial protein n=1 Tax=Acaromyces ingoldii TaxID=215250 RepID=A0A316YZ82_9BASI) HSP 1 Score: 51.6 bits (122), Expect = 6.160e-7 Identity = 24/57 (42.11%), Postives = 32/57 (56.14%), Query Frame = 1
Query: 4 LQEELKLIALKKCDDQVRAFVECSKANGILVVLSCRRESAGMNECLHTYTNPERFAE 174
L +E K ALKKCDD V+ F +CS + V +CR + + +CL YT PE E
Sbjct: 14 LLKETKQEALKKCDDVVKDFAQCSSGRTVSVAWACRDQHRKLQDCLKQYTGPEAMEE 70
BLAST of mRNA_P-wetherbeei_contig15378.1.1 vs. uniprot
Match: A0A066VUL6_TILAU (COX assembly mitochondrial protein n=1 Tax=Tilletiaria anomala (strain ATCC 24038 / CBS 436.72 / UBC 951) TaxID=1037660 RepID=A0A066VUL6_TILAU) HSP 1 Score: 49.3 bits (116), Expect = 5.320e-6 Identity = 23/53 (43.40%), Postives = 32/53 (60.38%), Query Frame = 1
Query: 4 LQEELKLIALKKCDDQVRAFVECSKANGILVVLSCRRESAGMNECLHTYTNPE 162
L ++ K ALKKCD+ V+AF +CS+ I V +CR + M CL YT+ E
Sbjct: 14 LLKQTKADALKKCDEFVKAFADCSRGRTISVAWACRGDHKAMQGCLRQYTSEE 66
BLAST of mRNA_P-wetherbeei_contig15378.1.1 vs. uniprot
Match: A0A5J4Z510_PORPP (COX assembly mitochondrial protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z510_PORPP) HSP 1 Score: 47.4 bits (111), Expect = 5.960e-5 Identity = 20/51 (39.22%), Postives = 29/51 (56.86%), Query Frame = 1
Query: 28 ALKKCDDQVRAFVECSKANGILVVLSCRRESAGMNECLHTYTNPERFAEYK 180
A +CD + +AF ECSK G++VV CR E +N+CL ++ E K
Sbjct: 49 AWMQCDPETKAFYECSKREGLMVVFKCRGEKNVLNDCLKQFSTEENHIALK 99 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15378.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15378.1.1 >prot_P-wetherbeei_contig15378.1.1 ID=prot_P-wetherbeei_contig15378.1.1|Name=mRNA_P-wetherbeei_contig15378.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=73bp RLQEELKLIALKKCDDQVRAFVECSKANGILVVLSCRRESAGMNECLHTYback to top mRNA from alignment at P-wetherbeei_contig15378:1091..1553+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15378.1.1 ID=mRNA_P-wetherbeei_contig15378.1.1|Name=mRNA_P-wetherbeei_contig15378.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=463bp|location=Sequence derived from alignment at P-wetherbeei_contig15378:1091..1553+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15378:1091..1553+ >mRNA_P-wetherbeei_contig15378.1.1 ID=mRNA_P-wetherbeei_contig15378.1.1|Name=mRNA_P-wetherbeei_contig15378.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=219bp|location=Sequence derived from alignment at P-wetherbeei_contig15378:1091..1553+ (Phaeothamnion wetherbeei SAG_119_79)back to top |