mRNA_P-wetherbeei_contig15377.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15377.1.1
Unique NamemRNA_P-wetherbeei_contig15377.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15377.1.1 vs. uniprot
Match: A0A7C4TTX5_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TTX5_9HYPH)

HSP 1 Score: 258 bits (658), Expect = 1.450e-81
Identity = 124/244 (50.82%), Postives = 164/244 (67.21%), Query Frame = 1
Query:  166 RPPRPLIDYEAVLYRQPQLIEDTMAGIHASNPDAPSTYFVGFSAFSEQDVFLREIAQAREIVDERFGTRDRSLLLVNHILALDEVPLATITNLDIILTRLGRIMHPQKDTLILFLTSHGIENLFAIEFPPFPINHLTPPRLAEILDKSGINNRIVIISACHSGSFIPALKHPGTIVMTASRADRASFGCSNEADWTFFGNALFNHGLRTGKSLTDAFAAAKILIAGWEAKERFVPSEPQIFVGA 897
            +P R  +D E   YRQP+L+   +A I  +  D P  YFVGF+ +  + VF RE+   RE+ DERFGT+ RS++LVNH   ++EVPLA +TNLD +L  L  ++   +D L LFLTSHG++ +FA++ P F  N+LTP  L  +LD+SGI NR+V++SACHSGSFIPAL    T+V+TA+ A+R SFGC +   WT+FG+A FNH LR   S T AF  AK LI  WE KER  PS PQ+  GA
Sbjct:   31 QPRRIEVDVERAYYRQPELVSRALAEIDTARADRPQLYFVGFAGYGAEAVFKREVLAVRELFDERFGTKGRSIVLVNHASTVEEVPLANLTNLDRVLQHLSGLLDKNRDVLFLFLTSHGVKGVFAVDMPGFGFNNLTPQGLKAMLDRSGIKNRVVVVSACHSGSFIPALADANTLVITAAHAERTSFGCEDRRQWTYFGDAFFNHALREEVSFTKAFERAKRLIRQWERKERLTPSLPQVAGGA 274          
BLAST of mRNA_P-wetherbeei_contig15377.1.1 vs. uniprot
Match: A0A833FYE2_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A833FYE2_9HYPH)

HSP 1 Score: 237 bits (604), Expect = 2.850e-72
Identity = 134/323 (41.49%), Postives = 190/323 (58.82%), Query Frame = 1
Query:   10 PLLEADRLTFASGVRRTRRAAVLVSLAALFALTIAALPGI-----------PARAQGQPQREQRPPRPLIDYEAVLYRQPQLIEDTMAGIHASNPDAPSTYFVGFSAFSEQDVFLREIAQAREIVDERFGTRDRSLLLVNHILALDEVPLATITNLDIILTRLGRIMHPQKDTLILFLTSHGIENLFAIEFPPFPINHLTPPRLAEILDKSGINNRIVIISACHSGSFIPALKHPGTIVMTASRADRASFGCSNEADWTFFGNALFNHGLRTGKSLTDAFAAAKILIAGWEAKERFVPSEPQIFVGAEAGSMLARLPIRPAVE 945
            P +     +F  G      AA+L++ A  FA T     G            P+  +  P+R     R  ID +AV  RQ  LI + +AG+    P   + Y +  +AF++QDVF++E   AR+I+D+R GT+ RS+LLVNH  ++++ PL +I NLD  L  + ++M+  +D LILFLTSHG   +  + FP F +  +   +L+ +L  S I ++I+IISAC SGSFIPALK   T++MTASR+DR+SFGCSNE +WT+FG+A F   L+  +S T AF  AK  IA WE ++RF PSEPQIFVG      L  +  R   E
Sbjct:   48 PAMWTKLSSFWRGAAAALLAALLIAPAGTFAQTKGTTGGSQLETGVRPSPRPSEQRADPRRRPET-RSHIDVKAVYQRQKDLIAEAIAGLAPRIPGQSNVYLISAAAFADQDVFIKEATSARQILDDRLGTKGRSILLVNHPSSVEKAPLFSIANLDQSLRAIAQVMNRDEDVLILFLTSHGNPGVLNVSFPRFGLRDIEARQLSTLLKLSKIKHKIIIISACFSGSFIPALKDDYTLIMTASRSDRSSFGCSNEREWTYFGDAYFGRALKETRSFTKAFEEAKRTIAAWERQQRFTPSEPQIFVGPRIREKLEEIERRAESE 369          
BLAST of mRNA_P-wetherbeei_contig15377.1.1 vs. uniprot
Match: A0A2N2AFH8_9GAMM (CASPASE_P20 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium HGW-Gammaproteobacteria-1 TaxID=2013791 RepID=A0A2N2AFH8_9GAMM)

HSP 1 Score: 227 bits (578), Expect = 3.450e-67
Identity = 133/307 (43.32%), Postives = 178/307 (57.98%), Query Frame = 1
Query:   22 ADRLTFASGVRRTRRAAVLVSLAALFALTIAALPGIPARAQGQPQREQRPPRPLIDYEAVLYRQPQLIEDTMAGIHASNPDAPSTYFVGFSAFSEQDVFLREIAQAREIVDERFGTRDRSLLLVNHILALDEVPLATITNLDIILTRLGRIMHPQKDTLILFLTSHGIE-NLFAIEFPPFPINHLTPPRLAEILDKSGINNRIVIISACHSGSFIPALKHPGTIVMTASRADRASFGCSNEADWTFFGNALFNHGLRTGKSLTDAFAAAKILIAGWEAKERFVPSEPQIFVGAEAGSMLARLPIRPA 939
            A  L FA+G RRT  AA +     LF   +  LP   A      + ++ P +P++D EA  Y QP+L+   + G+    P  P  YFVG + ++EQDVFLRE+   R + D RF T  RSLLL+N+   + EVPLA  +NL  +L RLG +M P++D L L+LTSHG E +  AI + P  +N +   RL  +L +S I  R V+ISAC+SG FIP L    ++V+TAS ADR SFGCSNE  WT+FG A F+  L    S T AF  A   IA  E +E+  PS PQ +VG +    L R+  R A
Sbjct:  151 AQSLIFAAGRRRTAFAAAMYVGVLLFDALV--LPHTEAWYTVYAENDE-PAKPVLDVEATYYAQPELLATALDGLQPQRPGVPDIYFVGVAGWAEQDVFLREVRAVRRLFDTRFDTAGRSLLLINNPQTVTEVPLANASNLQRVLRRLGELMDPEEDMLFLYLTSHGSEEHELAIHYRPLRLNDIPATRLGAMLAESSIRRRAVVISACYSGGFIPPLNDAASMVLTASAADRKSFGCSNENAWTYFGEAYFDQALSQTHSFTAAFQQAAQAIAERETREKLEPSLPQSWVGEDIAQYLPRVERRLA 454          
BLAST of mRNA_P-wetherbeei_contig15377.1.1 vs. uniprot
Match: UPI00045E7D17 (caspase family protein n=1 Tax=Methylomicrobium lacus TaxID=136992 RepID=UPI00045E7D17)

HSP 1 Score: 219 bits (558), Expect = 2.450e-64
Identity = 112/248 (45.16%), Postives = 162/248 (65.32%), Query Frame = 1
Query:  184 IDYEAVLYRQPQLIEDTMAGIHASNPDAPSTYFVGFSAFSEQDVFLREIAQAREIVDERFGTRDRSLLLVNHILALDEVPLATITNLDIILTRLGRIMHPQKDTLILFLTSHGI-ENLFAIEFPPFPINHLTPPRLAEILDKSGINNRIVIISACHSGSFIPALKHPGTIVMTASRADRASFGCSNEADWTFFGNALFNHGLRTGKSLTDAFAAAKILIAGWEAKERFVPSEPQIFVGAEAGSMLARL 924
            +D EA+LYRQP L++DT+  +          ++VGF+ F+ +DVF  E    + + DERFGT   S+ LVNH+  L++ PLAT TNL+  L R+G++M+  +D L L+LTSHG  ++  A+EF P P+N LTP RL  +LDK+GI  R++++SAC+SG F+ ALK P T+V TA+ A+R SFGC +E+D+T+FG A+F   L+   SL  AF  A + IA  E +E+   S+PQ+ VG      LA L
Sbjct:  202 LDAEALLYRQPVLLDDTLNRLRPERKKHVDLFYVGFAGFATEDVFAVEADYIKRLFDERFGTAGHSVSLVNHLDTLEDTPLATATNLETTLKRVGKVMNRDEDVLFLYLTSHGSSDHKLAVEFWPLPLNDLTPERLKAMLDKAGIKWRVIVVSACYSGGFVDALKGPNTLVATAAAANRTSFGCGSESDFTYFGEAVFKEQLQNRFSLISAFKDAAVSIAKREQQEQLEASKPQLSVGPSIAPHLAAL 449          
BLAST of mRNA_P-wetherbeei_contig15377.1.1 vs. uniprot
Match: UPI00068F071D (hypothetical protein n=1 Tax=Nevskia soli TaxID=418856 RepID=UPI00068F071D)

HSP 1 Score: 219 bits (559), Expect = 3.810e-64
Identity = 133/307 (43.32%), Postives = 183/307 (59.61%), Query Frame = 1
Query:    1 RVLPLLEADRLTFASGVRRTRRAAVLVSL-AALFALTIAALPGIPARAQGQPQREQRPPRPLIDYEAVLYRQPQLIEDTMAGIHASNPDAPSTYFVGFSAFSEQDVFLREIAQAREIVDERFGTRDRSLLLVNHILALDEVPLATITNLDIILTRLGRIMHPQKDTLILFLTSHGIENL-FAIEFPPFPINHLTPPRLAEILDKSGINNRIVIISACHSGSFIPALKHPGTIVMTASRADRASFGCSNEADWTFFGNALFNHGLRTGKSLTDAFAAAKILIAGWEAKERFVPSEPQIFVGAEAGSML 915
            RVL LL A      S VRR   AAV+ ++ AALF      +P  P  +Q     + +  RP +  E V  RQ QL+   +A I  + P  PS YFV ++   EQDVF +E   +  +  ERFG   RSL LVN    + E+PLA+++NLD  L  +GR M+PQ+D L L+LTSHG  +   A E P    +    PRLA +L  SGI  +++++SAC+SGSF+ +LK   T+VMTA+RADR SFGCS++A++T+FG A    GL    S T+AFA A+ L+  WE +++ V SEPQI  GA  G+ L
Sbjct:  180 RVLSLLGA----MGSAVRRGAAAAVVAAVSAALFHY----IPYSPIWSQDYSADDAQEARPRLVAEEVFARQDQLMWQALANIAPTRPGKPSLYFVAYAPDGEQDVFRKEALYSTRLFAERFGAAQRSLTLVNSRSTVKELPLASVSNLDQGLRAIGRKMNPQQDILFLYLTSHGSRDATLATELPGLSFSSFNAPRLARMLKDSGIRWKVIVVSACYSGSFLDSLKDEHTLVMTAARADRTSFGCSDDAEFTYFGRAYLEQGLNRSTSFTEAFATARTLVEQWETRDKEVHSEPQIAEGALIGARL 478          
BLAST of mRNA_P-wetherbeei_contig15377.1.1 vs. uniprot
Match: H8GL39_METAL (Peptidase C13 family n=2 Tax=Methylomicrobium TaxID=39773 RepID=H8GL39_METAL)

HSP 1 Score: 213 bits (543), Expect = 4.200e-62
Identity = 111/248 (44.76%), Postives = 165/248 (66.53%), Query Frame = 1
Query:  184 IDYEAVLYRQPQLIEDTMAGIHASNPDAPSTYFVGFSAFSEQDVFLREIAQAREIVDERFGTRDRSLLLVNHILALDEVPLATITNLDIILTRLGRIMHPQKDTLILFLTSHG-IENLFAIEFPPFPINHLTPPRLAEILDKSGINNRIVIISACHSGSFIPALKHPGTIVMTASRADRASFGCSNEADWTFFGNALFNHGLRTGKSLTDAFAAAKILIAGWEAKERFVPSEPQIFVGAEAGSMLARL 924
            +D E ++YRQP L+E+T++ +  +       +++GF++++ +DVF  E    + + DERFGT   SL LVNH+  L++ PLAT TNL   L R+GRIM+P +D L L+LTSHG  ++  A+EF P P+N L+P +L  +LD++GI  R+V++SAC+SG+F+ ALK P T+V TA+  DR SFGC +E+D+T+FG A+F   L++  SL  AF AA   IA  E  E+   S PQ++VG    + LA L
Sbjct:  202 LDAERLMYRQPVLLEETLSRLRPARKGRVDLFYLGFASYATEDVFSIEADYIKRLFDERFGTVGHSLNLVNHLDTLEDTPLATATNLAQALKRIGRIMNPDEDVLFLYLTSHGGSDHKLAVEFWPLPLNDLSPEQLKAMLDQAGIKWRVVVVSACYSGTFVDALKGPHTLVATAAAHDRTSFGCGSESDFTYFGEAVFKQQLQSRFSLIPAFKAAAASIAERERWEKLEASRPQLWVGKPMEAHLADL 449          
BLAST of mRNA_P-wetherbeei_contig15377.1.1 vs. uniprot
Match: V2VKK5_9GAMM (Uncharacterized protein n=37 Tax=Gammaproteobacteria TaxID=1236 RepID=V2VKK5_9GAMM)

HSP 1 Score: 212 bits (540), Expect = 6.890e-62
Identity = 116/283 (40.99%), Postives = 171/283 (60.42%), Query Frame = 1
Query:   76 LVSLAALFALTIAALPGIPARAQGQPQREQRPPRPLIDYEAVLYRQPQLIEDTMAGIHASNPDAPSTYFVGFSAFSEQDVFLREIAQAREIVDERFGTRDRSLLLVNHILALDEVPLATITNLDIILTRLGRIMHPQKDTLILFLTSHGIENLFAIEFPPFPINHLTPPRLAEILDKSGINNRIVIISACHSGSFIPALKHPGTIVMTASRADRASFGCSNEADWTFFGNALFNHGLRTGKSLTDAFAAAKILIAGWEAKERFVPSEPQIFVGAEAGSMLARL 924
            L+ LA LF L +  +       + QP  +     P    EA  Y Q +++   +  I          YF+G +  S QDVF+ E+ + RE  D RFGT  RS++LVN+ +  +  P+A+ T++++ L R+G+ M+P+ D L L++TSHG+ N F +E  P  +  + P  L + LDKSGI  R+++ISAC+SGSF+ AL++  T+V+TAS ADRASFGCSNEAD+T+FG A F+  +R   S  +AFA AK+ +A WE  + F PSEPQ  +G     ML +L
Sbjct:  148 LIVLATLFTLVVWQM-----SVKSQPIWKVEEVPPTFSEEA-FYAQSKILNQALEKIQYGEFAQSHWYFLGVAGASYQDVFMSEVERIREQFDTRFGTFGRSMILVNNPMTRNVTPIASRTSMELALRRIGQQMNPESDVLFLYMTSHGLPNQFEMENAPLELQQVDPKWLRDALDKSGIRWRVIVISACYSGSFVSALQNDNTLVITASAADRASFGCSNEADYTYFGRAFFDQAMRENNSFAEAFAQAKLTVAKWEQAQGFEPSEPQWSMGKNMQLMLPQL 424          
BLAST of mRNA_P-wetherbeei_contig15377.1.1 vs. uniprot
Match: UPI001924838A (hypothetical protein n=1 Tax=Methylomicrobium sp. RS1 TaxID=2802053 RepID=UPI001924838A)

HSP 1 Score: 213 bits (541), Expect = 8.310e-62
Identity = 111/248 (44.76%), Postives = 159/248 (64.11%), Query Frame = 1
Query:  184 IDYEAVLYRQPQLIEDTMAGIHASNPDAPSTYFVGFSAFSEQDVFLREIAQAREIVDERFGTRDRSLLLVNHILALDEVPLATITNLDIILTRLGRIMHPQKDTLILFLTSHGI-ENLFAIEFPPFPINHLTPPRLAEILDKSGINNRIVIISACHSGSFIPALKHPGTIVMTASRADRASFGCSNEADWTFFGNALFNHGLRTGKSLTDAFAAAKILIAGWEAKERFVPSEPQIFVGAEAGSMLARL 924
            +D EA+LYRQP L+   ++ +          ++VGF+ F+ +DVF  E    + + DERFGT   SL LVNH+  + E PLAT TNL  +L R+G+IM P +D L L+LTSHG  ++  A+EF P P+N +TP  L  +LD++GI  R++++SAC+SG F+ AL+ P T+V TA+ ADR SFGC  E+D+T+FG A+F   L++  SL  AF AA   IA  E +E+   S PQ++VG    + LA L
Sbjct:  202 LDAEALLYRQPALLSGALSKLRPQRKRHVDLFYVGFAGFATEDVFSIETDYIKRLFDERFGTAGHSLNLVNHLNTIAETPLATATNLAAVLKRVGKIMDPDEDVLFLYLTSHGDKDHRLAVEFWPLPLNDITPGGLKAMLDEAGIKWRVIVVSACYSGGFVEALQGPNTLVATAAAADRTSFGCGAESDFTYFGEAVFKEQLQSRFSLIPAFKAAAASIAERERREKLEASRPQLWVGKPMEAHLADL 449          
BLAST of mRNA_P-wetherbeei_contig15377.1.1 vs. uniprot
Match: A0A3B1A9L2_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1A9L2_9ZZZZ)

HSP 1 Score: 215 bits (547), Expect = 8.540e-62
Identity = 114/259 (44.02%), Postives = 163/259 (62.93%), Query Frame = 1
Query:  184 IDYEAVLYRQPQLIEDTMAGIHASNPDAPSTYFVGFSAFSEQDVFLREIAQAREIVDERFGTRDRSLLLVNHILALDEVPLATITNLDIILTRLGRIMHPQKDTLILFLTSHGIENL-FAIEFPPFPINHLTPPRLAEILDKSGINNRIVIISACHSGSFIPALKHPGTIVMTASRADRASFGCSNEADWTFFGNALFNHGLRTGKSLTDAFAAAKILIAGWEAKERFVPSEPQIFVGAEAGSMLARLPIRPAVETATT 957
            +D E + Y QP L+E T+  I  S P     YFVGF+A+  QDVF++E   A+ + D++F TR RS  L+N+   +D+ PLA+ITNL ++L  +   M  ++D L L+LTSHG +     +     P+N L+P +L E+LD SGI  ++V++S+C+SG FI  LK   T+VMTAS  +R SFGCS+EAD+T+F  ALF H +    S  +AFA A  L+  WEAKE++  SEPQI+   E  + L  L  R AV+ AT+
Sbjct:  301 VDAETIFYNQPDLLETTLEKIKPSEPGKRELYFVGFAAYGYQDVFMKETRYAKRLFDKQFLTRGRSTTLINNHSIVDKTPLASITNLKLLLADVANKMDTEEDILFLYLTSHGSKKKGLDVSLRGLPLNDLSPKKLDELLDNSGIKWKVVVVSSCYSGGFIDELKDDYTLVMTASGKNRRSFGCSDEADFTYFARALFKHAIPDTDSFIEAFAKANQLVTEWEAKEKYTHSEPQIWAAEEISNHL--LQWRSAVDMATS 557          
BLAST of mRNA_P-wetherbeei_contig15377.1.1 vs. uniprot
Match: R9AYN0_9GAMM (Uncharacterized protein n=12 Tax=Acinetobacter TaxID=469 RepID=R9AYN0_9GAMM)

HSP 1 Score: 211 bits (538), Expect = 1.470e-61
Identity = 110/255 (43.14%), Postives = 160/255 (62.75%), Query Frame = 1
Query:  193 EAVLYRQPQLIEDTMAGIHASNPDAPSTYFVGFSAFSEQDVFLREIAQAREIVDERFGTRDRSLLLVNHILALDEVPLATITNLDIILTRLGRIMHPQKDTLILFLTSHGIENLFAIEFPPFPINHLTPPRLAEILDKSGINNRIVIISACHSGSFIPALKHPGTIVMTASRADRASFGCSNEADWTFFGNALFNHGLRTGKSLTDAFAAAKILIAGWEAKERFVPSEPQIFVGAEAGSMLARLPIRPAVETATT 957
            E   Y Q +L+   +  I          YF+G +  S QDVF+ E+ + RE  D RFGT  RS++LVN+     E+P+A+ T++++ L R+G+ M+ + D L L++TSHG++N F +E  P  +  + P  L + LD+SGI  R+++ISAC+SGSF+ AL++  T+++TAS ADRASFGCSNEAD+T+FG A F+  +R   S+ DAFA AK  +A WE  + F PSEPQ  +G     ML +L  R    T TT
Sbjct:  184 EDAFYAQSRLLNKNLQAIEYGEFAQSHWYFLGVAGASYQDVFMSEVKRIREQFDTRFGTFGRSMILVNNPATRTEIPIASRTSMELSLKRIGQQMNRESDVLFLYMTSHGLQNEFEMENAPLDLAQVDPKWLRDALDRSGIRWRVIVISACYSGSFVSALQNDNTLIITASAADRASFGCSNEADYTYFGRAFFDQAMREQHSIKDAFAQAKDTVAQWETAQGFDPSEPQWSIGKNMELMLPQLEQRLFPPTTTT 438          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15377.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C4TTX5_9HYPH1.450e-8150.82Uncharacterized protein n=1 Tax=Hyphomicrobiales b... [more]
A0A833FYE2_9HYPH2.850e-7241.49Uncharacterized protein n=1 Tax=Hyphomicrobiaceae ... [more]
A0A2N2AFH8_9GAMM3.450e-6743.32CASPASE_P20 domain-containing protein n=1 Tax=Gamm... [more]
UPI00045E7D172.450e-6445.16caspase family protein n=1 Tax=Methylomicrobium la... [more]
UPI00068F071D3.810e-6443.32hypothetical protein n=1 Tax=Nevskia soli TaxID=41... [more]
H8GL39_METAL4.200e-6244.76Peptidase C13 family n=2 Tax=Methylomicrobium TaxI... [more]
V2VKK5_9GAMM6.890e-6240.99Uncharacterized protein n=37 Tax=Gammaproteobacter... [more]
UPI001924838A8.310e-6244.76hypothetical protein n=1 Tax=Methylomicrobium sp. ... [more]
A0A3B1A9L2_9ZZZZ8.540e-6244.02Uncharacterized protein n=1 Tax=hydrothermal vent ... [more]
R9AYN0_9GAMM1.470e-6143.14Uncharacterized protein n=12 Tax=Acinetobacter Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15377contigP-wetherbeei_contig15377:560..1522 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1122604.JONR01000003_gene1505
PFAMsPeptidase_C13
Model size963
Max annot lvl135614|Xanthomonadales
Hectar predicted targeting categorysignal peptide
Exons1
Evalue6.24e-65
EggNOG OGsCOG4642@1|root,COG4642@2|Bacteria,1P07C@1224|Proteobacteria,1T4GU@1236|Gammaproteobacteria,1XDAQ@135614|Xanthomonadales
DescriptionPeptidase C13 family
Cds size963
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186053.7523882-CDS-P-wetherbeei_contig15377:559..15221683186053.7523882-CDS-P-wetherbeei_contig15377:559..1522Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15377 560..1522 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15377.1.1prot_P-wetherbeei_contig15377.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15377 560..1522 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15377.1.1

>prot_P-wetherbeei_contig15377.1.1 ID=prot_P-wetherbeei_contig15377.1.1|Name=mRNA_P-wetherbeei_contig15377.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=321bp
RVLPLLEADRLTFASGVRRTRRAAVLVSLAALFALTIAALPGIPARAQGQ
PQREQRPPRPLIDYEAVLYRQPQLIEDTMAGIHASNPDAPSTYFVGFSAF
SEQDVFLREIAQAREIVDERFGTRDRSLLLVNHILALDEVPLATITNLDI
ILTRLGRIMHPQKDTLILFLTSHGIENLFAIEFPPFPINHLTPPRLAEIL
DKSGINNRIVIISACHSGSFIPALKHPGTIVMTASRADRASFGCSNEADW
TFFGNALFNHGLRTGKSLTDAFAAAKILIAGWEAKERFVPSEPQIFVGAE
AGSMLARLPIRPAVETATTK*
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mRNA from alignment at P-wetherbeei_contig15377:560..1522+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15377.1.1 ID=mRNA_P-wetherbeei_contig15377.1.1|Name=mRNA_P-wetherbeei_contig15377.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=963bp|location=Sequence derived from alignment at P-wetherbeei_contig15377:560..1522+ (Phaeothamnion wetherbeei SAG_119_79)
AGAGTCCTGCCGCTGCTGGAGGCTGATCGATTGACGTTCGCAAGTGGAGT ACGAAGGACGCGGCGAGCTGCGGTTCTGGTATCGCTGGCCGCGCTCTTCG CACTGACGATTGCGGCACTGCCCGGCATTCCCGCGCGCGCCCAAGGCCAG CCCCAGCGCGAGCAGCGCCCGCCCCGTCCGTTGATCGACTACGAGGCCGT GCTCTACCGGCAGCCGCAGCTCATCGAAGACACGATGGCGGGTATCCATG CCTCCAACCCCGACGCGCCCAGCACCTACTTCGTCGGATTTTCCGCATTC TCCGAGCAGGACGTGTTCCTGCGCGAGATCGCCCAGGCGCGCGAGATCGT CGATGAACGGTTCGGCACGCGCGACCGGTCGCTGCTGCTTGTCAATCACA TCCTGGCGCTCGATGAGGTTCCCCTCGCGACCATCACCAACCTCGACATC ATCCTGACCAGGCTCGGGCGGATCATGCACCCGCAGAAGGATACACTCAT CCTTTTCCTGACTTCGCATGGCATCGAGAACCTGTTCGCCATCGAATTCC CGCCGTTTCCGATCAATCACCTGACGCCGCCGAGACTGGCCGAGATCCTC GACAAATCCGGGATAAATAACCGCATCGTGATCATTTCGGCGTGCCATTC GGGAAGTTTCATCCCCGCCCTCAAGCACCCCGGCACTATCGTGATGACGG CGTCACGCGCCGACCGCGCCTCGTTCGGATGCAGCAACGAGGCCGATTGG ACATTCTTCGGCAATGCGTTGTTCAATCATGGCTTGCGAACGGGCAAATC GCTCACCGACGCATTCGCCGCTGCCAAGATTCTGATTGCCGGCTGGGAGG CCAAGGAACGATTCGTGCCGTCGGAGCCGCAAATATTTGTCGGTGCGGAG GCGGGTTCCATGCTGGCGCGACTGCCGATACGGCCGGCAGTGGAAACTGC AACCACCAAGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15377:560..1522+

>mRNA_P-wetherbeei_contig15377.1.1 ID=mRNA_P-wetherbeei_contig15377.1.1|Name=mRNA_P-wetherbeei_contig15377.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=963bp|location=Sequence derived from alignment at P-wetherbeei_contig15377:560..1522+ (Phaeothamnion wetherbeei SAG_119_79)
AGAGTCCTGCCGCTGCTGGAGGCTGATCGATTGACGTTCGCAAGTGGAGT
ACGAAGGACGCGGCGAGCTGCGGTTCTGGTATCGCTGGCCGCGCTCTTCG
CACTGACGATTGCGGCACTGCCCGGCATTCCCGCGCGCGCCCAAGGCCAG
CCCCAGCGCGAGCAGCGCCCGCCCCGTCCGTTGATCGACTACGAGGCCGT
GCTCTACCGGCAGCCGCAGCTCATCGAAGACACGATGGCGGGTATCCATG
CCTCCAACCCCGACGCGCCCAGCACCTACTTCGTCGGATTTTCCGCATTC
TCCGAGCAGGACGTGTTCCTGCGCGAGATCGCCCAGGCGCGCGAGATCGT
CGATGAACGGTTCGGCACGCGCGACCGGTCGCTGCTGCTTGTCAATCACA
TCCTGGCGCTCGATGAGGTTCCCCTCGCGACCATCACCAACCTCGACATC
ATCCTGACCAGGCTCGGGCGGATCATGCACCCGCAGAAGGATACACTCAT
CCTTTTCCTGACTTCGCATGGCATCGAGAACCTGTTCGCCATCGAATTCC
CGCCGTTTCCGATCAATCACCTGACGCCGCCGAGACTGGCCGAGATCCTC
GACAAATCCGGGATAAATAACCGCATCGTGATCATTTCGGCGTGCCATTC
GGGAAGTTTCATCCCCGCCCTCAAGCACCCCGGCACTATCGTGATGACGG
CGTCACGCGCCGACCGCGCCTCGTTCGGATGCAGCAACGAGGCCGATTGG
ACATTCTTCGGCAATGCGTTGTTCAATCATGGCTTGCGAACGGGCAAATC
GCTCACCGACGCATTCGCCGCTGCCAAGATTCTGATTGCCGGCTGGGAGG
CCAAGGAACGATTCGTGCCGTCGGAGCCGCAAATATTTGTCGGTGCGGAG
GCGGGTTCCATGCTGGCGCGACTGCCGATACGGCCGGCAGTGGAAACTGC
AACCACCAAGTAG
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