mRNA_P-wetherbeei_contig15349.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15349.3.1
Unique NamemRNA_P-wetherbeei_contig15349.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15349.3.1 vs. uniprot
Match: A0A6I3EZW8_9ACTN (Molybdenum cofactor biosynthesis protein MoaE n=2 Tax=root TaxID=1 RepID=A0A6I3EZW8_9ACTN)

HSP 1 Score: 270 bits (689), Expect = 5.440e-90
Identity = 129/172 (75.00%), Postives = 142/172 (82.56%), Query Frame = 1
Query:   10 WWSKGEGLRCRIVQPPASGDSWLGLADEALPVAGAYEWAVLPTCGAVVLFSGTVRDHALDESGQMRSDVTSLTYEAYESQVVPSFAAIEAEMRRRWPHTGRVALLHRTGRLELGESSVLAVVSAPHRPEAFEAARYAIDALKASAPIWKHEEWEAGSDWGTGAHVPVDPSEV 525
            WW     L   +VQPPA+G+SWLGL D+ LP+A AYEW VLP CGAVVLFSGTVRDHA+DE G+ R DV  LTYEAY+ QVVP+FAAIE E+RRRWP TGRV LLHRTGRL L ESSV+AVVSAPHRPEAFEAARYAIDALKASAPIWKHE W  G+DWGTGAH PV P+ V
Sbjct:    6 WWRVQSRLPWAVVQPPANGNSWLGLTDQVLPIAAAYEWCVLPGCGAVVLFSGTVRDHAVDEHGETRDDVQYLTYEAYDEQVVPAFAAIELELRRRWPDTGRVVLLHRTGRLGLSESSVVAVVSAPHRPEAFEAARYAIDALKASAPIWKHEVWADGADWGTGAHTPVSPTAV 177          
BLAST of mRNA_P-wetherbeei_contig15349.3.1 vs. uniprot
Match: A0A3C2B5X3_9ACTN (Molybdopterin synthase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B5X3_9ACTN)

HSP 1 Score: 266 bits (680), Expect = 4.030e-88
Identity = 126/177 (71.19%), Postives = 142/177 (80.23%), Query Frame = 1
Query:    1 VAKWWSKGEGLRCRIVQPPASGDSWLGLADEALPVAGAYEWAVLPTCGAVVLFSGTVRDHALDESGQMRSDVTSLTYEAYESQVVPSFAAIEAEMRRRWPHTGRVALLHRTGRLELGESSVLAVVSAPHRPEAFEAARYAIDALKASAPIWKHEEWEAGSDWGTGAHVPVDPSEVPS 531
            + +W  +   L C +VQPPASG SWLG    ALP+  AYEW V P CGAVVLFSGTVRDHA DE+G MR+ V  L+YEAY+ QVVP FAAIEAE+R RWPHTGRV +LHRTGRLE+GESSV+ VVSAPHRPEAFEAAR+AIDALKASAPIWKHE W  G  WGTGAH PV P+EVP+
Sbjct:   32 LGRWQRRSRRLPCHVVQPPASGSSWLGCGAGALPIGPAYEWCVQPGCGAVVLFSGTVRDHATDEAGVMRTGVQHLSYEAYDEQVVPRFAAIEAELRTRWPHTGRVVMLHRTGRLEVGESSVVVVVSAPHRPEAFEAARFAIDALKASAPIWKHEVWADGEGWGTGAHAPVSPAEVPT 208          
BLAST of mRNA_P-wetherbeei_contig15349.3.1 vs. uniprot
Match: A0A7X9Q3C5_9ACTN (Molybdenum cofactor biosynthesis protein MoaE n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A7X9Q3C5_9ACTN)

HSP 1 Score: 238 bits (608), Expect = 4.870e-78
Identity = 114/152 (75.00%), Postives = 127/152 (83.55%), Query Frame = 1
Query:   76 LGLADEALPVAGAYEWAVLPTCGAVVLFSGTVRDHALDESGQMRSDVTSLTYEAYESQVVPSFAAIEAEMRRRWPHTGRVALLHRTGRLELGESSVLAVVSAPHRPEAFEAARYAIDALKASAPIWKHEEWEAGSDWGTGAHVPVDPSEVPS 531
            +GL D+ LPV  AYEW V P CGAVVLFSGTVRDHA D+ G +R+DV+ LTYEAY+ QVVP+F AIEAE+R RWP  GR+ LLHRTGRL L ESSVLAVVSAPHRPEAFEAAR+AIDALKASAPIWKHEEW  G+DWGTGAH PV P  VP+
Sbjct:    1 MGLTDQVLPVGTAYEWCVQPQCGAVVLFSGTVRDHAADQQGNLRADVSHLTYEAYDEQVVPAFEAIEAELRHRWPTAGRIVLLHRTGRLALMESSVLAVVSAPHRPEAFEAARFAIDALKASAPIWKHEEWADGADWGTGAHAPVAPQAVPT 152          
BLAST of mRNA_P-wetherbeei_contig15349.3.1 vs. uniprot
Match: A0A539E8B1_9ACTN (Molybdopterin synthase large subunit MoaE n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539E8B1_9ACTN)

HSP 1 Score: 234 bits (596), Expect = 1.050e-75
Identity = 115/164 (70.12%), Postives = 130/164 (79.27%), Query Frame = 1
Query:   43 IVQPPASGDSWLGLADEALPVAGAYEWAVLPTCGAVVLFSGTVRDHALDESGQMRSDVTSLTYEAYESQVVPSFAAIEAEMRRRWPHTGRVALLHRTGRLELGESSVLAVVSAPHRPEAFEAARYAIDALKASAPIWKHEEW-EAGSDWGTGAHVPVDPSEVPS 531
             VQPP S D+W+G+ D  LP+A AYEW V+P CGAVVLFSGTVRDHA+D  G MRSDV  L YEAY  QV PSF  I AE+RRRWP TGRV LLHR GRL++G+SSV+AVVSAPHRPEAFEAARYAIDALKASAPIWK E W ++ S WGT +   VDP+ VPS
Sbjct:   22 FVQPPESSDTWVGITDGELPLAAAYEWCVVPRCGAVVLFSGTVRDHAVDHDGAMRSDVQCLDYEAYGEQVEPSFTKIVAELRRRWPRTGRVVLLHRVGRLQVGDSSVIAVVSAPHRPEAFEAARYAIDALKASAPIWKRETWTDSSSAWGTKSQPLVDPASVPS 185          
BLAST of mRNA_P-wetherbeei_contig15349.3.1 vs. uniprot
Match: A0A6C7EB23_ILUCY (Molybdopterin synthase large subunit MoaE n=2 Tax=Ilumatobacter coccineus TaxID=467094 RepID=A0A6C7EB23_ILUCY)

HSP 1 Score: 229 bits (584), Expect = 3.060e-74
Identity = 113/160 (70.62%), Postives = 124/160 (77.50%), Query Frame = 1
Query:   46 VQPPASGDSWLGLADEALPVAGAYEWAVLPTCGAVVLFSGTVRDHALDESGQMRSDVTSLTYEAYESQVVPSFAAIEAEMRRRWPHTGRVALLHRTGRLELGESSVLAVVSAPHRPEAFEAARYAIDALKASAPIWKHEEWEAGSDWGTGAHVPVDPSEV 525
            V PP +GD+W G+  + LP+A AYEWAV P+CGAVVLFSGTVRDHA     + R DV  LTYEAY+ QVVP F  I AE+R RWP TGRV LLHRTGRLELGESSV+AVVS+PHRP AFEA RYAIDALK SAPIWKHE W  GSDWGT AH  VDP  V
Sbjct:   11 VTPPENGDNWFGVTADELPIAAAYEWAVRPSCGAVVLFSGTVRDHA-----EGRDDVQHLTYEAYDEQVVPVFERITAELRERWPDTGRVVLLHRTGRLELGESSVIAVVSSPHRPNAFEAGRYAIDALKESAPIWKHEVWADGSDWGTDAHTAVDPRSV 165          
BLAST of mRNA_P-wetherbeei_contig15349.3.1 vs. uniprot
Match: A0A6N2DT45_9ACTN (Molybdenum cofactor biosynthesis protein MoaE n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DT45_9ACTN)

HSP 1 Score: 227 bits (579), Expect = 2.010e-73
Identity = 114/167 (68.26%), Postives = 122/167 (73.05%), Query Frame = 1
Query:   31 LRCRIVQPPASGDSWLGLADEALPVAGAYEWAVLPTCGAVVLFSGTVRDHALDESGQMRSDVTSLTYEAYESQVVPSFAAIEAEMRRRWPHTGRVALLHRTGRLELGESSVLAVVSAPHRPEAFEAARYAIDALKASAPIWKHEEWEAGSDWGTGAHVPVDPSEVPS 531
            LR  +VQPP  G  WLGL D  LPV  AY W VLP CGAVVLFSGTVRDHA     + R  VT LTYEAY+ QVVP    I  E R RWP TGR+ LLHRTGRLELGESSVLAV SAPHRPEAF AAR+AIDALKA+ PIWKHE W  G+DWGTGA  P D + VPS
Sbjct:    5 LRWAVVQPPLDGQDWLGLTDAELPVGEAYHWTVLPGCGAVVLFSGTVRDHA-----EGRDGVTHLTYEAYDEQVVPRLREIAGETRARWPETGRLVLLHRTGRLELGESSVLAVASAPHRPEAFAAARFAIDALKATVPIWKHEVWADGADWGTGAAAPTDAASVPS 166          
BLAST of mRNA_P-wetherbeei_contig15349.3.1 vs. uniprot
Match: UPI00034B204F (molybdenum cofactor biosynthesis protein MoaE n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI00034B204F)

HSP 1 Score: 223 bits (569), Expect = 4.490e-72
Identity = 113/157 (71.97%), Postives = 122/157 (77.71%), Query Frame = 1
Query:   55 PASGDSWLGLADEALPVAGAYEWAVLPTCGAVVLFSGTVRDHALDESGQMRSDVTSLTYEAYESQVVPSFAAIEAEMRRRWPHTGRVALLHRTGRLELGESSVLAVVSAPHRPEAFEAARYAIDALKASAPIWKHEEWEAGSDWGTGAHVPVDPSEV 525
            P     WLG+ DE LP+A AY WAV+P CGAVVLFSGTVRDHA     + RSDV  LTYEAYE+QV P FA+I  E+R RWP TGRV LLHRTGRLEL ESSV+AVVSAPHRPEAFEAARYAIDALK SAPIWKHE W  GSDWGTGA+   DP  V
Sbjct:    7 PKDRRDWLGITDEELPIAEAYRWAVIPRCGAVVLFSGTVRDHA-----EGRSDVQHLTYEAYEAQVTPVFASIVDELRSRWPETGRVVLLHRTGRLELEESSVIAVVSAPHRPEAFEAARYAIDALKESAPIWKHEVWGEGSDWGTGANAITDPRNV 158          
BLAST of mRNA_P-wetherbeei_contig15349.3.1 vs. uniprot
Match: A0A7K1B5W3_9ACTN (Molybdenum cofactor biosynthesis protein MoaE n=2 Tax=root TaxID=1 RepID=A0A7K1B5W3_9ACTN)

HSP 1 Score: 223 bits (568), Expect = 1.900e-71
Identity = 110/168 (65.48%), Postives = 125/168 (74.40%), Query Frame = 1
Query:   40 RIVQPPASGDSWLGLADEALPVAGAYEWAVLPTCGAVVLFSGTVRDHALDESGQMRSDVTSLTYEAYESQVVPSFAAIEAEMRRRWPHTGRVALLHRTGRLELGESSVLAVVSAPHRPEAFEAARYAIDALKASAPIWKHEEWEAGSD----WGTGAHVPVDPSEVPS 531
            R+V PP   D+W+ L  + LP+  AY+WAV P+CGAVVLFSGTVRDHA+D+ G MR+DV  L YEAYE   +  F  I  E+R RWPHTGRVALLHR GRLELG+SSV+AVVSAPHRPEAF AARYAIDALKASAPIWK E W  G      WG GA  PVDP  VP+
Sbjct:    2 RVVLPPDRSDTWVALGTDELPIGAAYDWAVRPSCGAVVLFSGTVRDHAVDDDGVMRTDVEHLEYEAYEDACIDVFRRIVDEVRARWPHTGRVALLHRLGRLELGDSSVVAVVSAPHRPEAFAAARYAIDALKASAPIWKRETWRDGDTATAAWGVGASAPVDPVAVPT 169          
BLAST of mRNA_P-wetherbeei_contig15349.3.1 vs. uniprot
Match: A0A094PPR6_9ACTN (Uncharacterized protein n=4 Tax=root TaxID=1 RepID=A0A094PPR6_9ACTN)

HSP 1 Score: 215 bits (547), Expect = 2.340e-68
Identity = 105/157 (66.88%), Postives = 122/157 (77.71%), Query Frame = 1
Query:   61 SGDSWLGLADEALPVAGAYEWAVLPTCGAVVLFSGTVRDHALDESGQMRSDVTSLTYEAYESQVVPSFAAIEAEMRRRWPHTGRVALLHRTGRLELGESSVLAVVSAPHRPEAFEAARYAIDALKASAPIWKHEEWEAGSDWGTGAHVPVDPSEVPS 531
            S D W  + DE L V   Y+WAV P CGAVV+FSGTVRDHA+ E G++RS V  L+YEAY  +V+P F AI  E R+RW   GR AL+HR GR+ELGESSV+AVVSAPHRPEAFEAAR+AIDALK+SAPIWKHE W+ GSDWGTGA  PVD S+V S
Sbjct:   26 SADEWFAITDEPLSVGELYDWAVRPDCGAVVIFSGTVRDHAV-EDGELRSGVEFLSYEAYAEEVIPRFRAIAVEARQRWNDLGRFALVHRVGRIELGESSVIAVVSAPHRPEAFEAARFAIDALKSSAPIWKHETWDGGSDWGTGATAPVDASQVRS 181          
BLAST of mRNA_P-wetherbeei_contig15349.3.1 vs. uniprot
Match: A0A6I3X313_9ACTN (Molybdenum cofactor biosynthesis protein MoaE n=2 Tax=root TaxID=1 RepID=A0A6I3X313_9ACTN)

HSP 1 Score: 214 bits (545), Expect = 2.890e-68
Identity = 107/167 (64.07%), Postives = 121/167 (72.46%), Query Frame = 1
Query:   31 LRCRIVQPPASGDSWLGLADEALPVAGAYEWAVLPTCGAVVLFSGTVRDHALDESGQMRSDVTSLTYEAYESQVVPSFAAIEAEMRRRWPHTGRVALLHRTGRLELGESSVLAVVSAPHRPEAFEAARYAIDALKASAPIWKHEEWEAGSDWGTGAHVPVDPSEVPS 531
            LRC  +  P  G++W+G+  + LP+A AYEWAV   CGAVVLFSGTVRDHA     + RS V  LTYEAY+ Q       I  ++R RWP TGRV LLHRTGRLE+GESSV+ VVS+PHRPEAFEA RYAIDALKAS PIWKHE W  GSDWGTGAH  V P  VPS
Sbjct:    6 LRCVTMHAPTLGNTWVGITADTLPIAAAYEWAVRDDCGAVVLFSGTVRDHA-----EGRSGVQHLTYEAYDEQAPIKMHEIADQVRERWPDTGRVVLLHRTGRLEIGESSVIVVVSSPHRPEAFEAGRYAIDALKASVPIWKHEVWADGSDWGTGAHDVVPPDAVPS 167          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15349.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I3EZW8_9ACTN5.440e-9075.00Molybdenum cofactor biosynthesis protein MoaE n=2 ... [more]
A0A3C2B5X3_9ACTN4.030e-8871.19Molybdopterin synthase n=1 Tax=Acidimicrobiaceae b... [more]
A0A7X9Q3C5_9ACTN4.870e-7875.00Molybdenum cofactor biosynthesis protein MoaE n=2 ... [more]
A0A539E8B1_9ACTN1.050e-7570.12Molybdopterin synthase large subunit MoaE n=1 Tax=... [more]
A0A6C7EB23_ILUCY3.060e-7470.63Molybdopterin synthase large subunit MoaE n=2 Tax=... [more]
A0A6N2DT45_9ACTN2.010e-7368.26Molybdenum cofactor biosynthesis protein MoaE n=1 ... [more]
UPI00034B204F4.490e-7271.97molybdenum cofactor biosynthesis protein MoaE n=1 ... [more]
A0A7K1B5W3_9ACTN1.900e-7165.48Molybdenum cofactor biosynthesis protein MoaE n=2 ... [more]
A0A094PPR6_9ACTN2.340e-6866.88Uncharacterized protein n=4 Tax=root TaxID=1 RepID... [more]
A0A6I3X313_9ACTN2.890e-6864.07Molybdenum cofactor biosynthesis protein MoaE n=2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15349contigP-wetherbeei_contig15349:1076..1618 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1313172.YM304_09020
PFAMsMoaE
Model size543
Max annot lvl84992|Acidimicrobiia
KEGG rclassRC02507
KEGG koko:K03635
KEGG ReactionR09395
KEGG Pathwayko00790,ko01100,ko04122,map00790,map01100,map04122
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.01e-75
EggNOG OGsCOG0314@1|root,COG0314@2|Bacteria,2HG21@201174|Actinobacteria,4CN80@84992|Acidimicrobiia
EC2.8.1.12
DescriptionMoaE protein
Cds size543
COG categoryH
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186052.8755035-CDS-P-wetherbeei_contig15349:1075..16181683186052.8755035-CDS-P-wetherbeei_contig15349:1075..1618Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15349 1076..1618 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15349.3.1prot_P-wetherbeei_contig15349.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15349 1076..1618 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15349.3.1

>prot_P-wetherbeei_contig15349.3.1 ID=prot_P-wetherbeei_contig15349.3.1|Name=mRNA_P-wetherbeei_contig15349.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=181bp
VAKWWSKGEGLRCRIVQPPASGDSWLGLADEALPVAGAYEWAVLPTCGAV
VLFSGTVRDHALDESGQMRSDVTSLTYEAYESQVVPSFAAIEAEMRRRWP
HTGRVALLHRTGRLELGESSVLAVVSAPHRPEAFEAARYAIDALKASAPI
WKHEEWEAGSDWGTGAHVPVDPSEVPSWVS*
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mRNA from alignment at P-wetherbeei_contig15349:1076..1618-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15349.3.1 ID=mRNA_P-wetherbeei_contig15349.3.1|Name=mRNA_P-wetherbeei_contig15349.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=543bp|location=Sequence derived from alignment at P-wetherbeei_contig15349:1076..1618- (Phaeothamnion wetherbeei SAG_119_79)
GTGGCCAAGTGGTGGTCGAAGGGCGAGGGGCTACGATGCCGCATCGTGCA ACCCCCCGCTTCCGGCGATTCCTGGCTCGGCCTCGCCGACGAGGCGCTTC CGGTCGCGGGCGCCTACGAATGGGCGGTGTTGCCCACGTGTGGTGCGGTG GTGCTCTTCAGTGGCACTGTGCGCGATCACGCCCTCGACGAGAGCGGTCA GATGCGCAGTGACGTCACCAGCCTCACGTACGAGGCCTACGAGAGCCAGG TGGTTCCGTCGTTCGCCGCGATCGAAGCAGAGATGCGTCGGCGTTGGCCC CACACCGGCCGGGTCGCGCTGCTCCATCGCACCGGTCGCCTCGAGCTGGG TGAGAGCTCGGTGCTCGCCGTCGTGTCGGCCCCGCATCGTCCCGAGGCGT TCGAAGCGGCGCGCTACGCCATCGACGCCTTGAAGGCGTCGGCGCCGATC TGGAAGCACGAGGAGTGGGAAGCCGGCAGCGATTGGGGCACCGGTGCGCA CGTGCCGGTCGACCCGTCGGAGGTGCCGTCGTGGGTGTCGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15349:1076..1618-

>mRNA_P-wetherbeei_contig15349.3.1 ID=mRNA_P-wetherbeei_contig15349.3.1|Name=mRNA_P-wetherbeei_contig15349.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=543bp|location=Sequence derived from alignment at P-wetherbeei_contig15349:1076..1618- (Phaeothamnion wetherbeei SAG_119_79)
GTGGCCAAGTGGTGGTCGAAGGGCGAGGGGCTACGATGCCGCATCGTGCA
ACCCCCCGCTTCCGGCGATTCCTGGCTCGGCCTCGCCGACGAGGCGCTTC
CGGTCGCGGGCGCCTACGAATGGGCGGTGTTGCCCACGTGTGGTGCGGTG
GTGCTCTTCAGTGGCACTGTGCGCGATCACGCCCTCGACGAGAGCGGTCA
GATGCGCAGTGACGTCACCAGCCTCACGTACGAGGCCTACGAGAGCCAGG
TGGTTCCGTCGTTCGCCGCGATCGAAGCAGAGATGCGTCGGCGTTGGCCC
CACACCGGCCGGGTCGCGCTGCTCCATCGCACCGGTCGCCTCGAGCTGGG
TGAGAGCTCGGTGCTCGCCGTCGTGTCGGCCCCGCATCGTCCCGAGGCGT
TCGAAGCGGCGCGCTACGCCATCGACGCCTTGAAGGCGTCGGCGCCGATC
TGGAAGCACGAGGAGTGGGAAGCCGGCAGCGATTGGGGCACCGGTGCGCA
CGTGCCGGTCGACCCGTCGGAGGTGCCGTCGTGGGTGTCGTGA
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